Journal of Biological Research-Thessaloniki最新文献

Background: The barn owl, a nocturnal raptor with cosmopolitan distribution, shows a great adaptability to different environments. Regarding prey, the barn owl is a rather selective species, but if changes in the abundance of the selected prey occur, it becomes an opportunistic predator and easily incorporates other prey in its diet, using a wide range of prey species and foraging habitats. Small rodents are usually the prey mostly used. Compared to the populations of north and eastern Europe, barn owl populations in the Mediterranean area have been the least studied. In Cyprus, where barn owl is a common bird species, there are no studies on its diet and feeding ecology. This study was carried out to contribute to the spatial and temporal patterns barn owl diet in Cyprus also providing information on small mammals' presence and species composition on the island.

Methods: This study was based on 1407 regurgitated pellet analysis that were collected from 26 sites representing six major habitat types on central and southern Cyprus from summer 2013 to summer 2014. The diet of the barn owl was described in terms of seasonal average biomass and numerical percentages of each prey species and compared by Kruskal-Wallis test. Seasonal prey diversity and evenness indices were also calculated. Principal component analysis (PCA) was performed on the prey biomass proportion data assigned to six major habitat types with regard to elevation, vegetation and human uses.

Results: Low prey diversity was found comprised mainly of rodents (overall means 96.2 and 95.7% by number and biomass, respectively). Mice followed by rats were most important prey whereas insectivores, birds and insects were minor components of the owl's diet. Evenness and diversity values were relatively similar among seasons. PCA differentiated mainly between lowland areas where mice were more abundant prey and mountainous areas where rats dominated in the diet. Insectivores correlated with birds, prey types characterizing several lowland and highland habitats.

Conclusions: The barn owl prey composition in Cyprus suggests an opportunistic foraging behavior, low prey species diversity with variations in the main rodent prey that could be explained by their distribution, seasonal activity and habitat preferences.

Background: Alcohol is one of the most commonly consumed neurotoxins by humans. Its negative effect on bone health is known for a long time. However, its impact on qualitative and quantitative 2D characteristics of the compact bone is still unclear. Therefore, the aim of this study was to investigate in detail the effects of subchronic alcohol exposure on compact and trabecular bone tissues microstructure of laboratory mice using 2D and 3D imaging methods. Ten clinically healthy 12 weeks-old mice (males) were randomly divided into two groups. Animals from experimental group (group E; n = 5) drank a solution composed of 15% ethanol and water (1.7 g 100% ethanol kg^-1 b.w. per day) for 8 weeks, while those from control group (group C; n = 5) drank only water.

Results: Subchronic exposure to alcohol leads to several changes in qualitative 2D characteristics of the compact bone such as the presence of primary vascular radial bone tissue in pars anterior of endosteal border and a higher number of resorption lacunae (five times more) in the middle part of substantia compacta. Morphometrical 2D evaluations of the compact bone showed significantly increased sizes of primary osteons' vascular canals (p < 0.05) in mice from the experimental group (E group). Sizes of Haversian canals and secondary osteons were not affected by alcohol consumption. In mice from the E group, significantly lower values for relative bone volume and bone mineral density of the compact bone were observed. In the trabecular bone, decreased values for bone volume, trabecular number, trabecular thickness and bone surface (p < 0.05) were documented.

Conclusions: Alcohol decreased not only bone volume and density of the compact bone, but it also reduced trabecular bone volume and leads to trabecular thinning. It caused vasodilation of primary osteons' vascular canals and increased porosity in the compact bone.

The backbone of this endeavour consists of three major components as they appear in the title. My intention is to summarise, as explicitly as possible, both existing and novel data on the occurrence of parthenogenetic rare males assessing their role in conveying sets of genetic information between asexual strains and sexual Artemia species to and fro. Additionally, an assemblage of strong indications and evidence is quoted aiming to unravel possible scenarios of the repeated emergence of asexuality in the brine shrimp and its significance in evolutionary processes involved in speciation.

Background: The Hellenic Seas are influenced by on-going environmental changes and the introduction of alien species, which are expected to have an impact on their biodiversity. This study contributes to the knowledge of the Hellenic marine gastropod biodiversity, expanding data over the entire Greek territory, during the period from October 2008 to March 2017.

Results: This work presents 45 species of gastropods not previously reported from Greece or reported only once, belonging to 19 families. From those species, one (Horologica sp.) is, most probably, an undescribed species, 17 are new for the Eastern Mediterranean Sea and 40 are new for the Hellenic fauna. Main taxonomic characteristics and ecological information such as habitat, distribution and origin, are given and discussed.

