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Optical Coherence Tomography: Basic Concepts and Applications in Neuroscience Research. 光学相干层析成像:神经科学研究的基本概念和应用。
Pub Date : 2017-01-01 Epub Date: 2017-10-29 DOI: 10.1155/2017/3409327
Mobin Ibne Mokbul

Optical coherence tomography is a micrometer-scale imaging modality that permits label-free, cross-sectional imaging of biological tissue microstructure using tissue backscattering properties. After its invention in the 1990s, OCT is now being widely used in several branches of neuroscience as well as other fields of biomedical science. This review study reports an overview of OCT's applications in several branches or subbranches of neuroscience such as neuroimaging, neurology, neurosurgery, neuropathology, and neuroembryology. This study has briefly summarized the recent applications of OCT in neuroscience research, including a comparison, and provides a discussion of the remaining challenges and opportunities in addition to future directions. The chief aim of the review study is to draw the attention of a broad neuroscience community in order to maximize the applications of OCT in other branches of neuroscience too, and the study may also serve as a benchmark for future OCT-based neuroscience research. Despite some limitations, OCT proves to be a useful imaging tool in both basic and clinical neuroscience research.

光学相干断层扫描是一种微米级成像模式,允许使用组织反向散射特性对生物组织微观结构进行无标记的横截面成像。OCT在20世纪90年代发明后,现在被广泛应用于神经科学的几个分支以及生物医学的其他领域。这项综述研究概述了OCT在神经科学的几个分支或分支中的应用,如神经成像、神经病学、神经外科、神经病理学和神经胚胎学。本研究简要总结了OCT在神经科学研究中的最新应用,包括比较,并讨论了除未来方向外的剩余挑战和机遇。该综述研究的主要目的是引起广大神经科学界的注意,以最大限度地提高OCT在神经科学其他分支中的应用,该研究也可能成为未来基于OCT的神经科学研究的基准。尽管存在一些局限性,OCT被证明是基础和临床神经科学研究中有用的成像工具。
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引用次数: 0
Automated Detection of Motion Artefacts in MR Imaging Using Decision Forests. 基于决策森林的磁共振成像运动伪影自动检测。
Pub Date : 2017-01-01 Epub Date: 2017-06-11 DOI: 10.1155/2017/4501647
Benedikt Lorch, Ghislain Vaillant, Christian Baumgartner, Wenjia Bai, Daniel Rueckert, Andreas Maier

The acquisition of a Magnetic Resonance (MR) scan usually takes longer than subjects can remain still. Movement of the subject such as bulk patient motion or respiratory motion degrades the image quality and its diagnostic value by producing image artefacts like ghosting, blurring, and smearing. This work focuses on the effect of motion on the reconstructed slices and the detection of motion artefacts in the reconstruction by using a supervised learning approach based on random decision forests. Both the effects of bulk patient motion occurring at various time points in the acquisition on head scans and the effects of respiratory motion on cardiac scans are studied. Evaluation is performed on synthetic images where motion artefacts have been introduced by altering the k-space data according to a motion trajectory, using the three common k-space sampling patterns: Cartesian, radial, and spiral. The results suggest that a machine learning approach is well capable of learning the characteristics of motion artefacts and subsequently detecting motion artefacts with a confidence that depends on the sampling pattern.

磁共振(MR)扫描的获取通常需要比受试者保持静止时间更长的时间。受试者的运动,如病人的整体运动或呼吸运动,会产生诸如重影、模糊和涂抹等图像伪影,从而降低图像质量及其诊断价值。本文主要研究运动对重建切片的影响,并利用基于随机决策森林的监督学习方法检测重建过程中的运动伪影。研究了头部扫描采集过程中不同时间点患者整体运动的影响以及呼吸运动对心脏扫描的影响。对合成图像进行评估,其中通过根据运动轨迹改变k空间数据引入了运动伪影,使用三种常见的k空间采样模式:笛卡尔、径向和螺旋。结果表明,机器学习方法能够很好地学习运动伪影的特征,并随后以依赖于采样模式的置信度检测运动伪影。
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引用次数: 29
Experimental Gait Analysis to Study Stress Distribution of the Human Foot. 实验步态分析研究人体足部应力分布。
Pub Date : 2017-01-01 Epub Date: 2017-11-02 DOI: 10.1155/2017/3432074
Vidya K Nandikolla, Robin Bochen, Steven Meza, Allan Garcia

