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Effect of Electroacupuncture on Intestinal Mucosal Barrier in IBS-D Rats: Analysis Based on RNA-seq. 电针对IBS-D大鼠肠黏膜屏障的影响:基于RNA-seq分析。
IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-05-27 DOI: 10.2174/0113862073395229250513074835
Jingru Ruan, Jingwei Zhu, Kuiwu Li, Ziye Wang, Ting Wang, Xiaoyu Han, Xiaomin Li, Yucheng Fang, Xiaoge Song, Haoran Chu
<p><strong>Objective: </strong>Currently, transcriptome-level investigations into the therapeutic mechanisms of electroacupuncture (EA) on intestinal mucosal barrier dysfunction in diarrhoea-predominant irritable bowel syndrome (IBS-D) models remain scarce. This study was designed to establish a comprehensive competing endogenous RNA (ceRNA) network through integrated RNA sequencing (RNA-seq) and bioinformatics analyses while elucidating the underlying mechanisms through which EA restores intestinal barrier integrity in IBS-D rats via modulation of the long non-coding RNA (lncRNA)-microRNA (miRNA) -messenger RNA (mRNA) regulatory network.</p><p><strong>Methods: </strong>The IBS-D model was established by neonatal maternal separation (NMS), 4% acetic acid enema, and restrain stress (RS). The rats were randomly divided into three groups: control, model and EA groups. After 2 weeks of EA, the morphological changes of the rat colon were observed by hematoxylin-eosin staining (HE) and Transmission electron microscope (TEM), and the expression of substances related to the damage of the intestinal mucosal barrier was detected by Enzyme-linked Immunosorbent Assay (ELISA) and Western blot (WB) to verify the protective effect of EA on the intestinal mucosal barrier of IBS-D rats. Then RNA-seq was used to analyse rat colon differentially expressed RNAs (DE RNAs) and construct relevant ceRNA networks. Subsequently, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were performed on the differentially expressed mRNAs (DE mRNAs) altered by EA to elucidate the mechanism of EA in improving the damage of the intestinal mucosal barrier. Finally, Real-Time Quantitative Reverse Transcription PCR (RT-qPCR) was used to verify the RNA-seq results, and WB and immunofluorescence (IF) were used to verify the involvement of mast cells (MCs) in the relevant signalling pathways regulated by EA.</p><p><strong>Results: </strong>Firstly, EA had an alleviating effect on the intestinal mucosal barrier damage in IBS-D rats. Then, RNAseq results showed that 426 DE mRNAs, 342 differentially expressed lncRNAs (DE lncRNAs) and 10 differentially expressed miRNAs (DE miRNAs) were up-regulated and 429 DE mRNAs, 362 DE lncRNAs and 48 DE miRNAs were down-regulated by EA. Meanwhile, the ceRNA networks of 7 DE lncRNAs-miR-139-3p-Bid and 7 DE lncRNAs-miR-378b-Slc4a5 were successfully constructed. GO indicated that EA protected the intestinal mucosal barrier of IBS-D rats mainly by regulating a series of defense responses (e.g., against viruses and bacteria), participating in regulating the secretion and transport of hormones, and affecting the function of cytokines. KEGG indicated that there were key signal pathways such as antigen processing and presentation, neuroactive ligand-receptor interaction, PPAR signaling pathway and glutathione metabolism, which were related to the participation of MC in immune inflammation after degranulation. RT-qPCR result
目的:目前,关于电针(EA)治疗腹泻型肠易激综合征(IBS-D)模型肠黏膜屏障功能障碍机制的转录组水平研究仍然很少。本研究旨在通过综合RNA测序(RNA-seq)和生物信息学分析,建立一个全面的竞争内源性RNA (ceRNA)网络,同时阐明EA通过调节长链非编码RNA (lncRNA)-微RNA (miRNA) -信使RNA (mRNA)调控网络恢复IBS-D大鼠肠道屏障完整性的潜在机制。方法:采用新生儿产妇分离(NMS)、4%乙酸灌肠和抑制应激(RS)建立IBS-D模型。将大鼠随机分为3组:对照组、模型组和EA组。EA给药2周后,采用苏木精-伊红染色(HE)和透射电镜(TEM)观察大鼠结肠形态变化,采用酶联免疫吸附试验(ELISA)和Western blot (WB)检测肠黏膜屏障损伤相关物质的表达,验证EA对IBS-D大鼠肠黏膜屏障的保护作用。然后利用RNA-seq技术分析大鼠结肠差异表达rna (DE rna),构建相应的ceRNA网络。随后,对EA改变的差异表达mrna (DE mrna)进行基因本体(GO)和京都基因基因组百科全书(KEGG)富集分析,阐明EA改善肠黏膜屏障损伤的机制。最后,利用实时定量反转录PCR (RT-qPCR)验证RNA-seq结果,利用WB和免疫荧光(IF)验证肥大细胞(MCs)是否参与了EA调控的相关信号通路。结果:首先,EA对IBS-D大鼠肠黏膜屏障损伤有缓解作用。然后,RNAseq结果显示,EA上调了426个DE mrna、342个差异表达lncRNAs (DE lncRNAs)和10个差异表达miRNAs (DE miRNAs),下调了429个DE mrna、362个DE lncRNAs和48个DE miRNAs。同时,成功构建了7个DE lncRNAs- mir -139-3p- bid和7个DE lncRNAs- mir -378b- slc4a5的ceRNA网络。GO提示EA对IBS-D大鼠肠黏膜屏障的保护主要通过调节一系列防御反应(如对病毒、细菌的防御反应),参与调节激素的分泌和转运,影响细胞因子的功能。KEGG表明,MC参与脱颗粒后免疫炎症反应的关键信号通路包括抗原加工递呈、神经活性配体-受体相互作用、PPAR信号通路和谷胱甘肽代谢等。RT-qPCR结果与RNA-seq结果一致。进一步的实验证实,EA通过抑制MC的激活,改善了IBS-D大鼠肠黏膜屏障的损伤。结论:本研究通过RNA-seq探索了EA治疗IBSD大鼠的多系统、多层次、多靶点机制,发现EA可改善IBSD大鼠肠黏膜屏障损伤。EA的整体调控作用与通过影响IBS-D大鼠多基因调控由7个DE lncRNAs-miR-139-3p-Bid和7个DE lncRNAs-miR-378b-Slc4a5组成的ceRNA网络有关。
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引用次数: 0
Evaluation of Cranberry as a Novel Therapeutic Strategy for Intracerebroventricular (ICV) Quinolinic Acid-induced Cognitive Impairment in Rats. 蔓越莓对大鼠脑室内喹啉酸诱导的认知障碍的新治疗策略的评价。
IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-05-26 DOI: 10.2174/0113862073375293250520050009
Li Tao, Deepika Kumari, Sai Kumar Badam, Harpreet Kaur, Vikrant Dalwal, Pallvi Kumari, Ritu Kainth

