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Genomics Vault: A framework for precision medicine data management 基因组库:精准医疗数据管理的框架
Pub Date : 2017-10-21 DOI: 10.18063/apm.v2i2.28
Bhupinder Bhullar, Guy Gross, Hakan Akozek
A mixture of fumaric acid esters (FAEs) is approved for the oral therapy of psoriasis. However, for a long time the active ingredient of this mixture was unknown. We reviewed the in vitro data available for the different FAEs present in the multi compound drug and elaborate how they may contribute to possible clinical effects. Although helpful overall, many in vitro data must be viewed critically because the concentrations used in the experiments exceed the plasma levels reached in patients. The data suggest that dimethylfumarate (DMF) is the most active compound, mediating the major therapeutic effect after metabolization into monomethylfumarate (MMF) via an according receptor expressed on target cells. Identifying the active pharmaceutical ingredient within a mixture of compounds helps to subsequently eliminate unnecessary, potentially harmful compounds. This provides a promising example for an alternative precision medicine approach in clinical practice.
富马酸酯(FAEs)的混合物被批准用于口服治疗牛皮癣。然而,很长一段时间,这种混合物的有效成分是未知的。我们回顾了多种复合药物中存在的不同FAEs的体外数据,并详细说明了它们如何有助于可能的临床效果。虽然总体上是有帮助的,但许多体外数据必须谨慎看待,因为实验中使用的浓度超过了患者的血浆水平。这些数据表明富马酸二甲酯(DMF)是最活跃的化合物,通过靶细胞上表达的相应受体代谢为富马酸一甲酯(MMF)后介导主要的治疗作用。确定化合物混合物中的活性药物成分有助于随后消除不必要的、潜在有害的化合物。这为临床实践中的替代精准医学方法提供了一个有希望的例子。
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引用次数: 0
What makes a good biomarker? 什么是好的生物标志物?
Pub Date : 2016-03-18 DOI: 10.18063/APM.2016.01.007
R. Holland
The last decade has seen an extraordinary amount of effort devoted in biomedical research to the field of biomarkers. There have been some notable successes with novel markers being adopted into clinical practice bringing clear clinical benefit to some patients — particularly with the increasing numbers of medicines being approved with companion diagnostics. However, it is fair to say that there has not yet been the numbers of clinically valuable biomarkers brought to medical practice that the research effort would seem to warrant. This paper evaluates examples of successful biomarkers, markers which might be considered partial successes and a few problematic examples and argues that more effort spent in the validation phase of marker development, and less in the discovery phase might be a more efficient way to allocate research resources.
在过去的十年里,生物医学研究在生物标志物领域投入了大量的努力。在临床实践中采用新的标记物方面取得了一些显著的成功,为一些患者带来了明显的临床益处——特别是越来越多的药物被批准与伴随诊断一起使用。然而,公平地说,目前还没有多少临床有价值的生物标志物被带到医疗实践中,这似乎是研究努力的保证。本文评估了成功的生物标记物的例子,可能被认为是部分成功的标记物和一些有问题的例子,并认为在标记物开发的验证阶段花费更多的精力,而在发现阶段花费更少的精力可能是分配研究资源的更有效的方法。
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引用次数: 21
Investigating the health-economic profiles of biomarker-driven immunosuppresion (BIO-DrIM) following solid organ transplantation 研究实体器官移植后生物标志物驱动免疫抑制(BIO-DrIM)的健康经济概况
Pub Date : 2016-03-17 DOI: 10.18063/APM.2016.01.004
Saskia Weber, M. Pietzsch, O. Bestard, J. Grinyó, O. Viklicky, P. Reinke
Immunosuppression (IS) following solid organ transplantation is indicated to avoid rejection but puts a significant burden on patients and healthcare systems due to life-long medication dependency and associated costs. Organ-tolerance with low or no IS medication has been observed, and might be forecasted with the help of appropriate biomarkers. Individualized treatments raise the question whether benefits of individualization outweigh the costs of stratification. This article outlines the importance of early economic evaluation in the context of biomarker-guided IS and discusses challenges that an economic evaluation should address, using the BIO-DrIM project as a reference example. We report on design aspects and health-economic study integration into several newly designed biomarker trials. In these studies, health-economic endpoints were defined to measure benefits of individualization and to compare them to the costs associated with stratification. Key economic outcomes to be collected are resource consumption and patient quality of life. Test accuracy of the biomarker-stratification is critical for the clinical success and the health-economic viability of an individualized reduced IS regime. However, IS regimes are not well standardized, rendering comparator choice difficult. The multi-national character of the trials adds further complexity that needs to be addressed. Developers of biomarker tests should stress the importance of integrating health-economic evaluations early into product-development.
