Drought and salt stress are common abiotic constraints that limit plant growth, development, and reproduction. In response, plants have evolved complex molecular regulatory networks enabling them to perceive external stresses acutely and initiate rapid responses. Among these, microRNAs(miRNAs) play a pivotal role. Plant miRNAs are a class of non-coding small RNAs approximately 20-24 nucleotides in length, which exert their stress-responsive functions by cleaving target genes at the post-transcriptional level or inhibiting their translation. In recent years, with the rapid development and widespread application of high-throughput sequencing technology, a large number of miRNAs involved in drought and salt stress responses have been identified, and their functions and mechanisms of action have been gradually elucidated. In this review, we systematically summarize the molecular mechanisms by which miRNAs participate in regulating plant responses to drought and salt stress, comprehensively illustrating the commonality and specificityof miRNA-mediated drought resistance and salt tolerance in plants. We also compile and discuss the miRNAs that could serve as potential targets for biological breeding. The aim is to provide a reference for in-depth research on plant miRNAs, as well as a theoretical basis and forward-looking perspectives for their practical application in the genetic improvement of drought resistance and salt tolerance in plants.
{"title":"Progress on miRNAs involved in regulating plant responses to drought and salt stresses.","authors":"Hao-Dong Li, Jia-Xin Meng, Hua Wang, Ning-Guang Dong","doi":"10.16288/j.yczz.25-181","DOIUrl":"https://doi.org/10.16288/j.yczz.25-181","url":null,"abstract":"<p><p>Drought and salt stress are common abiotic constraints that limit plant growth, development, and reproduction. In response, plants have evolved complex molecular regulatory networks enabling them to perceive external stresses acutely and initiate rapid responses. Among these, microRNAs(miRNAs) play a pivotal role. Plant miRNAs are a class of non-coding small RNAs approximately 20-24 nucleotides in length, which exert their stress-responsive functions by cleaving target genes at the post-transcriptional level or inhibiting their translation. In recent years, with the rapid development and widespread application of high-throughput sequencing technology, a large number of miRNAs involved in drought and salt stress responses have been identified, and their functions and mechanisms of action have been gradually elucidated. In this review, we systematically summarize the molecular mechanisms by which miRNAs participate in regulating plant responses to drought and salt stress, comprehensively illustrating the commonality and specificityof miRNA-mediated drought resistance and salt tolerance in plants. We also compile and discuss the miRNAs that could serve as potential targets for biological breeding. The aim is to provide a reference for in-depth research on plant miRNAs, as well as a theoretical basis and forward-looking perspectives for their practical application in the genetic improvement of drought resistance and salt tolerance in plants.</p>","PeriodicalId":35536,"journal":{"name":"遗传","volume":"48 1","pages":"61-75"},"PeriodicalIF":0.0,"publicationDate":"2026-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145999182","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Resistant hypertension (RH) is one of the high-risk types within the spectrum of hypertensive disorders, characterized by a complex pathogenesis. To identify hub differentially expressed genes (DEGs) associated with this disease, this study performed transcriptome sequencing on 30 blood samples collected in 2022 from the Affiliated Hospital of Shandong University of Traditional Chinese Medicine and Jinan Fifth People's Hospital (comprising 10 hypertensive patients, 10 RH patients, and 10 healthy controls). Using DESeq2 analysis, 731 DEGs were initially screened. Subsequently, weighted gene co-expression network analysis (WGCNA) identified 2 modules significantly associated with RH (containing 1,944 genes). Taking the intersection of these module genes and the DEGs yielded 229 key DEGs. Gene Ontology (GO) enrichment analysis revealed that these key DEGs were significantly enriched in biological processes such as drug catabolic process, cellular components like hemoglobin complex, and molecular functions including peroxidase activity. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis indicated that these DEGs were associated with pathways such as the VEGF signaling pathway and mitophagy. A protein-protein interaction (PPI) network was further constructed. Using the cytohubba plugin in Cytoscape software, hub genes were identified by integrating the results from 12 algorithms (taking the intersection of the top 20 genes from each algorithm), preliminarily determining GATA1, EPB42, ANK1, and SNCA as the hub DEGs. Validation by qRT-PCR confirmed that the expression changes of GATA1 and EPB42 were consistent with the sequencing results. This study suggests that the development of RH involves the synergistic action of multiple genes, and perturbations in hub genes (GATA1, EPB42) and related pathways (VEGF signaling pathway, mitophagy) may play significant roles in the disease process. These findings provide new insights for a deeper understanding of the pathological mechanisms underlying RH.
