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The Activity of α-glucosidase Inhibition of Pediococcus Acidilactici BAMA 4 Isolated from “Naniura” Traditional Foods from North Sumatera, Indonesia 印尼北苏门答腊“Naniura”传统食品中嗜酸性Pediococcus BAMA 4 α-葡萄糖苷酶抑制活性的研究
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-09-25 DOI: 10.2174/1874091x-v17-230921-2023-2
Dewi Riastawaty, Ermi Girsang, Edy Fachrial, Chrismis Novalinda Ginting, Finna Piska, Ali Napiah Nasution
Background: Type 2 diabetes is caused by unhealthy lifestyles, such as consuming foods rich in simple sugars and lack of exercise. One of the treatment therapies for this disease is α-glucosidase inhibitors. Some strains of the lactic acid bacteria (LAB) group typically exhibit α-glucosidase inhibitory activity, antimicrobial activity, acids and bile salt tolerance, and probiotic status. Objective: This study aims to isolate LAB from naniura, characterize and test its activity as an α-glucosidase inhibitor, as well as identify those with the highest activity. Methods: The method used to molecularly identify potentially good LAB was through the amplification of the 16S rRNA gene. Results: This study obtained a total of 9 strains using BAMA codes 1, 2, 3, 4, 5, 6, 7, 8, and 9. The cocci cell activity, gram-positive, and antibacterial activity of BAMA 4 against E.coli was 7.54 mm, while against S. aureus was 8.05 mm. The percentage of viability in acid and bile salt is 28.7% and 68.6%, respectively. Additionally, the proportion of α-glucosidase inhibition is 65%. Discussion: The BAMA 4 strain is a species of Pediococcus acidilactici . Pediococcus is a genus of gram-positive lactic acid bacteria in the Lactobacillacea family. Conclusion: BAMA 4 strain produced antibacterial optimally and its cells survived the growth in acid and bile conditions. The percentage of probiotics was relevantly high in this activity. This study will be helpful for other in-vivo research.
背景:2型糖尿病是由不健康的生活方式引起的,如食用富含单糖的食物和缺乏锻炼。这种疾病的治疗方法之一是α-葡萄糖苷酶抑制剂。乳酸菌(LAB)群的某些菌株具有典型的α-葡萄糖苷酶抑制活性、抗菌活性、酸和胆盐耐受性以及益生菌状态。目的:从牛磺酸中分离乳酸菌,对其α-葡萄糖苷酶抑制剂的活性进行表征和测定,并鉴定活性最高的菌株。方法:采用16S rRNA基因扩增的方法对潜在优质乳酸菌进行分子鉴定。结果:本研究共获得9株使用BAMA编码1、2、3、4、5、6、7、8、9的菌株。BAMA - 4对大肠杆菌和金黄色葡萄球菌的活性分别为7.54 mm和8.05 mm。在酸和胆盐中存活率分别为28.7%和68.6%。α-葡萄糖苷酶抑制率为65%。讨论:BAMA 4菌株是一种酸碱性Pediococcus。Pediococcus是乳杆菌科革兰氏阳性乳酸菌的一个属。结论:BAMA 4菌株抑菌效果最佳,其细胞在酸、胆条件下均能存活。该活性中益生菌的比例较高。本研究对其他体内研究具有一定的指导意义。
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引用次数: 0
Nitric oxide and its metabolites in the critical phase of illness: rapid biomarkers in the making. 疾病关键阶段的一氧化氮及其代谢物:快速生物标志物的形成。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2013-01-01 Epub Date: 2013-03-08 DOI: 10.2174/1874091X01307010024
Asad I Mian, Mayank Aranke, Nathan S Bryan

