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Development of ATP13A2-deficient in vitro Model for PARK9 Parkinson’s Disease atp13a2缺陷PARK9帕金森病体外模型的建立
Q3 Medicine Pub Date : 2021-03-25 DOI: 10.2174/1574362416666210325112850
Y. Yap, E. Chowdhury, R. Koh, S. Chye, Kenny Gah Leong Voon, Iekhsan Othman, K. Ng
PARK9 familial Parkinson’s disease (PD) is caused by loss-of-function mutation in ATP13A2 gene in which the mutation impairs autophagic-lysosomal degradation pathway and induces intraneuronal accumulation of alpha-synuclein. RNA interference has been a useful tool to generate in vitro knockdown model to study the physiological role of gene. However, availability of validated ATP13A2-deficient in vitro model is limited. Hence, we developed the ATP13A2-deficient PD model by delivering ATP13A2 siRNA into neuroblastoma cells using carbonate apatite nanoparticles (CA NPs). CA NPs were fabricated using different concentrations of calcium chloride and characterised, in the presence or absence of ATP13A2 siRNA. Time-dependent stabilities of CA NPs and CA NPs-associated siRNA (CA-siRNA) complex were evaluated by pH, turbidity, size, and zeta potential measurements. The dissolution abilities at acidic condition of both complexes were investigated. Following that, green fluorescence protein (GFP) and four different siRNAs targeting ATP13A2 (siRNA_5, 6, 7 and 8) were transfected to cells with the fabricated CA NPs. Western blot was performed to determine the knockdown effect of the four siRNAs.It was found that 4 mM calcium chloride was ideal for CA NP formation while incubation time of 48 hours is required to maintain the stability of nanoparticles. Successful transfection was confirmed by detection of fluorescence signal from the GFP plasmid and subsequent silencing of this signal by transfecting GFP siRNA. Western blot analysis revealed that ATP13A2 protein expression was significantly reduced to 20% upon transfection with 20 nM of siRNA_5. ATP13A2-deficient PD model was successfully developed.
PARK9家族性帕金森病(PD)是由ATP13A2基因的功能缺失突变引起的,该突变损害自噬溶酶体降解途径并诱导α-突触核蛋白的神经内积累。RNA干扰已经成为一种有用的工具,可以生成体外敲除模型来研究基因的生理作用。然而,经验证的ATP13A2缺陷体外模型的可用性是有限的。因此,我们通过使用碳酸磷灰石纳米颗粒(CA NP)将ATP13A2 siRNA递送到神经母细胞瘤细胞中,开发了ATP13A2缺陷型PD模型。使用不同浓度的氯化钙制备CA NP,并在存在或不存在ATP13A2 siRNA的情况下进行表征。通过pH、浊度、大小和ζ电位测量来评估CA NPs和CA NPs相关siRNA(CA siRNA)复合物的时间依赖性稳定性。考察了两种配合物在酸性条件下的溶解能力。随后,将绿色荧光蛋白(GFP)和四种不同的靶向ATP13A2的siRNA(siRNA_5、6、7和8)转染到具有所制造的CA NP的细胞中。进行蛋白质印迹以确定四种siRNA的敲除作用。发现4mM氯化钙对于CA NP的形成是理想的,同时需要48小时的孵育时间来维持纳米颗粒的稳定性。通过检测来自GFP质粒的荧光信号并随后通过转染GFP siRNA沉默该信号来证实转染成功。Western印迹分析显示,在用20nM的siRNA_5转染后,ATP13A2蛋白表达显著降低至20%。成功建立了ATP13A2缺陷型帕金森病模型。
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引用次数: 0
Lesson From Covid19 Outbreak And Its Impact: A Generalized Study covid - 19疫情的教训及其影响:一项广义研究
Q3 Medicine Pub Date : 2021-03-09 DOI: 10.2174/1574362416666210309154336
Sakshi Gupta, K. Veer
An infectious disease enumerated in Wuhan, China in December 2019, and then exported in many countries across world called Coronavirus disease 2019. It is also named by COVID-19. COVID-19 is an ongoing pandemic 60.2 Million confirmed cases, which is a leading health concern for public across the world, where mainly middle and old age people are hospitalized and dead across the affected countries. Where more than 1.42 Million people have deceased and More than 41.5 Million people have been recovered. Almost all the countries are fighting against the transmission of the virus by restricting transportation and other daily life activities. Coronavirus outbreak causes many psychological disorders, such as, fear of infection and dying. On the other hand, COVID-19 results some positive consequences on environment due to restricted human activities. Environmental conditions including air quality, global warming, water quality, change of biodiversity and ecosystem and many more parameters are shows a significant improvement in meteorological graph. Overall environmental pollution is reduced and earth is healing itself.
