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Chemical Modification of CRISPR gRNAs Eliminate type I Interferon Responses in Human Peripheral Blood Mononuclear Cells. 对 CRISPR gRNA 进行化学修饰可消除人类外周血单核细胞中的 I 型干扰素反应。
Pub Date : 2018-01-01 Epub Date: 2018-01-29 DOI: 10.4172/2576-3881.1000121
Mollie S Schubert, Edward Cedrone, Barry Neun, Mark A Behlke, Marina A Dobrovolskaia

Objectives: CRISPR/Cas9 is currently the primary tool used for genome editing in mammalian cells. To cleave and alter genomic DNA, both the Cas9 nuclease and a guide RNA (gRNA) must be present in the nucleus. One preferred method of introducing these reagents is direct transfection of a recombinant Cas9 protein complexed with a synthetic gRNA as a ribonucleoprotein (RNP) complex. It is well established from prior work in RNA interference that synthetic RNAs can induce a type I interferon (IFN) response that can limit the application of such methods both in vitro and in vivo. While the immunological properties of short siRNAs are well understood, little is known about the immune recognition of longer CRISPR gRNAs. The objective of our in vitro study was to investigate how the composition of the gRNA influences its recognition by human immune cells.

Methods: The study was performed in vitro in human peripheral blood mononuclear cells (PBMCs). The PBMCs from healthy donor volunteers were treated with gRNA for 24 h, and the levels of type I IFNs in culture supernatants were measured by a multiplex enzyme-linked immunosorbent chemiluminescent assay. Prior to the analysis in PBMCs, the physicochemical parameters and functionality of all nucleic acid constructs were confirmed by electrospray-ionization mass spectrometry and CRISPR/Cas9 gene editing assessment in HEK293-Cas9 cells, respectively.

Results: We found that unmodified synthetic CRISPR gRNAs triggered a strong IFN response in PBMC cultures in vitro that could be prevented with chemical modification. Likewise, in vitro-transcribed single-guide RNAs (sgRNAs) also triggered a strong IFN response that could only be partially suppressed by phosphatase removal of the 5'-triphosphate group. However, the process by which the gRNA is prepared (i.e., chemically synthesized as a two-part crRNA:tracrRNA complex or in vitro-transcribed as an sgRNA) does not directly influence the immune response to an unmodified gRNA. When experiments were performed in the HEK293 cells, only in vitro-transcribed sgRNA containing 5'-triphosphate induced IFN secretion.

Conclusion: The results of our structure-activity relationship study, therefore, suggest that chemical modifications commonly used to reduce the immunostimulation of traditional RNA therapeutics can also be used as effective tools to eliminate undesirable IFN responses to gRNAs.

目的:CRISPR/Cas9 是目前用于哺乳动物细胞基因组编辑的主要工具。要裂解和改变基因组 DNA,细胞核中必须存在 Cas9 核酸酶和引导 RNA(gRNA)。引入这些试剂的一种首选方法是直接转染重组 Cas9 蛋白与合成的 gRNA 复合物作为核糖核蛋白(RNP)复合物。在以前的 RNA 干扰研究中,合成 RNA 可诱导 I 型干扰素 (IFN) 反应,这一点已得到公认,从而限制了此类方法在体外和体内的应用。虽然人们对短 siRNA 的免疫学特性非常了解,但对较长的 CRISPR gRNA 的免疫识别却知之甚少。我们的体外研究旨在探讨 gRNA 的组成如何影响人类免疫细胞对其的识别:研究在体外的人类外周血单核细胞(PBMCs)中进行。用 gRNA 处理健康捐献志愿者的 PBMCs 24 小时,然后用多重酶联免疫吸附化学发光测定法检测培养上清液中 I 型 IFNs 的水平。在对 PBMCs 进行分析之前,分别通过电喷雾电离质谱法和 HEK293-Cas9 细胞中的 CRISPR/Cas9 基因编辑评估确认了所有核酸构建体的理化参数和功能:结果:我们发现,未经修饰的合成 CRISPR gRNA 在体外的 PBMC 培养物中会引发强烈的 IFN 反应,而通过化学修饰可以防止这种反应。同样,体外转录的单导RNA(sgRNA)也会引发强烈的IFN反应,只有通过磷酸酶去除5'-三磷酸基团才能部分抑制这种反应。然而,gRNA 的制备过程(即化学合成的两部分 crRNA:tracrRNA 复合物或体外转录的 sgRNA)并不会直接影响未修饰 gRNA 的免疫反应。在 HEK293 细胞中进行实验时,只有含有 5'-triphosphate 的体外转录 sgRNA 能诱导 IFN 分泌:因此,我们的结构-活性关系研究结果表明,通常用于减少传统 RNA 治疗药物免疫刺激的化学修饰也可作为有效工具,消除 gRNA 的不良 IFN 反应。
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引用次数: 0
Cytokine and Lipid Mediator Regulation of Group 2 Innate Lymphoid Cells (ILC2s) in Human Allergic Airway Disease. 人变应性气道疾病中2组先天淋巴样细胞(ILC2s)的细胞因子和脂质调节。
Pub Date : 2017-08-01 Epub Date: 2017-08-04 DOI: 10.4172/2576-3881.1000116
Kellen Cavagnero, Taylor A Doherty

