基于深度学习的细胞增殖检测

Hao Wang, X. Lv, Guohua Wu, Guodong Lv, Xiangxiang Zheng
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引用次数: 0

摘要

细胞增殖水平对临床诊断具有重要意义。细胞增殖水平的分析有助于判断患者病情的发展趋势,有助于诊断。为了评价细胞的增殖水平,有必要计算增殖细胞核的数量和比例。但是,当细胞核数量较大时,会给医生带来很大的压力,准确率也会下降。针对这些问题,本文提出了一种数量多、分布密的细胞核自动检测与计数方案。我们的数据集来自小鼠肝细胞,共136个样本,每个样本含有100-300个细胞核,并通过免疫组织化学染色对细胞核的增殖进行染色,其中120个样本使用卷积神经网络进行训练,16个样本进行测试以评估模型的效果。用retanet分别以Vgg6、ResNet50和ResNet101骨干网训练3个模型,并与Image Pro Plus 6.0进行比较。实验表明,与使用Image-Pro Plus 6.0手动检测和计数的67.2%相比,我们的模型具有更高的准确率。可以看出,在检测精度方面,我们的模型优于医院广泛使用的分析软件,有效地解决了人工检测时间长、准确率低的问题。它可以有效地帮助医生评估细胞增殖水平,然后快速做出相应的诊断。
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Cell proliferation detection based on deep learning
Cell proliferation level is important in clinical diagnosis. Analysis of cell proliferation level can help to judge the development trend of patient's condition, which is helpful for diagnosis. In order to evaluate the level of cell proliferation, it is necessary to calculate the number and proportion of proliferating nuclei. However, when the number of nuclei is large, it will bring a great pressure on doctors, and the accuracy rate will also decline. To solve these problems, this paper proposes a scheme for automatic detection and counting of cell nuclei, which is large in number and densely distributed. Our dataset is obtained from mouse liver cells, a total of 136 samples, each containing 100-300 nuclei and the proliferation of nuclei are stained by immunohistochemical staining, of which 120 are trained using convolution neural network and 16 samples are tested to evaluate the effects of the models. Three models were trained by RetinaNet with backbone networks of Vgg6, ResNet50 and ResNet101 respectively, and compared with Image Pro Plus 6.0. Experiments show that our models achieve higher accuracy compared with 67.2% obtained by manual using Image-Pro Plus 6.0 for detection and counting. It can be seen that in terms of detection accuracy, our models are better than the analysis software widely used in hospitals, effectively solving the problems of long manual detection time and low accuracy. It can effectively help doctors to evaluate the level of cell proliferation, and then quickly make a corresponding diagnosis.
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