Background: Cranberry (Vaccinium macrocarpon) is a small, red fruit that has been widely recognized for its potential health benefits. The cranberry is rich in antioxidant-rich bioactive chemicals and nutritious components like essential vitamins, minerals, and antioxidants; for example, vitamin C, vitamin E, magnesium, copper, potassium, anthocyanins, flavonoids, phenolic acid, etc. Cranberries are thought to offer a variety of health advantages because they are high in Polyphenols (PPs), which have significant antioxidant activity.

Objectives: The objective of the current study was to evaluate the neuroprotective effect of cranberries on behavioural and neurochemical abnormalities induced by Quinolinic Acid (QA) treatment through Intracerebroventricular (ICV) injection in Wistar rats, as well as to identify the synaptic plasticity and cognition by modulating signaling cascades, such as the ERK and PI3K/AKT pathways, which offer an adjunct treatment to slow or enhance the effects of conventional treatment.

Material and methods: A total of thirty Wistar rats were randomly assigned to several experimental groups. QA (240 nM in normal saline) was administered via ICV. Thereafter, cranberry (0.5g/kg p.o.) with QA, and high-dose cranberry group (2g/kg p.o.) with QA were administered to the animals for 21 days. The dosage of QA and cranberries was chosen based on earlier experimental research.

Result: The study found that cranberries significantly decrease cognitive deficits and motor impairments caused by Quinolinic Acid (QA) in rats. QA treatment affected cognitive function, as demonstrated by the Novel object recognition and the Morris water maze tests, and caused substantial disturbances in motor activity, as demonstrated by rotarod and footprint analyses. QA-treated rats also exhibited higher oxidative and nitrosative stress, lower Glutathione (GSH) levels, higher nitrite and lipid peroxidation, cholinergic dysfunction, and abnormalities in mitochondrial complexes I, II, and IV in the striatum and hippocampus regions. Cranberry (2 g/kg p.o.) significantly enhanced memory, learning, and motor coordination. Cranberry supplementation enhanced GSH levels, decreased MDA concentration, and improved mitochondrial function and cholinergic activity. According to a histological study, cranberries can protect against neuronal degeneration and inflammation.

Conclusion: These findings indicate that cranberries may have neuroprotective properties, presumably through antioxidant, anti-inflammatory, and anti-excitotoxic processes that promote brain plasticity, neurogenesis, and neurotransmitter systems. This establishes the potential of cranberries as a prospective natural treatment for cognitive deficits and neurodegenerative illnesses, suggesting the need for additional research to understand the underlying mechanisms and human application better.

