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Early Detection of Rapid Cystic Fibrosis Disease Progression Tailored to Point of Care: A Proof-of-Principle Study. 针对护理点的快速囊性纤维化疾病进展的早期检测:一项原理验证研究
Rhonda Szczesniak, Cole Brokamp, Weiji Su, Gary L McPhail, John Pestian, John P Clancy

Slowing cystic fibrosis (CF) lung disease progression is crucial to survival, but point-of-care technologies aimed at early detection-and possibly prevention-of rapid lung function decline are limited. This proof-of-principle study leverages a rich national patient registry and follow-up data on a local CF cohort to build an algorithm and prototype prognostic tool aimed at early detection of rapid lung function decline. The algorithm was developed using a novel longitudinal analysis of lung function (measured as forced expiratory volume in 1 s of % predicted, FEV1). Covariates included clinical and demographic characteristics selected from the registry based on information criterion. Preliminary assessment of algorithm performance suggested excellent predictive accuracy and earlier detection of rapid decline than standard of care being applied at a local center. Graphical displays were presented and evaluated for clinical utility. Predictions from the algorithms and chosen graphical displays were translated into a prototype web application using RShiny and underwent iterative development based on clinician feedback. This paper suggests that the algorithm and its translation could offer a means for earlier detection and treatment of rapid decline, providing clinicians with a viable point-of-care technology to intervene prior to irreversible lung damage.

减缓囊性纤维化(CF)肺部疾病的进展对生存至关重要,但旨在早期发现并可能预防肺功能快速衰退的即时护理技术是有限的。这项原理验证研究利用了丰富的国家患者登记和当地CF队列的随访数据,建立了一种算法和原型预后工具,旨在早期发现肺功能快速下降。该算法采用了一种新颖的肺功能纵向分析(以用力呼气量(预测值的1 / 5%,FEV1)测量)。协变量包括根据信息标准从注册表中选择的临床和人口统计学特征。对算法性能的初步评估表明,与当地中心应用的标准护理相比,该算法具有出色的预测准确性和较早的快速衰退检测。图像显示并评估临床应用。来自算法的预测和选择的图形显示被翻译成使用RShiny的原型web应用程序,并根据临床医生的反馈进行迭代开发。本文表明,该算法及其翻译可以为早期检测和治疗快速衰退提供一种手段,为临床医生提供一种可行的护理点技术,在不可逆的肺损伤之前进行干预。
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引用次数: 3
Pharmacodynamic modeling of propofol-induced general anesthesia in young adults. 异丙酚诱导青少年全身麻醉的药效学模型。
Sourish Chakravarty, Ksenia Nikolaeva, Devika Kishnan, Francisco J Flores, Patrick L Purdon, Emery N Brown

Target controlled infusion (TCI) of intraveneous anesthetics can assist clinical practitioners to provide improved care for General Anesthesia (GA). Pharmacokinetic/Pharmacodynamic (PK/PD) models help in relating the anesthetic drug infusion to observed brain activity inferred from electroencephalogram (EEG) signals. The parameters in popular population PK/PD models for propofol-induced GA (Marsh and Schnider models) are either verified based on proprietary functions of the EEG signal which are difficult to correlate with the neurophysiological models of anesthesia, or the marker itself needs to be estimated simultaneously with the PD model. Both these factors make these existing paradigms challenging to apply in real-time context where a patient-specific tuning of parameters is desired. In this work, we propose a simpler EEG marker from frequency domain description of EEG and develop two corresponding PK/PD modeling approaches which differ in whether they use existing population-level PK models (approach 1) or not (approach 2). We use a simple deterministic parameter estimation approach to identify the unknown PK/PD model parameters from an existing human EEG data-set. We infer that both approaches 1 and 2 yield similar and reasonably good fits to the marker data. This work can be useful in developing patient-specific TCI strategies to induce GA.

静脉麻醉药靶控输注(TCI)可以帮助临床医生为全身麻醉(GA)提供更好的护理。药代动力学/药效学(PK/PD)模型有助于将麻醉药物输注与从脑电图(EEG)信号推断的观察到的脑活动联系起来。常用的异丙酚诱导GA的群体PK/PD模型(Marsh和Schnider模型)中的参数要么是基于脑电图信号的专有函数来验证的,而这些函数很难与麻醉的神经生理模型相关联,要么是标记物本身需要与PD模型同时估计。这两个因素使得现有的范例难以在实时环境中应用,因为在实时环境中需要对特定于患者的参数进行调整。在这项工作中,我们从EEG的频域描述中提出了一种更简单的EEG标记,并开发了两种相应的PK/PD建模方法,不同的是它们是否使用现有的群体水平的PK模型(方法1)或不使用方法2)。我们使用一种简单的确定性参数估计方法从现有的人类EEG数据集中识别未知的PK/PD模型参数。我们推断,两种方法1和2产生相似的,相当好的拟合标记数据。这项工作可用于制定患者特异性TCI策略以诱导GA。
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引用次数: 6
Formant Frequency-based Speech Enhancement Technique to improve Intelligibility for hearing aid users with smartphone as an assistive device. 基于共振频率的语音增强技术提高智能手机助听器用户的可理解性。
Gautam S Bhat, Nikhil Shankar, Chandan K A Reddy, Issa M S Panahi

