对侧和同侧脑半球放射学特征预测胶质瘤遗传标记

Nicholas C. Wang , Johann Gagnon-Bartsch , Ashok Srinivasan , Michelle M. Kim , Douglas C. Noll , Arvind Rao
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引用次数: 0

摘要

目的:神经胶质瘤的放射组学特征常用于预测放射学研究中的遗传标记。从对侧大脑中提取放射学特征,以测试肿瘤纹理是否驱动机器学习模型的预测能力。理想情况下,这些对侧模型将是肿瘤放射组学模型的阴性对照,因为许多研究使用对侧正常出现的白质进行归一化。本研究利用这些特征来预测IDH突变状态、MGMT启动子甲基化、TERT启动子突变和ATRX随机森林突变状态。方法:提取肿瘤区域、对侧镜像区域、肿瘤内球形区域、对侧球形区域和同侧球形样本的放射学特征。这些特征被独立地用于使用随机森林预测IDH、MGMT、TERT和ATRX。主要发现:仅对侧特征与肿瘤特征一样可预测IDH突变状态,并且对几种遗传标记具有预测能力。结论:对侧脑组织应仔细进行正常化,并进一步调查对侧潜在的放射学改变是有必要的。
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Radiomic features of contralateral and ipsilateral hemispheres for prediction of glioma genetic markers

Purpose: Radiomic features of gliomas are often used to predict genetic markers from radiological studies. Radiomic features were extracted from the contralateral brain to test if tumor texture is driving the predictive power of machine learning models. Ideally, these contralateral models would be a negative control for tumor radiomics models, since many studies use contralateral normal appearing white matter for normalization. This study used those features to attempt to predict IDH mutation status, MGMT promoter methylation, TERT promoter mutation, and ATRX mutation status with random forests.

Methods: Radiomic features were extracted from the tumor region, a mirrored contralateral region, a spherical region within the tumor, a spherical region on the contralateral, and a spherical sample of the ipsilateral side. These features were used independently to predict IDH, MGMT, TERT, and ATRX using random forests.

Main Findings: Contralateral features alone were as predictive of IDH mutation status as tumor features and had predictive power for several genetic markers.

Conclusion: Normalization with contralateral brain should be done carefully, and further investigation of potential radiological changes to the contralateral is warranted.

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来源期刊
Neuroscience informatics
Neuroscience informatics Surgery, Radiology and Imaging, Information Systems, Neurology, Artificial Intelligence, Computer Science Applications, Signal Processing, Critical Care and Intensive Care Medicine, Health Informatics, Clinical Neurology, Pathology and Medical Technology
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57 days
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