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Evaluation of the applicability of a metal oxide semiconductor gas sensor for methane emissions from agriculture 金属氧化物半导体气体传感器对农业甲烷排放的适用性评估
IF 7.7 Q1 AGRICULTURE, MULTIDISCIPLINARY Pub Date : 2024-12-01 DOI: 10.1016/j.inpa.2023.11.001
Bastiaan Molleman , Enrico Alessi , Fabio Passaniti , Karen Daly
This work investigated the potential of metal oxide semiconductor (MOS) gas sensors for environmental monitoring of methane. Calibrations were performed under controlled conditions in the lab, and under semi-controlled conditions in the field, using a modified head space chamber set-up. Concentrations up to ±300 ppm methane were tested. The relationship between sensor conductance and methane concentrations could be very well described using principles from adsorption theory. The adjustable parameters were background conductance G0, a sensitivity constant S and a non-ideality coefficient n, where n has a non-rational value between 0 and 1. Sensor behaviour was very different in dry air than in humid air, with the background conductance increasing approximately tenfold and sensitivity decreasing between 20 fold and 80 fold, while the non-ideality coefficient increased from ±0.4 to ±0.6. Nevertheless, at high methane concentrations comparable conductance values were recorded in dry and humid air. The standard deviation of predicted values was 1.6 μS.for the least well described dataset. Using the corresponding calibration curve, a detection limit of 11 ppm is calculated for humid ambient air. This values suggests that MOS sensor are adequately sensitive to be used for methane detection in an agricultural context.
本文研究了金属氧化物半导体(MOS)气体传感器用于甲烷环境监测的潜力。校准在实验室的受控条件下进行,在现场的半受控条件下进行,使用改进的头部空间室设置。测试的甲烷浓度高达±300 ppm。传感器电导与甲烷浓度之间的关系可以用吸附理论的原理很好地描述。可调参数为背景电导G0、灵敏度常数S和非理想系数n,其中n为0 ~ 1之间的无理数。在干燥空气中,传感器的行为与潮湿空气中有很大的不同,背景电导增加了大约10倍,灵敏度下降了20到80倍,而非理想系数从±0.4增加到±0.6。然而,在高甲烷浓度下,在干燥和潮湿空气中记录的电导值相当。预测值的标准差为1.6 μS。对于描述最少的数据集。使用相应的校准曲线,计算出潮湿环境空气的检测限为11ppm。这一数值表明,MOS传感器具有足够的灵敏度,可用于农业环境中的甲烷检测。
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引用次数: 0
Population genetics and origin of horticultural germplasm in Clematis via genotyping-by-sequencing.
IF 7.6 Q1 GENETICS & HEREDITY Pub Date : 2024-11-29 eCollection Date: 2025-03-01 DOI: 10.1093/hr/uhae336
Yaping Hu, Qingdi Hu, Xiaohua Ma, Xule Zhang, Jian Zheng
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引用次数: 0
Stable plastid transformation in kiwifruit (Actinidia chinensis)
IF 4.6 4区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-11-28 DOI: 10.1007/s42994-024-00186-0
Qiqi Chen, Yuyong Wu, Yanchang Wang, Jiang Zhang, Shengchun Li

Plastid transformation offers valuable benefits in plant biotechnology, such as high-level transgene expression and the absence of gene silencing. Here we describe the first protocol of a plastid transformation system for a woody vine (liana) kiwifruit (Actinidia chinensis). The transgenic DNA carries a spectinomycin-resistance gene (aadA) cassette and a green fluorescent protein (GFP) reporter gene cassette, flanked by two adjacent kiwifruit plastid genome sequences, thereby allowing targeted insertion between the trnfM and trnG genes. Six spectinomycin-resistant shoots were obtained out of 12 plates subjected to bombardment, and two were positive events, confirmed through PCR and Southern blot analyses. The GFP was localized to plastids as monitored by confocal laser scanning microscopy and reached 2.5% of leaf total soluble protein. Success in kiwifruit extends transplastomic technology of woody species beyond poplar, and will provide an attractive biosynthetic chassis for molecular farming.

