首页 > 最新文献

Environmental Biology of Fishes最新文献

英文 中文
Population density and zooplankton biomass influence anadromous juvenile river herring growth in freshwater lakes 种群密度和浮游动物生物量对淡水湖中溯河幼鱼生长的影响
IF 1.4 4区 环境科学与生态学 Q3 ECOLOGY Pub Date : 2024-07-02 DOI: 10.1007/s10641-024-01565-8
Matthew T. Devine, Steven Bittner, Allison H. Roy, Benjamin I. Gahagan, Michael P. Armstrong, Adrian Jordaan

Anadromous river herring populations, collectively alewife (Alosa pseudoharengus) and blueback herring (Alosa aestivalis), have experienced a multi-century decline in abundance and distribution. These declines have been attributed in part to anthropogenic threats in freshwater ecosystems (e.g., habitat fragmentation, overharvest, water pollution, watershed development). An understanding of variability in juvenile productivity and growth is critical to developing restoration approaches. We characterized variability in juvenile river herring growth among 11 freshwater lakes in the northeastern USA. We used age estimates from otoliths and length measurements to calculate growth rates of juvenile river herring (n = 1452). We tested the effects of juvenile river herring densities, zooplankton (biomass and size), habitat area (based on thermocline depth), and water quality (temperature, nutrients, chlorophyll a) on juvenile growth. Mean monthly growth rates ranged from 0.56 to 1.41 mm/d and typically increased throughout the summer. Increased juvenile growth was best predicted by lower juvenile density (β = − 0.104, P < 0.001) and higher zooplankton biomass (β = 0.032, P < 0.05). Combined with information about juvenile densities and mortality, these results broaden the understanding of anadromous juvenile river herring productivity, provide information that can contribute to refining stock assessment and life cycle models, and help to better understand the potential impacts of habitat conservation and restoration decisions.

溯河鲱鱼种群,包括金目鲱鱼(Alosa pseudoharengus)和蓝背鲱鱼(Alosa aestivalis),经历了一个多世纪的数量和分布下降。这些衰退部分归因于淡水生态系统中的人为威胁(如栖息地破碎化、过度捕捞、水污染、流域开发)。了解幼鱼生产力和生长的变化对制定恢复方法至关重要。我们描述了美国东北部 11 个淡水湖泊中河鲱幼鱼生长的变异性。我们利用耳石和长度测量来估算年龄,从而计算出河鲱幼鱼(n = 1452)的生长率。我们测试了河鲱幼鱼密度、浮游动物(生物量和大小)、栖息地面积(基于温跃层深度)和水质(温度、营养物质、叶绿素 a)对幼鱼生长的影响。月平均生长率从 0.56 到 1.41 毫米/天不等,通常在整个夏季都在增长。较低的幼体密度(β = - 0.104,P < 0.001)和较高的浮游动物生物量(β = 0.032,P < 0.05)最能预测幼体生长速度的提高。结合有关幼鱼密度和死亡率的信息,这些结果拓宽了对溯河幼鱼生产力的认识,提供了有助于完善种群评估和生命周期模型的信息,并有助于更好地理解生境保护和恢复决策的潜在影响。
{"title":"Population density and zooplankton biomass influence anadromous juvenile river herring growth in freshwater lakes","authors":"Matthew T. Devine, Steven Bittner, Allison H. Roy, Benjamin I. Gahagan, Michael P. Armstrong, Adrian Jordaan","doi":"10.1007/s10641-024-01565-8","DOIUrl":"https://doi.org/10.1007/s10641-024-01565-8","url":null,"abstract":"<p>Anadromous river herring populations, collectively alewife (<i>Alosa pseudoharengus</i>) and blueback herring (<i>Alosa aestivalis</i>), have experienced a multi-century decline in abundance and distribution. These declines have been attributed in part to anthropogenic threats in freshwater ecosystems (e.g., habitat fragmentation, overharvest, water pollution, watershed development). An understanding of variability in juvenile productivity and growth is critical to developing restoration approaches. We characterized variability in juvenile river herring growth among 11 freshwater lakes in the northeastern USA. We used age estimates from otoliths and length measurements to calculate growth rates of juvenile river herring (<i>n</i> = 1452). We tested the effects of juvenile river herring densities, zooplankton (biomass and size), habitat area (based on thermocline depth), and water quality (temperature, nutrients, chlorophyll <i>a</i>) on juvenile growth. Mean monthly growth rates ranged from 0.56 to 1.41 mm/d and typically increased throughout the summer. Increased juvenile growth was best predicted by lower juvenile density (<i>β</i> = − 0.104, <i>P</i> &lt; 0.001) and higher zooplankton biomass (<i>β</i> = 0.032, <i>P</i> &lt; 0.05). Combined with information about juvenile densities and mortality, these results broaden the understanding of anadromous juvenile river herring productivity, provide information that can contribute to refining stock assessment and life cycle models, and help to better understand the potential impacts of habitat conservation and restoration decisions.</p>","PeriodicalId":11799,"journal":{"name":"Environmental Biology of Fishes","volume":null,"pages":null},"PeriodicalIF":1.4,"publicationDate":"2024-07-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141525891","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Brain form and foraging behaviour in a stream fish 溪流鱼类的大脑形态和觅食行为
IF 1.4 4区 环境科学与生态学 Q3 ECOLOGY Pub Date : 2024-06-29 DOI: 10.1007/s10641-024-01567-6
Pria N. Mahabir, Caraline Billotte, Marie K. Gutgesell, Matthew M. Guzzo, Kevin S. McCann, Nicholas J. Bernier, Frédéric Laberge

