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Dietary modulation of the gut–immune–brain axis: nutritional immunoepigenomics for immune regulation in autoimmunity, cancer, and infection 肠道-免疫-脑轴的饮食调节:自身免疫、癌症和感染免疫调节的营养免疫表观基因组学
Pub Date : 2026-01-20 DOI: 10.1016/j.clicom.2026.01.004
Arpita Mukherjee
The gut microbiota is emerging as a master regulator of immune homeostasis across infections, cancer, and neuroinflammatory disorders. Dietary inputs dynamically shape microbial ecosystems and induce durable epigenetic reprogramming of host immunity a convergence now defined as nutritional immunoepigenomics. This review posits that specific nutrients (e.g., soluble fibers, omega-3 fatty acids, polyphenols) promote anti-inflammatory microbial profiles that generate metabolites such as short-chain fatty acids and tryptophan catabolites. These act as epigenetic modifiers regulating histone marks (H3K27ac, H3K9me3) and DNA methylation in Tregs, Th17 cells, dendritic cells, and microglia thus modulating immune tolerance and neuroimmune surveillance. I further explore how ketogenic diets and intermittent fasting influence microbiota epigenome signaling. Integrating findings from preclinical and human studies, and highlight translational advances in spectroscopy and multi-omics for non-invasive monitoring of diet-induced immunoepigenetic states. This review advocates precision dietary strategies as programmable modulators of the gut–immune–brain axis to enhance immunological resilience and therapeutic potential.
肠道微生物群正在成为感染、癌症和神经炎性疾病中免疫稳态的主要调节者。饮食输入动态塑造微生物生态系统并诱导宿主免疫的持久表观遗传重编程,这种趋同现在被定义为营养免疫表观基因组学。这篇综述假设特定的营养素(如可溶性纤维、omega-3脂肪酸、多酚)促进抗炎微生物谱,产生代谢物,如短链脂肪酸和色氨酸分解代谢物。它们作为表观遗传修饰因子调节treg、Th17细胞、树突状细胞和小胶质细胞中的组蛋白标记(H3K27ac、H3K9me3)和DNA甲基化,从而调节免疫耐受和神经免疫监视。我进一步探讨生酮饮食和间歇性禁食如何影响微生物群表观基因组信号。整合临床前和人体研究的发现,并强调光谱和多组学在无创监测饮食诱导的免疫表观遗传状态方面的转化进展。这篇综述提倡精确的饮食策略作为肠道-免疫-脑轴的可编程调节剂,以增强免疫恢复能力和治疗潜力。
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引用次数: 0
Trends and contemporary epidemiology of mortality with primary immunodeficiency diseases in the United States, 2015–2022 2015-2022年美国原发性免疫缺陷疾病死亡率趋势和当代流行病学
Pub Date : 2026-01-17 DOI: 10.1016/j.clicom.2026.01.002
Ernestina Bioh Hansen-Sackey , Fredrick Dapaah-Siakwan

Background

There is paucity of data on recent trends of population-level deaths with Primary Immunodeficiency Diseases (PIDD).

Objective

To examine the population-based temporal trends in deaths with PIDD in the United States from 2015 to 2022.

Methods

We performed a retrospective, serial cross-sectional analysis of national death certificate data from 2015 through 2022. We evaluated the changes in the PIDD age-adjusted mortality rate per 1000,000 (AAMR), overall, then stratified by age, gender, and race/ethnicity.

Results

The overall AAMR increased significantly from 2.5 to 3.5 (P < 0.01). The AAMR rose significantly from 2.5 in the pre-COVID-19 era (2015–2019) to 3.2 in the COVID-19 era (2020–2022) [P = 0.03]. A similar trend was seen in several subgroups especially those aged ≥65 years.