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引用次数: 0
A multiplex microfluidic device to detect miRNAs for diagnosis of plant growth status.
IF 7.6 Q1 GENETICS & HEREDITY Pub Date : 2024-11-26 eCollection Date: 2025-03-01 DOI: 10.1093/hr/uhae323
Yaichi Kawakatsu, Mitsuo Hara, Ken-Ichi Kurotani, Akihide Arima, Yoshinobu Baba, Michitaka Notaguchi
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引用次数: 0
Development of an RNA virus vector for non-transgenic genome editing in tobacco and generation of berberine bridge enzyme-like mutants with reduced nicotine content 烟草非转基因基因组编辑RNA病毒载体的研制和尼古丁含量降低的小檗碱桥酶样突变体的产生
IF 4.6 4区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-11-22 DOI: 10.1007/s42994-024-00188-y
Haiying Xiang, Binhuan Chen, Shuo Wang, Wanli Zeng, Jiarui Jiang, Weisong Kong, Haitao Huang, Qili Mi, Shuang Ni, Qian Gao, Zhenghe Li

Tobacco (Nicotiana tabacum) plants synthesize the psychoactive pyridine alkaloid nicotine, which has sparked growing interest in reducing nicotine levels through genome editing aiming at inactivating key biosynthetic genes. Although stable transformation-mediated genome editing is effective in tobacco, its polyploid nature complicates the complete knockout of genes and the segregation of transgenes from edited plants. In this study, we developed a non-transgenic genome editing method in tobacco by delivering the CRISPR/Cas machinery via an engineered negative-strand RNA rhabdovirus vector, followed by the regeneration of mutant plants through tissue culture. Using this method, we targeted six berberine bridge enzyme-like protein (BBL) family genes for mutagenesis, which are implicated in the last steps of pyridine alkaloid biosynthesis, in the commercial tobacco cultivar Hongda. We generated a panel of 16 mutant lines that were homozygous for mutations in various combinations of BBL genes. Alkaloid profiling revealed that lines homozygous for BBLa and BBLb mutations exhibited drastically reduced nicotine levels, while other BBL members played a minor role in nicotine synthesis. The decline of nicotine content in these lines was accompanied by reductions in anatabine and cotinine levels but increases in nornicotine and its derivative myosmine. Preliminary agronomic evaluation identified two low-nicotine lines with growth phenotypes comparable to those of wild-type plants under greenhouse and field conditions. Our work provides potentially valuable genetic materials for breeding low-nicotine tobacco and enhances our understanding of alkaloid biosynthesis.

烟草(Nicotiana tabacum)植物合成具有精神活性的吡啶生物碱尼古丁,这引发了人们对通过基因组编辑来降低尼古丁水平的兴趣,这种编辑旨在使关键的生物合成基因失活。虽然稳定的转化介导的基因组编辑在烟草中是有效的,但其多倍体性质使基因的完全敲除和从编辑植物中分离转基因变得复杂。在本研究中,我们开发了一种非转基因烟草基因组编辑方法,通过工程负链RNA横纹肌病毒载体传递CRISPR/Cas机制,然后通过组织培养再生突变植株。利用该方法,以商品烟草红达为研究对象,对6个参与吡啶生物碱合成最后步骤的小檗碱桥酶样蛋白(BBL)家族基因进行诱变。我们生成了一个由16个突变系组成的小组,这些突变系在BBL基因的各种组合中都是纯合的。生物碱谱分析显示,BBLa和BBLb突变纯合子株系尼古丁水平显著降低,而其他BBL成员在尼古丁合成中起次要作用。在这些品系中,尼古丁含量的下降伴随着阿那他滨和可替宁水平的降低,但去尼古丁及其衍生物肌胺的增加。初步农艺鉴定鉴定出两个低烟碱系,在温室和田间条件下的生长表型与野生型植物相当。我们的工作为培育低尼古丁烟草提供了潜在的有价值的遗传材料,并增强了我们对生物碱生物合成的理解。
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引用次数: 0
Tonoplast sugar transporters as key drivers of sugar accumulation, a case study in sugarcane.