The potential of nitric oxide (NO) as a rapid assay biomarker, one that could provide a quantum leap in acute care, remains largely untapped. NO plays a crucial role as bronchodilator, vasodilator and inflammatory mediator. The main objective of this review is to demonstrate how NO is a molecule of heavy interest in various acute disease states along the emergency department and critical care spectrum: respiratory infections, central nervous system infections, asthma, acute kidney injury, sepsis, septic shock, and myocardial ischemia, to name just a few. We discuss how NO and its oxidative metabolites, nitrite and nitrate, are readily detectable in several body compartments and fluids, and as such they are associated with many of the pathophysiological processes mentioned above. With methods such as high performance liquid chromatography and chemiluminescence these entities are relatively easy and inexpensive to analyze. Emphasis is placed on diagnostic rapidity, as this relates directly to quality of care in acute care situations. Further, a rationale is provided for more bench, translational and clinical research in the field of NO biomarkers for such settings. Developing standard protocols for the aforementioned disease states, centered on concentrations of NO and its metabolites, can prove to revolutionize diagnostics and prognostication along a spectrum of clinical care. We present a strong case for developing these biomarkers more as point-of-care assays with potential of color gradient test strips for rapid screening of disease entities in acute care and beyond. This will be relevant to global health.

一氧化氮(NO)作为一种快速测定生物标志物的潜力在很大程度上仍未得到开发,它可以为急性护理提供巨大的飞跃。一氧化氮作为支气管扩张剂、血管扩张剂和炎症介质起着至关重要的作用。本综述的主要目的是证明一氧化氮是如何在急诊科和重症监护谱上的各种急性疾病状态中引起极大兴趣的分子:呼吸道感染、中枢神经系统感染、哮喘、急性肾损伤、败血症、感染性休克和心肌缺血,仅举几例。我们讨论了一氧化氮及其氧化代谢物,亚硝酸盐和硝酸盐,是如何在几个身体隔间和液体中容易检测到的,因此它们与上述许多病理生理过程有关。用高效液相色谱和化学发光等方法分析这些实体相对容易和便宜。重点放在诊断速度上,因为这直接关系到急性护理情况下的护理质量。此外,在这种情况下,为NO生物标志物领域的更多实验、转化和临床研究提供了理论依据。为上述疾病状态制定标准方案,以NO及其代谢物的浓度为中心,可以在临床护理的范围内彻底改变诊断和预测。我们提出了一个强有力的案例,开发这些生物标志物更多地作为护理点检测,具有快速筛选急症护理及其他疾病实体的颜色梯度试纸的潜力。这将与全球卫生有关。
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引用次数: 17
Protein Kinase A Subunit α Catalytic and A Kinase Anchoring Protein 79 in Human Placental Mitochondria. 人胎盘线粒体蛋白激酶A亚基α催化和A激酶锚定蛋白79。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2012-01-01 Epub Date: 2012-04-11 DOI: 10.2174/1874091X01206010023
Maggie Pui Chi Ma, Murray Thomson

Components of protein phosphorylation signalling systems have been discovered in mitochondria and it has been proposed that these molecules modulate processes including oxidative phosphorylation, apoptosis and steroidogenesis. We used electrophoresis and Western blots probed with specific antibodies to protein kinase A α catalytic subunit (PKAα Cat) and A kinase anchoring protein of approximately 79 kDa molecular weight (AKAP79) to demonstrate the presence of these two proteins in human placental mitochondria. Heavy mitochondria characteristic of cytotrophoblast were separated from light mitochondria characteristic of syncytiotrophoblast by centrifugation. PKAα Cat and AKAP79 were present in both heavy and light mitochondria with no significant difference in concentration. Sucrose density gradient separation of submitochondrial fractions indicated PKAα Cat is located predominantly in the outer membrane whereas AKAP79 is present mainly in the contact site fractions. These data indicate that PKAα Cat is present in the cytoplasm, nucleus and mitochondria of placental cells. AKAP79 is also present in human placental mitochondria but there may be anchoring proteins other than AKAP79 responsible for fixing PKA to the outer membrane. PKA may play roles in mitochondrial protein phosphorylation systems in both cytotrophoblast and syncytiotrophoblast.