In this paper, we present a Speech Enhancement (SE) method implemented on a smartphone, and this arrangement functions as an assistive device to hearing aids (HA). Many benchmark single channel SE algorithms implemented on HAs provide considerable improvement in speech quality, while speech intelligibility improvement still remains a prime challenge. The proposed SE method based on Log spectral amplitude estimator improves speech intelligibility in the noisy real world acoustic environment using the priori information of formant frequency locations. The formant frequency information avails us to control the amount of speech distortion in these frequency bands, thereby controlling speech distortion. We introduce a 'scaling' parameter for the SE gain function, which controls the gains over the non-formant frequency band, allowing the HA users to customize the playback speech using a smartphone application to their listening preference. Objective intelligibility measures show the effectiveness of the proposed SE method. Subjective results reflect the suitability of the developed Speech Enhancement application in real-world noisy conditions at SNR levels of -5 dB, 0 dB and 5 dB.

在本文中,我们提出了一种在智能手机上实现的语音增强(SE)方法,该方法可作为助听器(HA)的辅助设备。在HAs上实现的许多基准单通道SE算法提供了相当大的语音质量改进,但语音清晰度的提高仍然是一个主要挑战。本文提出的基于对数谱幅值估计的SE方法利用共振峰频率位置的先验信息,提高了噪声环境下语音的可理解性。形成峰频率信息使我们能够控制这些频带内的语音失真量,从而控制语音失真。我们为SE增益函数引入了一个“缩放”参数,该参数控制非共振频带的增益,允许HA用户使用智能手机应用程序根据他们的收听偏好定制播放语音。客观可理解度测试表明了该方法的有效性。主观结果反映了所开发的语音增强应用在信噪比为-5 dB、0 dB和5 dB的真实噪声条件下的适用性。
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引用次数: 9
Agile Co-Development for Clinical Adoption and Adaptation of Innovative Technologies. 临床采用和适应创新技术的敏捷协同开发。
Vaishnavi Kannan, Mujeeb A Basit, Josh E Youngblood, Trenton D Bryson, Seth M Toomay, Jason S Fish, Duwayne L Willett

Even the most innovative healthcare technologies provide patient benefits only when adopted by clinicians and/or patients in actual practice. Yet realizing optimal positive impact from a new technology for the widest range of individuals who would benefit remains elusive. In software and new product development, iterative rapid-cycle "agile" methods more rapidly provide value, mitigate failure risks, and adapt to customer feedback. Co-development between builders and customers is a key agile principle. But how does one accomplish co-development with busy clinicians? In this paper, we discuss four practical agile co-development practices found helpful clinically: (1) User stories for lightweight requirements; (2) Time-boxed development for collaborative design and prompt course correction; (3) Automated acceptance test driven development, with clinician-vetted specifications; and (4) Monitoring of clinician interactions after release, for rapid-cycle product adaptation and evolution. In the coming wave of innovation in healthcare apps ushered in by open APIs to EHRs, learning rapidly what new product features work well for clinicians and patients will become even more crucial.

即使是最具创新性的医疗保健技术,也只有在临床医生和/或患者在实际实践中采用时才能为患者提供益处。然而,实现一项新技术对最广泛的个人的最佳积极影响仍然是难以捉摸的。在软件和新产品开发中,迭代的快速周期“敏捷”方法可以更快地提供价值,减轻故障风险,并适应客户反馈。构建者和客户之间的共同开发是一个关键的敏捷原则。但是如何与忙碌的临床医生完成共同开发呢?在本文中,我们讨论了四种临床上有用的敏捷协同开发实践:(1)轻量级需求的用户故事;(2)定时开发,协同设计,及时修正课程;(3)自动化验收测试驱动开发,具有临床医生审查的规范;(4)监测释放后临床医生的相互作用,以实现产品的快速适应和进化。在即将到来的医疗保健应用创新浪潮中,由开放的电子病历api引领,快速了解哪些新产品功能对临床医生和患者有效将变得更加重要。
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引用次数: 12
Multivariate Voronoi Outlier Detection for Time Series. 时间序列的多变量Voronoi离群值检测。
Chris E Zwilling, Michelle Yongmei Wang

Outlier detection is a primary step in many data mining and analysis applications, including healthcare and medical research. This paper presents a general method to identify outliers in multivariate time series based on a Voronoi diagram, which we call Multivariate Voronoi Outlier Detection (MVOD). The approach copes with outliers in a multivariate framework, via designing and extracting effective attributes or features from the data that can take parametric or nonparametric forms. Voronoi diagrams allow for automatic configuration of the neighborhood relationship of the data points, which facilitates the differentiation of outliers and non-outliers. Experimental evaluation demonstrates that our MVOD is an accurate, sensitive, and robust method for detecting outliers in multivariate time series data.