IF 7.6 Q1 GENETICS & HEREDITY Pub Date : 2024-11-06 eCollection Date: 2025-02-01 DOI: 10.1093/hr/uhae312
Michael Tang, Jiang Wang, Baskaran Kannan, Niki Maria Koukoulidis, Yi-Hsuan Lin, Fredy Altpeter, Li-Qing Chen
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引用次数: 0
Dietary administration of probiotic Bacillus coagulans and Mentha piperita can protect histological architecture and DNA damage in Catla catla (Hamilton, 1822) 膳食中添加益生菌凝结芽孢杆菌和薄荷可保护猫鼬(Hamilton,1822)的组织结构和DNA损伤
Q1 Agricultural and Biological Sciences Pub Date : 2024-11-01 DOI: 10.1016/j.aaf.2023.02.002
The present experimental investigation was executed to evaluate the combined effect of probiotic bacterium Bacillus coagulans along with herb Mentha piperita on histological architecture; and extent of DNA damage after challenge trial with pathogenic bacterium Aeromonas hydrophila in Catla catla. In this experiment, six dietary treatments in triplicate were formulated; C0, M3 and M6 in which M. piperita was supplemented at 0, 3, 6 g kg−1 of feed, while in dietary treatments CP, MP3 and MP6; supplementation of probiotic bacterium B. coagulans at the rate of 3000 CFU g−1 was done along with different inclusion level of M. piperita (0, 3, 6 g kg−1 of feed). Fishes were fed for 60 days on different dietary treatments. Growth performance, histological study and extent of DNA damage using comet assay was examined. Significantly (p < 0.05) high growth % gain in BW was observed in treatment MP6 followed by treatment M6. The histological analysis clearly revealed that dietary M. piperita without or with probiotic bacterium can protect the histoarchitecture of intestinal layers and liver even after challenge with A. hydrophila. Analysis of various comet parameters (tail length, olive moment, tail DNA, head DNA) affirmed that M. piperita supplemented diet can reduce the extent of DNA damage in fishes after challenge trial with A. hydrophila, however dietary supplementation of probiotic bacterium along with M. piperita can reduce the DNA damage up to larger extent confirming its combined protective effect of supplemented diets.
本实验研究旨在评估益生菌凝结芽孢杆菌和薄荷对猫鼬病原菌嗜水气单胞菌挑战试验后的组织学结构和 DNA 损伤程度的综合影响。在该实验中,共制定了六种一式三份的膳食处理:C0、M3 和 M6,其中蒌草的添加量分别为 0、3 和 6 g kg-1 饲料,而在 CP、MP3 和 MP6 膳食处理中,在添加不同水平的蒌草(0、3 和 6 g kg-1 饲料)的同时,还添加了 3000 CFU g-1 的益生菌凝结球菌。鱼类在不同的饮食处理下被喂养了 60 天。采用彗星试验对鱼类的生长性能、组织学研究和 DNA 损伤程度进行了检测。观察到 MP6 处理的体重增长百分比显著高于 M6 处理(p < 0.05)。组织学分析清楚地表明,即使在受到嗜水青虫的挑战后,不添加益生菌或添加益生菌的膳食中的蒌蒿能保护肠道层和肝脏的组织结构。对各种彗星参数(尾长、橄榄时刻、尾部 DNA、头部 DNA)的分析表明,补充瓜子黄酮的膳食可以减少鱼类在受到蚜蝇绥氏菌挑战后的 DNA 损伤程度,但在补充瓜子黄酮的同时补充益生菌可以在更大程度上减少 DNA 损伤,这证实了补充膳食的综合保护作用。
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引用次数: 0
CRISPR/Cas9-mediated mutation of Mstn confers growth performance in Culter alburnus juveniles CRISPR/Cas9 介导的 Mstn 基因突变可提高白腹角雉幼体的生长性能
Q1 Agricultural and Biological Sciences Pub Date : 2024-11-01 DOI: 10.1016/j.aaf.2023.04.008