背景:蔓越莓(Vaccinium macrocarpon)是一种小而红的水果,因其潜在的健康益处而被广泛认可。蔓越莓富含富含抗氧化剂的生物活性化学物质和营养成分,如必需维生素、矿物质和抗氧化剂;例如,维生素C、维生素E、镁、铜、钾、花青素、类黄酮、酚酸等。蔓越莓被认为具有多种健康益处,因为它们富含多酚(PPs),具有显著的抗氧化活性。目的:本研究旨在评估蔓越莓对脑室注射喹诺啉酸(QA)致Wistar大鼠行为和神经化学异常的神经保护作用,并通过调节ERK和PI3K/AKT等信号级联通路,确定突触可塑性和认知能力,这些信号级联通路可作为减缓或增强常规治疗效果的辅助治疗。材料与方法:选用Wistar大鼠30只,随机分为几个实验组。经ICV给药QA (240 nM生理盐水)。随后分别给予含有QA的蔓越莓(0.5g/kg p.o)组和含有QA的高剂量蔓越莓组(2g/kg p.o) 21 d。QA和蔓越莓的用量是在前期实验研究的基础上选择的。结果:研究发现蔓越莓能显著降低大鼠因喹啉酸(QA)引起的认知缺陷和运动障碍。正如新物体识别和莫里斯水迷宫测试所证明的那样,QA治疗影响了认知功能,并引起了运动活动的严重干扰,正如旋转杆和足迹分析所证明的那样。qa处理的大鼠还表现出更高的氧化和亚硝化应激,更低的谷胱甘肽(GSH)水平,更高的亚硝酸盐和脂质过氧化,胆碱能功能障碍以及纹状体和海马区域线粒体复合物I, II和IV的异常。蔓越莓(2 g/kg)显著提高记忆、学习和运动协调能力。补充蔓越莓可提高GSH水平,降低MDA浓度,改善线粒体功能和胆碱能活性。根据一项组织学研究,蔓越莓可以防止神经元退化和炎症。结论:这些发现表明蔓越莓可能具有神经保护特性,可能是通过抗氧化、抗炎和抗兴奋毒性的过程,促进大脑可塑性、神经发生和神经递质系统。这建立了蔓越莓作为认知缺陷和神经退行性疾病的潜在天然治疗的潜力,表明需要进一步的研究来更好地了解其潜在机制和人类应用。
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引用次数: 0
Influence of Mycoplasma Resistance Genes on Pediatric Mycoplasma Pneumonia Treatment and Determinants for Second-line Antimicrobial Adjustment. 支原体耐药基因对儿童肺炎支原体治疗的影响及二线抗菌药物调整的决定因素。
IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-05-22 DOI: 10.2174/0113862073364492250507095636
Boyin Deng, Wenhui Dong, Jie Cao, Jiwei Zhou

Objective: The objective of this study is to evaluate the role of mycoplasma resistance genes in pediatric mycoplasma pneumonia and to identify the factors that necessitate antibiotic adjustments.

Methods: We retrospectively analyzed clinical data from children diagnosed with mycoplasma pneumonia at Chongqing Medical University Children's Hospital (January-October 2023). We categorized patients based on antibiotic treatment adjustments: the antibiotic adjustment group and the no adjustment group. We compared demographic characteristics, clinical outcomes, and the gene resistance rate that point mutations A2063G and A2064G in the 23S rRNA between groups. Logistic regression was employed to determine the factors prompting a switch from macrolides to alternative antibiotics.

Results: The study included 551 cases, with 341 in the no adjustment group and 210 in the antibiotic adjustment group (54 switched to doxycycline, 156 to levofloxacin). There was no significant difference in the prevalence of resistance genes between the groups (71.8% vs. 71.4%; P=0.916). Significant differences were observed in hospital stay duration, C-reactive protein (CRP), D-dimer, fibrinogen, procalcitonin levels, and lung consolidation (P<0.05). Logistic regression identified elevated CRP and procalcitonin levels as independent predictors of the need for alternative antibiotics.

Conclusion: Resistance genes do not predict the need for second-line antibiotics in pediatric mycoplasma pneumonia; however, elevated CRP, and procalcitonin levels significantly correlate with this necessity.

目的:本研究的目的是评估支原体耐药基因在小儿支原体肺炎中的作用,并确定需要调整抗生素的因素。方法:回顾性分析重庆医科大学儿童医院2023年1 - 10月诊断为肺炎支原体患儿的临床资料。我们根据抗生素治疗调整对患者进行分类:抗生素调整组和不调整组。我们比较了组间23S rRNA中A2063G和A2064G点突变的人口学特征、临床结果和基因耐药率。采用Logistic回归来确定促使大环内酯类药物转向替代抗生素的因素。结果:共纳入551例,无调整组341例,抗生素调整组210例(54例改用强力霉素,156例改用左氧氟沙星)。两组间耐药基因患病率差异无统计学意义(71.8% vs. 71.4%;P = 0.916)。在住院时间、c反应蛋白(CRP)、d-二聚体、纤维蛋白原、降钙素原水平和肺实变方面观察到显著差异(结论:耐药基因不能预测儿童支原体肺炎对二线抗生素的需求;然而,升高的CRP和降钙素原水平与这种必要性显著相关。
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引用次数: 0
Dengue is Still a Complicated Disease. 登革热仍然是一种复杂的疾病。
IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-05-21 DOI: 10.2174/0113862073394882250520072757
Rituraj Niranjan
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引用次数: 0
Inhibition of Sox4 Increases the Sensitivity of Drug-resistant Melanoma Cells to Cisplatin through the P38 Signaling Pathway. 抑制Sox4通过P38信号通路增加耐药黑色素瘤细胞对顺铂的敏感性
IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-05-19 DOI: 10.2174/0113862073231734231102074936
Cheng Qiong, Zuo Fuguo

Background: SRY-Box Transcription Factor 4 (Sox4) has been found to be overexpressed in a number of malignancies and is linked to medication resistance. The underlying mechanism of Sox4 in cisplatin-resistant melanomas, however, remains unknown.