Brain form (i.e., brain size and morphology) has been linked to variation in foraging behaviour among species of fishes in lakes and oceans, such as larger brains associated with fish foraging higher in the food chain. However, much less is known about these relationships across habitats, or in stream fishes. Therefore, we explore relationships between foraging behaviour and brain form in the omnivorous creek chub (Semotilus atromaculatus) across different streams of Southwest Ontario, Canada. We assessed foraging behaviour variables (i.e., trophic position, proportion of terrestrial energy in diet and foraging flexibility on aquatic and terrestrial resources) against brain form (i.e., relative brain size and the proportional size of the cerebellum, hypothalamus, olfactory bulbs, optic tectum, and telencephalon). Principal component analysis was used to extract covariation patterns among the size of brain regions. We found that creek chub brain size is positively associated with trophic position and proportion of terrestrial energy in diet, but not foraging flexibility. The first principal component, explaining 91% of size covariation among brain regions, was also positively associated with trophic position but not with proportion of terrestrial energy in diet suggesting that brain regions outside of those measured contribute to the association between brain size and proportion of terrestrial energy in diet. Our results suggest that a relationship between brain size and trophic position may be common among fishes, and that foraging on resources from the terrestrial energetic pathway in streams may present a novel, yet to be characterized cognitive challenge for fish.

脑的形态(即脑的大小和形态)与湖泊和海洋中鱼类物种之间觅食行为的变化有关,例如较大的脑与鱼类在食物链中觅食的位置较高有关。然而,人们对不同栖息地或溪流鱼类的这些关系知之甚少。因此,我们探讨了加拿大安大略省西南部不同溪流中杂食性溪鲢(Semotilus atromaculatus)的觅食行为与大脑形态之间的关系。我们评估了觅食行为变量(即营养位置、食物中陆地能量的比例以及对水生和陆地资源的觅食灵活性)与脑形态(即相对脑大小以及小脑、下丘脑、嗅球、视神经和端脑的比例大小)之间的关系。主成分分析用于提取脑区大小之间的共变模式。我们发现,溪鲢的脑部大小与营养位置和食物中陆地能量的比例呈正相关,但与觅食的灵活性无关。第一主成分解释了91%的脑区大小协变,它与营养位置也呈正相关,但与食物中陆地能量的比例无关,这表明所测量的脑区以外的脑区也对脑区大小与食物中陆地能量的比例之间的关系做出了贡献。我们的研究结果表明,脑大小与营养位置之间的关系在鱼类中可能很常见,在溪流中觅食陆地能量途径的资源可能会给鱼类带来一种新的认知挑战,但这种挑战的特征尚不清楚。
{"title":"Brain form and foraging behaviour in a stream fish","authors":"Pria N. Mahabir, Caraline Billotte, Marie K. Gutgesell, Matthew M. Guzzo, Kevin S. McCann, Nicholas J. Bernier, Frédéric Laberge","doi":"10.1007/s10641-024-01567-6","DOIUrl":"https://doi.org/10.1007/s10641-024-01567-6","url":null,"abstract":"<p>Brain form (i.e., brain size and morphology) has been linked to variation in foraging behaviour among species of fishes in lakes and oceans, such as larger brains associated with fish foraging higher in the food chain. However, much less is known about these relationships across habitats, or in stream fishes. Therefore, we explore relationships between foraging behaviour and brain form in the omnivorous creek chub (<i>Semotilus atromaculatus</i>) across different streams of Southwest Ontario, Canada. We assessed foraging behaviour variables (i.e., trophic position, proportion of terrestrial energy in diet and foraging flexibility on aquatic and terrestrial resources) against brain form (i.e., relative brain size and the proportional size of the cerebellum, hypothalamus, olfactory bulbs, optic tectum, and telencephalon). Principal component analysis was used to extract covariation patterns among the size of brain regions. We found that creek chub brain size is positively associated with trophic position and proportion of terrestrial energy in diet, but not foraging flexibility. The first principal component, explaining 91% of size covariation among brain regions, was also positively associated with trophic position but not with proportion of terrestrial energy in diet suggesting that brain regions outside of those measured contribute to the association between brain size and proportion of terrestrial energy in diet. Our results suggest that a relationship between brain size and trophic position may be common among fishes, and that foraging on resources from the terrestrial energetic pathway in streams may present a novel, yet to be characterized cognitive challenge for fish.</p>","PeriodicalId":11799,"journal":{"name":"Environmental Biology of Fishes","volume":null,"pages":null},"PeriodicalIF":1.4,"publicationDate":"2024-06-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141529861","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evidence of reproductive and feeding habitat for manta rays off Florida’s Atlantic coast 佛罗里达大西洋沿岸蝠鲼繁殖和觅食栖息地的证据
IF 1.4 4区 环境科学与生态学 Q3 ECOLOGY Pub Date : 2024-06-26 DOI: 10.1007/s10641-024-01566-7
Jessica Pate

