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Genetic variability among pig populations in Imo State, Nigeria using random amplified polymorphic DNA-PCR 利用随机扩增多态DNA-PCR分析尼日利亚伊莫州猪群的遗传变异
Pub Date : 2014-07-01 DOI: 10.1016/j.nigjg.2015.09.004
V.M.O. Okoro , B.I. Kemka , E.H. Okoh , R.C. Osuchukwu , O. Obiozor , O. Kadurumba , U.E. Ogundu , S.N. Ibe

Random amplified Polymorphic DNA polymerase chain reaction (RAPD DNA-PCR) was employed to access the genetic variability and phylogenetic relationship among pig populations in Imo State. Genomic DNA from 50 pigs comprising of at least 10 pigs per geopolitical zone of Imo state were extracted and two highly polymorphic primers utilized to estimate variability, phylogenetic relationship among the pigs and their genetic diversity. The genetic distance and genetic identity estimated showed that genetic distances (D) calculated ranged between 0.0300 (Songhai vs FUTO) and 0.1497 (Mbaise vs Awo-Idemili), while the genetic identity (I) calculated ranged between 0.8610 (Mbaise vs Awo-Idemili) and 0.9704 (Songhai vs FUTO). Similarity was observed between Songhai, Mbaise and FUTO populations, while Mbano and Awo–idemili exhibited dissimilarity. The phylogenetic tree showed that Songhai, FUTO and Mbaise populations are more closely related while Mbano and Awo-idemili are more genetically distant. The standard genetic diversity (h*) of total population ranged from 0.0001 to 0.4998 with an average of 0.3208, while Shannon's information index (I*) ranged from 0.0001 to 0.6929 with a mean of 0.4762. This study shows that genetic diversity of the RAPD DNA polymorphs amongst pig populations in Imo State is low while the genetic relationship between the different populations varies from population to population.

采用随机扩增多态性DNA聚合酶链反应(RAPD DNA- pcr)分析了伊莫州猪群的遗传变异和系统发育关系。提取了50头猪的基因组DNA,其中每个地理区域至少有10头猪,并利用两个高度多态性引物来估计猪之间的变异性、系统发育关系及其遗传多样性。遗传距离和遗传同源性估算结果表明,计算得到的遗传距离(D)在0.0300 ~ 0.1497之间(松海vs富托),遗传同源性(I)在0.8610 ~ 0.9704之间(松海vs富托)。Songhai、Mbaise和FUTO种群间存在相似性,而Mbano和Awo-idemili种群间存在差异。系统发育树分析表明,松海、FUTO和Mbaise群体亲缘关系较近,而Mbano和Awo-idemili群体亲缘关系较远。总体标准遗传多样性(h*)范围为0.0001 ~ 0.4998,平均为0.3208;Shannon信息指数(I*)范围为0.0001 ~ 0.6929,平均为0.4762。该研究表明,伊莫州猪群体之间RAPD DNA多态性的遗传多样性较低,而不同群体之间的遗传关系因群体而异。
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引用次数: 1
Genetic analysis of some economic traits in a composite breed of domestic rabbits reared in a tropical environment 热带环境下家兔复合品种若干经济性状的遗传分析
Pub Date : 2014-07-01 DOI: 10.1016/J.NIGJG.2015.09.002
U. G. Sorhue, F. Mmereole, E. Irikefe-ekeke, S. U. Nwakwo
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引用次数: 7
Genetic variation, heritability, genetic advance and agronomic character association of yellow elite inbred lines of maize (Zea mays L.) 玉米黄色优良自交系的遗传变异、遗传力、遗传进阶及农艺性状关联
Pub Date : 2014-07-01 DOI: 10.1016/j.nigjg.2015.06.005
D.J. Ogunniyan, S.A. Olakojo