实体器官移植后的免疫抑制(IS)可以避免排斥反应,但由于终身药物依赖和相关费用,给患者和医疗保健系统带来了沉重的负担。已经观察到低剂量或无IS药物的器官耐受性,并可能在适当的生物标志物的帮助下预测。个体化治疗提出了一个问题,即个体化治疗的益处是否大于分层治疗的成本。本文概述了在生物标志物引导的信息系统背景下早期经济评估的重要性,并以BIO-DrIM项目为例,讨论了经济评估应解决的挑战。我们报告了几个新设计的生物标志物试验的设计方面和健康经济研究的整合。在这些研究中,定义了健康经济终点来衡量个体化的效益,并将其与分层相关的成本进行比较。要收集的主要经济结果是资源消耗和患者生活质量。生物标记物分层的测试准确性对于个体化减少is方案的临床成功和健康经济可行性至关重要。然而,IS制度没有很好地标准化,使得比较国难以选择。审判的多国性质进一步增加了需要处理的复杂性。生物标志物测试的开发人员应强调将健康经济评估尽早纳入产品开发的重要性。
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引用次数: 1
Strategy to achieve biomarker-driven immunosuppression after solid organ transplantation by an academic-industry partnership within the European BIO-DrIM consortium 实现实体器官移植后生物标志物驱动免疫抑制的策略,由欧洲BIO-DrIM联盟内的学术-行业合作伙伴关系
Pub Date : 2016-03-17 DOI: 10.18063/APM.2016.01.001
H. Volk, B. Banas, F. Bemelman, O. Bestard, Sophie Brouard5, C. Cuturi, Josep M Grinyó, M. Hernandez-Fuentes, M. Koch, B. Nashan, I. Rebollo-Mesa, A. Sánchez‐Fueyo, B. Sawitzki, Ineke J M ten Berge, O. Viklicky, Kathryn Wood K, P. Reinke
Solid organ transplantation has emerged as the “gold standard” therapy for end-stage organ failure as it improves both quality of life and survival. Despite the progress in short-term graft survival, that is closely associated with the impressive reduction of acute rejections within the first year, long-term graft and patient survival remain almost unchanged and unsatisfactory. Incomplete control of chronic allograft injury but particularly the adverse effects of long-term immunosuppression, such as graft toxicity, diabetes, cardiovascular events, infections, and tumours continue to challenge the long-term success. In general, immunosuppression is applied as one-size-fits-all strategy. This can result in over- and under-immunosuppression of patients with low and high allo-responsiveness, respectively. Trial- and -error strategies to minimize or even completely wean of immunosuppression have a high failure rate. Consequently, there is an unmet medical need to develop biomarkers allowing objective risk stratification of transplant patients. To achieve this goal, we engaged in an academic-industrial partnership. The central focus of the European-wide BIO-DrIM consortium (BIOmarker-Driven IMmmunosuppression) is the implementation of biomarker-guided strategies for personalizing immunosuppress- ion to improve the long-term outcome and to decrease the adverse effects and costs of chronic immunosuppression in solid organ transplant patients. The concept includes four innovative investigator-driven clinical trials designed by the consortium.
实体器官移植已成为终末期器官衰竭的“金标准”治疗方法,因为它可以提高生活质量和生存率。尽管移植物短期存活的进展与第一年急性排斥反应的显著减少密切相关,但移植物和患者的长期存活几乎没有变化,令人不满意。慢性同种异体移植物损伤的不完全控制,特别是长期免疫抑制的不良影响,如移植物毒性、糖尿病、心血管事件、感染和肿瘤,继续挑战着长期成功。一般来说,免疫抑制是一种一刀切的策略。这可能分别导致低和高同种异体反应性患者免疫抑制过度和免疫抑制不足。尽量减少甚至完全放弃免疫抑制的反复试验策略失败率很高。因此,开发允许移植患者客观风险分层的生物标志物是未满足的医学需求。为了实现这一目标,我们建立了学术-工业合作伙伴关系。全欧洲BIO-DrIM联盟(生物标志物驱动免疫抑制)的中心重点是实施生物标志物引导的个性化免疫抑制策略,以改善实体器官移植患者的长期预后,降低慢性免疫抑制的不良反应和成本。该概念包括由该联盟设计的四项创新的研究者驱动的临床试验。
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引用次数: 1
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