2019年12月在中国武汉列举的一种传染病,然后出口到世界许多国家,称为2019冠状病毒病。它也以COVID-19命名。COVID-19是一场持续的大流行,确诊病例达6020万例,是世界各地公众的主要健康问题,在受影响的国家,主要是中老年人住院和死亡。死亡人数超过142万人,康复人数超过4150万人。几乎所有国家都在通过限制交通和其他日常生活活动来抗击病毒的传播。冠状病毒的爆发导致许多心理障碍,如害怕感染和死亡。另一方面,由于人类活动受到限制,新冠肺炎对环境产生了一些积极影响。环境条件包括空气质量、全球变暖、水质、生物多样性和生态系统的变化等许多参数在气象图上都显示出显著的改善。整体环境污染减少,地球正在自我修复。
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引用次数: 0
Therapeutic Approaches for COVID-19 Based on the Interferon-mediated Immune Responses 基于干扰素介导免疫应答的COVID-19治疗方法
Q3 Medicine Pub Date : 2021-01-20 DOI: 10.2174/1574362416666210120104636
P. Mosaddeghi, F. Shahabinezhad, Z. Dehghani, Mitra Farahmandnejad, M. Taghipour, M. Moghadami, Navid Nezafat, S. Masoompour, M. Negahdaripour
As the outbreak of COVID-19 has accelerated, an urgent need for finding strategies to combat thevirus is growing. Thus, gaining more knowledge on the pathogenicity mechanism of SARS-CoV-2, the causing agent ofCOVID-19, and its interaction with the immune system is of utmost importance. Although this novel virus is not well knownyet, its structural and genetic similarity with SARS-CoV as well as the comparable pattern of age-mortality relations suggestthat some previous findings on SARS could be applicable for COVID-19. The aim of this study was to investigate the most important signaling pathways activated by coronaviruses tobetter understand the viral pathogenesis and host immune responses. Here, a systems biology study was conducted on a SARS database. It was followed by a literature review on thecognate subject. It was proved that interferons may possess a crucial role in the defense against coronavirus diseases. The literaturesupported the validity of the employed approach and the notion that interferon induction could play a key role in the bodydefense against coronavirus infections. Altogether, administration of interferons or interferon-inducing agents in a prophylactic manner or at earlystages of the disease, could mimic the effective antiviral responses against SARS-CoV-2 and reduce the disease severity.At later stages of the disease, however, the balance of the immune reactions would be disrupted and the responses wouldshift toward immunopathogenic over-reactions, which could be exacerbated by interferon usage. Moderating the activity ofthe immune system by anti-inflammatory agents, might be the optimum approach in such conditions.