The recent discovery of group 2 innate lymphoid cells (ILC2s) has caused a paradigm shift in the understanding of allergic airway disease pathogenesis. Prior to the discovery of ILC2s, Th2 cells were largely thought to be the primary source of type 2 cytokines; however, activated ILC2s have since been shown to contribute significantly, and in some cases, dominantly to type 2 cytokine production. Since the discovery of ILC2s in 2010, many mediators have been shown to regulate their effector functions. Initial studies identified the epithelial derived cytokines IL-25, IL-33, and TSLP as activators of ILC2s, and recent studies have identified many additional cytokine and lipid mediators that are involved in ILC2 regulation. ILC2s and their mediators represent novel therapeutic targets for allergic airway diseases and intensive investigation is underway to better understand ILC2 biology and upstream and downstream pathways that lead to ILC2-driven airway pathology. In this review, we will focus on the cytokine and lipid mediators that regulate ILC2s in human allergic airway disease, as well as highlight newly discovered mediators of mouse ILC2s that may eventually translate to humans.

最近发现的2组先天淋巴样细胞(ILC2s)引起了对过敏性气道疾病发病机制理解的范式转变。在发现ILC2s之前,Th2细胞被认为是2型细胞因子的主要来源;然而,激活的ILC2s已被证明对2型细胞因子的产生有显著的贡献,在某些情况下,主要是。自2010年发现ILC2s以来,许多介质已被证明可以调节其效应功能。最初的研究发现上皮来源的细胞因子IL-25、IL-33和TSLP是ILC2的激活剂,最近的研究发现了许多额外的细胞因子和脂质介质参与ILC2的调节。ILC2s及其介质是过敏性气道疾病的新治疗靶点,为了更好地了解ILC2生物学和导致ILC2驱动气道病理的上游和下游途径,ILC2s及其介质正在进行深入的研究。在这篇综述中,我们将重点关注在人类过敏性气道疾病中调节ILC2s的细胞因子和脂质介质,以及新发现的可能最终转化为人类的小鼠ILC2s介质。
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引用次数: 25
Impacts of Interleukin-17 Neutralization on the Inflammatory Response in a Healing Ligament. 白细胞介素-17中和对愈合韧带炎症反应的影响。
Pub Date : 2017-05-01 Epub Date: 2017-04-06 DOI: 10.4172/2576-3881.1000113
Anna Eb Clements, Connie S Chamberlain, Ellen M Leiferman, William L Murphy, Ray Vanderby

In this study, we sought to improve ligament healing by modulating the inflammatory response after acute injury through the neutralization of Interleukin-17 (IL-17), which we hypothesized would decrease inflammatory cell infiltration and cytokine production. Administration of an Interleukin-17 neutralizing antibody (IL-17 NA) immediately following a rat medial collateral ligament (MCL) transection resulted in alterations in inflammatory cell populations and cytokine expression within the healing ligament, but did not reduce inflammation. Specifically, treatment resulted in a decrease in M2 (anti-inflammatory) macrophages, an increase in T cells, and an increase in the levels of IL-2, IL-6, and IL-12 in the MCL 7 days post injury. IL-17NA treatment, and subsequent immunomodulation, did not result in improved ligament healing, as measured by collagen composition and wound size.