Methods: Immunohistochemistry (IHC) was used to examine the expression of Sox4 in melanoma, pigmented nevi, and normal skin tissue. Induction in vitro was used to create the cisplatin- resistant cell lines SK-MEL-28R and A375R. The CCK8 test was used to determine the IC50 values of cisplatin-resistant cells. Lentivirus shut down Sox4 in SK-MEL-28R and A375R cells. The Affymetrix GeneChip array was then utilized to detect changes in signaling pathways in SK-MEL-28R interfering with Sox4. Western blot, qRT-PCR, flow cytometry, and a caspase 3 activity kit were used to confirm the biological process of Sox4 impacting cisplatin resistance in melanoma.

Results: Sox4 expression in melanoma was substantially higher than in pigmented nevus and normal skin tissue (p<0.05, p<0.01).SK-MEL-28R and A375R melanoma cisplatin-resistant strains were created effectively. They were 12.6 and 10.2 times more resistant to cisplatin, respectively than the parental cells. P-gp protein expression was substantially higher in cisplatinresistant strains than in parental strains. Sox4 inhibition lowered the IC50 value of cisplatin in resistant cells. (The IC50 value of SK-MEL-28R+NC was 122.7 mg/L and 24.4 mg/L for SKMEL- 28R+sh-sox4; the IC50 value of A375R+NC was 40.55 mg/L and 5.99 mg/L for A375R+sh-sox4). Meanwhile, Sox4 knockdown causes S phase arrest and enhanced caspase-3 activity in cisplatin-resistant melanoma cells. Sox4 knockdown led to activation of the P38 signaling pathway in resistant cells, according to genome-wide expression analysis, qRT-PCR, and Western blot detection.

Conclusion: Our findings imply that inhibiting Sox4 can improve the sensitivity of drugresistant melanoma cells to cisplatin via the P38 signaling pathway, thus opening up a new route for melanoma treatment.

背景:SRY-Box转录因子4 (Sox4)已被发现在许多恶性肿瘤中过表达,并与耐药有关。然而,Sox4在顺铂耐药黑色素瘤中的潜在机制尚不清楚。方法:采用免疫组化(IHC)方法检测Sox4在黑色素瘤、色素痣和正常皮肤组织中的表达。体外诱导制备顺铂耐药细胞株SK-MEL-28R和A375R。CCK8试验测定顺铂耐药细胞的IC50值。慢病毒关闭SK-MEL-28R和A375R细胞中的Sox4。然后利用Affymetrix基因芯片阵列检测SK-MEL-28R干扰Sox4信号通路的变化。采用Western blot、qRT-PCR、流式细胞术、caspase 3活性检测等方法验证Sox4影响黑色素瘤顺铂耐药的生物学过程。结果:Sox4在黑色素瘤中的表达明显高于色素痣和正常皮肤组织(pp4)。结论:抑制Sox4可通过P38信号通路提高耐药黑色素瘤细胞对顺铂的敏感性,从而为黑色素瘤的治疗开辟了一条新的途径。
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引用次数: 0
Association of Increased SOAT2 Expression with Abnormal Cholesterol Esterification and Testosterone Deficiency in Late-Onset Hypogonadism Rats. 迟发性性腺功能减退大鼠中SOAT2表达增加与胆固醇酯化异常和睾酮缺乏的关系
IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-05-19 DOI: 10.2174/0113862073402760250516120303
Min Pan, Ziao Liu, Jingya Li, Xiaohan Ni, Yujia Wang, Lingling Zhang, Tongsheng Wang

Background: Late-Onset Hypogonadism (LOH) is a prevalent age-related condition in men, characterized by a decline in testosterone (T) and associated symptoms.

Objective: This study explored the mechanism of T deficiency in LOH.

Methods: Male SD rats were raised until 20 months of age in order to establish the LOH models. The hormone level and sperm quality were examined. The behavior experiments were carried out to assess whether LOH rats had anxiety and cognitive dysfunction. RNA-seq was used to explore the differential gene in the testis of LOH rats, revealing the molecular mechanism of LOH.

Results: LOH rats exhibited cognitive impairment and anxiety. The sperm quality was decreased, and dysfunction of the Hypothalamic-Pituitary-Gonadal (HPG) axis was observed in LOH rats. Testosterone biosynthesis enzymes (including StAR, Cyp17A1, and HSD17β) were suppressed, reducing T levels. RNA-seq revealed that cholesterol metabolism and steroid hormone biosynthesis were abnormal. The expression of Sterol O-Acyltransferase 2 (SOAT2) was upregulated in the Leydig cells in the testes of LOH rats. Meanwhile, the testicular Cholesterol Ester (CE) increased, and Free Cholesterol (FC) decreased in the LOH rats.