随着COVID-19疫情的加速爆发,迫切需要找到对抗该病毒的战略。因此,进一步了解covid -19的致病因子SARS-CoV-2的致病机制及其与免疫系统的相互作用至关重要。尽管这种新型病毒尚不清楚,但它与SARS- cov的结构和遗传相似性以及年龄-死亡率关系的可比较模式表明,以前关于SARS的一些发现可能适用于COVID-19。本研究的目的是研究冠状病毒激活的最重要的信号通路,以更好地了解病毒的发病机制和宿主的免疫反应。在这里,对SARS数据库进行了系统生物学研究。接着是对相关主题的文献综述。事实证明,干扰素在防御冠状病毒疾病中可能具有至关重要的作用。这些文献支持了所采用方法的有效性,以及干扰素诱导可能在人体防御冠状病毒感染中发挥关键作用的观点。总之,以预防方式或在疾病的早期阶段给予干扰素或干扰素诱导剂,可以模拟针对SARS-CoV-2的有效抗病毒反应,并降低疾病的严重程度。然而,在疾病的后期阶段,免疫反应的平衡将被破坏,反应将转向免疫致病性过度反应,这可能会因使用干扰素而加剧。在这种情况下,通过抗炎剂调节免疫系统的活性可能是最佳的方法。
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引用次数: 15
Impact of Corona virus Outbreak on Climate and air Quality 冠状病毒爆发对气候和空气质量的影响
Q3 Medicine Pub Date : 2021-01-20 DOI: 10.2174/1574362416666210120103124
Nikita Jatai, Tanu Sharma, K. Veer
All over the world, there is a new target of public health emergency looming the world along with an appearance and distribution of the novel coronavirus disease (2019-nCoV) also known as Severe Acute Respiratory Syndrome coronavirus 2 (SARS-CoV-2). This Virus initially generated in bats and then after transferred to a human being over unknown animal playing the role of mediator in Wuhan, China in December 2019. This virus is passed by breathing or in contact with an infected person’s droplets. The Incubation period is between 2 to 14 days for COVID-19, that is the time between exposure of the virus (person becoming infected) and symptom on that person, is on an average of 5-6 days, however it can goes up to 14 days. Throughout this period, which can be also known as “pre-symptomatic” period, some of the infected patients or persons can be contagious. That is why, transferal from a pre-symptomatic case can happen before the symptoms onset. Where there is few number of case studies and reports, pre-symptomatic transferal has been documented via contact with someone who is diagnosed with virus and increase investigation of that particular clusters of total confirmed cases. The main problem is that the symptoms are just like the regular flu that are cough, fever, sore throat, fatigue and breathlessness. This virus is moderate or mild in most of the people, but in elder ones, it may proceed to pneumonia, multi-organ dysfunction and Acute Respiratory Distress Syndrome (ARDS). Coronavirus has significant consequences on the Health system, mainly on cardiovascular diseases and on the environment.
在世界范围内,随着新型冠状病毒病(2019-nCoV)也被称为严重急性呼吸系统综合征冠状病毒2 (SARS-CoV-2)的出现和分布,新的突发公共卫生事件的目标迫在眉睫。该病毒最初在蝙蝠中产生,然后于2019年12月在中国武汉通过未知动物转移到人类身上,发挥了媒介作用。这种病毒通过呼吸或接触感染者的飞沫传播。COVID-19的潜伏期为2至14天,即接触病毒(人被感染)和该人出现症状之间的时间,平均为5-6天,但最长可达14天。在这段时间内,也可称为“症状前”时期,一些受感染的病人或人可能具有传染性。这就是为什么症状前病例的转移可能发生在症状出现之前。在病例研究和报告数量较少的地方,通过与被诊断为病毒的人接触记录了症状前转移,并加强了对总确诊病例中特定聚集性病例的调查。主要的问题是,它的症状和普通流感一样,都是咳嗽、发烧、喉咙痛、疲劳和呼吸困难。这种病毒在大多数人中是中度或轻度的,但在老年人中,它可能会发展为肺炎、多器官功能障碍和急性呼吸窘迫综合征(ARDS)。冠状病毒对卫生系统,主要是心血管疾病和环境产生重大影响。
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引用次数: 0
Meet Our Editorial Board Member 见见我们的编辑委员会成员
Q3 Medicine Pub Date : 2021-01-15 DOI: 10.2174/157436241503201221154749
J. Dorszewska
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引用次数: 0
Gradient Ascent Optimization for Fault Detection in Electrical Power Systems based on Wavelet Transformation 基于小波变换的梯度上升优化电力系统故障检测
Q3 Medicine Pub Date : 2021-01-15 DOI: 10.2174/1574362414666190619092910
Iyappan Murugesan and Karpagam Sathish