Fifteen elite yellow maize inbred lines were evaluated in a randomized complete block design experiment with three replicates in 2014. Data were collected on days to anthesis and silking, anthesis-silking interval, plant and ear heights, number of ears per plant, leaf area, ear weight and grain yield. Mean values were used to determine characters' phenotypic and genotypic variances, phenotypic, genotypic and environmental coefficients of variation. Broad sense heritability and genetic advance percentage of mean were estimated for each trait. Significant variation existed in all the characters. The coefficients of variation were low except for ear weight and grain yield that were relatively higher. The anthesis-silking interval was highest in lines TZEI 124 and TZEI 16, but least in lines BD74-222, TZEI 11 and TZEI 13. Line BD74-222 had the height plant height and BD74-165 had the least. Line TZEI 124 produced highest maize grain yield whereas line TZEI 146 had the least. Coefficients of variation of phenotype and genotype were low for all the traits except number of ear per plant, ear and grain yield. The characters were less influenced by the environment thus the traits can be used for selection. Heritability was greater than 80% for all characters studied whereas expected genetic advance ranged from low (8.91) in days to silking to high (72.03) in number of ear per plant. Days to anthesis and silking, plant height and number of leaf per plant were positively correlated. Grain yield was positively correlated with ASI, plant and ear heights, number of leaf per plant and leaf area. High heritability and high genetic advance for ASI indicated the presence of additive genes in the trait and suggested reliable maize improvement through selection of the traits. In this study moderate genetic advance was associated with high heritability.

2014年,采用3个重复的随机完全区组设计试验,对15个优质黄玉米自交系进行评价。收集花期吐丝天数、花期吐丝间隔、株高和穗高、单株穗数、叶面积、穗重和籽粒产量等数据。采用平均值确定性状的表型和基因型变异,表型变异系数、基因型变异系数和环境变异系数。估计了各性状的广义遗传力和平均遗传超前率。各性状均存在显著变异。除穗重和籽粒产量较高外,其余变异系数均较低。花丝间隔以TZEI 124和TZEI 16最高,BD74-222、TZEI 11和TZEI 13最低。品系BD74-222株高最高,BD74-165株高最低。品种TZEI 124产量最高,品种TZEI 146产量最低。除单株穗数、穗数和籽粒产量外,其余性状的表型和基因型变异系数均较低。这些性状受环境影响较小,可作为选育性状。所有性状的遗传率均大于80%,而预期遗传进步从低(8.91)的日丝到高(72.03)的穗数不等。开花吐丝天数与株高、单株叶数呈正相关。籽粒产量与ASI、株高和穗高、单株叶数和叶面积呈正相关。ASI的高遗传率和高遗传超前性表明该性状存在加性基因,提示通过性状选择进行玉米改良是可靠的。在这项研究中,适度的遗传进展与高遗传力相关。
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引用次数: 101
Assessment of variability of finger millet (Eleusine coracana (L) Gaertn) landraces germplasm in Northern Nigeria 尼日利亚北部指粟(Eleusine coracana (L) Gaertn)地方品种种质变异的评价
Pub Date : 2014-07-01 DOI: 10.1016/j.nigjg.2015.09.005
I.D. Umar , E.H. Kwon-Ndung

Germplasm identification and characterization is an important link between conservation and utilization of plant genetic resources. The present study was conducted to characterize the morphological diversity of 10 germplasm accessions of Finger millet (Eleusine coracana (L) Gaertn) collected from diverse locations spread across the geographic Northern Nigeria during the 2008, 2009 and 2010 cropping seasons. The seeds of the accessions were planted in a randomized complete block design (RCBD) with three replications in each of two locations-Keffi and Gwagwalada, during the three cropping seasons. The field studies for the three seasons in the two locations followed uniform agricultural practices. Field data was collected on morphological traits such as plant height, leaf length, leaf diameter, finger length, finger width, number of fingers and 1000 seed weight were recorded in accordance with standard finger millet descriptors. The results obtained, showed that plant height in accession Ex-Kwi was significantly different from all the other nine accessions while the highest leaf length which was recorded in Ex-Riyom was significantly different (p < 0.05) from only accession Ex-Dantse. Similarly, significant variations were observed in the number and length of fingers, and 1000 seed weight across all the accessions tested, over the three cropping seasons in the multilocational trial. Evaluation of phenotypic and genotypic characters of the different accessions revealed that the genotypes expressed significant genetic diversity for plant height, 1000 seed weight, leaf length and number of tillers than all the other traits assessed at p < 0.05 level of significance. These results tend to suggest a high variability existing among the selected morphological traits. Specifically, 87% of the variations were explained by the ANOVA model leaving only 13% unexplained. The cluster analysis based on morphological traits revealed six major distinct groups with one landrace forming independent cluster for the pooled analysis for the three years.