{"title":"Characterizing transcriptomic signatures and identifying hub differentially expressed genes in resistant hypertension.","authors":"Tong Jiang, Shi-Jing Peng, Shan-Shan Wang, Yu-Qi Wang, Wen-Jie Zhao, Wen-Qing Yang","doi":"10.16288/j.yczz.25-104","DOIUrl":"https://doi.org/10.16288/j.yczz.25-104","url":null,"abstract":"<p><p>Resistant hypertension (RH) is one of the high-risk types within the spectrum of hypertensive disorders, characterized by a complex pathogenesis. To identify hub differentially expressed genes (DEGs) associated with this disease, this study performed transcriptome sequencing on 30 blood samples collected in 2022 from the Affiliated Hospital of Shandong University of Traditional Chinese Medicine and Jinan Fifth People's Hospital (comprising 10 hypertensive patients, 10 RH patients, and 10 healthy controls). Using DESeq2 analysis, 731 DEGs were initially screened. Subsequently, weighted gene co-expression network analysis (WGCNA) identified 2 modules significantly associated with RH (containing 1,944 genes). Taking the intersection of these module genes and the DEGs yielded 229 key DEGs. Gene Ontology (GO) enrichment analysis revealed that these key DEGs were significantly enriched in biological processes such as drug catabolic process, cellular components like hemoglobin complex, and molecular functions including peroxidase activity. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis indicated that these DEGs were associated with pathways such as the VEGF signaling pathway and mitophagy. A protein-protein interaction (PPI) network was further constructed. Using the cytohubba plugin in Cytoscape software, hub genes were identified by integrating the results from 12 algorithms (taking the intersection of the top 20 genes from each algorithm), preliminarily determining <i>GATA1, EPB42, ANK1</i>, and <i>SNCA</i> as the hub DEGs. Validation by qRT-PCR confirmed that the expression changes of <i>GATA</i>1 and <i>EPB42</i> were consistent with the sequencing results. This study suggests that the development of RH involves the synergistic action of multiple genes, and perturbations in hub genes (<i>GATA1</i>, <i>EPB42</i>) and related pathways (VEGF signaling pathway, mitophagy) may play significant roles in the disease process. These findings provide new insights for a deeper understanding of the pathological mechanisms underlying RH.</p>","PeriodicalId":35536,"journal":{"name":"遗传","volume":"48 1","pages":"76-86"},"PeriodicalIF":0.0,"publicationDate":"2026-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145999194","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Teng-Fei Zheng, Xin-Yue Liang, Ying-Ying Meng, Ya-Long An, Yu-He Wang, Xin'e Shi, Xiao Li
Glutathione peroxidase 8(GPX8) is a key member of the glutathione peroxidase family. Genome-wide association studies (GWAS) have indicated that GPX8 is highly associated with growth and carcass traits of pigs. Using porcine skeletal muscle satellite cells, this study explored the effects of GPX8 on myogenic differentiation and myofiber type switching through GPX8 knockdown and overexpression, combined with analyses involving immunofluorescence staining, qRT-PCR, and Western blotting. The results demonstrated that GPX8 knockdown significantly increased the myogenic differentiation index (P<0.01) and promoted both mRNA and protein levels of the myogenic marker genes MyHC and MyoG (P<0.05). Conversely, GPX8 overexpression exhibited the opposite effects. GPX8 knockdown significantly reduced the mRNA level of MYH7 (P<0.01) and protein level of slow-twitch MyHC (slow-MyHC)(P<0.05), while suppressing mitochondrial biogenesis. In contrast, GPX8 overexpression exhibited opposing results. Integrated multi-omics data from GWAS analyses were employed to identify expression quantitative trait locus (eQTLs) regulating GPX8 expression. The effects of candidate SNPs on GPX8 promoter activity were further validated using dual-luciferase reporter assays. Five candidate SNPs (rs335618489, rs325233940, rs32989756, rs322106839, and rs701033890) were identified within the GPX8 promoter region. Among these, rs335618489-T, rs325233940-G, rs32989756-T, and rs322106839-G significantly upregulated GPX8 expression level by altering promoter activity (P<0.01), thereby influencing porcine muscle development traits. In summary, this study demonstrates that GPX8 inhibits the myogenic differentiation of porcine skeletal muscle satellite cells and promotes the transition from fast-twitch to slow-twitch myofibers. Functional SNPs in the GPX8 promoter region influence porcine muscle development by modulating GPX8 expression, thereby providing valuable breeding targets for improving pork production.