This paper presents electrical power system comprises many complex and interrelatingelements that are susceptible to the disturbance or electrical fault. The faults in electricalpower system transmission line (TL) are detected and classified. But, the existing techniques like ArtificialNeural Network (ANN) failed to improve the Fault Detection (FD) performance during transmissionand distribution. In order to reduce the Power Loss Rate (PLR), Daubechies Wavelet Transformbased Gradient Ascent Deep Neural Learning (DWT-GADNL) Technique is introduced for FDin electricalpower sub-station. DWT-GADNL Technique comprises three step, normalization, feature extractionand FD through optimization. Initially sample power TL signal is taken. After that in first step,min-max normalization process is carried out to estimate the various rated values of transmission lines.Then in second step, Daubechies Wavelet Transform (DWT) is employed for decomposition of normalizedTL signal to different components for feature extraction with higher accuracy. Finally in third step,Gradient Ascent Deep Neural Learning is an optimization process for detecting the local maximum (i.e.,fault) from the extracted values with help of error function and weight value. When maximum errorwith low weight value is identified, the fault is detected with lesser time consumption. DWT-GADNLTechnique is measured with PLR, Feature Extraction Accuracy (FEA), and Fault Detection Time(FDT). The simulation result shows that DWT-GADNL Technique is able to improve the performanceof FEA and reduces FDT and PLR during the transmission and distribution when compared to state-ofthe-art works.An electric power system incorporates production, broadcast and distributionof electric energy. To send the electric power to massive load centers, transmission lines are exploited.The fast growth of electric power systems results in huge number of lines in operation and total length.TL are susceptible to faults in case of lightning, short circuits, mis-operation, human errors, overload, etc.Faults resulted in tiny to long power outages for customers. To protect the reliable power system operations,Fault identification, isolation and localization are imperative. The voltage lessened to minimal value,when fault occurs on TL. FD is an essential problem in power system engineering to minimize the PLR.DWT-GADNL Technique is introduced for FD in TL during transmission and distribution.Power Loss due to the fault occurrence during the transmission and distribution is a commonproblem in electrical power system. To lessen the PLR, the fault is detected in earlier stage. From thesample transmission line, the features are extracted and the values are calculated. When the observedvalue is lesser than the actual value, the fault is detected through performing the gradient ascent optimizationprocess in transmission line. In this optimization process, the local maxima are identified to reduceth
本文介绍了电力系统由许多复杂的相互关联的元件组成,这些元件容易受到干扰或电气故障的影响。对电力系统输电线路故障进行了检测和分类。但是,现有的人工神经网络(ANN)技术未能提高传输和分配过程中的故障检测(FD)性能。为了降低功率损耗率(PLR),将基于Daubechies小波变换的梯度上升深度神经学习(DWT-GADNL)技术引入到FDin电力变电站中。DWT-GADNL技术包括归一化、特征提取和优化FD三个步骤。最初采样功率TL信号。然后在第一步中,进行最小-最大归一化过程来估计输电线路的各种额定值。然后在第二步中,采用Daubechies小波变换(DWT)将归一化的TL信号分解为不同的分量,以进行更高精度的特征提取。最后在第三步中,梯度上升深度神经学习是一个优化过程,用于借助误差函数和权值从提取的值中检测局部最大值(即故障)。当识别出具有低权重值的最大错误时,可以用较小的时间消耗来检测故障。利用PLR、特征提取精度(FEA)和故障检测时间(FDT)对DWT GADNL技术进行了测量。仿真结果表明,与现有技术相比,DWT-GADNL技术能够提高有限元分析的性能,并降低传输和分配过程中的FDT和PLR。电力系统包括电能的生产、广播和分配。为了将电力输送到大规模的负荷中心,输电线路被利用。电力系统的快速增长导致了大量的线路在运营和总长度。TL在闪电、短路、误操作、人为错误、过载等情况下容易发生故障。故障会导致客户小到长时间停电。为了保护电力系统的可靠运行,故障识别、隔离和定位势在必行。TL发生故障时,电压降到最小值。FD是电力系统工程中的一个重要问题,以最大限度地减少PLR.DWT-GADNL技术是在输电和配电过程中为TL中的FD引入的。输电和配电过程中发生的故障造成的电力损失是电力系统中的一个常见问题。为了减少PLR,在早期阶段检测到故障。从采样传输线中提取特征并计算值。当观测值小于实际值时,通过在输电线路中进行梯度上升优化过程来检测故障。在这个优化过程中,识别局部最大值以减少PLR。在不同的时间实例中,PLR会发生变化。在实例3中,所提出的DWTGADNL框架的PLR为12%,其中基于模糊逻辑的算法和故障诊断框架的PL率分别为27%和19%。通过对10个实例的比较,GWMD-DE技术的PLR分别比现有技术降低了59%和40%。DWT-GADNL技术是在具有最小PLR的传输和分配过程中为FD引入的。采样功率TL信号,最小-最大归一化过程执行输电线路的各种额定值估计。DWT将归一化TL信号分解为不同的分量,用于更高精度的特征提取。梯度上升深度神经学习借助误差函数和权值从提取的值中检测局部最大值。当识别出权重值较低的最大值时,故障检测的时间消耗较小。用PLR、FEA和FDT等指标对DWT-GADNL技术的性能进行了测试。通过对所有技术进行的模拟,所提出的DWT-GADNL技术在传输和分配过程中对FD表现出了更好的性能,这与最先进的工作相比较。从仿真结果来看,DWT-GADNL技术比现有方法减少了50%的PLR,并提高了9%的有限元分析能力。
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引用次数: 3
On Graph theoretic index of Complementary Benzenoids And Macromolecules 互补类苯和大分子的图论指标