Myostatin is a member of the TGF-β superfamily and functions as a negative regulator for skeletal muscle development and growth. It has become the most targeted gene in aquaculture that used for selective breeding. Previous studies involved in genome editing in several fish species confirmed that CRISPR/Cas9 (Clustered Regularly Interspaced Short Palindromic Repeats) system was highly efficient with lower off-target effect, however, no reports were raised in Culter alburnus. In this study, we employed CRISPR/Cas9 gene editing system to successfully disrupt mstn gene by co-injection with Cas9 protein and the targeted sgRNA in C. alburnus. Various Indel mutations were obtained with 82% knockout efficiency in the F0 generation by PCR sequencing. In addition, mutations in mstn that induced by CRISPR/Cas9 were detected in the F1 generation by individually mating the wild-type female with the F0 generation of mstn-KO male at sexual maturity. More importantly, the body weight and length were significantly elevated in mstn ± group when compared to those of the control. As expected in mstn ± group, the expression level of mstn was sharply reduced, whereas a slight increase was observed in two growth-related genes (myod and myog). Moreover, higher numbers of muscle fibers were observed in mstn ± group, meaning that growth performance in mstn ± individuals might be represented by increasing the number of muscle fibers. Taken together, our current study successfully obtained a site-specific modification of mstn using CRISPR/Cas9 technology, and these results provided a new insight for facilitating topmouth culter genetic studies and breeding.
Myostatin 是 TGF-β 超家族的成员,是骨骼肌发育和生长的负调控因子。它已成为水产养殖中用于选择性育种的最多目标基因。以往在多个鱼类物种中进行的基因组编辑研究证实,CRISPR/Cas9(Clustered Regularly Interspaced Short Palindromic Repeats)系统具有高效率、低脱靶效应的特点,但在白鲑鱼中尚未见报道。在本研究中,我们采用CRISPR/Cas9基因编辑系统,通过共注射Cas9蛋白和靶向sgRNA,成功地破坏了白僵菌的mstn基因。通过PCR测序,在F0代中获得了多种Indel突变,基因敲除效率高达82%。此外,通过将野生型雌性与F0代mstn-KO雄性在性成熟时单独交配,在F1代中检测到了CRISPR/Cas9诱导的mstn突变。更重要的是,与对照组相比,mstn±组的体重和体长明显增加。正如预期的那样,在mstn±组中,mstn的表达水平急剧下降,而两个与生长相关的基因(myod和myog)的表达水平则略有上升。此外,在 mstn ± 组中观察到了更多的肌纤维,这意味着 mstn ± 组个体的生长表现可能是通过增加肌纤维数量来体现的。综上所述,本研究利用CRISPR/Cas9技术成功地对mstn进行了位点特异性修饰,这些结果为促进顶口秆鱼的遗传研究和育种提供了新的见解。
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引用次数: 0
Simvastatin enhanced growth and altered testis transcriptome profiles of male tilapias 辛伐他汀促进雄性罗非鱼的生长并改变其睾丸转录组图谱
Q1 Agricultural and Biological Sciences Pub Date : 2024-11-01 DOI: 10.1016/j.aaf.2023.05.010
Simvastatin (SIM), a commonly prescribed drug for lowering serum-lipid, has been detected in many aquatic environments. Exposure to high concentrations of SIM in rats and aquatic organisms resulted in toxicity to hepatocytes and negative effects on development. However, there is a paucity of studies on the effects of long-term exposure to low concentrations of SIM on aquaculture species. This study aimed to analyze the effects of environmentally relevant concentrations (0.1 μg/L and 1 μg/L) of SIM exposure for two months on developing Mozambique tilapias. Surprisingly, the growth of male tilapias was enhanced after a 2-month SIM exposure. The analysis of testis histology revealed that after the SIM exposure, the development of the testis was delayed, and sperm production was reduced. Sequencing of testis transcriptomes showed that the exposure to SIM altered the expression of many genes related to the development of testes and spermatogenesis. These data suggest that a 2-month exposure to environmentally relevant concentrations of increases the growth of male tilapias by inhibiting sexual development of males.