Researchers and clinicians are increasingly using plantar pressure and force measurement system to evaluate foot functions. This research evaluates the quality and reliability of a Tekscan HR mat to study the plantar pressures and forces acting during walking, running, jumping, and standing of healthy subjects. The following regions of the foot were investigated: heel, mid foot, metatarsophalangeal joint, hallux, and the toes. The arches of both feet of the three healthy subjects in the gait analysis were presented which addresses the balancing issues of the body during locomotion. The results indicated that the peaks at the big toe (79.4 ± 8.5 N/cm2, p = 0.0001) were the maximum compared to forefoot (40.3 ± 3.3 N/cm2, p = 0.001), to midfoot (7.5 ± 1.3 N/cm2, p = 0.001), and to heel (27.8 ± 3.9 N/cm2, p = 0.0002) for jump activity. The running activity demonstrated similar results as jump where the maximum peak pressures were absorbed at the big toe region. The heel region during running (86.3 ± 12.6 N/cm2, p = 0.001) showed three times the pressure peak compared to the jump land (27.8 ± 3.9 N/cm2, p = 0.0002) activity. The measurement system proved to be highly capable of detecting heel strike and toe-off moments.

研究人员和临床医生越来越多地使用足底压力和力测量系统来评估足部功能。本研究评估了Tekscan HR垫的质量和可靠性,以研究健康受试者在行走、跑步、跳跃和站立时的足底压力和力。研究了足部的以下区域:脚后跟、足中部、跖趾关节、拇趾和脚趾。在步态分析中,提出了三个健康受试者的双脚弓,解决了运动过程中身体的平衡问题。结果表明:与前足(40.3±3.3 N/cm2, p = 0.001)、中足(7.5±1.3 N/cm2, p = 0.001)和足跟(27.8±3.9 N/cm2, p = 0.0002)相比,大脚趾(79.4±8.5 N/cm2, p = 0.0001)的跳跃活动峰值最大;跑步活动显示了与跳跃相似的结果,最大峰值压力在大脚趾区域被吸收。跑步时足跟区压力峰值(86.3±12.6 N/cm2, p = 0.001)是跳地区压力峰值(27.8±3.9 N/cm2, p = 0.0002)的3倍。该测量系统被证明具有很强的检测鞋跟撞击力矩和脚趾脱落力矩的能力。
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引用次数: 29
Optimization of a Functionally Graded Material Stem in the Femoral Component of a Cemented Hip Arthroplasty: Influence of Dimensionality of FGM. 优化骨水泥髋关节成形术股骨组件中的功能分级材料柄:FGM 尺寸的影响。
Pub Date : 2017-01-01 Epub Date: 2017-06-21 DOI: 10.1155/2017/3069351
Abdellah Ait Moussa, Rohan Yadav

The longevity of hip prostheses is contingent on the stability of the implant within the cavity of the femur bone. The cemented fixation was mostly adopted owing to offering the immediate stability from cement-stem and cement-bone bonding interfaces after implant surgery. Yet cement damage and stress shielding of the bone were proven to adversely affect the lifelong stability of the implant, especially among younger subjects who tend to have an active lifestyle. The geometry and material distribution of the implant can be optimized more efficiently with a three-dimensional realistic design of a functionally graded material (FGM). We report an efficient numerical technique for achieving this objective, for maximum performance stress shielding and the rate of early accumulation of cement damage were concurrently minimized. Results indicated less stress shielding and similar cement damage rates with a 2D-FGM implant compared to 1D-FGM and Titanium alloy implants.