Conclusion: These results indicated that upregulation of SOAT2 decreased FC and increased CE, which led to testosterone deficiency and further affected spermatogenesis and the HPG axis.

背景:迟发性性腺功能减退症(LOH)是男性中一种普遍的与年龄相关的疾病,其特征是睾酮(T)下降和相关症状。目的:探讨LOH中T缺乏的机制。方法:将雄性SD大鼠饲养至20月龄,建立LOH模型。检查激素水平和精子质量。行为学实验评估LOH大鼠是否存在焦虑和认知功能障碍。采用RNA-seq技术对LOH大鼠睾丸中的差异基因进行了检测,揭示了LOH的分子机制。结果:LOH大鼠表现出认知障碍和焦虑。LOH大鼠精子质量下降,下丘脑-垂体-性腺(HPG)轴功能障碍。睾酮生物合成酶(包括StAR、Cyp17A1和HSD17β)被抑制,T水平降低。RNA-seq显示胆固醇代谢和类固醇激素生物合成异常。LOH大鼠睾丸间质细胞SOAT2表达上调。同时,LOH大鼠睾丸胆固醇酯(CE)升高,游离胆固醇(FC)降低。结论:SOAT2上调可使FC降低,CE升高,导致睾酮缺乏,进而影响精子发生和HPG轴。
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引用次数: 0
Serum Metabolomic Profiles Predict Sensitivity and Toxicity to Platinum-Fluorouracil Chemotherapy in a Gastric Cancer Xenograft Model. 血清代谢组学分析预测胃癌异种移植模型对铂-氟尿嘧啶化疗的敏感性和毒性
IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-05-15 DOI: 10.2174/0113862073379369250513115909
Dong Yang, Yuanlin Liu, Xiangyu Meng, Chao Wang, Meng Zhang, Tao Zhang, Yefu Liu

Background: The mechanisms of chemotherapy sensitivity and toxicity are complex. Metabolomics can better reflect the status of anticancer drugs, tumors, and hosts simultaneously.

Aim: To identify metabolites and metabolic pathways linked to varying sensitivity and toxicity to chemotherapy in gastric cancer.

Methods: Mice were implanted with human gastric cancer cells through subcutaneous xenografting, and then treated with the PF (platinum-fluorouracil) regimen, with saline serving as the control. Tumor growth was monitored by measuring tumor volume, and body weight was recorded on Days 0, 2, 4, 6, and 8. Kidney damage was assessed using H&E staining. To analyze differential responses, PF-treated mice were grouped separately according to chemotherapy sensitivity (high/medium/low via tumor response) and toxicity (high/medium/low via body weight changes). Serum metabolomics was evaluated using Mass Spectrometry.

Results: Platinum-Fluorouracil (PF) chemotherapy significantly reduced tumor weight in mice (164.7 ± 73.5 mg vs. 334.0 ± 107.5 mg; 54.4% inhibition rate), although it also induced notable body weight loss and renal toxicity compared to controls. Serum metabolomic analysis revealed significant differences between PF and control groups, involving metabolites like deoxymethacin and dehydrocorticosterone, associated with AMPK and cortisol synthesis/secretion pathways. Further comparisons highlighted: (1) High- vs. low-sensitivity subgroups differed significantly in metabolites, such as palmitoyl-CoA and indoleacetic acid (linked to AGE-RAGE, insulin resistance, and AMPK pathways). (2) High- vs. low-toxicity subgroups displayed significant metabolic differences, including methylguanosine and methylcytidine (implicated in ferroptosis, ether lipid, and fatty acid metabolism pathways).

Conclusion: The PF regimen effectively inhibits the growth of subcutaneous tumors in nude mice, while causing varying levels of sensitivity and toxicity in tumor chemotherapy. These observed effects of sensitivity and toxicity are linked to underlying metabolic mechanisms.

背景:化疗的敏感性和毒性机制是复杂的。代谢组学可以更好地同时反映抗癌药物、肿瘤和宿主的状态。目的:确定与胃癌化疗不同敏感性和毒性相关的代谢物和代谢途径。方法:采用皮下异种移植法将人胃癌细胞植入小鼠体内,然后给予PF(铂-氟尿嘧啶)方案治疗,以生理盐水为对照。通过测量肿瘤体积监测肿瘤生长情况,并于第0、2、4、6、8天记录体重。H&E染色评估肾损害。为了分析不同的反应,根据化疗敏感性(通过肿瘤反应高/中/低)和毒性(通过体重变化高/中/低)将pf治疗小鼠分开分组。采用质谱法测定血清代谢组学。结果:铂-氟尿嘧啶(PF)化疗可显著降低小鼠肿瘤重量(164.7±73.5 mg vs. 334.0±107.5 mg);54.4%的抑制率),尽管与对照组相比,它也引起了显著的体重减轻和肾毒性。血清代谢组学分析显示,PF组与对照组之间存在显著差异,涉及与AMPK和皮质醇合成/分泌途径相关的代谢物,如脱氧methacin和脱氢皮质酮。进一步的比较表明:(1)高敏感性与低敏感性亚组在代谢物,如棕榈酰辅酶a和吲哚乙酸(与AGE-RAGE,胰岛素抵抗和AMPK途径相关)方面存在显著差异。(2)高毒性与低毒性亚组表现出显著的代谢差异,包括甲基鸟苷和甲基胞苷(涉及铁下垂,醚脂质和脂肪酸代谢途径)。结论:PF方案能有效抑制裸鼠皮下肿瘤的生长,但对肿瘤化疗有不同程度的敏感性和毒性。这些观察到的敏感性和毒性效应与潜在的代谢机制有关。
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引用次数: 0
Synergistic Interactions of Anthraquinones with Conventional Cancer Therapies. 蒽醌类药物与常规癌症治疗的协同作用。
IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-05-14 DOI: 10.2174/0113862073375723250505095935
Priyanka Sharma, Priya Ghanghas, Rituraj Niranjan, Sandeep Kumar

