用于糖尿病高尿酸血症分类的元数据信息和眼底图像融合神经网络

IF 4.9 2区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Computer methods and programs in biomedicine Pub Date : 2024-08-23 DOI:10.1016/j.cmpb.2024.108382
Jin Wei , Yupeng Xu , Hanying Wang , Tian Niu , Yan Jiang , Yinchen Shen , Li Su , Tianyu Dou , Yige Peng , Lei Bi , Xun Xu , Yufan Wang , Kun Liu
{"title":"用于糖尿病高尿酸血症分类的元数据信息和眼底图像融合神经网络","authors":"Jin Wei ,&nbsp;Yupeng Xu ,&nbsp;Hanying Wang ,&nbsp;Tian Niu ,&nbsp;Yan Jiang ,&nbsp;Yinchen Shen ,&nbsp;Li Su ,&nbsp;Tianyu Dou ,&nbsp;Yige Peng ,&nbsp;Lei Bi ,&nbsp;Xun Xu ,&nbsp;Yufan Wang ,&nbsp;Kun Liu","doi":"10.1016/j.cmpb.2024.108382","DOIUrl":null,"url":null,"abstract":"<div><h3>Objective</h3><p>In diabetes mellitus patients, hyperuricemia may lead to the development of diabetic complications, including macrovascular and microvascular dysfunction. However, the level of blood uric acid in diabetic patients is obtained by sampling peripheral blood from the patient, which is an invasive procedure and not conducive to routine monitoring. Therefore, we developed deep learning algorithm to detect noninvasively hyperuricemia from retina photographs and metadata of patients with diabetes and evaluated performance in multiethnic populations and different subgroups.</p></div><div><h3>Materials and methods</h3><p>To achieve the task of non-invasive detection of hyperuricemia in diabetic patients, given that blood uric acid metabolism is directly related to estimated glomerular filtration rate(eGFR), we first performed a regression task for eGFR value before the classification task for hyperuricemia and reintroduced the eGFR regression values into the baseline information. We trained 3 deep learning models: (1) metadata model adjusted for sex, age, body mass index, duration of diabetes, HbA1c, systolic blood pressure, diastolic blood pressure; (2) image model based on fundus photographs; (3)hybrid model combining image and metadata model. Data from the Shanghai General Hospital Diabetes Management Center (ShDMC) were used to develop (6091 participants with diabetes) and internally validated (using 5-fold cross-validation) the models. External testing was performed on an independent dataset (UK Biobank dataset) consisting of 9327 participants with diabetes.</p></div><div><h3>Results</h3><p>For the regression task of eGFR, in ShDMC dataset, the coefficient of determination (R2) was 0.684±0.07 (95 % CI) for image model, 0.501±0.04 for metadata model, and 0.727±0.002 for hybrid model. In external UK Biobank dataset, a coefficient of determination (R2) was 0.647±0.06 for image model, 0.627±0.03 for metadata model, and 0.697±0.07 for hybrid model. Our method was demonstrably superior to previous methods. For the classification of hyperuricemia, in ShDMC validation, the area, under the curve (AUC) was 0.86±0.013for image model, 0.86±0.013 for metadata model, and 0.92±0.026 for hybrid model. Estimates with UK biobank were 0.82±0.017 for image model, 0.79±0.024 for metadata model, and 0.89±0.032 for hybrid model.</p></div><div><h3>Conclusion</h3><p>There is a potential deep learning algorithm using fundus photographs as a noninvasively screening adjunct for hyperuricemia among individuals with diabetes. Meanwhile, combining patient's metadata enables higher screening accuracy. After applying the visualization tool, it found that the deep learning network for the identification of hyperuricemia mainly focuses on the fundus optic disc region.