{"title":"<i>GPX8</i> inhibits myogenic differentiation and promotes slow myofiber formation of porcine skeletal muscle satellite cells.","authors":"Teng-Fei Zheng, Xin-Yue Liang, Ying-Ying Meng, Ya-Long An, Yu-He Wang, Xin'e Shi, Xiao Li","doi":"10.16288/j.yczz.25-173","DOIUrl":"https://doi.org/10.16288/j.yczz.25-173","url":null,"abstract":"<p><p>Glutathione peroxidase 8(GPX8) is a key member of the glutathione peroxidase family. Genome-wide association studies (GWAS) have indicated that <i>GPX8</i> is highly associated with growth and carcass traits of pigs. Using porcine skeletal muscle satellite cells, this study explored the effects of <i>GPX8</i> on myogenic differentiation and myofiber type switching through <i>GPX8</i> knockdown and overexpression, combined with analyses involving immunofluorescence staining, qRT-PCR, and Western blotting. The results demonstrated that <i>GPX8</i> knockdown significantly increased the myogenic differentiation index (<i>P</i><0.01) and promoted both mRNA and protein levels of the myogenic marker genes <i>MyHC</i> and <i>MyoG</i> (<i>P</i><0.05). Conversely, <i>GPX8</i> overexpression exhibited the opposite effects. <i>GPX8</i> knockdown significantly reduced the mRNA level of <i>MYH7</i> (<i>P</i><0.01) and protein level of slow-twitch MyHC (slow-MyHC)(<i>P</i><0.05), while suppressing mitochondrial biogenesis. In contrast, <i>GPX8</i> overexpression exhibited opposing results. Integrated multi-omics data from GWAS analyses were employed to identify expression quantitative trait locus (eQTLs) regulating <i>GPX8</i> expression. The effects of candidate SNPs on <i>GPX8</i> promoter activity were further validated using dual-luciferase reporter assays. Five candidate SNPs (rs335618489, rs325233940, rs32989756, rs322106839, and rs701033890) were identified within the <i>GPX8</i> promoter region. Among these, rs335618489-T, rs325233940-G, rs32989756-T, and rs322106839-G significantly upregulated <i>GPX8</i> expression level by altering promoter activity (<i>P</i><0.01), thereby influencing porcine muscle development traits. In summary, this study demonstrates that <i>GPX8</i> inhibits the myogenic differentiation of porcine skeletal muscle satellite cells and promotes the transition from fast-twitch to slow-twitch myofibers. Functional SNPs in the <i>GPX8</i> promoter region influence porcine muscle development by modulating <i>GPX8</i> expression, thereby providing valuable breeding targets for improving pork production.</p>","PeriodicalId":35536,"journal":{"name":"遗传","volume":"48 1","pages":"102-115"},"PeriodicalIF":0.0,"publicationDate":"2026-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145999169","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
According to the "Prepattern Hypothesis", the development of dorsal sensory organ precursors (SOP) in Drosophila melanogaster depends on the sequential regulation of prepattern genes, proneural genes, and neurogenic genes. In most cases, ectopic SOP formation caused by dysfunction of a single regulatory gene either exhibits spatial discontinuity or is restricted to proneural clusters. However, knockdown of the fred gene induces a novel phenotype of ectopic SOP that are spatially continuous and not confined to proneural cluster regions. This study reveals that fred knockdown-induced ectopic SOP formation is independent of proneural clusters, suggesting that nearly all wing imaginal disc cells possess neurogenic potential. Furthermore, we demonstrate that the prepattern gene pannier (pnr) cooperates with fred to regulate SOP cell fate through two distinct mechanisms: (1) pnr and fred are essential for endogenous SOP formation in the medial notum, while (2) they synergistically suppress SOP initiation outside proneural clusters. These findings challenge the canonical assertion in the "Prepattern Hypothesis" that SOP formation strictly relies on proneural cluster formation, thereby providing a critical extension to the hypothesis.