Background: Cancer is a major public health concern, and conventional treatments like surgery, chemotherapy, and radiotherapy are associated with several disadvantages, including chemoresistance, toxicity, and economic burden to the family of cancer patients. Thus, discovery of novel agents of natural agents to reduce these side effects is crucial. A series of studies have shown anthraquinones as a promising adjuvant in enhancing the effectiveness of standard cancer therapies.

Objective: This review explores the anticancer potential of anthraquinones and their role in enhancing standard chemotherapy.

Methodology: Various freely available databases, including PubMed, Scopus, Google Scholar and Web of Science were searched for updated and relevant information on anthraquinones and their use as an adjuvant with standard chemotherapeutic agents.

Results: In this article, we looked at the recent developments in the utilization of anthraquinones as adjuvants in chemotherapy. Further, we have elaborated the mechanism of action that anthraquinones target to chemosensitize the drug-resistant cancer cells.

Conclusion: This review provides updated information on emerging role and their potential to be utilized as adjuvants in augmenting the efficacy of conventional cancer therapies.

背景:癌症是一个主要的公共卫生问题,手术、化疗和放疗等传统治疗方法存在一些缺点,包括化疗耐药、毒性和癌症患者家庭的经济负担。因此,发现新的药物或天然药物来减少这些副作用是至关重要的。一系列的研究表明,蒽醌是一种很有前途的辅助剂,可以提高标准癌症治疗的有效性。目的:综述蒽醌类药物的抗癌潜力及其在标准化疗中的作用。方法:检索PubMed、Scopus、谷歌Scholar和Web of Science等免费数据库,检索有关蒽醌类药物及其作为标准化疗药物辅助使用的最新相关信息。结果:本文综述了近年来蒽醌类佐剂在化疗中的应用进展。进一步阐述了蒽醌类药物对耐药癌细胞化学致敏的作用机制。结论:这篇综述提供了关于新出现的作用和它们作为佐剂在提高常规癌症治疗效果方面的潜力的最新信息。
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引用次数: 0
Constipation and Psychiatric Disorders: A Bidirectional Mendelian Randomization Study. 便秘和精神疾病:一项双向孟德尔随机研究。
IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-05-14 DOI: 10.2174/0113862073378253250428071105
Xu Yang, Jie Kang, Xuan Zhang, Nan Sui

Background: Observational studies have shown a link between constipation (CN) and psychiatric disorders, including Schizophrenia (SP), Bipolar disorder (BD), Schizoaffective disorder (SD), and Parkinson's disease (PD). However, it is still unknown whether CN affects the occurrence and development of psychiatric disorders or whether psychiatric disorders cause the occurrence and development of CN. Therefore, this study used Mendelian randomization (MR) analysis to evaluate the relationship between CN and psychiatric disorders.

Method: We used genome-wide association studies (GWAS) to assess the relationship between constipation (N = 411, 623) and four psychiatric disorders, including SP ( N = 77, 096), BD (N = 51, 710), SD ( N = 210, 962), PD (N = 482, 730 ), using bidirectional MR analysis. Inverse variance weighting (IVW), MR Egger (ME) and Weighted median (WM) were used as causal analysis methods. Cochran's Q test, funnel plot, MR Egger intercept test and Leave-one-out analysis were used to detect sensitivity. Confounding factors were analyzed and eliminated by LDtrait to avoid influencing the final MR Analysis result.

Results: The results of positive MR analysis indicated that there was no evidence of influence of constipation on SP ( OR 1.043, 95%CI 0.946 - 1.149, P value = 0.398), BD (OR 1.114, 95%CI 0.995 - 1.248, P value = 0.062), SD (OR 0.934, 95%CI 0.674 - 1.294, P value = 0.682) and PD (OR 1.118, 95%CI 0.918 - 1.361, P value = 0.269) under gene prediction. Reverse MR analysis suggested that SP (OR 1.030, 95% CI 1.001-1.060, P value = 0.042) had a causal relationship with constipation. BD (OR 0.993, 95% CI 0.962-1.025, P value = 0.664), SD (OR 1.021, 95% CI 0.984-1.059, P value = 0.265) and PD (OR 1.004, 95% CI 0.974-1.035, P value = 0.790) were not associated with CN.