种质鉴定与鉴定是植物遗传资源保护与利用的重要环节。本研究对2008年、2009年和2010年种植季在尼日利亚北部不同地点采集的10份手指粟(Eleusine coracana (L) Gaertn)种质资源的形态多样性进行了研究。在三个种植季节,采用随机完全区组设计(RCBD),在keffi和Gwagwalada两个地点各种植3个重复。在这两个地点的三个季节的实地研究采用了统一的农业做法。采用标准的五指稷描述符,对其株高、叶长、叶径、指长、指宽、指数、千粒重等形态性状进行田间记录。结果表明,Ex-Kwi的株高与其他9个品种差异显著,而Ex-Riyom的最高叶长差异显著(p <0.05)。同样,在多地点试验的三个种植季节中,在所有受试材料中,手指的数量和长度以及1000粒重都观察到显著变化。对不同材料的表型和基因型性状进行评价,结果表明,各基因型在株高、千粒重、叶长和分蘖数等性状上表现出显著的遗传多样性;显著性水平为0.05。这些结果表明,在选择的形态性状之间存在着很高的变异性。具体来说,87%的变异可以用方差分析模型解释,只有13%的变异无法解释。基于形态特征的聚类分析显示6个主要的不同类群,其中一个地方品种形成独立的聚类,用于3年的聚类分析。
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引用次数: 9
Evaluation of genetic integrity of tomato seeds during ageing by microsatellite markers 用微卫星标记评价番茄种子老化过程中的遗传完整性
Pub Date : 2014-07-01 DOI: 10.1016/j.nigjg.2015.09.001
I.O. Daniel , O.W. Adabale , K.A. Adeboye , E.S. Aladele , O.T. Oduoye , J.A. Adetumbi , A. Boerner

The objective of this project was to evaluate ageing-induced genetic changes during storage of tomato seeds. Seeds of 10 accessions of tomatoes were thus subjected to artificial ageing in chambers conditioned to 55 °C and 72 ± 2% RH for 72 h. Seed survival data were used to estimate probit parameters. Genetic changes during the seed ageing course were evaluated by microsatellite (SSR) analysis using a Direct PCR™ kit., The SSR primer sequences (except SGN-14430) optimized the gene markers for the tomato accessions and are thus recommended for detecting genetic changes during seed storage. Genetic distances were calculated using PAST™ software and percentage genetic integrity was estimated from the genetic distance matrices. Probit analysis showed that P50 estimates was least in accession LOO169 (7 days) and highest in accession 09/044 (64.4 days). Seeds having lower P50 estimates showed lower estimates of genetic integrity. Lowest estimate of average genetic integrity was 99.21% when estimates of genetic distances were compared between 0 and 72 h of artificial ageing. The results showed ageing-induced genetic deterioration during artificial ageing thus suggests possibility of losses in genetic integrity of seeds in storage at a specific physiological (germinability) benchmark. For tomatoes, this study shows that seed germinability benchmark for genetic changes during ageing was approximately 42%. Comparison of tomato seeds stored in the NACGRAB gene bank for 2 years and freshly harvested seeds, validated the artificial seed ageing result and the estimated germination benchmark for declining genetic integrity in tomato seeds.