Manta rays Mobula cf. birostris aggregate off the Atlantic coast of Florida each spring, typically March through May. Eighteen courtship events were documented and four zooplankton samples collected opportunistically during boat-based and aerial surveys in 2021–2024. Eighty-three percent of courtship events involved only two individuals, and four stages courtship (initiation, endurance, evasion, pre-copulation positioning) were observed. Breaching events were observed on every day, except one, that courtship events were documented by boat survey. All zooplankton samples were dominated by copepods with bivalve larvae, chaetognaths, and echinoderm larvae also being abundant. Zooplankton biomass ranged from 23.9 to 39.6 mg m−3. These are the first published records of courtship in Mobula cf. birostris, as well as the first insights into its target surface prey. Identifying potential manta ray critical habitat, such as feeding and reproductive areas, especially in data-deficient regions such as the western Atlantic, is a necessary step for conservation.

蝠鲼(Mobula cf. birostris)每年春季在佛罗里达州大西洋沿岸聚集,通常从三月到五月。在 2021-2024 年的乘船和空中调查中,记录了 18 次求偶事件,并随机收集了 4 份浮游动物样本。83%的求偶事件仅涉及两个个体,观察到四个求偶阶段(开始、持续、回避、种群前定位)。除了有一天通过船只调查记录到求偶事件外,每天都能观察到破冰事件。所有浮游动物样本均以桡足类为主,双壳类幼体、链足类和棘皮动物幼体也很丰富。浮游动物的生物量从 23.9 毫克/立方米到 39.6 毫克/立方米不等。这是首次公开发表的蝠鲼求偶记录,也是对其目标海面猎物的首次深入了解。确定蝠鲼潜在的关键栖息地,如觅食区和繁殖区,尤其是在数据缺乏的地区,如大西洋西部,是保护蝠鲼的必要步骤。
{"title":"Evidence of reproductive and feeding habitat for manta rays off Florida’s Atlantic coast","authors":"Jessica Pate","doi":"10.1007/s10641-024-01566-7","DOIUrl":"https://doi.org/10.1007/s10641-024-01566-7","url":null,"abstract":"<p>Manta rays <i>Mobula</i> cf<i>. birostris</i> aggregate off the Atlantic coast of Florida each spring, typically March through May. Eighteen courtship events were documented and four zooplankton samples collected opportunistically during boat-based and aerial surveys in 2021–2024. Eighty-three percent of courtship events involved only two individuals, and four stages courtship (initiation, endurance, evasion, pre-copulation positioning) were observed. Breaching events were observed on every day, except one, that courtship events were documented by boat survey. All zooplankton samples were dominated by copepods with bivalve larvae, chaetognaths, and echinoderm larvae also being abundant. Zooplankton biomass ranged from 23.9 to 39.6 mg m<sup>−3</sup>. These are the first published records of courtship in <i>Mobula</i> cf. <i>birostris</i>, as well as the first insights into its target surface prey. Identifying potential manta ray critical habitat, such as feeding and reproductive areas, especially in data-deficient regions such as the western Atlantic, is a necessary step for conservation.</p>","PeriodicalId":11799,"journal":{"name":"Environmental Biology of Fishes","volume":null,"pages":null},"PeriodicalIF":1.4,"publicationDate":"2024-06-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141529862","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Diet of age-0 tarpon Megalops atlanticus near their northern range limit in the western Atlantic Ocean 大西洋西部 0 龄鲢 Megalops atlanticus 在其北部分布极限附近的食谱
IF 1.4 4区 环境科学与生态学 Q3 ECOLOGY Pub Date : 2024-06-20 DOI: 10.1007/s10641-024-01563-w
Marvin M. Mace, Derek P. Crane, Matthew E. Kimball, Juliana M. Harding, Justin McNabb