</p></div>","PeriodicalId":10624,"journal":{"name":"Computer methods and programs in biomedicine","volume":"256 ","pages":"Article 108382"},"PeriodicalIF":4.9000,"publicationDate":"2024-08-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0169260724003754/pdfft?md5=c3308820b3ca8bda1dc412912b891e0d&pid=1-s2.0-S0169260724003754-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Metadata information and fundus image fusion neural network for hyperuricemia classification in diabetes\",\"authors\":\"Jin Wei ,&nbsp;Yupeng Xu ,&nbsp;Hanying Wang ,&nbsp;Tian Niu ,&nbsp;Yan Jiang ,&nbsp;Yinchen Shen ,&nbsp;Li Su ,&nbsp;Tianyu Dou ,&nbsp;Yige Peng ,&nbsp;Lei Bi ,&nbsp;Xun Xu ,&nbsp;Yufan Wang ,&nbsp;Kun Liu\",\"doi\":\"10.1016/j.cmpb.2024.108382\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Objective</h3><p>In diabetes mellitus patients, hyperuricemia may lead to the development of diabetic complications, including macrovascular and microvascular dysfunction. However, the level of blood uric acid in diabetic patients is obtained by sampling peripheral blood from the patient, which is an invasive procedure and not conducive to routine monitoring. Therefore, we developed deep learning algorithm to detect noninvasively hyperuricemia from retina photographs and metadata of patients with diabetes and evaluated performance in multiethnic populations and different subgroups.</p></div><div><h3>Materials and methods</h3><p>To achieve the task of non-invasive detection of hyperuricemia in diabetic patients, given that blood uric acid metabolism is directly related to estimated glomerular filtration rate(eGFR), we first performed a regression task for eGFR value before the classification task for hyperuricemia and reintroduced the eGFR regression values into the baseline information. We trained 3 deep learning models: (1) metadata model adjusted for sex, age, body mass index, duration of diabetes, HbA1c, systolic blood pressure, diastolic blood pressure; (2) image model based on fundus photographs; (3)hybrid model combining image and metadata model. Data from the Shanghai General Hospital Diabetes Management Center (ShDMC) were used to develop (6091 participants with diabetes) and internally validated (using 5-fold cross-validation) the models. External testing was performed on an independent dataset (UK Biobank dataset) consisting of 9327 participants with diabetes.</p></div><div><h3>Results</h3><p>For the regression task of eGFR, in ShDMC dataset, the coefficient of determination (R2) was 0.684±0.07 (95 % CI) for image model, 0.501±0.04 for metadata model, and 0.727±0.002 for hybrid model. In external UK Biobank dataset, a coefficient of determination (R2) was 0.647±0.06 for image model, 0.627±0.03 for metadata model, and 0.697±0.07 for hybrid model. Our method was demonstrably superior to previous methods. For the classification of hyperuricemia, in ShDMC validation, the area, under the curve (AUC) was 0.86±0.013for image model, 0.86±0.013 for metadata model, and 0.92±0.026 for hybrid model. Estimates with UK biobank were 0.82±0.017 for image model, 0.79±0.024 for metadata model, and 0.89±0.032 for hybrid model.</p></div><div><h3>Conclusion</h3><p>There is a potential deep learning algorithm using fundus photographs as a noninvasively screening adjunct for hyperuricemia among individuals with diabetes. Meanwhile, combining patient's metadata enables higher screening accuracy. After applying the visualization tool, it found that the deep learning network for the identification of hyperuricemia mainly focuses on the fundus optic disc region.</p></div>\",\"PeriodicalId\":10624,\"journal\":{\"name\":\"Computer methods and programs in biomedicine\",\"volume\":\"256 \",\"pages\":\"Article 108382\"},\"PeriodicalIF\":4.9000,\"publicationDate\":\"2024-08-23\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S0169260724003754/pdfft?md5=c3308820b3ca8bda1dc412912b891e0d&pid=1-s2.0-S0169260724003754-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computer methods and programs in biomedicine\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0169260724003754\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer methods and programs in biomedicine","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0169260724003754","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
引用次数: 0