Conclusions: By this report, the Hellenic gastropod biodiversity is enriched by 40 new records, out of which, 17 are new for the Eastern Mediterranean Sea, 4 are Lessepsian migrants previously reported for the Mediterranean Sea and 1 is probably a new species.

Background: Seagrass species have been recommended as biomonitors of environmental condition and as tools for phytoremediation, due to their ability to concentrate anthropogenic chemicals. This study aims to provide novel information on metal accumulation in seagrasses under laboratory conditions to support their use as a tool in the evaluation and abatement of contamination in the field. We investigated the kinetics of cadmium uptake into adult leaf blades, leaf sheaths, rhizomes and roots of Cymodocea nodosa in exposure concentrations within the range of cadmium levels in industrial wastewater (0.5-40 mg L^-1).

Results: A Michaelis-Menten-type equation satisfactorily described cadmium accumulation kinetics in seagrass parts, particularly at 0.5-5 or 10 mg L^-1. However, an S equation best described the uptake kinetics in rhizomes at 5 mg L^-1 and roots at 10 and 20 mg L^-1. Equilibrium concentration and uptake rate tended to increase with the exposure concentration, indicating that seagrass displays a remarkable accumulation capacity of cadmium and reflect high cadmium levels in the surrounding medium. Concerning leaf blades and rhizomes, the bioconcentration factor at equilibrium (range 73.3-404.3 and 14.3-86.3, respectively) was generally lower at higher exposure concentrations, indicating a gradual reduction of available binding sites. Leaf blades and roots accumulated more cadmium with higher rate than sheaths and rhizomes. Uptake kinetics in leaf blades displayed a better fit to the Michaelis-Menten-type equation than those in the remaining plant parts, particularly at 0.5-10 mg L^-1. A marked variation in tissue concentrations mainly after the steady state was observed at 20 and 40 mg L^-1, indicative of the stress induced on seagrass cells. The maximum concentrations observed in seagrass parts at 5 and 10 mg L^-1 were comparatively higher than those previously reported for other seagrasses incubated to similar exposure concentrations.

Conclusions: Cymodocea nodosa displays a remarkable cadmium accumulation capacity and reflects high cadmium levels in the surrounding medium. Kinetic models satisfactorily describe cadmium uptake in seagrass parts, primarily in adult leaf blades, at high exposure concentrations, permitting to predict cadmium accumulation in field situations. Cymodocea nodosa appeared to be a valuable tool in the evaluation and abatement of cadmium contamination in coastal areas.

Background: Microbial lipases catalyze a broad spectrum of reactions and are enzymes of considerable biotechnological interest. The focus of this study was the isolation of new lipase genes, intending to discover novel lipases whose products bear interesting biochemical and structural features and may have a potential to act as valuable biocatalysts in industrial applications.

Results: A novel lipase gene (lipSm), from a new environmental Stenotrophomonas maltophilia strain, Psi-1, originating from a sludge sample from Psittaleia (Greece), was cloned and sequenced. lipSm was further overexpressed in E. coli BL21(DE3) and the overproduced enzyme LipSm was purified and analyzed in respect to its biochemical and kinetic properties. In silico analysis of LipSm revealed that it is taxonomically related to several uncharacterized lipases from different genera, which constitute a unique clade, markedly different from all other previously described bacterial lipase families. All members of this clade displayed identical, conserved consensus sequence motifs, i.e. the catalytic triad (S, D, H), and an unusual, amongst bacterial lipases, Y-type oxyanion hole. 3D-modeling revealed the presence of a lid domain structure, which allows LipSm to act on small ester substrates without interfacial activation. In addition, the high percentage of alanine residues along with the occurrence of the AXXXA motif nine times in LipSm suggest that it is a thermostable lipase, a feature verified experimentally, since LipSm was still active after heating at 70 °C for 30 min.

Conclusions: The phylogenetic analysis of LipSm suggests the establishment of a new bacterial lipase family (XVIII) with LipSm being its first characterized member. Furthermore, LipSm is alkaliphilic, thermostable and lacks the requirement for interfacial activation, when small substrates are used. These properties make LipSm a potential advantageous biocatalyst in industry and biotechnology.