The Atlantic tarpon Megalops atlanticus is a tropical-subtropical fish that occupies mangrove and salt marsh habitats during the first year of life. Diet during the first few months of life can have substantial effects on growth and survival of fishes. The purpose of our study was to examine the diet of age-0 tarpon in the North Inlet-Winyah Bay estuarine system, located near the northern extent of their distribution in the western Atlantic Ocean. We examined stomach contents to characterize tarpon diet and relate tarpon feeding to water temperature. The most important prey items based on the frequency of occurrence and proportion by weight indices were small fishes and crustaceans, whereas copepods were the most important prey based on the proportion by number index. Small age-0 tarpon ((le) 100 mm) consumed small crustaceans (copepods) while large age-0 tarpon (> 100 mm) consumed larger crustaceans (shrimp) and age-0 tarpon of all sizes consumed fish. Most tarpon with empty stomachs were collected at temperatures < 25 °C, whereas most tarpon with prey in their stomach were collected at temperatures > 25 °C. The proportion of tarpon having at least one prey item in their stomach contents was greatest around 28 °C and declined at lower and higher water temperatures. Salt marsh habitats in the North Inlet-Winyah Bay estuarine system provide suitable food resources for age-0 tarpon. As water temperatures increase and tropical species, such as tarpon, expand their range, these coastal nursery habitats may become more important for tarpon growth and recruitment to the spawning stock.