{"title":"<i>pnr</i> cooperate with <i>fred</i> to regulate SOP cell fate both positively and negatively in the medial notum of <i>Drosophila</i>.","authors":"Kai-Yue Song, Yi-Fei Zhang, Yao Zhang, Shu-Ting Long, Jian-Jun Peng, Yuan-Dong Sun, Xiao-Juan Cui, Ben-Shan Pan, Yu-Xin Chai, Xiao-Xia Wang, Jia-Hui Chen","doi":"10.16288/j.yczz.25-080","DOIUrl":"https://doi.org/10.16288/j.yczz.25-080","url":null,"abstract":"<p><p>According to the \"Prepattern Hypothesis\", the development of dorsal sensory organ precursors (SOP) in <i>Drosophila melanogaster</i> depends on the sequential regulation of prepattern genes, proneural genes, and neurogenic genes. In most cases, ectopic SOP formation caused by dysfunction of a single regulatory gene either exhibits spatial discontinuity or is restricted to proneural clusters. However, knockdown of the <i>fred</i> gene induces a novel phenotype of ectopic SOP that are spatially continuous and not confined to proneural cluster regions. This study reveals that <i>fred</i> knockdown-induced ectopic SOP formation is independent of proneural clusters, suggesting that nearly all wing imaginal disc cells possess neurogenic potential. Furthermore, we demonstrate that the prepattern gene <i>pannier</i> (<i>pnr</i>) cooperates with <i>fred</i> to regulate SOP cell fate through two distinct mechanisms: (1) <i>pnr</i> and <i>fred</i> are essential for endogenous SOP formation in the medial notum, while (2) they synergistically suppress SOP initiation outside proneural clusters. These findings challenge the canonical assertion in the \"Prepattern Hypothesis\" that SOP formation strictly relies on proneural cluster formation, thereby providing a critical extension to the hypothesis.</p>","PeriodicalId":35536,"journal":{"name":"遗传","volume":"48 1","pages":"87-101"},"PeriodicalIF":0.0,"publicationDate":"2026-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145999219","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Sarcopenia is an age-related degenerative disease characterized by progressive loss of skeletal muscle mass and function, resulting severe clinical outcomes such as falls, disability, and increased all-cause mortality, thereby significantly reducing the quality of life in elderly population. With China's rapid demographic aging, sarcopenia is emerging as a critical public health challenge. In this review, we elaborate the pathogenesis of sarcopenia, identifying metabolic imbalance and cellular oxidative stress as major contributing factors to muscle degeneration. Also, this article indicates that life-style, physiological condition and genetic factors jointly influence the population susceptibility and progression of sarcopenia. On one hand, this article lists the non-genetic factors that accelerate the progression of sarcopenia; and on the other hand, it elaborates the role of multiple genes in maintaining muscle function, and the risk associations between genetic mutations and sarcopenia which has been revealed in studies from population cohort and animal models. Moreover, this article summarizes how epigenetic factors regulate muscle metabolism and aging, and comprehensively discusses the intervention effects and clinical limitations of treatment, nutritional support, and exercise therapy. We hope this review can provide a theoretical framework to advance both fundamental research and clinical strategies for sarcopenia prevention and management.
{"title":"Pathogenesis and risk factors of sarcopenia.","authors":"Xin-Ran Li, Yan-Han Feng, Zhi-Dan Xia","doi":"10.16288/j.yczz.25-107","DOIUrl":"https://doi.org/10.16288/j.yczz.25-107","url":null,"abstract":"<p><p>Sarcopenia is an age-related degenerative disease characterized by progressive loss of skeletal muscle mass and function, resulting severe clinical outcomes such as falls, disability, and increased all-cause mortality, thereby significantly reducing the quality of life in elderly population. With China's rapid demographic aging, sarcopenia is emerging as a critical public health challenge. In this review, we elaborate the pathogenesis of sarcopenia, identifying metabolic imbalance and cellular oxidative stress as major contributing factors to muscle degeneration. Also, this article indicates that life-style, physiological condition and genetic factors jointly influence the population susceptibility and progression of sarcopenia. On one hand, this article lists the non-genetic factors that accelerate the progression of sarcopenia; and on the other hand, it elaborates the role of multiple genes in maintaining muscle function, and the risk associations between genetic mutations and sarcopenia which has been revealed in studies from population cohort and animal models. Moreover, this article summarizes how epigenetic factors regulate muscle metabolism and aging, and comprehensively discusses the intervention effects and clinical limitations of treatment, nutritional support, and exercise therapy. We hope this review can provide a theoretical framework to advance both fundamental research and clinical strategies for sarcopenia prevention and management.</p>","PeriodicalId":35536,"journal":{"name":"遗传","volume":"48 1","pages":"26-45"},"PeriodicalIF":0.0,"publicationDate":"2026-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145999253","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Shao-Hui Zheng, Yang Liu, Xin-Xin Xia, Yan-Mei Liu
Single nucleotide variants (SNVs) are among the primary pathogenic factors of human genetic diseases, accounting for a significant proportion of all mutation types. Conducting in-depth research on the pathogenic significance of these mutations in animal models is essential for understanding disease mechanisms and developing therapeutic strategies. The progress of such research largely depends on the continuous innovation and advancement of gene editing technologies. In recent years, base editing technology based on the CRISPR/Cas9 system has emerged, enabling precise conversion of individual nucleotides. Owing to its efficiency and convenience, base editing has been widely applied in gene therapy, the construction of animal models, and molecular breeding, bringing new breakthroughs and opportunities to life sciences and medical research. Zebrafish, with their advantages of small size, high fecundity, transparent embryos, and external development, have become an ideal model organism for studying disease mechanisms and drug screening. In this review, we summarize the development of CRISPR/Cas9-based base editing technologies, highlight the emergence of novel editing tools, and explore the application and progress of base editing in constructing precise zebrafish disease models.