Conclusion

The overall PIDD AAMR increased during the study period, especially in those aged ≥65 years. This data can enhance PIDD awareness and reduce mortality, especially in older patients.
关于原发性免疫缺陷疾病(PIDD)人群死亡的最新趋势数据缺乏。目的探讨2015年至2022年美国PIDD死亡的人口时间趋势。方法对2015年至2022年全国死亡证明数据进行回顾性、连续横断面分析。我们总体评估了PIDD年龄调整死亡率(AAMR)的变化,然后按年龄、性别和种族/民族分层。结果总AAMR由2.5升高至3.5,差异有统计学意义(P < 0.01)。AAMR从新冠肺炎前(2015-2019年)的2.5显著上升至新冠肺炎时代(2020-2022年)的3.2 [P = 0.03]。在几个亚组中也有类似的趋势,尤其是年龄≥65岁的人群。结论在研究期间,PIDD的总体AAMR升高,尤其是≥65岁的患者。这些数据可以提高对PIDD的认识,降低死亡率,尤其是老年患者。
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引用次数: 0
Senescence associated osteoarthritis: Emerging therapeutics and future directions 衰老相关骨关节炎:新兴疗法和未来方向
Pub Date : 2026-01-17 DOI: 10.1016/j.clicom.2026.01.003
Sheen Razdan , Anush Tomar , Sweta Bawari
Osteoarthritis is a degenerative condition that primarily affects the joints. This condition is often marked by the slow degradation of cartilage as well as changes in the subchondral bone. One of the key markers of osteoarthritis is chronic inflammation. Aging is a primary risk factor for osteoarthritis, as it leads to cellular senescence, which in turn causes degeneration of the bone and low-grade inflammation. Osteoarthritis is a major cause of disability, particularly affecting elderly people. With the increasing global population of elderly people, this condition is becoming a significant socioeconomic burden. Despite the increasing disease burden, there are no approved therapies to stop or reverse the progression of osteoarthritis. The current approved treatments only provide symptomatic care, which leads to the initiation of research in this field to develop novel therapies targeting its underlying mechanisms.
Emerging therapeutic strategies include senolytics and senomorphics, which aim to eliminate senescent cells or modulate their inflammatory secretory profiles. Senolytic agents such as Dasatinib can selectively induce apoptosis in senescent cells, showing efficacy in preclinical osteoarthritis models. Senomorphic agents, including Ruxolitinib, can mitigate inflammation by modulating cellular pathways like JAK-STAT, mTOR, AMPK, and Wnt/β-catenin signalling. Additionally, anti-inflammatory cytokine therapies targeting IL-17, IL-1, and IL-6 have demonstrated potential in preclinical and clinical studies by reducing osteoarthritis-associated inflammation and cartilage degradation.
This review focuses on the various cellular mechanisms through which bone tissues are degenerated due to cellular senescence, which highlights the key pathways or markers to be targeted to find novel therapeutics targeting cellular senescence. It also mentions some of the novel therapeutics of chemical, phytoconstituents, and biologics, which have shown positive results in various studies, but need further validation, and this can open a new horizon for research in this field.
骨关节炎是一种主要影响关节的退行性疾病。这种情况通常以软骨的缓慢退化以及软骨下骨的变化为特征。骨关节炎的关键标志之一是慢性炎症。衰老是骨关节炎的主要危险因素,因为它会导致细胞衰老,进而导致骨骼退化和轻度炎症。骨关节炎是导致残疾的主要原因,尤其影响老年人。随着全球老年人口的增加,这种情况正在成为一个重大的社会经济负担。尽管疾病负担不断增加,但没有批准的治疗方法来阻止或逆转骨关节炎的进展。目前批准的治疗方法仅提供对症治疗,这导致该领域的研究开始针对其潜在机制开发新的治疗方法。新兴的治疗策略包括抗衰老药物和senomorphics,其目的是消除衰老细胞或调节其炎症分泌谱。达沙替尼等抗衰老药物可选择性诱导衰老细胞凋亡,在临床前骨关节炎模型中显示出疗效。类药物,包括Ruxolitinib,可以通过调节细胞通路如JAK-STAT、mTOR、AMPK和Wnt/β-catenin信号传导来减轻炎症。此外,针对IL-17、IL-1和IL-6的抗炎细胞因子疗法已经在临床前和临床研究中证明了其减少骨关节炎相关炎症和软骨降解的潜力。本文综述了细胞衰老导致骨组织退化的各种细胞机制,重点介绍了寻找针对细胞衰老的新疗法的关键途径或标志物。同时也提到了一些新的化学、植物成分和生物制剂的治疗方法,这些方法在各种研究中已经显示出积极的结果,但还需要进一步的验证,这可以为该领域的研究开辟新的视野。
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引用次数: 0
Disease-specific clustering is seen among first-degree relatives in autoimmune rheumatic diseases: A cross-sectional, multi-centre study 疾病特异性聚类在自身免疫性风湿病的一级亲属中可见:一项横断面,多中心研究
Pub Date : 2026-01-09 DOI: 10.1016/j.clicom.2026.01.001
S Chandrashekara , Padmanabha Shenoy , Uma Kumar , Sapan Pandya , Alakendu Ghosh , Rajkiran Dudam , Arghya Chattopadhyay , Apurva Khare , Rudra Prosad Goswami , Banwari Sharma