Conclusion: There was a positive association between SP and CN. CN may have no exact causal relationship with BD, SD and PD, and the interaction mechanism between these diseases needs to be further explored.

背景:观察性研究表明便秘(CN)与精神疾病之间存在联系,包括精神分裂症(SP)、双相情感障碍(BD)、分裂情感障碍(SD)和帕金森病(PD)。然而,CN是否影响精神障碍的发生和发展,或者精神障碍是否导致CN的发生和发展,目前尚不清楚。因此,本研究采用孟德尔随机化(MR)分析来评估CN与精神疾病的关系。方法:采用全基因组关联研究(GWAS)评估便秘(N = 411、623)与4种精神疾病(SP (N = 77、096)、BD (N = 51、710)、SD (N = 210、962)、PD (N = 482、730)的关系,采用双向MR分析。因果分析方法采用方差逆加权(IVW)、MR Egger (ME)和加权中位数(WM)。采用Cochran’s Q检验、漏斗图、MR Egger截距检验和留一分析检测敏感性。通过LDtrait分析和消除混杂因素,避免影响最终的MR分析结果。结果:MR阳性分析结果显示,在基因预测下,便秘对SP (OR 1.043, 95%CI 0.946 ~ 1.149, P值= 0.398)、BD (OR 1.114, 95%CI 0.995 ~ 1.248, P值= 0.062)、SD (OR 0.934, 95%CI 0.674 ~ 1.294, P值= 0.682)和PD (OR 1.118, 95%CI 0.918 ~ 1.361, P值= 0.269)无影响。反向MR分析提示SP (OR 1.030, 95% CI 1.001 ~ 1.060, P值= 0.042)与便秘有因果关系。BD (OR 0.993, 95% CI 0.962 ~ 1.025, P值= 0.664)、SD (OR 1.021, 95% CI 0.984 ~ 1.059, P值= 0.265)和PD (OR 1.004, 95% CI 0.974 ~ 1.035, P值= 0.790)与CN无关。结论:SP与CN呈正相关。CN与BD、SD、PD可能没有确切的因果关系,三者之间的相互作用机制有待进一步探讨。
{"title":"Constipation and Psychiatric Disorders: A Bidirectional Mendelian Randomization Study.","authors":"Xu Yang, Jie Kang, Xuan Zhang, Nan Sui","doi":"10.2174/0113862073378253250428071105","DOIUrl":"https://doi.org/10.2174/0113862073378253250428071105","url":null,"abstract":"<p><strong>Background: </strong>Observational studies have shown a link between constipation (CN) and psychiatric disorders, including Schizophrenia (SP), Bipolar disorder (BD), Schizoaffective disorder (SD), and Parkinson's disease (PD). However, it is still unknown whether CN affects the occurrence and development of psychiatric disorders or whether psychiatric disorders cause the occurrence and development of CN. Therefore, this study used Mendelian randomization (MR) analysis to evaluate the relationship between CN and psychiatric disorders.</p><p><strong>Method: </strong>We used genome-wide association studies (GWAS) to assess the relationship between constipation (N = 411, 623) and four psychiatric disorders, including SP ( N = 77, 096), BD (N = 51, 710), SD ( N = 210, 962), PD (N = 482, 730 ), using bidirectional MR analysis. Inverse variance weighting (IVW), MR Egger (ME) and Weighted median (WM) were used as causal analysis methods. Cochran's Q test, funnel plot, MR Egger intercept test and Leave-one-out analysis were used to detect sensitivity. Confounding factors were analyzed and eliminated by LDtrait to avoid influencing the final MR Analysis result.</p><p><strong>Results: </strong>The results of positive MR analysis indicated that there was no evidence of influence of constipation on SP ( OR 1.043, 95%CI 0.946 - 1.149, P value = 0.398), BD (OR 1.114, 95%CI 0.995 - 1.248, P value = 0.062), SD (OR 0.934, 95%CI 0.674 - 1.294, P value = 0.682) and PD (OR 1.118, 95%CI 0.918 - 1.361, P value = 0.269) under gene prediction. Reverse MR analysis suggested that SP (OR 1.030, 95% CI 1.001-1.060, P value = 0.042) had a causal relationship with constipation. BD (OR 0.993, 95% CI 0.962-1.025, P value = 0.664), SD (OR 1.021, 95% CI 0.984-1.059, P value = 0.265) and PD (OR 1.004, 95% CI 0.974-1.035, P value = 0.790) were not associated with CN.</p><p><strong>Conclusion: </strong>There was a positive association between SP and CN. CN may have no exact causal relationship with BD, SD and PD, and the interaction mechanism between these diseases needs to be further explored.</p>","PeriodicalId":10491,"journal":{"name":"Combinatorial chemistry & high throughput screening","volume":" ","pages":""},"PeriodicalIF":1.6,"publicationDate":"2025-05-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144076431","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
An Analysis of Effective Components of Pulsatillae radix Using UHPLC-QTOF-MS/MS and Network Pharmacology to Investigate its Effects on Ulcerative Colitis. 白头翁有效成分的UHPLC-QTOF-MS/MS及网络药理学分析对溃疡性结肠炎的影响。
IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-05-14 DOI: 10.2174/0113862073358579250428103652
Jiaojiao Zhang, Xing Chen, Yuman Li, Xue Ma, Nuo Xu, Tuanjie Wang, Yun Shi, Kunming Qin