髋关节假体的使用寿命取决于假体在股骨头腔内的稳定性。植入手术后,骨水泥-骨干和骨水泥-骨结合界面可提供即时稳定性,因此大多采用骨水泥固定。但事实证明,骨水泥的损坏和骨的应力屏蔽会对植入物的终生稳定性产生不利影响,尤其是对那些生活方式活跃的年轻受试者而言。通过对功能分级材料(FGM)进行三维实际设计,可以更有效地优化种植体的几何形状和材料分布。我们报告了一种实现这一目标的高效数值技术,该技术可最大程度地发挥应力屏蔽作用,同时将骨水泥损伤的早期累积率降至最低。结果表明,与一维功能梯度材料和钛合金种植体相比,二维功能梯度材料种植体的应力屏蔽更小,骨水泥损伤率相似。
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引用次数: 0
Gradient Artefact Correction and Evaluation of the EEG Recorded Simultaneously with fMRI Data Using Optimised Moving-Average. 利用优化移动平均对与fMRI同时记录的脑电进行梯度伪影校正和评价。
Pub Date : 2016-01-01 Epub Date: 2016-06-28 DOI: 10.1155/2016/9614323
José L Ferreira, Yan Wu, René M H Besseling, Rolf Lamerichs, Ronald M Aarts

Over the past years, coregistered EEG-fMRI has emerged as a powerful tool for neurocognitive research and correlated studies, mainly because of the possibility of integrating the high temporal resolution of the EEG with the high spatial resolution of fMRI. However, additional work remains to be done in order to improve the quality of the EEG signal recorded simultaneously with fMRI data, in particular regarding the occurrence of the gradient artefact. We devised and presented in this paper a novel approach for gradient artefact correction based upon optimised moving-average filtering (OMA). OMA makes use of the iterative application of a moving-average filter, which allows estimation and cancellation of the gradient artefact by integration. Additionally, OMA is capable of performing the attenuation of the periodic artefact activity without accurate information about MRI triggers. By using our proposed approach, it is possible to achieve a better balance than the slice-average subtraction as performed by the established AAS method, regarding EEG signal preservation together with effective suppression of the gradient artefact. Since the stochastic nature of the EEG signal complicates the assessment of EEG preservation after application of the gradient artefact correction, we also propose a simple and effective method to account for it.

近年来,脑电-功能磁共振共登记已成为神经认知研究和相关研究的有力工具,主要是因为脑电的高时间分辨率与功能磁共振的高空间分辨率相结合的可能性。然而,为了提高与fMRI数据同时记录的脑电图信号的质量,特别是关于梯度伪影的出现,还需要做更多的工作。本文提出了一种基于最优移动平均滤波(OMA)的梯度伪影校正方法。OMA利用移动平均滤波器的迭代应用,它允许通过积分估计和消除梯度伪影。此外,OMA能够在没有关于MRI触发器的准确信息的情况下执行周期性伪影活动的衰减。通过使用我们提出的方法,在脑电信号保存和有效抑制梯度伪影方面,可以实现比已建立的AAS方法所执行的切片平均减法更好的平衡。由于脑电信号的随机性使应用梯度伪影校正后的脑电信号保存评估复杂化,我们还提出了一种简单有效的方法来考虑它。
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引用次数: 10
Possibilities of Preoperative Medical Models Made by 3D Printing or Additive Manufacturing. 术前医学模型的可能性由3D打印或增材制造。
Pub Date : 2016-01-01 Epub Date: 2016-06-28 DOI: 10.1155/2016/6191526
Mika Salmi

Most of the 3D printing applications of preoperative models have been focused on dental and craniomaxillofacial area. The purpose of this paper is to demonstrate the possibilities in other application areas and give examples of the current possibilities. The approach was to communicate with the surgeons with different fields about their needs related preoperative models and try to produce preoperative models that satisfy those needs. Ten different kinds of examples of possibilities were selected to be shown in this paper and aspects related imaging, 3D model reconstruction, 3D modeling, and 3D printing were presented. Examples were heart, ankle, backbone, knee, and pelvis with different processes and materials. Software types required were Osirix, 3Data Expert, and Rhinoceros. Different 3D printing processes were binder jetting and material extrusion. This paper presents a wide range of possibilities related to 3D printing of preoperative models. Surgeons should be aware of the new possibilities and in most cases help from mechanical engineering side is needed.