{"title":"Advances in base editing technology and the construction of precise zebrafish disease models.","authors":"Shao-Hui Zheng, Yang Liu, Xin-Xin Xia, Yan-Mei Liu","doi":"10.16288/j.yczz.25-157","DOIUrl":"https://doi.org/10.16288/j.yczz.25-157","url":null,"abstract":"<p><p>Single nucleotide variants (SNVs) are among the primary pathogenic factors of human genetic diseases, accounting for a significant proportion of all mutation types. Conducting in-depth research on the pathogenic significance of these mutations in animal models is essential for understanding disease mechanisms and developing therapeutic strategies. The progress of such research largely depends on the continuous innovation and advancement of gene editing technologies. In recent years, base editing technology based on the CRISPR/Cas9 system has emerged, enabling precise conversion of individual nucleotides. Owing to its efficiency and convenience, base editing has been widely applied in gene therapy, the construction of animal models, and molecular breeding, bringing new breakthroughs and opportunities to life sciences and medical research. Zebrafish, with their advantages of small size, high fecundity, transparent embryos, and external development, have become an ideal model organism for studying disease mechanisms and drug screening. In this review, we summarize the development of CRISPR/Cas9-based base editing technologies, highlight the emergence of novel editing tools, and explore the application and progress of base editing in constructing precise zebrafish disease models.</p>","PeriodicalId":35536,"journal":{"name":"遗传","volume":"48 1","pages":"46-60"},"PeriodicalIF":0.0,"publicationDate":"2026-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145999204","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Bing-Huan Weng, Song-Bin Fu, Yu-Lin Jiang, He Wang, Kwong-Wai Choy, Bao-Sheng Zhu, Na Hao, He-Feng Huang, Lin He
Karyotype analysis is a routine prenatal diagnostic procedure in genetic diagnosis and counseling. Chromosomal polymorphisms are frequently observed in karyotyping. However, the absence of standardized criteria for defining polymorphisms has led to inconsistencies across laboratories in determining whether a specific chromosomal variant should be classified as a polymorphism and how it should be symbolized. This lack of consensus hinders the mutual recognition of karyotype reports and complicates the clinical interpretation of polymorphisms. In this expert consensus, we collected cases confirmed of various polymorphic karyotypes, examined their morphological features under different banding techniques, and compared the characteristics of G-, C-, and N-bands across polymorphism types. Based on these comparisons, we established defining features of polymorphic G-bands and categorized the polymorphisms in accordance with the International System for Human Cytogenomic Nomenclature (ISCN 2024). We further propose criteria for the identification, stepwise diagnostic procedures, models for informed consent, and frameworks for clinical interpretation. This consensus aims to standardize the recognition of chromosomal polymorphisms, facilitate the standardization of karyotype reports, promote consistency in genetic counseling, and address long-standing challenges in the field-such as the lack of uniform standards for polymorphism classification and divergent interpretations of the same variant in genetic counseling.