在线粒体中发现了蛋白质磷酸化信号系统的组成部分,并提出这些分子调节包括氧化磷酸化、细胞凋亡和甾体生成在内的过程。我们使用蛋白激酶Aα催化亚基(PKAα Cat)和分子量约为79 kDa的激酶锚定蛋白(AKAP79)特异性抗体进行电泳和Western blots检测,证实这两种蛋白存在于人胎盘线粒体中。用离心分离法分离出具有细胞滋养层特征的重线粒体和具有合胞滋养层特征的轻线粒体。PKAα Cat和AKAP79均存在于重质线粒体和轻质线粒体中,但浓度差异不显著。线粒体亚区蔗糖密度梯度分离表明,PKAα Cat主要位于外膜,而AKAP79主要存在于接触部位。这些数据表明,PKAα Cat存在于胎盘细胞的细胞质、细胞核和线粒体中。AKAP79也存在于人类胎盘线粒体中,但除了AKAP79之外,可能还有其他锚定蛋白负责将PKA固定在外膜上。PKA可能在细胞滋养细胞和合胞滋养细胞线粒体蛋白磷酸化系统中发挥作用。
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引用次数: 10
High G+C Content of Herpes Simplex Virus DNA: Proposed Role in Protection Against Retrotransposon Insertion. 单纯疱疹病毒DNA的高G+C含量:对反转录转座子插入的保护作用
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2007-12-04 DOI: 10.2174/1874091X00701010033
Jay C Brown

The herpes simplex virus dsDNA genome is distinguished by an unusually high G+C nucleotide content. HSV-1 and HSV-2, for instance, have GC contents of 68% and 70% respectively, while that of the host (human) genome is 41%. To determine how GC content varies with genome location, GC content was measured separately in coding and intergenic regions of HSV-1 DNA. The results showed that the 75 genes constitute a uniform population with a mean GC content of 66.9 +/- 4.1%. In contrast, intergenic regions were found in two non-overlapping populations, one with a mean GC content (69.3 +/- 4.6% n=32) similar to the coding regions and another where the GC content is lower (56.0 +/- 4.9 n=30). Compared to other regions of the genome, intergenic regions with reduced GC content were found to be enriched in local GC minima, CACACA sequences and a primary target sequence (TTAAAA) for retrotransposition events. The results are interpreted to suggest that a high GC content is part of the way HSV-1 protects its genes from invasion by mobile genetic elements active during cell differentiation in the nervous system.

单纯疱疹病毒dsDNA基因组的特点是异常高的G+C核苷酸含量。例如,HSV-1和HSV-2的GC含量分别为68%和70%,而宿主(人类)基因组的GC含量为41%。为了确定GC含量随基因组位置的变化,分别测定了HSV-1 DNA编码区和基因间区GC含量。结果表明,75个基因组成一个统一的群体,平均GC含量为66.9 +/- 4.1%。相比之下,在两个不重叠的种群中发现了基因间区,一个种群的GC平均含量(69.3 +/- 4.6% n=32)与编码区相似,另一个种群的GC含量较低(56.0 +/- 4.9 n=30)。与基因组的其他区域相比,GC含量降低的基因间区域富含局部GC最小值、CACACA序列和反转录转位事件的主要靶序列(TTAAAA)。结果表明,高GC含量是HSV-1保护其基因免受神经系统细胞分化过程中活跃的移动遗传元件入侵的部分方式。
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引用次数: 24
Lipid rafts and caveolae in signaling by growth factor receptors. 脂筏和小泡在生长因子受体信号传导中的作用。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2007-01-01 Epub Date: 2007-09-13 DOI: 10.2174/1874091X00701010012
Angela de Laurentiis, Lorna Donovan, Alexandre Arcaro

Lipid rafts and caveolae are microdomains of the plasma membrane enriched in sphingolipids and cholesterol, and hence are less fluid than the remainder of the membrane. Caveolae have an invaginated structure, while lipid rafts are flat regions of the membrane. The two types of microdomains have different protein compositions (growth factor receptors and their downstream molecules) suggesting that lipid rafts and caveolae have a role in the regulation of signaling by these receptors. The purpose of this review is to discuss this model, and the implications that it might have regarding a potential role for lipid rafts and caveolae in human cancer. Particular attention will be paid to the epidermal growth factor receptor, for which the largest amount of information is available. It has been proposed that caveolins act as tumor suppressors. The role of lipid rafts is less clear, but they seem to be capable of acting as 'signaling platforms', in which signal initiation and propagation can occur efficiently.