3D打印在术前模型中的应用主要集中在牙科和颅颌面区域。本文的目的是展示其他应用领域的可能性,并举例说明当前的可能性。方法是与不同领域的外科医生沟通他们对术前模型的需求,并尝试产生满足这些需求的术前模型。本文选取了十种不同类型的可能性示例,并介绍了与成像、3D模型重建、3D建模和3D打印相关的方面。例如心脏、踝关节、脊柱、膝关节和骨盆,它们具有不同的突起和材料。所需的软件类型是Osirix、3Data Expert和Rhinoceros。不同的3D打印工艺是粘合剂喷射和材料挤压。本文介绍了与术前模型3D打印相关的广泛可能性。外科医生应该意识到新的可能性,在大多数情况下,需要机械工程方面的帮助。
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引用次数: 40
Potential of M-Wave Elicited by Double Pulse for Muscle Fatigue Evaluation in Intermittent Muscle Activation by Functional Electrical Stimulation for Motor Rehabilitation. 双脉冲诱发的m波电位在功能电刺激间歇肌活化运动康复中的肌肉疲劳评价。
Pub Date : 2016-01-01 Epub Date: 2016-03-27 DOI: 10.1155/2016/6957287
Naoto Miura, Takashi Watanabe

Clinical studies on application of functional electrical stimulation (FES) to motor rehabilitation have been increasing. However, muscle fatigue appears early in the course of repetitive movement production training by FES. Although M-wave variables were suggested to be reliable indices of muscle fatigue in long lasting constant electrical stimulation under the isometric condition, the ability of M-wave needs more studies under intermittent stimulation condition, because the intervals between electrical stimulations help recovery of muscle activation level. In this paper, M-waves elicited by double pulses were examined in muscle fatigue evaluation during repetitive movements considering rehabilitation training with surface electrical stimulation. M-waves were measured under the two conditions of repetitive stimulation: knee extension force production under the isometric condition and the dynamic movement condition by knee joint angle control. Amplitude of M-wave elicited by the 2nd pulse of a double pulse decreased during muscle fatigue in both measurement conditions, while the change in M-waves elicited by single pulses in a stimulation burst was not relevant to muscle fatigue in repeated activation with stimulation interval of 1 s. Fatigue index obtained from M-waves elicited by 2nd pulses was suggested to provide good estimation of muscle fatigue during repetitive movements with FES.

功能电刺激(FES)在运动康复中的临床应用研究越来越多。然而,在FES重复性动作生产训练过程中,肌肉疲劳较早出现。虽然m波变量被认为是等长持续电刺激条件下肌肉疲劳的可靠指标,但在间歇刺激条件下,m波的能力需要更多的研究,因为电刺激之间的间隔有助于肌肉激活水平的恢复。本文研究了双脉冲诱发的m波在考虑表面电刺激复健训练的重复性运动中对肌肉疲劳的评价。在重复刺激的两种情况下测量m波:等距条件下膝关节伸直力的产生和膝关节角度控制的动态运动条件下。在两种测量条件下,双脉冲中的第二个脉冲在肌肉疲劳时所激发的m波振幅都有所下降,而在刺激间隔为1 s的重复激活条件下,单脉冲在刺激爆发时所激发的m波变化与肌肉疲劳无关。从第二脉冲引发的m波中获得的疲劳指数被认为可以很好地估计FES重复运动时的肌肉疲劳。
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引用次数: 2
Automated Cough Assessment on a Mobile Platform. 移动平台上的自动咳嗽评估。
Pub Date : 2014-01-01 DOI: 10.1155/2014/951621
Mark Sterling, Hyekyun Rhee, Mark Bocko