异常值检测是许多数据挖掘和分析应用程序的主要步骤,包括医疗保健和医学研究。本文提出了一种基于Voronoi图的多变量时间序列异常点识别的通用方法,我们称之为多变量Voronoi异常点检测(multivariate Voronoi Outlier Detection, MVOD)。该方法通过从数据中设计和提取有效的属性或特征来处理多元框架中的异常值,这些属性或特征可以采取参数或非参数形式。Voronoi图允许自动配置数据点的邻域关系,这有助于区分离群值和非离群值。实验评估表明,我们的MVOD方法是一种准确、灵敏、鲁棒的多变量时间序列数据异常值检测方法。
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引用次数: 5
Feasibility of a hybrid elastographic-microfluidic device to rapidly process and assess pancreatic cancer biopsies for pathologists. 为病理学家快速处理和评估胰腺癌活检的混合弹性成像-微流控装置的可行性。
Ronnie Das, Thu-Mai Nguyen, Saniel D Lim, Matt O'Donnell, Ruikang K Wang, Eric J Seibel

In this study, our collaborative research group explored the possibility of incorporating ultrasound elastography technology with a microfluidic device that is designed to prepare fine needle core biopsies (CBs; L=0.5-2.0 cm, D=0.4-1.2 mm) for pancreatic cancer diagnosis. For the first time, elastographic techniques were employed to measure shear wave velocity in fresh (3.7 m/s) and formalin-fixed (14.7 m/s) pancreatic CBs. Shear wave velocity did not vary whether fixed specimens were free on a microscope slide, or constrained within glass microfluidic channels: 11.5±1.9 v. 11.8±2.1 m/s. 4% agarose inclusions were also embedded within 1% agarose hydrogels to simulate cysts, neoplastic, or necrotic tissue within CBs. Inclusions were successfully visualized and measured using optical coherence elastography. These preliminary experiments demonstrate in a rudimentary fashion that elastographic measurements of pancreatic CBs may be incorporated with our microfluidic device. The rapid mapping of CB stiffness may provide qualitative spatial information for pathologists to determine a more accurate diagnosis for patients.

在这项研究中,我们的合作研究小组探索了将超声弹性成像技术与微流体装置相结合的可能性,该装置旨在制备细针芯活检(CBs;L=0.5-2.0 cm, D=0.4-1.2 mm)用于胰腺癌诊断。首次采用弹性成像技术测量新鲜(3.7 m/s)和福尔马林固定(14.7 m/s)胰腺CBs的横波速度。无论固定标本是自由放置在显微镜载玻片上,还是被限制在玻璃微流体通道内,剪切波速都没有变化:11.5±1.9 vs . 11.8±2.1 m/s。4%琼脂糖包体也被包埋在1%琼脂糖水凝胶中,以模拟CBs内的囊肿、肿瘤或坏死组织。利用光学相干弹性成像成功地对夹杂物进行了可视化和测量。这些初步的实验以一种基本的方式表明,胰腺CBs的弹性测量可以与我们的微流体装置相结合。CB刚度的快速映射可以为病理学家提供定性的空间信息,以确定更准确的患者诊断。
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引用次数: 1
Med-vest: A wearable sensory platform. Med-vest:一种可穿戴的传感平台。
R A Durfee, J Venugopalan, Jiacheng Ren, M D Wang

Sickle cell disease is a genetic mutation that causes sickling of the red blood cells, affecting between 90,000 and 100,000 Americans. Researchers must develop methods of data acquisition capable of maximizing both the amount of data being collected and types of data being collected to form the most accurate diagnosis and treatment for patients. Popular data acquisition forms are the use of mobile phones, sensory systems, and wearable technology. In this paper, we attempt to bridge the gap between the three, combining a wearable sensory system with the computation and communication power of mobile phones. We propose the application of sickle cell disease as a structure around which to design a textile-based data acquisition system.