辛伐他汀(SIM)是一种用于降低血清脂质的常用处方药,在许多水生环境中都被检测到。大鼠和水生生物接触高浓度 SIM 会导致肝细胞中毒,并对发育产生负面影响。然而,有关长期接触低浓度 SIM 对水产养殖物种影响的研究却很少。本研究旨在分析环境相关浓度(0.1 μg/L 和 1 μg/L)的 SIM 接触两个月对莫桑比克罗非鱼发育的影响。令人惊讶的是,雄性罗非鱼在接触 SIM 2 个月后生长速度加快。睾丸组织学分析表明,接触 SIM 后,睾丸发育延迟,精子生成减少。睾丸转录组测序表明,接触 SIM 改变了许多与睾丸发育和精子生成有关的基因的表达。这些数据表明,暴露于环境相关浓度的 SIM 2 个月会抑制雄性罗非鱼的性发育,从而影响雄性罗非鱼的生长。
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引用次数: 0
Ameliorative effect of walnut oil against cognitive impairment in alzheimers type dementia in rodent 核桃油对啮齿动物阿尔茨海默型痴呆认知功能障碍的改善作用
Q3 Agricultural and Biological Sciences Pub Date : 2024-11-01 DOI: 10.1016/j.ocsci.2024.09.003
Congcong Ma , Li Zhang , Lei Wang , Qingde Huang , Qianchun Deng , Fenghong Huang , Jiqu Xu
Walnut oil (WO), known for abundant polyunsaturated fatty acids and an array of bioactive substances such as tocopherols, phytosterols, squalene, melatonin, and polyphenols, which is endowed with numerous health advantages. The primary objective of this research was to ascertain the impact of WO on cognitive deficits in learning and memory impairment mice caused by scopolamine (SCOP). The Morris water maze and the step-down avoidance test were utilized to assess the memory and learning capabilities. WO notably counteracted the detrimental effects of SCOP on learning and memory in the Morris water maze, as indicated by a reduction in escape latency and swimming distance. Likewise, WO administration led to a notably reduced number of errors in training trial and an increased latency in testing trial when compared to the SCOP group in the step-down avoidance test,. Moreover, WO activated the cholinergic system of the brain by upregulating choline acetyltransferase activity and reducing acetylcholinesterase activity. These results suggest that WO has the potential to protect against memory decline in mice, offering a promising strategy for the prevention of memory-related disorders.
核桃油(WO)以丰富的多不饱和脂肪酸和一系列生物活性物质(如生育酚、植物甾醇、角鲨烯、褪黑激素和多酚)而闻名,具有众多健康优势。本研究的主要目的是确定 WO 对东莨菪碱(SCOP)导致的学习和记忆障碍小鼠认知缺陷的影响。研究采用了莫里斯水迷宫和降阶回避测试来评估小鼠的记忆和学习能力。在莫里斯水迷宫中,WO明显抵消了SCOP对学习和记忆的不利影响,这表现在逃逸潜伏期和游泳距离的缩短上。同样,在降阶回避测试中,与 SCOP 组相比,施用 WO 可显著减少训练试验中的错误次数,增加测试试验中的潜伏期。此外,WO 还能通过上调胆碱乙酰转移酶活性和降低乙酰胆碱酯酶活性来激活大脑的胆碱能系统。这些结果表明,WO 具有防止小鼠记忆力衰退的潜力,为预防记忆相关疾病提供了一种很有前景的策略。
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引用次数: 0
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