{"title":"Expert consensus on the morphological characteristics diagnostic criteria and genetic counseling of human chromosomal polymorphisms.","authors":"Bing-Huan Weng, Song-Bin Fu, Yu-Lin Jiang, He Wang, Kwong-Wai Choy, Bao-Sheng Zhu, Na Hao, He-Feng Huang, Lin He","doi":"10.16288/j.yczz.25-146","DOIUrl":"https://doi.org/10.16288/j.yczz.25-146","url":null,"abstract":"<p><p>Karyotype analysis is a routine prenatal diagnostic procedure in genetic diagnosis and counseling. Chromosomal polymorphisms are frequently observed in karyotyping. However, the absence of standardized criteria for defining polymorphisms has led to inconsistencies across laboratories in determining whether a specific chromosomal variant should be classified as a polymorphism and how it should be symbolized. This lack of consensus hinders the mutual recognition of karyotype reports and complicates the clinical interpretation of polymorphisms. In this expert consensus, we collected cases confirmed of various polymorphic karyotypes, examined their morphological features under different banding techniques, and compared the characteristics of G-, C-, and N-bands across polymorphism types. Based on these comparisons, we established defining features of polymorphic G-bands and categorized the polymorphisms in accordance with the International System for Human Cytogenomic Nomenclature (ISCN 2024). We further propose criteria for the identification, stepwise diagnostic procedures, models for informed consent, and frameworks for clinical interpretation. This consensus aims to standardize the recognition of chromosomal polymorphisms, facilitate the standardization of karyotype reports, promote consistency in genetic counseling, and address long-standing challenges in the field-such as the lack of uniform standards for polymorphism classification and divergent interpretations of the same variant in genetic counseling.</p>","PeriodicalId":35536,"journal":{"name":"遗传","volume":"48 1","pages":"3-25"},"PeriodicalIF":0.0,"publicationDate":"2026-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145999240","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Fetal chromosomal numerical abnormalities is a significant cause of pregnancy loss and birth defects. Ultrasound has emerged as a critical modality for fetal chromosomal anomaly screening due to its real-time capability, repeatability, and safety. However, its clinical application remains constrained by operator expertise variability and inconsistent image quality. The integration of artificial intelligence (AI) into conventional ultrasound has enabled the development of AI-based predictive models that overcome traditional screening limitations. These models demonstrate superior predictive performance compared to conventional methods while enabling simultaneous detection of rare chromosomal abnormalities. This review summarizes recent advances in synergistic applications of ultrasound and AI for fetal chromosomal aneuploidy prediction, comparatively analyzes the technical strengths and limitations of traditional versus AI-based predictive models, and discusses challenges including multicenter data standardization and model interpretability. These advancements provide novel directions for non-invasive precision prenatal screening.
{"title":"Application of ultrasound and artificial intelligence in the prediction of fetal chromosomal numerical abnormalities.","authors":"Lin-Yao Tang, Jing-Rou-Zi Wu, Ge Lin","doi":"10.16288/j.yczz.25-070","DOIUrl":"https://doi.org/10.16288/j.yczz.25-070","url":null,"abstract":"<p><p>Fetal chromosomal numerical abnormalities is a significant cause of pregnancy loss and birth defects. Ultrasound has emerged as a critical modality for fetal chromosomal anomaly screening due to its real-time capability, repeatability, and safety. However, its clinical application remains constrained by operator expertise variability and inconsistent image quality. The integration of artificial intelligence (AI) into conventional ultrasound has enabled the development of AI-based predictive models that overcome traditional screening limitations. These models demonstrate superior predictive performance compared to conventional methods while enabling simultaneous detection of rare chromosomal abnormalities. This review summarizes recent advances in synergistic applications of ultrasound and AI for fetal chromosomal aneuploidy prediction, comparatively analyzes the technical strengths and limitations of traditional versus AI-based predictive models, and discusses challenges including multicenter data standardization and model interpretability. These advancements provide novel directions for non-invasive precision prenatal screening.</p>","PeriodicalId":35536,"journal":{"name":"遗传","volume":"47 12","pages":"1326-1339"},"PeriodicalIF":0.0,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145775934","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yan-Xia Yan, Yu-Han Zhang, Zhen-Fang Wu, Zi-Cong Li