Objective

This study aimed to assess the prevalence and pattern of familial autoimmunity and comorbidities among patients with rheumatoid arthritis (RA), systemic lupus erythematosus (SLE), and systemic sclerosis (SSc).

Methods

This multicentre, cross-sectional study utilized data from the Indian Rheumatology Association database and included patients diagnosed with RA, SLE, or SSc according to ACR/EULAR criteria. Family histories of autoimmune diseases and comorbidities (diabetes, hypertension, and cardiovascular disease) were recorded up to third-degree relatives. Data were analyzed using descriptive statistics, Pearson’s chi-square, and Fisher-Freeman-Halton exact tests.

Results

Among 4384 RA, 819 SLE, and 180 SSc patients, valid family history data were available for 3638, 489, and 135 cases, respectively. A positive family history of autoimmune disease was observed in 19.6% of RA, 11.4% of SLE, and 10% of SSc patients (P < 0.001). Familial RA was most common among RA patients (13.3%), whereas SLE-like disease was more frequent among relatives of SLE patients (2.6%). First-degree relatives were predominantly affected (RA 91%, SLE 89.3%, SSc 83.3%). Diabetes (16.7–22.2%) and hypertension (9.5–13.9%) were the most prevalent familial comorbidities, with diabetes showing higher aggregation in SSc families (P = 0.002).