The development of an Automated System for Asthma Monitoring (ADAM) is described. This consists of a consumer electronics mobile platform running a custom application. The application acquires an audio signal from an external user-worn microphone connected to the device analog-to-digital converter (microphone input). This signal is processed to determine the presence or absence of cough sounds. Symptom tallies and raw audio waveforms are recorded and made easily accessible for later review by a healthcare provider. The symptom detection algorithm is based upon standard speech recognition and machine learning paradigms and consists of an audio feature extraction step followed by a Hidden Markov Model based Viterbi decoder that has been trained on a large database of audio examples from a variety of subjects. Multiple Hidden Markov Model topologies and orders are studied. Performance of the recognizer is presented in terms of the sensitivity and the rate of false alarm as determined in a cross-validation test.

描述了哮喘监测自动化系统(ADAM)的开发。这包括一个运行自定义应用程序的消费电子移动平台。应用程序从连接到设备模数转换器(麦克风输入)的外部用户佩戴的麦克风获取音频信号。对这个信号进行处理,以确定咳嗽声的存在与否。记录症状计数和原始音频波形,并使其易于访问,供医疗保健提供者稍后查看。症状检测算法基于标准语音识别和机器学习范例,包括音频特征提取步骤,然后是基于隐马尔可夫模型的Viterbi解码器,该解码器已经在来自各种主题的音频示例的大型数据库上进行了训练。研究了多个隐马尔可夫模型的拓扑结构和阶数。识别器的性能是根据在交叉验证测试中确定的灵敏度和误报率来提出的。
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引用次数: 33
Kaczmarz Iterative Projection and Nonuniform Sampling with Complexity Estimates. 具有复杂度估计的Kaczmarz迭代投影和非均匀抽样。
Pub Date : 2014-01-01 Epub Date: 2014-12-14 DOI: 10.1155/2014/908984
Tim Wallace, Ali Sekmen

Kaczmarz's alternating projection method has been widely used for solving mostly over-determined linear system of equations A x = b in various fields of engineering, medical imaging, and computational science. Because of its simple iterative nature with light computation, this method was successfully applied in computerized tomography. Since tomography generates a matrix A with highly coherent rows, randomized Kaczmarz algorithm is expected to provide faster convergence as it picks a row for each iteration at random, based on a certain probability distribution. Since Kaczmarz's method is a subspace projection method, the convergence rate for simple Kaczmarz algorithm was developed in terms of subspace angles. This paper provides analyses of simple and randomized Kaczmarz algorithms and explains the link between them. New versions of randomization are proposed that may speed up convergence in the presence of nonuniform sampling, which is common in tomography applications. It is anticipated that proper understanding of sampling and coherence with respect to convergence and noise can improve future systems to reduce the cumulative radiation exposures to the patient. Quantitative simulations of convergence rates and relative algorithm benchmarks have been produced to illustrate the effects of measurement coherency and algorithm performance, respectively, under various conditions in a real-time kernel.

Kaczmarz交替投影法在工程、医学成像和计算科学的各个领域被广泛用于求解大多为过定的线性方程组A x = b。该方法迭代简单,计算简便,已成功应用于计算机断层扫描。由于层析成像生成的矩阵a具有高度相干的行,因此随机化Kaczmarz算法根据一定的概率分布,每次迭代随机选择一行,从而有望提供更快的收敛速度。由于Kaczmarz的方法是一种子空间投影法,所以我们用子空间角度来表示简单的Kaczmarz算法的收敛速度。本文分析了简单卡兹马尔算法和随机卡兹马尔算法,并解释了它们之间的联系。新版本的随机化提出,可能加快收敛的存在非均匀采样,这是常见的断层扫描应用。预期对采样和相干性与收敛和噪声的正确理解可以改进未来的系统,以减少对患者的累积辐射暴露。对收敛速率和相关算法基准进行了定量模拟,分别说明了在实时内核中不同条件下测量相干性和算法性能的影响。
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引用次数: 1
期刊
Journal of medical engineering
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