Ronja M. Steinbach , Fouad El Baidouri , Lorna M.Y. Mitchison-Field , Fang Yun Lim , Joanne Ekena , Ellysa J.D. Vogt , Amy Gladfelter , Ashleigh B. Theberge , Anthony S. Amend
{"title":"Malassezia is widespread and has undescribed diversity in the marine environment","authors":"Ronja M. Steinbach , Fouad El Baidouri , Lorna M.Y. Mitchison-Field , Fang Yun Lim , Joanne Ekena , Ellysa J.D. Vogt , Amy Gladfelter , Ashleigh B. Theberge , Anthony S. Amend","doi":"10.1016/j.funeco.2023.101273","DOIUrl":null,"url":null,"abstract":"<div><p>There is substantial fungal diversity in marine environments where uncharacterized species may play important ecological roles. <em>Malassezia</em>, a genus of yeast generally associated with mammalian skins, is an example of a seemingly abundant marine fungus in ocean environments. Accumulating evidence indicates that <em>Malassezia</em> is widespread in the ocean. However, we know little about its diversity, role, and distribution. To address these gaps in our knowledge, we analyzed 127 marine samples collected from marine rocks, sediment, water, and various organisms, from the coasts of Hawaiʻi, Washington, and Massachusetts. We then used <em>Malassezia</em>-specific 28S primers in a nested PCR approach to amplify all present <em>Malassezia</em>, and performed Illumina sequencing from which we generated a possible phylogeny. Based on our phylogenetic results, we circumscribed 20 potentially novel clades that might represent new species. Our findings are consistent with <em>Malassezia</em> having substantial novel diversity and a high prevalence in the marine environment.</p></div>","PeriodicalId":55136,"journal":{"name":"Fungal Ecology","volume":"65 ","pages":"Article 101273"},"PeriodicalIF":1.9000,"publicationDate":"2023-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Fungal Ecology","FirstCategoryId":"93","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1754504823000508","RegionNum":3,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"ECOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
There is substantial fungal diversity in marine environments where uncharacterized species may play important ecological roles. Malassezia, a genus of yeast generally associated with mammalian skins, is an example of a seemingly abundant marine fungus in ocean environments. Accumulating evidence indicates that Malassezia is widespread in the ocean. However, we know little about its diversity, role, and distribution. To address these gaps in our knowledge, we analyzed 127 marine samples collected from marine rocks, sediment, water, and various organisms, from the coasts of Hawaiʻi, Washington, and Massachusetts. We then used Malassezia-specific 28S primers in a nested PCR approach to amplify all present Malassezia, and performed Illumina sequencing from which we generated a possible phylogeny. Based on our phylogenetic results, we circumscribed 20 potentially novel clades that might represent new species. Our findings are consistent with Malassezia having substantial novel diversity and a high prevalence in the marine environment.
期刊介绍:
Fungal Ecology publishes investigations into all aspects of fungal ecology, including the following (not exclusive): population dynamics; adaptation; evolution; role in ecosystem functioning, nutrient cycling, decomposition, carbon allocation; ecophysiology; intra- and inter-specific mycelial interactions, fungus-plant (pathogens, mycorrhizas, lichens, endophytes), fungus-invertebrate and fungus-microbe interaction; genomics and (evolutionary) genetics; conservation and biodiversity; remote sensing; bioremediation and biodegradation; quantitative and computational aspects - modelling, indicators, complexity, informatics. The usual prerequisites for publication will be originality, clarity, and significance as relevant to a better understanding of the ecology of fungi.