在这项研究中,我们试图通过中和白细胞介素-17 (IL-17)来调节急性损伤后的炎症反应,从而改善韧带愈合,我们假设白细胞介素-17会减少炎症细胞的浸润和细胞因子的产生。在大鼠内侧副韧带(MCL)横断后立即给予白细胞介素-17中和抗体(IL-17 NA)导致愈合韧带内炎症细胞群和细胞因子表达的改变,但没有减轻炎症。具体来说,治疗导致M2(抗炎)巨噬细胞减少,T细胞增加,损伤后7天MCL中IL-2、IL-6和IL-12水平升高。通过胶原成分和伤口大小测量,IL-17NA治疗和随后的免疫调节并没有改善韧带愈合。
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引用次数: 1
Mesenchymal Stem Cell Therapy on Tendon/Ligament Healing. 间充质干细胞治疗肌腱/韧带愈合。
Pub Date : 2017-05-01 Epub Date: 2017-01-07
Connie S Chamberlain, Erin E Saether, Erdem Aktas, Ray Vanderby

A normal healing response after ligament and tendon rupture results in scar formation and an inferior tissue that fails to emulate its original structure, composition, and function. More regenerative healing (closer to the original) can be obtained through early suppression of inflammatory cells and associated cytokines. Examination of the immune mediated response of mesenchymal stem/stromal cells (MSCs) during healing indicates that MSCs reprogram macrophages from a pro-inflammatory M1 phenotype to an anti-inflammatory M2 phenotype. Based on these studies our objective was to treat ligament and tendon injuries with MSCs in order to modulate their inflammatory response. Our initial studies using allogeneic cells demonstrated an in vivo dose dependency of MSCs on ligament healing. Medial collateral ligaments (MCLs) treated with 1 × 106 (low dose) MSCs exhibited less inflammation and a reduced number of M1 macrophages compared to ligaments treated with 4 × 106 (high dose) MSCs. Strength of ligament was also improved with the low dose treatment. We then examined the in vivo effects of MSCs that had been preconditioned to be more anti-inflammatory. Treatment with these preconditioned MSCs was compared with normally processed (unconditioned) MSCs using the rat Achilles tendon and MCL healing models. Pre-conditioned MSCs significantly reduced inflammation by increasing the M2 macrophages and decreasing the M1 macrophages. Most importantly, treatment with pre-conditioned MSCs improved tissue strength to levels comparable to intact tissue. Overall, pre-conditioned MSC-treatment out-performed unconditioned MSCs to improve ligament and tendon healing by stimulating a more robust, paracrine-mediated immunosuppressive response.