Q3 Medicine Pub Date : 2021-01-15 DOI: 10.2174/1574362414666181226154935
J. Senbagamalar
A topological index of a graph G is a numerical parameter related to Gwhich characterizes its molecular topology. In the field of QSAR and QSPR research, theoreticalproperties of the chemical compounds and their molecular topological indices such as distanceconnectivity indices and degree connectivity indices are used to predict the bioactivity of differentmolecular compounds.Such an approach is different from the traditional QSAR methodology,where one employs selected simpler physico-chemical properties to predict biological activities ofmolecules. In order to obtain the structure-activity relationships in which theoretical and computationalmethods are necessary to find appropriate representations of the molecular structure ofchemical compounds. These representations are realized through the molecular descriptors. Moleculardescriptors are numbers containing structural information derived from the structural representationused for molecules under study.A topological index defined on molecular structure G can be considered as a real valuedfunctionf :G→ R+ which maps each durg molecular structure to certain real numbers. Graphenesheets are composed of carbon atoms linked in hexagonal shapes with each carbon atom covalentlybonded to three other carbon atoms. Each sheet of graphene is only one atom thick and eachgraphene sheet is considered a single molecule. Graphene has the same structure of carbon atomslinked in hexagonal shapes to form carbon nanotubes, but graphene is flat rather than cylindrical..This paper addresses the problem of computing the Wiener , First Zagreb index and Forgotten indexof Complementary graphs of graphene sheets, triangular benzenoid graph, circumcoronenemolecular graph and nanostar dendrimers.The line graphs were used for modeling amino acid sequences of proteins and of thegenetic code. The connected graphs are isomorphic to self complementary graphs. Recently, moleculargraphs have proved to be highly useful for drugs activity. Non empirical parameters ofchemical structures derived from graph theoretic formalisms are being widely used by many researchersin studies pertaining to molecular design, pharmaceutical drug-design, and environmentalhazard assessment of chemicals.
图G的拓扑指数是与图G有关的表征其分子拓扑结构的数值参数。在QSAR和QSPR研究领域,利用化合物的理论性质及其分子拓扑指标如距离连通性指数和度连通性指数来预测不同分子化合物的生物活性。这种方法与传统的QSAR方法不同,传统的QSAR方法采用选择的更简单的物理化学性质来预测分子的生物活性。为了获得结构-活性关系,需要理论和计算方法来找到化合物分子结构的适当表示。这些表示是通过分子描述符实现的。分子描述符是包含结构信息的数字,来源于所研究分子的结构表示。在分子结构G上定义的拓扑指数可以看作是一个实值函数G→R+,它将每个药物分子结构映射到一定的实数。石墨烯片由六边形连接的碳原子组成,每个碳原子与另外三个碳原子共价连接。每片石墨烯只有一个原子厚,每片石墨烯被认为是一个分子。石墨烯具有与碳原子相同的六角形结构,但它是扁平的而不是圆柱形的。本文解决了石墨烯片互补图、三角形苯类图、环冠分子图和纳米星树状大分子图的Wiener指数、First Zagreb指数和Forgotten指数的计算问题。线形图用于模拟蛋白质和遗传密码的氨基酸序列。连通图与自补图同构。近年来,分子图谱已被证明是非常有用的药物活性。由图论形式导出的化学结构的非经验参数被许多研究人员广泛应用于与分子设计、药物设计和化学品环境危害评估有关的研究中。
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引用次数: 2
Sliding Mode Control of an Actuated Knee Joint Orthosis 膝关节矫形器的滑模控制
Q3 Medicine Pub Date : 2021-01-04 DOI: 10.2174/1574362415999210104223820
Imen Saidi, A. Hammami
In this paper, a robust sliding mode controller is developed to control an orthosis used for rehabilitation of lower limb.The orthosis is defined as a mechanical device intended to physically assist a human subject for the realization of his movements. It should be adapted to the human morphology, interacting in harmony with its movements, and providing the necessary efforts along the limbs to which it is attached.The application of the sliding mode control to the Shank-orthosis system shows satisfactory dynamic response and tracking performances.In fact, position tracking and speed tracking errors are very small. The sliding mode controller effectively absorbs disturbance and parametric variations, hence the efficiency and robustness of our applied control.