Conclusion

Familial autoimmunity is common across major AIRDs, showing strong first-degree aggregation and disease-specific clustering. Distinct familial patterns are observed for autoimmune and metabolic comorbidities. RA demonstrates the strongest immediate familial clustering, whereas SLE displays a broader generational spread.
目的本研究旨在评估类风湿关节炎(RA)、系统性红斑狼疮(SLE)和系统性硬化症(SSc)患者家族性自身免疫和合并症的患病率和模式。方法:这项多中心、横断面研究利用了来自印度风湿病协会数据库的数据,纳入了根据ACR/EULAR标准诊断为RA、SLE或SSc的患者。自身免疫性疾病和合并症(糖尿病、高血压和心血管疾病)的家族史被记录到第三度亲属。使用描述性统计、Pearson卡方和Fisher-Freeman-Halton精确检验对数据进行分析。结果在4384例RA、819例SLE和180例SSc患者中,分别有3638例、489例和135例有效家族史资料。19.6%的RA、11.4%的SLE和10%的SSc患者有自身免疫性疾病家族史(P < 0.001)。家族性RA在RA患者中最为常见(13.3%),而SLE患者亲属中SLE样疾病更为常见(2.6%)。一级亲属主要受影响(RA 91%, SLE 89.3%, SSc 83.3%)。糖尿病(16.7-22.2%)和高血压(9.5-13.9%)是最常见的家族合并症,其中糖尿病在SSc家族中聚集性更高(P = 0.002)。结论家族性自身免疫在主要AIRDs中普遍存在,具有较强的一级聚集性和疾病特异性聚集性。不同的家族模式观察到自身免疫和代谢合并症。RA表现出最强的直系家族聚集性,而SLE表现出更广泛的代际传播。
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引用次数: 0
Systems immunology meets clinical translation: Multi-omic approaches to predict therapy response in cancer and autoimmune disease 系统免疫学符合临床翻译:多组学方法预测癌症和自身免疫性疾病的治疗反应
Pub Date : 2025-12-23 DOI: 10.1016/j.clicom.2025.12.002
Praveen Kumar Chandra Sekar, Ramakrishnan Veerabathiran
The immune system is governed by complex, interconnected molecular and cellular networks that shape disease risk and treatment outcome. Conventional biomarkers in cancer and autoimmune disease often rely on single parameters and fail to capture immune heterogeneity, resulting in variable therapeutic responses. Systems immunology integrates genomics, transcriptomics, epigenomics, proteomics, metabolomics, and microbiome profiling to generate holistic models of immune function. This review examines how multi-omic integration improves the prediction of therapy response across solid and hematologic malignancies and autoimmune disorders, including rheumatoid arthritis, systemic lupus erythematosus, multiple sclerosis, and inflammatory bowel disease. Advances in machine learning, network modeling, and spatial biology are discussed as critical enablers of immune stratification and biomarker discovery. Although integrated approaches outperform single-omics predictors, challenges remain in clinical validation, interpretability, and cost-effectiveness. We propose a translational framework in which targeted multi-omic panels and computational modeling guide personalized immunotherapy, shifting immune-based treatment from empirical intervention toward predictive, systems-driven precision medicine.
免疫系统是由复杂的、相互关联的分子和细胞网络控制的,这些网络决定了疾病的风险和治疗结果。癌症和自身免疫性疾病的传统生物标志物通常依赖于单一参数,无法捕获免疫异质性,导致治疗反应多变。系统免疫学整合了基因组学、转录组学、表观基因组学、蛋白质组学、代谢组学和微生物组分析,以产生免疫功能的整体模型。这篇综述探讨了多组学整合如何改善对实体和血液恶性肿瘤以及自身免疫性疾病(包括类风湿关节炎、系统性红斑狼疮、多发性硬化症和炎症性肠病)治疗反应的预测。机器学习、网络建模和空间生物学的进步是免疫分层和生物标志物发现的关键推动者。尽管综合方法优于单组学预测,但在临床验证、可解释性和成本效益方面仍存在挑战。我们提出了一个翻译框架,其中有针对性的多组学小组和计算建模指导个性化免疫治疗,将基于免疫的治疗从经验干预转向预测性,系统驱动的精准医学。
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引用次数: 0
The impact of diet on gut microbiome composition: Implications for immune-mediated diseases 饮食对肠道微生物组成的影响:对免疫介导疾病的影响
Pub Date : 2025-12-11 DOI: 10.1016/j.clicom.2025.12.001
Debora Rondinella , Ernesto Margarita , Pauline Celine Raoul , Francesca Sofia Galli , Andrea Severino , Serena Porcari , Maria Cristina Mele , Antonio Gasbarrini , Giovanni Cammarota , Emanuele Rinninella , Gianluca Ianiro