To explore new ways to improve canine cloning efficiency, this study compared the effects of different concentrations and treatment times of glycolysis promoter PS48 and epigenetic modifiers (DNA methylase inhibitor RG108 and histone deacetylase inhibitor Scriptaid) on the developmental ability of canine-porcine interspecies somatic cell nuclear transfer (iSCNT) embryos. The results showed that (1) 5 μmol/L PS48 treatment on canine ear fibroblasts (cEFs) and canine adipose tissue-derived mesenchymal stem cells (cAd-MSCs) for 24 h significantly enhanced subsequent iSCNT embryo development. The cleavage rate, 4-cell stage rate and 8-cell stage rate of iSCNT embryos produced from PS48-treated cEFs were significantly higher than those of control iSCNT embryos (46.90±1.64% vs 13.30±1.61%, 32.30±1.55% vs 8.26±0.88%, and 10.62±1.68% vs 5.50±0.84%; P<0.05). The cleavage and 4-cell stage rates of iSCNT embryos generated from PS48-treated cAd-MSCs were significantly higher than those of control iSCNT embryos (49.51±3.00% vs 31.25±2.73%, 26.21±2.08% vs 15.18±1.58%; P<0.05). (2) Treatment of cEFs and cAd-MSCs with 20 μmol/L RG108 for 48 h had no significant effect on the developmental efficiency of iSCNT embryos. Treatment of cEFs and cAd-MSCs with 0 nmol/L, 400 nmol/L, 500 nmol/L and 600 nmol/L Scriptaid for 24 h had no significant effect on the developmental efficiency of iSCNT embryos. (3) Treatment of iSCNT embryos derived from two types of donor cells with 20 μmol/L RG108 significantly promoted their developmental competence (P<0.05). Treatment of iSCNT embryos derived from cEFs with 500 nmol/L Scriptaid for 16 h significantly increased their cleavage and 4-cell stage rates (23.08±2.94% vs 9.47±1.70%, 18.68±3.25% vs 6.32±1.07%; P<0.05). This study established some new methods that can significantly improve the developmental efficiency of canine-porcine iSCNT embryos, thereby contributing to the development and application of canine somatic cell cloning technology.
为了探索提高犬克隆效率的新途径,本研究比较了不同浓度和处理次数的糖酵解启动子PS48和表观遗传修饰因子(DNA甲基化酶抑制剂RG108和组蛋白去乙酰化酶抑制剂Scriptaid)对犬-猪种间体细胞核移植(iSCNT)胚胎发育能力的影响。结果表明(1)5 μmol/L PS48处理犬耳成纤维细胞(cEFs)和犬脂肪组织源性间充质干细胞(cAd-MSCs) 24 h,显著促进后续iSCNT胚胎发育。ps48处理的cEFs产生的iSCNT胚胎的卵裂率、4细胞期率和8细胞期率均显著高于对照iSCNT胚胎(46.90±1.64% vs 13.30±1.61%,32.30±1.55% vs 8.26±0.88%,10.62±1.68% vs 5.50±0.84%;pv vs 31.25±2.73%,26.21±2.08% vs 15.18±1.58%
{"title":"Changes of epigenetic modification and donor cell metabolic status can improve the developmental efficiency of canine-porcine interspecies somatic cell nuclear transfer embryos.","authors":"Yan-Xia Yan, Yu-Han Zhang, Zhen-Fang Wu, Zi-Cong Li","doi":"10.16288/j.yczz.25-109","DOIUrl":"https://doi.org/10.16288/j.yczz.25-109","url":null,"abstract":"<p><p>To explore new ways to improve canine cloning efficiency, this study compared the effects of different concentrations and treatment times of glycolysis promoter PS48 and epigenetic modifiers (DNA methylase inhibitor RG108 and histone deacetylase inhibitor Scriptaid) on the developmental ability of canine-porcine interspecies somatic cell nuclear transfer (iSCNT) embryos. The results showed that (1) 5 μmol/L PS48 treatment on canine ear fibroblasts (cEFs) and canine adipose tissue-derived mesenchymal stem cells (cAd-MSCs) for 24 h significantly enhanced subsequent iSCNT embryo development. The cleavage rate, 4-cell stage rate and 8-cell stage rate of iSCNT embryos produced from PS48-treated cEFs were significantly higher than those of control iSCNT embryos (46.90±1.64% <i>vs</i> 13.30±1.61%, 32.30±1.55% <i>vs</i> 8.26±0.88%, and 10.62±1.68% <i>vs</i> 5.50±0.84%; <i>P</i><0.05). The cleavage and 4-cell stage rates of iSCNT embryos generated from PS48-treated cAd-MSCs were significantly higher than those of control iSCNT embryos (49.51±3.00% <i>vs</i> 31.25±2.73%, 26.21±2.08% <i>vs</i> 15.18±1.58%; <i>P</i><0.05). (2) Treatment of cEFs and cAd-MSCs with 20 μmol/L RG108 for 48 h had no significant effect on the developmental efficiency of iSCNT embryos. Treatment of cEFs and cAd-MSCs with 0 nmol/L, 400 nmol/L, 500 nmol/L and 600 nmol/L Scriptaid for 24 h had no significant effect on the developmental efficiency of iSCNT embryos. (3) Treatment of iSCNT embryos derived from two types of donor cells with 20 μmol/L RG108 significantly promoted their developmental competence (<i>P</i><0.05). Treatment of iSCNT embryos derived from cEFs with 500 nmol/L Scriptaid for 16 h significantly increased their cleavage and 4-cell stage rates (23.08±2.94% <i>vs</i> 9.47±1.70%, 18.68±3.25% <i>vs</i> 6.32±1.07%; <i>P</i><0.05). This study established some new methods that can significantly improve the developmental efficiency of canine-porcine iSCNT embryos, thereby contributing to the development and application of canine somatic cell cloning technology.