摘要

目的 糖尿病患者的高尿酸血症可能导致糖尿病并发症的发生,包括大血管和微血管功能障碍。然而,糖尿病患者的血尿酸水平是通过抽取患者的外周血获得的,这是一种侵入性程序,不利于常规监测。因此,我们开发了深度学习算法,从糖尿病患者的视网膜照片和元数据中无创地检测高尿酸血症,并评估了在多种族人群和不同亚群中的性能。材料与方法为了实现无创检测糖尿病患者高尿酸血症的任务,考虑到血尿酸代谢与估计肾小球滤过率(eGFR)直接相关,我们首先在高尿酸血症分类任务之前执行了eGFR值回归任务,并将eGFR回归值重新引入基线信息中。我们训练了三个深度学习模型:(1)根据性别、年龄、体重指数、糖尿病病程、HbA1c、收缩压、舒张压调整的元数据模型;(2)基于眼底照片的图像模型;(3)结合图像和元数据模型的混合模型。模型的开发(6091 名糖尿病患者)和内部验证(使用 5 倍交叉验证)使用了上海总医院糖尿病管理中心(ShDMC)的数据。结果对于eGFR的回归任务,在上海糖尿病管理中心数据集中,图像模型的决定系数(R2)为0.684±0.07(95 % CI),元数据模型为0.501±0.04,混合模型为0.727±0.002。在英国生物库外部数据集中,图像模型的判定系数(R2)为 0.647±0.06,元数据模型为 0.627±0.03,混合模型为 0.697±0.07。我们的方法明显优于之前的方法。对于高尿酸血症的分类,在 ShDMC 验证中,图像模型的曲线下面积(AUC)为 0.86±0.013,元数据模型为 0.86±0.013,混合模型为 0.92±0.026。结论使用眼底照片作为糖尿病患者高尿酸血症的无创辅助筛查方法是一种潜在的深度学习算法。同时,结合患者的元数据可以提高筛查的准确性。应用可视化工具后发现,用于识别高尿酸血症的深度学习网络主要集中在眼底视盘区域。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Metadata information and fundus image fusion neural network for hyperuricemia classification in diabetes

Objective

In diabetes mellitus patients, hyperuricemia may lead to the development of diabetic complications, including macrovascular and microvascular dysfunction. However, the level of blood uric acid in diabetic patients is obtained by sampling peripheral blood from the patient, which is an invasive procedure and not conducive to routine monitoring. Therefore, we developed deep learning algorithm to detect noninvasively hyperuricemia from retina photographs and metadata of patients with diabetes and evaluated performance in multiethnic populations and different subgroups.

Materials and methods

To achieve the task of non-invasive detection of hyperuricemia in diabetic patients, given that blood uric acid metabolism is directly related to estimated glomerular filtration rate(eGFR), we first performed a regression task for eGFR value before the classification task for hyperuricemia and reintroduced the eGFR regression values into the baseline information. We trained 3 deep learning models: (1) metadata model adjusted for sex, age, body mass index, duration of diabetes, HbA1c, systolic blood pressure, diastolic blood pressure; (2) image model based on fundus photographs; (3)hybrid model combining image and metadata model. Data from the Shanghai General Hospital Diabetes Management Center (ShDMC) were used to develop (6091 participants with diabetes) and internally validated (using 5-fold cross-validation) the models. External testing was performed on an independent dataset (UK Biobank dataset) consisting of 9327 participants with diabetes.

Results

For the regression task of eGFR, in ShDMC dataset, the coefficient of determination (R2) was 0.684±0.07 (95 % CI) for image model, 0.501±0.04 for metadata model, and 0.727±0.002 for hybrid model. In external UK Biobank dataset, a coefficient of determination (R2) was 0.647±0.06 for image model, 0.627±0.03 for metadata model, and 0.697±0.07 for hybrid model. Our method was demonstrably superior to previous methods. For the classification of hyperuricemia, in ShDMC validation, the area, under the curve (AUC) was 0.86±0.013for image model, 0.86±0.013 for metadata model, and 0.92±0.026 for hybrid model. Estimates with UK biobank were 0.82±0.017 for image model, 0.79±0.024 for metadata model, and 0.89±0.032 for hybrid model.

Conclusion

There is a potential deep learning algorithm using fundus photographs as a noninvasively screening adjunct for hyperuricemia among individuals with diabetes. Meanwhile, combining patient's metadata enables higher screening accuracy. After applying the visualization tool, it found that the deep learning network for the identification of hyperuricemia mainly focuses on the fundus optic disc region.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Computer methods and programs in biomedicine
Computer methods and programs in biomedicine 工程技术-工程:生物医学
CiteScore
12.30
自引率
6.60%
发文量
601
审稿时长
135 days
期刊介绍: To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine. Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.
期刊最新文献
A porohyperelastic scheme targeted at High-Performance Computing frameworks for the simulation of the intervertebral disc. Dynamic evolution analysis and parameter optimization design of data-driven network infectious disease model. Recent advancements and future directions in automatic swallowing analysis via videofluoroscopy: A review. SlicerCineTrack: An open-source research toolkit for target tracking verification in 3D Slicer. Label correlated contrastive learning for medical report generation.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1