镰状细胞病是一种导致红细胞镰状坏死的基因突变,影响了9万到10万美国人。研究人员必须开发出能够最大限度地收集数据量和数据类型的数据采集方法,以形成对患者最准确的诊断和治疗。流行的数据采集形式是使用移动电话、传感系统和可穿戴技术。在本文中,我们试图弥合这三者之间的差距,将可穿戴的传感系统与手机的计算和通信能力相结合。我们提出应用镰状细胞病作为一个结构,围绕它来设计一个基于纺织品的数据采集系统。
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引用次数: 1
Low-Cost Disposable Cartridge for Performing a White Blood Cell Count and Partial Differential at the Point-of-Care. 低成本的一次性药筒用于执行白细胞计数和在护理点的部分差异。
Catherine E Majors, Michal E Pawlowski, Tomasz Tkaczyk, Rebecca R Richards-Kortum

Being able to perform a white blood cell (WBC) count and differential is a crucial laboratory test for basic diagnostic practices. In this paper, we demonstrate proof of concept results for a disposable cartridge that could be used to perform a WBC count and 3-part differential at the point-of-care. The cartridge is composed of a glass slide, a layer of transfer tape, and a glass cover slip and incorporates acridine orange for cell staining and sub-type differentiation; the stained blood is then imaged, and image analysis techniques return a WBC count and 3-part differential. The cartridge was tested on a laboratory microscope with 3 normal samples, and had promising results with 85.7% of images resulting in a WBC count with ±15% of the true value. Further, the 3-part differential concentrations determined using the disposable cartridge had strong correlations with the true concentrations (R2 values of 0.9986, 0.9421, and 0.6942 for granulocytes, lymphocytes, and monocytes, respectively). Preliminary designs for a low-cost, portable microscope have been created and are currently being prototyped.

能够进行白细胞计数和鉴别是基本诊断实践中至关重要的实验室测试。在本文中,我们演示了一次性药筒的概念证明结果,该药筒可用于在护理点执行WBC计数和3部分差分。该墨盒由玻璃载玻片、一层转移带和一层玻璃盖玻片组成,并包含用于细胞染色和亚型分化的吖啶橙;然后对染色的血液进行成像,图像分析技术返回WBC计数和3部分差值。在实验室显微镜下对3个正常样本进行了测试,85.7%的图像显示WBC计数为真实值的±15%,结果很有希望。此外,使用一次性药筒测定的3组分差异浓度与真实浓度有很强的相关性(粒细胞、淋巴细胞和单核细胞的R2分别为0.9986、0.9421和0.6942)。一种低成本便携式显微镜的初步设计已经完成,目前正在制作原型。
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引用次数: 11
Design and Performance of a Low-Cost, Handheld Reader for Diagnosing Anemia in Blantyre, Malawi. 马拉维布兰太尔低成本贫血诊断手持阅读器的设计与性能。
Meaghan Bond, Jessica Mvula, Elizabeth Molyneux, Rebecca Richards-Kortum

Anemia, a condition characterized by insufficient hemoglobin, affects 56.2% of pregnant women and 66.1% of children under five in low-resource countries. Though hemoglobin concentration measurement is the most common laboratory test in the world, the high cost of disposables (>$1.00 per test in Malawi) limits its availability in these settings. We have demonstrated a spectrophotometric method that reduces the per-test cost of anemia diagnosis to under $0.01 by using chromatography paper as the only disposable. Improvements in the hand-held reader, including using laser modules and a reference photodiode, enabled repeatable results within and across devices. We evaluated this method by analyzing capillary blood samples from 70 patients in the pediatric ward of Queen Elizabeth Central Hospital, Blantyre, Malawi. ~90% of these samples were within 2 g/dL of the standard value, with higher accuracy on more anemic samples. Current work aims to improve this accuracy by converting the hemoglobin in the sample to the more stable form methemoglobin.

在资源匮乏国家,56.2%的孕妇和66.1%的五岁以下儿童患有以血红蛋白不足为特征的贫血。虽然血红蛋白浓度测定是世界上最常见的实验室检测,但一次性检测的高成本(在马拉维每次检测> 1美元)限制了其在这些环境中的可用性。我们已经展示了一种分光光度法,通过使用色谱纸作为唯一的一次性材料,将贫血诊断的每次测试成本降低到0.01美元以下。手持式阅读器的改进,包括使用激光模块和参考光电二极管,使设备内部和设备之间的结果可重复。我们通过分析马拉维布兰太尔伊丽莎白女王中心医院儿科病房70名患者的毛细血管血样来评估这种方法。~90%的样品与标准值的误差在2 g/dL以内,对较贫血的样品准确度较高。目前的工作旨在通过将样品中的血红蛋白转化为更稳定的高铁血红蛋白来提高这种准确性。
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引用次数: 9
期刊
... Health innovations and point-of-care technologies conference. Health innovations and point-of-care technologies conference
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