本研究的目的是评价番茄种子贮藏过程中老化引起的遗传变化。因此,将10份番茄材料的种子在55°C和72±2% RH的条件下人工老化72小时。种子存活数据用于估计probit参数。使用Direct PCR™试剂盒通过微卫星(SSR)分析评估种子老化过程中的遗传变化。SSR引物序列(除SGN-14430外)优化了番茄材料的基因标记,因此推荐用于检测种子储存过程中的遗传变化。使用PAST™软件计算遗传距离,并根据遗传距离矩阵估计遗传完整性百分比。Probit分析显示,菌株LOO169的P50估计值最小(7 d),菌株09/044的P50估计值最高(64.4 d)。具有较低P50估计值的种子显示较低的遗传完整性估计值。在人工老化0至72小时的遗传距离估计值中,平均遗传完整性的最低估计值为99.21%。结果表明,在人工老化过程中,衰老引起的遗传退化表明,种子在特定生理(发芽)基准下储存的遗传完整性可能会丧失。对于西红柿,本研究表明种子在老化过程中遗传变化的发芽基准约为42%。将NACGRAB基因库中保存2年的番茄种子与新鲜收获的种子进行比较,验证了人工种子老化结果和估计的番茄种子遗传完整性下降的萌发基准。
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引用次数: 4
Assessment of hybrids of drought tolerant maize (Zea mays L.) inbred lines for grain yield and other traits under stress managed conditions 抗旱玉米(Zea mays L.)自交系杂交种在胁迫条件下的产量及其他性状评价
Pub Date : 2014-07-01 DOI: 10.1016/j.nigjg.2015.06.004
Moses A. Adebayo , Abebe Menkir

Introduced maize (Zea mays L.) germplasm can serve as important sources of favorable alleles for enhancing the performance of new maize varieties and hybrids under drought stress conditions. Ninety-six elite maize hybrids alongside four hybrid checks were evaluated for grain yield and other agronomic traits under managed stress conditions over two seasons at Ikenne, Nigeria. Hybrids differed significantly for grain yield and other measured traits under both drought stress and well-watered conditions. Grain yield varied from 444 to 3022 kg ha−1 under drought stress, and from 3827 to 8887 kg ha−1 under full irrigation. Drought stress reduced grain yield by 70%. Each of the top 10 yielders under drought stress produced >2500 kg ha−1 and had a yield advantage of >10% over the best check. Three hybrids namely; ADL47 × EXL15, ADL41 × EXL15 and EXL02 × ADL47, produced competitive yields under both irrigation treatments.

引种玉米(Zea mays L.)种质资源可以作为提高玉米新品种和杂交种在干旱胁迫条件下性能的有利等位基因的重要来源。在尼日利亚Ikenne,对96个优良玉米杂交种和4个杂交种在管理胁迫条件下的籽粒产量和其他农艺性状进行了两个季节的评价。在干旱胁迫和水分充足的条件下,杂交种在籽粒产量和其他测量性状上均存在显著差异。干旱胁迫下的产量为444 ~ 3022 kg ha - 1,全灌条件下的产量为3827 ~ 8887 kg ha - 1。干旱胁迫使粮食减产70%。在干旱胁迫下,产量最高的10个品种的产量均为2500公斤/公顷,产量比最佳对照高出10%。三个杂种,即;ADL47 × EXL15、ADL41 × EXL15和EXL02 × ADL47在两种灌溉处理下均具有竞争力。
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引用次数: 34
Uses and variation in some under-exploited leaf vegetables of Osun State, Nigeria 尼日利亚奥松州一些未充分开发的叶菜的使用和变异
Pub Date : 2008-10-27 DOI: 10.4314/NJG.V18I1.42296
O. Adebooye, I. Obisesan
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引用次数: 0
Segregation pattern of pubescence, pigmentation and pod orientation genes in West African okra ( Abelmoschus caillei [A. Chev.] stevels). 西非秋葵(Abelmoschus caillei)短柔毛、色素沉着和荚果取向基因的分离模式[j]。Chev。] stevels)。
Pub Date : 2008-10-27 DOI: 10.4314/NJG.V18I1.42285
O. Kehinde, O. Adeniji
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引用次数: 4
Screening Pearl Millet for resistance to Striga hermonthica in Sahel ecology of Northern Nigeria 筛选珍珠粟对尼日利亚北部萨赫勒地区斯特拉加菌的抗性
Pub Date : 2008-10-27 DOI: 10.4314/NJG.V18I1.42297
S. Aladele, O. Mustapha
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引用次数: 1
Inheritance pattern of quantitative characters crosses of Lycopersicon species 番茄属植物数量性状杂交遗传模式研究
Pub Date : 2008-10-27 DOI: 10.4314/NJG.V18I1.42291
M. Uguru, A. Atugwu
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引用次数: 0
期刊
Nigerian Journal of Genetics
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