脂筏和小窝是富含鞘脂和胆固醇的质膜的微结构域,因此比膜的其余部分流动性更小。洞穴具有内陷结构,而脂筏是膜的平坦区域。这两种类型的微结构域具有不同的蛋白质组成(生长因子受体及其下游分子),这表明脂筏和小窝在这些受体的信号调节中发挥作用。这篇综述的目的是讨论这个模型,以及它可能对脂质筏和小窝在人类癌症中的潜在作用产生的影响。将特别关注表皮生长因子受体,其信息量最大。有人提出小窝蛋白作为肿瘤抑制剂。脂筏的作用尚不清楚,但它们似乎能够充当“信号平台”,在其中可以有效地进行信号启动和传播。
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引用次数: 74
Increased endogenous nitric oxide release by iron chelation and purinergic activation in the rat carotid body. 通过铁螯合和嘌呤能激活增加大鼠颈动脉体内源性一氧化氮释放。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2007-01-01 Epub Date: 2007-06-15 DOI: 10.2174/1874091X00701010001
Man-Lung Fung, Meifang Li, Sukhamay Lahiri

We examined the hypothesis that hypoxic chemotransduction with stabilization of HIF-1 and activation of purinoceptors stimulate the endogenous NO production in the rat carotid body. The effects of blockade of purinoceptors with suramin, or blockade of HIF-1alpha hydroxylation by suppressing prolyl hydroxylase (PAH) activity on the endogenous NO release measured electrochemically by microsensor inserted into the isolated carotid body superfused with bicarbonate-buffer were examined. Suramin did not change the resting NO level under normoxic conditions but it significantly decreased the hypoxia-induced NO elevation in a dose-dependent manner. Suramin (100muM) blocked the NO response to acute hypoxia by 53%. Intracellular iron chelator, ciclopirox olamine (CPX) significantly increased the resting NO release close to the hypoxic level, which was reversed by FeSO(4) or blocked by L-NMMA. Also, PAH inhibition with dimethy-loxalylglycine (DMOG) moderately increased the resting NO release. In the presence of CPX and DMOG the resting NO release was increased to the hypoxic level. Collectively, results suggest that iron chelation and purinoceptor stimulation play a role in the hypoxic chemotransduction for an increase in the endogenous NO production in the rat carotid body.

我们检验了低氧化学转导与HIF-1的稳定和嘌呤受体的激活刺激大鼠颈动脉体内内源性NO产生的假设。用苏拉明阻断嘌呤受体,或通过抑制脯氨酰羟化酶(PAH)活性阻断hif -1 - α羟化作用,对内源性NO释放的影响进行了研究。在常氧条件下,苏拉明不改变静息NO水平,但显著降低缺氧诱导的NO升高,且呈剂量依赖性。苏拉明(100muM)对急性缺氧NO反应的阻断率为53%。细胞内铁螯合剂环匹罗胺(CPX)显著增加静息NO释放,接近缺氧水平,FeSO逆转(4)或L-NMMA阻断。此外,二甲氧基酰甘氨酸(DMOG)抑制多环芳烃适度增加静息NO释放。在CPX和DMOG的作用下,静息NO释放增加至缺氧水平。综上所述,铁螯合和嘌呤受体刺激在大鼠颈动脉体的缺氧化学转导中发挥作用,增加内源性NO的产生。
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引用次数: 5
期刊
Open Biochemistry Journal
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