Human immunodeficiency virus (HIV) still poses enigmatic threats to human life. This virus has mastered in bypassing anti retroviral therapy leading to patients' death. Circulating viruses are phenomenal for the disease outcome. This hypothesis proposes a therapeutic strategy utilizing receptor-integrated hematopoietic, erythroid and red blood cells. Here, HIV specific receptors trap circulating viruses that enter erythrocyte cytoplasm and form inactive integration complex. This model depicts easy, effective removal of circulating HIV without any adverse effect.

Background: Halophilic organisms may thrive in or tolerate high salt concentrations. They have been studied for decades and a considerable number of papers reporting new halophilic species are being published every year. However, an extensive collection of these salt-loving organisms does not exist nowadays. Halophilic life forms have representatives from all three life domains, Archaea, Bacteria and Eukarya. The purpose of this study was to search for all documented halophilic species in the scientific literature and accommodate this information in the form of an online database.

Results: We recorded more than 1000 halophilic species from the scientific literature. From these, 21.9% belong to Archaea, 50.1% to Bacteria and 27.9% to Eukaryotes. Our records contain basic information such as the salinity that a particular organism was found, its taxonomy and genomic information via NCBI and other links. The online database named "HaloDom" can be accessed at http://www.halodom.bio.auth.gr.

Conclusions: Over the last few years, data on halophiles are growing fast. Compared to previous efforts, this new halophiles database expands its coverage to all life domains and offers a valuable reference system for studies in biotechnology, early life evolution and comparative genomics.

Background: Korarima (Aframomum corrorima) is a perennial and aromatic herb native and widely distributed in southwestern Ethiopia. It is known for its fine flavor as a spice in various Ethiopian traditional dishes. Few molecular studies have been performed on this species so far. In the present paper, the ISSR technique was employed to study the genetic diversity in populations of cultivated A. corrorima.

Results: Seven ISSR primers produced a total of 86 clearly scorable DNA bands. High levels of genetic diversity were detected in cultivated A. corrorima (percentage of polymorphic bands = 97.67%, gene diversity = 0.35, Shannon's information index = 0.52). Analysis of molecular variance (AMOVA) showed that 27.47% of the variation is attributed to the variation among populations and 72.53% to the variation within populations. The F_st (0.28) value showed a significant (p < 0.0001) genetic differentiation among populations. This was supported by the high coefficient of gene differentiation (G_st = 0.32) and low estimated gene flow (Nm = 1.08). A neighbor-joining dendrogram showed that the thirteen cultivated populations were separated into three clusters, which was in good accordance with the results provided by the two dimensional and three dimensional coordinate analyses. However, the clusters did not reveal clear pattern of populations clustering according to their geographic origin. This could be due to human mediated transfer of genetic material among different localities.

Conclusion: The genetic diversity in populations of A. corrorima from the southwestern part of Ethiopia was relatively high. This finding should be taken into account when conservation actions, management policies for the species and site identification for in situ and ex situ conservation strategies are developed. Mizan Teferi II population displayed the highest genetic diversity; this population should be considered as the key site in designing conservation strategies for this crop. In addition, Jimma I and Jimma II populations with lowest genetic diversity, should also be considered due to the putative risk of extinction that they face because of the low genetic diversity.

Background: Soybean is a common alternative protein source of plant origin in aquafeeds as it has a reasonably balanced amino acid profile and is widely available. This study aimed to investigate the influence of partial substitution of fish meal with soy meal on cytoprotective pathways and apoptosis in the digestive system of common dentex (Dentex dentex), using the activation of Hsp70, p38 MAPK, Bcl-2 and caspase-3. The experimental approach involved feeding of common dentex with three isoprotein and isoenergetic diets that contained fish meal as a protein source (FM), partial replacement of fish meal by soy meal 25% (SM25) and 40% (SM40) for 3 months.

Results: The SM40 diet induced Hsp70 activation only in the middle part of intestine. On the other hand, both SM25 and SM40 diets diminished the phosphorylation of p38 MAPK in the anterior and the middle part of intestine, whereas only SM25 induced p38 MAPK phosphorylation in the stomach. Moreover, a decrease in the levels of caspase-3 activity was observed in the middle and posterior intestine, as well as in the stomach after feeding with SM25 diets. Furthermore, Bcl-2 levels were increased by SM40 in the anterior and by SM25 in the middle part of intestine.

Conclusions: SM25 and SM40 diets elicited a tissue and soy concentration specific cellular and cell protective response in the different parts of the digestive tract in common dentex.