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Graphs in biomedical image analysis, and overlapped cell on tissue dataset for histopathology : 5th MICCAI Workshop, GRAIL 2023 and 1st MICCAI Challenge, OCELOT 2023, held in conjunction with MICCAI 2023, Vancouver, BC, Canada, Septembe...最新文献

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Multi-Head Graph Convolutional Network for Structural Connectome Classification. 用于结构连接组分类的多头图卷积网络
Anees Kazi, Jocelyn Mora, Bruce Fischl, Adrian V Dalca, Iman Aganj

We tackle classification based on brain connectivity derived from diffusion magnetic resonance images. We propose a machine-learning model inspired by graph convolutional networks (GCNs), which takes a brain-connectivity input graph and processes the data separately through a parallel GCN mechanism with multiple heads. The proposed network is a simple design that employs different heads involving graph convolutions focused on edges and nodes, thoroughly capturing representations from the input data. To test the ability of our model to extract complementary and representative features from brain connectivity data, we chose the task of sex classification. This quantifies the degree to which the connectome varies depending on the sex, which is important for improving our understanding of health and disease in both sexes. We show experiments on two publicly available datasets: PREVENT-AD (347 subjects) and OASIS3 (771 subjects). The proposed model demonstrates the highest performance compared to the existing machine-learning algorithms we tested, including classical methods and (graph and non-graph) deep learning. We provide a detailed analysis of each component of our model.

我们的研究基于从扩散磁共振图像中获得的大脑连接性进行分类。我们提出了一种受图卷积网络(GCN)启发的机器学习模型,该模型采用大脑连接输入图,通过多头并行 GCN 机制分别处理数据。所提议的网络设计简单,采用了不同的头,涉及以边缘和节点为重点的图卷积,能彻底捕捉输入数据中的表征。为了测试我们的模型从大脑连接数据中提取互补性和代表性特征的能力,我们选择了性别分类任务。这可以量化连接组因性别而异的程度,对于提高我们对两性健康和疾病的认识非常重要。我们展示了在两个公开数据集上进行的实验:PREVENT-AD(347 名受试者)和 OASIS3(771 名受试者)。与我们测试过的现有机器学习算法(包括经典方法和(图和非图)深度学习)相比,所提出的模型表现出了最高的性能。我们对模型的每个组成部分进行了详细分析。
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Graphs in biomedical image analysis, and overlapped cell on tissue dataset for histopathology : 5th MICCAI Workshop, GRAIL 2023 and 1st MICCAI Challenge, OCELOT 2023, held in conjunction with MICCAI 2023, Vancouver, BC, Canada, Septembe...
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