</p>","PeriodicalId":35536,"journal":{"name":"遗传","volume":"47 12","pages":"1365-1376"},"PeriodicalIF":0.0,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145775952","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Bo-Xuan Zhao, Lei Gao, Zi-Qing Lin, Yuan-Yuan Shen, Jian-Xue Xiong, Wei Huang, Da-di Li, Pan-Xin Du, Shao-Qing Wen
Historical migration activities have played a crucial role in the exchange and dissemination of populations and cultures, leading to significant cultural transformations in certain regions. Previous research has often focused on historical documents and archaeological materials, with less emphasis on integrating genetic evidence for a more comprehensive analysis. The Shengjizui cemetery, located in Bishan District, Chongqing, is characterized by its row-style stone chamber tombs and has yielded numerous burial artifacts and human remains. In this study, we conducted a comparative analysis of some of the burial artifacts unearthed from the Shengjizui cemetery with those from tombs in the same region and period, determining that the cemetery dates back to the mid to late Ming Dynasty. The results also revealed that the granary jar culture of the Shengjizui population was influenced by the Huguang region. Furthermore, the analysis of uniparental genetic markers from human bone samples indicated that the cemetery was likely a clan burial site predominantly featuring the paternal genetic lineage D1ala1a1b-Z31611, while the maternal lineage was more akin to the Han population in Southeastern China. By combining archaeological typological comparisons with historical literature, these findings suggest that the Shengjizui population was influenced by migration activities during the Ming Dynasty, providing valuable genetic evidence for the study of local and migration history in Southwest China.
{"title":"Typological and ancient DNA evidences reveal the influence of Ming dynasty migration on the Shengjizui population in Bishan, Chongqing.","authors":"Bo-Xuan Zhao, Lei Gao, Zi-Qing Lin, Yuan-Yuan Shen, Jian-Xue Xiong, Wei Huang, Da-di Li, Pan-Xin Du, Shao-Qing Wen","doi":"10.16288/j.yczz.25-069","DOIUrl":"10.16288/j.yczz.25-069","url":null,"abstract":"<p><p>Historical migration activities have played a crucial role in the exchange and dissemination of populations and cultures, leading to significant cultural transformations in certain regions. Previous research has often focused on historical documents and archaeological materials, with less emphasis on integrating genetic evidence for a more comprehensive analysis. The Shengjizui cemetery, located in Bishan District, Chongqing, is characterized by its row-style stone chamber tombs and has yielded numerous burial artifacts and human remains. In this study, we conducted a comparative analysis of some of the burial artifacts unearthed from the Shengjizui cemetery with those from tombs in the same region and period, determining that the cemetery dates back to the mid to late Ming Dynasty. The results also revealed that the granary jar culture of the Shengjizui population was influenced by the Huguang region. Furthermore, the analysis of uniparental genetic markers from human bone samples indicated that the cemetery was likely a clan burial site predominantly featuring the paternal genetic lineage D1ala1a1b-Z31611, while the maternal lineage was more akin to the Han population in Southeastern China. By combining archaeological typological comparisons with historical literature, these findings suggest that the Shengjizui population was influenced by migration activities during the Ming Dynasty, providing valuable genetic evidence for the study of local and migration history in Southwest China.</p>","PeriodicalId":35536,"journal":{"name":"遗传","volume":"47 12","pages":"1340-1350"},"PeriodicalIF":0.0,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145775955","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}