Background: Pulsatillae radix (PR), a medicinal root plant and a well-known Chinese herbal remedy, is primarily used for its heat-clearing, detoxifying, blood-cooling, and antiinflammatory properties. This study aimed to investigate the underlying mechanisms by which PR exerts therapeutic effects on ulcerative colitis (UC) through an integrated approach, combining ultra-high performance liquid chromatography with quadrupole time-of-flight mass spectrometry (UHPLC-Q-TOF-MS/MS), network pharmacology, and molecular docking.

Methods: The constituents of PR were systematically analyzed using UHPLC-Q-TOF-MS/MS. Potential targets of active components were identified via the SwissTargetPrediction and PharmMapper databases, while UC-related disease targets were retrieved from GeneCard, OMIM, and other relevant databases. Overlapping targets between PR and UC were determined using Venn analysis. Cytoscape software facilitated the construction of the compound-disease-target network. The STRING database was employed to generate a protein-protein interaction (PPI) network for the intersecting targets, and core targets were identified using the CytoNCA plugin. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were conducted using the DAVID platform. Lastly, molecular docking of key components with target proteins was carried out using PyMOL.

Results: A total of 27 active compounds, 237 drug targets, and 4622 disease targets were identified. Intersection analysis revealed 141 shared targets, while the PPI network identified 10 hub targets. GO and KEGG enrichment analyses indicated that the hub targets were primarily associated with phosphorylation, cytoplasmic functions, nuclear receptor activity, as well as pathways related to the advanced glycation end products-receptor for advanced glycation end products (AGE-RAGE) signaling, T cell receptor (TCR) signaling, lipid and cholesterol metabolism, and various cancer-related pathways. Molecular docking experiments demonstrated that (+)- pinoresinol, cichoric acid, β-ecdysone, pulsatilla saponin D, 23-HBA, and AB4 exhibited stable binding to PIK3R1, TLR4, and ESR1, with AB4 forming the most stable complex with ESR1.

Conclusion: This study established a rapid and effective UHPLC-Q-TOF-MS/MS method for characterizing the main chemical components of PR. Using network pharmacology and molecular docking, the active components and potential mechanisms of PR involved in the UC treatment were investigated, providing a foundation for future experimental studies on pharmacodynamics and the underlying mechanisms.

背景:白头翁(pulsatilae radix, PR)是一种药用根茎植物,是一种著名的中草药,主要用于清热、解毒、凉血和抗炎。本研究旨在通过超高效液相色谱-四极杆飞行时间质谱(UHPLC-Q-TOF-MS/MS)、网络药理学、分子对接等综合手段,探讨PR对溃疡性结肠炎(UC)的治疗作用机制。方法:采用UHPLC-Q-TOF-MS/MS对其成分进行系统分析。通过SwissTargetPrediction和PharmMapper数据库确定活性成分的潜在靶点,而从GeneCard、OMIM和其他相关数据库检索uc相关疾病靶点。利用Venn分析确定PR和UC之间的重叠目标。Cytoscape软件促进了化合物-疾病-靶点网络的构建。利用STRING数据库生成交叉靶点的蛋白-蛋白相互作用(protein-protein interaction, PPI)网络,利用CytoNCA插件对核心靶点进行鉴定。使用DAVID平台进行基因本体(GO)和京都基因与基因组百科全书(KEGG)途径富集分析。最后,利用PyMOL进行关键组分与靶蛋白的分子对接。结果:共鉴定出27个活性化合物、237个药物靶点和4622个疾病靶点。交叉分析揭示了141个共享目标,而PPI网络确定了10个枢纽目标。GO和KEGG富集分析表明,枢纽靶点主要与磷酸化、细胞质功能、核受体活性以及与晚期糖基化终产物受体(AGE-RAGE)信号传导、T细胞受体(TCR)信号传导、脂质和胆固醇代谢以及各种癌症相关途径相关。分子对接实验表明,(+)-松脂醇、菊苣酸、β-脱皮酮、白头草皂苷D、23-HBA和AB4与PIK3R1、TLR4和ESR1结合稳定,其中AB4与ESR1形成最稳定的配合物。结论:本研究建立了快速有效的UHPLC-Q-TOF-MS/MS表征PR主要化学成分的方法,通过网络药理学和分子对接,研究了PR参与UC治疗的有效成分和潜在机制,为后续的药效学实验研究和机制研究奠定了基础。
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引用次数: 0
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Combinatorial chemistry & high throughput screening
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