本文开发了一种鲁棒滑模控制器来控制用于下肢康复的矫形器。矫形器被定义为一种机械装置,旨在物理地帮助人类主体实现其运动。它应该适应人类的形态,与它的运动和谐互动,并沿着它所附着的四肢提供必要的努力。滑模控制在Shank矫形器系统中的应用显示出令人满意的动态响应和跟踪性能。事实上,位置跟踪和速度跟踪误差非常小。滑模控制器有效地吸收了扰动和参数变化,从而提高了应用控制的效率和鲁棒性。
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引用次数: 1
Impact of Covid19 and its Treatment: a Report 2019冠状病毒病的影响及其治疗:报告
Q3 Medicine Pub Date : 2020-12-23 DOI: 10.2174/1574362415999201223090332
K. Veer, Tanu Sharma
Till now, across from a few basic data, nothing is well clear regarding its exact origin, incubation period,seriousness and what makes it transmissible is not recommended for COVID19 anywhere in the world. It was on 28January that the World Health Organisation released a paper relating to medical data and recommendations from themanagement of previous HCoV epidemics. The present paper outlines steps for the identification and assessment ofpatients with extreme acute respiratory disease; monitoring and infection prevention strategies; tracking and earlyintervention therapy; treatment of respiratory arrest and ARDS; clinical diagnosis; recommendations for septic shockmanagement; therapies; and concerns for pregnant women.
到目前为止,除了一些基本数据外,关于它的确切起源、潜伏期、严重性以及它的传播原因,还没有什么明确的信息。世界上任何地方都不建议使用新冠病毒19。1月28日,世界卫生组织发布了一篇关于医疗数据和以往HCoV疫情管理建议的论文。本文概述了识别和评估极端急性呼吸系统疾病患者的步骤;监测和感染预防战略;追踪和早期干预治疗;呼吸停止和ARDS的治疗;临床诊断;感染性休克管理建议;疗法;以及对孕妇的关切。
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引用次数: 0
Combination of Pattern Classifiers Based on Naive Bayes and Fuzzy Integral Method for Biological Signal Applications 基于朴素贝叶斯和模糊积分的模式分类器组合在生物信号中的应用
Q3 Medicine Pub Date : 2020-12-01 DOI: 10.2174/1574362414666190320163953
O. Akbarzadeh, M. Khosravi, Mehdi Shadloo-Jahromi
Achieving the best possible classification accuracy is the main purpose ofeach pattern recognition scheme. An interesting area of classifier design is to design for biomedicalsignal and image processing.In the current work, in order to increase recognition accuracy, a theoreticalframe for combination of classifiers is developed. This method uses different pattern representationsto show that a wide range of existing algorithms could be incorporated as the particularcases of compound classification where all the pattern representations are used jointly to make anaccurate decision.The results show that the combination rules developed under the Naive Bayes and Fuzzyintegral method outperforms other classifier combination schemes.The performance of different combination schemes has been studied through an experimentalcomparison of different classifier combination plans. The dataset used in the article hasbeen obtained from biological signals.
实现最好的分类精度是每个模式识别方案的主要目的。针对生物医学信号和图像处理的分类器设计是分类器设计的一个有趣领域。在目前的工作中,为了提高识别精度,提出了一种分类器组合的理论框架。该方法使用不同的模式表示,表明可以将广泛的现有算法作为复合分类的特殊情况,其中所有模式表示被联合使用以做出不准确的决策。结果表明,在朴素贝叶斯和模糊积分方法下开发的组合规则优于其他分类器组合方案。通过对不同分类器组合方案的实验比较,研究了不同组合方案的性能。本文使用的数据集来源于生物信号。
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引用次数: 8
期刊
Current Signal Transduction Therapy
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