Malassezia is widespread and has undescribed diversity in the marine environment

IF 1.9 3区 环境科学与生态学 Q3 ECOLOGY Fungal Ecology Pub Date : 2023-10-01 DOI:10.1016/j.funeco.2023.101273
Ronja M. Steinbach , Fouad El Baidouri , Lorna M.Y. Mitchison-Field , Fang Yun Lim , Joanne Ekena , Ellysa J.D. Vogt , Amy Gladfelter , Ashleigh B. Theberge , Anthony S. Amend
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Abstract

There is substantial fungal diversity in marine environments where uncharacterized species may play important ecological roles. Malassezia, a genus of yeast generally associated with mammalian skins, is an example of a seemingly abundant marine fungus in ocean environments. Accumulating evidence indicates that Malassezia is widespread in the ocean. However, we know little about its diversity, role, and distribution. To address these gaps in our knowledge, we analyzed 127 marine samples collected from marine rocks, sediment, water, and various organisms, from the coasts of Hawaiʻi, Washington, and Massachusetts. We then used Malassezia-specific 28S primers in a nested PCR approach to amplify all present Malassezia, and performed Illumina sequencing from which we generated a possible phylogeny. Based on our phylogenetic results, we circumscribed 20 potentially novel clades that might represent new species. Our findings are consistent with Malassezia having substantial novel diversity and a high prevalence in the marine environment.

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马拉色菌分布广泛,在海洋环境中具有未描述的多样性
海洋环境中存在大量真菌多样性,在这些环境中,不具特征的物种可能发挥重要的生态作用。马拉色菌是一个通常与哺乳动物皮肤有关的酵母属,是海洋环境中看似丰富的海洋真菌的一个例子。越来越多的证据表明马拉色菌在海洋中广泛分布。然而,我们对其多样性、作用和分布知之甚少。为了弥补我们知识上的这些空白,我们分析了从夏威夷、华盛顿和马萨诸塞州海岸的海洋岩石、沉积物、水和各种生物中采集的127个海洋样本。然后,我们在嵌套PCR方法中使用马拉色菌特异性28S引物来扩增所有存在的马拉色藻,并进行Illumina测序,由此我们产生了可能的系统发育。根据我们的系统发育结果,我们确定了20个可能代表新物种的潜在新分支。我们的发现与马拉色菌在海洋环境中具有大量新的多样性和高流行率是一致的。
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来源期刊
Fungal Ecology
Fungal Ecology 环境科学-生态学
CiteScore
5.80
自引率
3.40%
发文量
51
审稿时长
3 months
期刊介绍: Fungal Ecology publishes investigations into all aspects of fungal ecology, including the following (not exclusive): population dynamics; adaptation; evolution; role in ecosystem functioning, nutrient cycling, decomposition, carbon allocation; ecophysiology; intra- and inter-specific mycelial interactions, fungus-plant (pathogens, mycorrhizas, lichens, endophytes), fungus-invertebrate and fungus-microbe interaction; genomics and (evolutionary) genetics; conservation and biodiversity; remote sensing; bioremediation and biodegradation; quantitative and computational aspects - modelling, indicators, complexity, informatics. The usual prerequisites for publication will be originality, clarity, and significance as relevant to a better understanding of the ecology of fungi.
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