韧带和肌腱断裂后的正常愈合反应导致瘢痕形成和不能模仿其原始结构、组成和功能的下组织。通过早期抑制炎症细胞和相关细胞因子,可以获得更多的再生愈合(更接近原始)。对愈合过程中间充质干细胞(MSCs)免疫介导反应的检测表明,MSCs将巨噬细胞从促炎M1表型重编程为抗炎M2表型。基于这些研究,我们的目标是用间充质干细胞治疗韧带和肌腱损伤,以调节其炎症反应。我们使用同种异体细胞的初步研究表明,MSCs对韧带愈合有体内剂量依赖性。与用4 × 106(高剂量)MSCs处理的韧带相比,用1 × 106(低剂量)MSCs处理的内侧副韧带(MCLs)表现出更少的炎症和M1巨噬细胞数量减少。低剂量治疗也能改善韧带强度。然后,我们检查了已被预处理为更抗炎的MSCs的体内效应。利用大鼠跟腱和MCL愈合模型,将这些预处理的MSCs与正常处理的(未经预处理的)MSCs进行比较。预处理MSCs通过增加M2巨噬细胞和减少M1巨噬细胞显著减轻炎症反应。最重要的是,预处理MSCs将组织强度提高到与完整组织相当的水平。总体而言,预处理MSCs治疗通过刺激更强大的旁分泌介导的免疫抑制反应,在改善韧带和肌腱愈合方面优于未经预处理的MSCs。
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引用次数: 0
Mesenchymal Stem Cell Therapy on Tendon/Ligament Healing. 间充质干细胞治疗肌腱/韧带愈合。
Pub Date : 2017-01-07 DOI: 10.4172/2576-3881.1000112
C. Chamberlain, Erin E. Saether, E. Aktaş, R. Vanderby
A normal healing response after ligament and tendon rupture results in scar formation and an inferior tissue that fails to emulate its original structure, composition, and function. More regenerative healing (closer to the original) can be obtained through early suppression of inflammatory cells and associated cytokines. Examination of the immune mediated response of mesenchymal stem/stromal cells (MSCs) during healing indicates that MSCs reprogram macrophages from a pro-inflammatory M1 phenotype to an anti-inflammatory M2 phenotype. Based on these studies our objective was to treat ligament and tendon injuries with MSCs in order to modulate their inflammatory response. Our initial studies using allogeneic cells demonstrated an in vivo dose dependency of MSCs on ligament healing. Medial collateral ligaments (MCLs) treated with 1 × 106 (low dose) MSCs exhibited less inflammation and a reduced number of M1 macrophages compared to ligaments treated with 4 × 106 (high dose) MSCs. Strength of ligament was also improved with the low dose treatment. We then examined the in vivo effects of MSCs that had been preconditioned to be more anti-inflammatory. Treatment with these preconditioned MSCs was compared with normally processed (unconditioned) MSCs using the rat Achilles tendon and MCL healing models. Pre-conditioned MSCs significantly reduced inflammation by increasing the M2 macrophages and decreasing the M1 macrophages. Most importantly, treatment with pre-conditioned MSCs improved tissue strength to levels comparable to intact tissue. Overall, pre-conditioned MSC-treatment out-performed unconditioned MSCs to improve ligament and tendon healing by stimulating a more robust, paracrine-mediated immunosuppressive response.
韧带和肌腱断裂后的正常愈合反应导致瘢痕形成和不能模仿其原始结构、组成和功能的下组织。通过早期抑制炎症细胞和相关细胞因子,可以获得更多的再生愈合(更接近原始)。对愈合过程中间充质干细胞(MSCs)免疫介导反应的检测表明,MSCs将巨噬细胞从促炎M1表型重编程为抗炎M2表型。基于这些研究,我们的目标是用间充质干细胞治疗韧带和肌腱损伤,以调节其炎症反应。我们使用同种异体细胞的初步研究表明,MSCs对韧带愈合有体内剂量依赖性。与用4 × 106(高剂量)MSCs处理的韧带相比,用1 × 106(低剂量)MSCs处理的内侧副韧带(MCLs)表现出更少的炎症和M1巨噬细胞数量减少。低剂量治疗也能改善韧带强度。然后,我们检查了已被预处理为更抗炎的MSCs的体内效应。利用大鼠跟腱和MCL愈合模型,将这些预处理的MSCs与正常处理的(未经预处理的)MSCs进行比较。预处理MSCs通过增加M2巨噬细胞和减少M1巨噬细胞显著减轻炎症反应。最重要的是,预处理MSCs将组织强度提高到与完整组织相当的水平。总体而言,预处理MSCs治疗通过刺激更强大的旁分泌介导的免疫抑制反应,在改善韧带和肌腱愈合方面优于未经预处理的MSCs。
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引用次数: 34
期刊
Journal of cytokine biology
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