Diet is a key modulator of the gut microbiome, which in turn regulates immune function and inflammation. Western dietary patterns, characterized by high intake of fat, sugar, and ultra-processed foods, are associated with gut dysbiosis, increased intestinal permeability, reduced short-chain fatty acid (SCFA) production, and heightened systemic inflammation. In contrast, Mediterranean, high-fiber, plant-based, and fermented-food diets promote microbial diversity, enhance SCFA synthesis, improve gut barrier integrity, and support immune tolerance by modulating regulatory T cell activity. These dietary patterns have demonstrated potential to reduce inflammation and improve outcomes in immune-mediated diseases (IMDs). Current evidence highlights the importance of nutrition strategies to restore healthy microbiome balance and mitigate inflammation, though further clinical trials are needed to confirm efficacy and guide clinical application. This review aims to provide evidence of the negative and positive diets along with the therapeutic potentials within the context of IMDs and emphasizes the need for individualized nutrition.
饮食是肠道微生物群的关键调节剂,反过来又调节免疫功能和炎症。西方饮食模式的特点是大量摄入脂肪、糖和超加工食品,这与肠道生态失调、肠道通透性增加、短链脂肪酸(SCFA)产生减少和全身性炎症加剧有关。相比之下,地中海、高纤维、植物性和发酵食品饮食可促进微生物多样性,增强短链脂肪酸合成,改善肠道屏障完整性,并通过调节调节性T细胞活性来支持免疫耐受。这些饮食模式已被证明具有减少炎症和改善免疫介导性疾病(IMDs)预后的潜力。目前的证据强调了营养策略在恢复健康微生物群平衡和减轻炎症方面的重要性,尽管需要进一步的临床试验来证实其功效并指导临床应用。本综述旨在提供负面和正面饮食的证据,以及在imd背景下的治疗潜力,并强调个性化营养的必要性。
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引用次数: 0
The immunological nexus between inflammatory bowel disease and colorectal cancer: A molecular perspective 炎症性肠病和结直肠癌之间的免疫学联系:分子视角
Pub Date : 2025-12-01 DOI: 10.1016/j.clicom.2025.11.004
Betty Rachma , Rio Putra Pamungkas , Debi Yulia Sandra , Henry Sutanto , Deasy Fetarayani
Inflammatory bowel disease (IBD) and colorectal cancer (CRC) are intimately linked through complex immunological mechanisms that drive chronic inflammation and tumorigenesis. Persistent immune activation in IBD fosters a microenvironment conducive to malignant transformation, yet the precise molecular pathways underpinning this relationship remain an area of active investigation. Dysregulated interactions between innate and adaptive immune responses, aberrant cytokine signaling, and immune-modulating microbial factors contribute to the pathogenesis of both diseases. Advances in molecular immunology have revealed critical checkpoints and signaling cascades that may serve as therapeutic targets, offering new strategies for intervention. This review synthesizes current knowledge on the immunological landscape bridging these two conditions, emphasizing translational implications and future research directions. By delineating key molecular pathways and immune dynamics, this work aims to provide a comprehensive perspective on the interplay between chronic inflammation and colorectal tumorigenesis, fostering a deeper understanding of potential diagnostic and therapeutic advancements.
炎症性肠病(IBD)和结直肠癌(CRC)通过驱动慢性炎症和肿瘤发生的复杂免疫机制密切相关。IBD中持续的免疫激活促进了一个有利于恶性转化的微环境,然而支撑这种关系的精确分子途径仍然是一个积极研究的领域。先天免疫和适应性免疫反应之间的相互作用失调,细胞因子信号传导异常,免疫调节微生物因子有助于这两种疾病的发病机制。分子免疫学的进展揭示了可能作为治疗靶点的关键检查点和信号级联,为干预提供了新的策略。这篇综述综合了目前的免疫学景观知识,将这两种情况联系起来,强调了翻译意义和未来的研究方向。通过描述关键的分子通路和免疫动力学,这项工作旨在为慢性炎症和结直肠肿瘤发生之间的相互作用提供一个全面的视角,促进对潜在诊断和治疗进展的更深入理解。
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引用次数: 0
Immunological interventions in bacterial infections: From mechanisms to clinical applications 细菌感染的免疫干预:从机制到临床应用
Pub Date : 2025-11-11 DOI: 10.1016/j.clicom.2025.11.003
Sithi Sarkar, Sailee Chowdhury, Koyel Kar, Priyanka Chakraborty, Anirban Das
The rise of multiantibiotic-resistant bacteria poses a major challenge to infection management, as some bacteria survive even antibiotic therapy by evading immune responses. With decreasing treatment options due to increased antibiotic resistance, there is an urgent need for alternative or adjunctive therapies. Immunotherapy, widely used in cancer treatment for its ability to overcome immunosuppression, is emerging as a promising approach for bacterial infections, including persistent and drug-resistant diseases like tuberculosis. Strategies such as immune checkpoint inhibition, cytokine modulation, and cellular therapies are demonstrating potential in preclinical studies. These approaches aim to restore or enhance host immunity against bacterial pathogens. Given the growing threat of resistance, advancing immunotherapy into clinical use requires rigorous trials to validate safety and efficacy. This review discusses the therapeutic promise of immunotherapies against bacterial infections, highlights recent advancements, and outlines current and future directions in the field.
多重抗生素耐药细菌的增加对感染管理提出了重大挑战,因为一些细菌通过逃避免疫反应而在抗生素治疗中存活下来。由于抗生素耐药性增加,治疗方案减少,迫切需要替代或辅助治疗。免疫疗法因其克服免疫抑制的能力而广泛应用于癌症治疗,目前正成为治疗细菌感染(包括结核病等持续性和耐药疾病)的一种有希望的方法。免疫检查点抑制、细胞因子调节和细胞治疗等策略在临床前研究中显示出潜力。这些方法旨在恢复或增强宿主对细菌病原体的免疫力。鉴于耐药性的威胁日益增加,将免疫疗法推进到临床应用需要严格的试验来验证安全性和有效性。这篇综述讨论了免疫疗法对细菌感染的治疗前景,强调了最近的进展,并概述了该领域当前和未来的方向。
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引用次数: 0
Chronic mucocutaneous candidiasis due to TRAF3IP2 mutation in three Saudi patients – A case series and literature review 3例沙特患者TRAF3IP2突变引起的慢性粘膜皮肤念珠菌病-病例系列和文献综述
Pub Date : 2025-11-11 DOI: 10.1016/j.clicom.2025.11.002
Abduarahman Almutairi , Amal Alzaby , Mohammed Albayedh , Abdulrahman N. AlJaber , Muteb Altowairqi
ACT1 deficiency is extremely rare inborn error of immunity with only eleven cases reported in the literature. We reported a case series of three Saudi patients with chronic mucocutaneous candidiasis (CMC) due to mutations in TRAF3IP2, a gene encoding the adaptor ACT1. Two of them were siblings who presented with recurrent oral thrush, hair folliculitis, and short stature, and were found to have a frameshift TRAF3IP2 mutation. The other patient had recurrent oral thrush complicated with candida esophagitis. He also demonstrated characteristics indicative of attention-deficit/hyperactivity disorder (ADHD). He harbored a nonsense TRAF3IP2 mutation. Short stature and ADHD are clinical manifestations not previously linked to ACT1 deficiency, suggesting the potential for more broader systemic involvement. In this manuscript, we delineate additional cases that expand the clinical and genetic landscape of TRAF3IP2-associated disorders.
ACT1缺乏症是一种极为罕见的先天性免疫缺陷,文献报道仅有11例。我们报道了三例沙特阿拉伯患者的慢性粘膜皮肤念珠菌病(CMC),这是由于TRAF3IP2基因突变引起的,TRAF3IP2是一种编码适配器ACT1的基因。其中2例为兄弟姐妹,表现为复发性鹅口疮、毛囊炎和身材矮小,并发现有移码TRAF3IP2突变。1例复发性鹅口疮并发念珠菌性食管炎。他还表现出了注意缺陷/多动障碍(ADHD)的特征。他携带了无意义的TRAF3IP2突变。身材矮小和注意力缺陷多动障碍的临床表现以前与ACT1缺乏没有联系,这表明可能有更广泛的全身性影响。在这篇文章中,我们描述了额外的病例,扩大了traf3ip2相关疾病的临床和遗传景观。
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引用次数: 0
Medicinal mushroom-derived compounds for managing neuro-gastrointestinal and physical symptoms in cancer patients: Mechanisms, clinical evidence, and future directions 药用蘑菇衍生化合物用于治疗癌症患者的神经胃肠道和身体症状:机制、临床证据和未来方向
Pub Date : 2025-11-07 DOI: 10.1016/j.clicom.2025.11.001
Jainu Ajit , Rebeka Ambrožič
Cancer patients experience a significant symptom burden that affects their quality of life. These include gastrointestinal, neurological, and physical side effects, which worsen fatigue and quality of life during conventional treatments like radiotherapy, chemotherapy, and immunotherapy. Consequently, there is increasing interest in integrative approaches to complement standard treatments. Among these, medicinal mushrooms are gaining popularity because of their immunomodulatory properties and potential to alleviate common cancer- and treatment-related symptoms. We thoroughly review existing reports on the benefits of medicinal mushrooms in cancer care and discuss how future clinical trials can apply more rigorous methods to quantitatively assess their advantages.
癌症患者经历了严重的症状负担,影响了他们的生活质量。这些副作用包括胃肠道、神经系统和身体的副作用,在放疗、化疗和免疫治疗等常规治疗期间,这些副作用会加重疲劳和生活质量。因此,人们对综合方法补充标准治疗的兴趣越来越大。其中,药用蘑菇因其免疫调节特性和缓解常见癌症和治疗相关症状的潜力而越来越受欢迎。我们全面回顾了关于药用蘑菇在癌症治疗中的益处的现有报告,并讨论了未来的临床试验如何应用更严格的方法来定量评估其优势。
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引用次数: 0
期刊
Clinical Immunology Communications
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