大西洋鲢 Megalops atlanticus 是一种热带-亚热带鱼类,在出生后的第一年会占据红树林和盐沼栖息地。出生后头几个月的饮食会对鱼类的生长和存活产生重大影响。我们的研究旨在考察北英莱特-温雅湾河口系统中 0 龄鲢鱼的饮食情况,该系统位于大西洋西部鲢鱼分布的北部附近。我们检查了胃内容物,以确定白鲢的食性,并将白鲢的摄食与水温联系起来。根据出现频率和重量比例指数,最重要的猎物是小型鱼类和甲壳类,而根据数量比例指数,桡足类是最重要的猎物。小的0龄鲢鱼(100毫米)捕食小型甲壳类(桡足类),而大的0龄鲢鱼(100毫米)捕食较大的甲壳类(虾),各种大小的0龄鲢鱼都捕食鱼类。大多数空胃的白鲢是在温度为 25 °C时采集的,而大多数胃中有猎物的白鲢是在温度为 25 °C时采集的。胃内容物中至少含有一种猎物的白鲢比例在 28 °C左右最高,在较低和较高水温下均有所下降。北因莱特-温雅湾河口系统的盐沼生境为0龄鲢鱼提供了合适的食物资源。随着水温的升高和热带物种(如鲢鱼)活动范围的扩大,这些沿岸育苗生境对鲢鱼的生长和产卵种群的招募可能会变得更加重要。
{"title":"Diet of age-0 tarpon Megalops atlanticus near their northern range limit in the western Atlantic Ocean","authors":"Marvin M. Mace, Derek P. Crane, Matthew E. Kimball, Juliana M. Harding, Justin McNabb","doi":"10.1007/s10641-024-01563-w","DOIUrl":"https://doi.org/10.1007/s10641-024-01563-w","url":null,"abstract":"<p>The Atlantic tarpon <i>Megalops atlanticus</i> is a tropical-subtropical fish that occupies mangrove and salt marsh habitats during the first year of life. Diet during the first few months of life can have substantial effects on growth and survival of fishes. The purpose of our study was to examine the diet of age-0 tarpon in the North Inlet-Winyah Bay estuarine system, located near the northern extent of their distribution in the western Atlantic Ocean. We examined stomach contents to characterize tarpon diet and relate tarpon feeding to water temperature. The most important prey items based on the frequency of occurrence and proportion by weight indices were small fishes and crustaceans, whereas copepods were the most important prey based on the proportion by number index. Small age-0 tarpon (<span>(le)</span> 100 mm) consumed small crustaceans (copepods) while large age-0 tarpon (&gt; 100 mm) consumed larger crustaceans (shrimp) and age-0 tarpon of all sizes consumed fish. Most tarpon with empty stomachs were collected at temperatures &lt; 25 °C, whereas most tarpon with prey in their stomach were collected at temperatures &gt; 25 °C. The proportion of tarpon having at least one prey item in their stomach contents was greatest around 28 °C and declined at lower and higher water temperatures. Salt marsh habitats in the North Inlet-Winyah Bay estuarine system provide suitable food resources for age-0 tarpon. As water temperatures increase and tropical species, such as tarpon, expand their range, these coastal nursery habitats may become more important for tarpon growth and recruitment to the spawning stock.</p>","PeriodicalId":11799,"journal":{"name":"Environmental Biology of Fishes","volume":null,"pages":null},"PeriodicalIF":1.4,"publicationDate":"2024-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141509132","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exploring the molecular basis of diapause I induction in the annual killifish Garcialebias charrua: a transcriptomic approach 探索一年生鳉鱼(Garcialebias charrua)休眠 I 诱导的分子基础:转录组学方法
IF 1.4 4区 环境科学与生态学 Q3 ECOLOGY Pub Date : 2024-06-18 DOI: 10.1007/s10641-024-01562-x
N. G. Papa, J. Sotelo-Silveira, L. Inchausti, C. Valdivieso, L. Pereiro, F. Gajardo, A. Di Genova, A. Glavic, C. Chalar, N. Berois, Miguel L. Allende, Maria Jose Arezo

One of the most unique examples of adaptation to extreme environments is exemplified by diapauses (I, II and III) in annual killifish embryos. We aimed to understand the molecular mechanisms involved in the regulation of these arrests. In this context, we first comprehensively analysed the expression of genes using a transcriptomic approach to distinguish between two developmental trajectories: diapause induction and non-diapause induction. We focused on the process of diapause I induction by comparing the mRNA profiles at the maternal stage with those of diapause I-induced embryos, non-diapause I-induced embryos and embryos that had exited diapause I. Our analysis revealed approximately seven hundred transcripts that were differentially and exclusively expressed upon the induction of diapause I. The Gene Ontology (GO) categories of the gene-specific transcriptional regulator group, RNA metabolism, cytoskeletal protein and scaffold/adaptor proteins exhibited the highest representation among differentially expressed genes (DEGs) and coexpression analysis. Remarkably, the identification of different homeodomain transcription factors, cell cycle regulators and RNA processing/regulators as DEGs suggests that these regulators play important roles in Garcialebias charrua diapause I induction. Consistent with the results of the DEG analysis, the results of the Clust coexpression analysis revealed 5 and 3 patterns of diapause I-induced gene upregulation and downregulation, corresponding to 3939 and 1250 genes, respectively. Comparative expression analysis of genes and signalling pathways reported to contribute to diapauses in other species revealed that insulin/IGF, vitamin D, Wnt, polycomb and heat shock proteins are also involved in diapause I induction in annual killifish.

一年生鳉鱼胚胎的停滞期(I、II 和 III)是适应极端环境的最独特例子之一。我们的目的是了解调控这些停顿的分子机制。在此背景下,我们首先利用转录组学方法全面分析了基因的表达,以区分两种发育轨迹:停顿诱导和非停顿诱导。我们通过比较母体阶段与停顿 I 诱导胚胎、非停顿 I 诱导胚胎和退出停顿 I 的胚胎的 mRNA 图谱,重点研究了停顿 I 的诱导过程。在差异表达基因(DEGs)和共表达分析中,基因本体(GO)类别中的基因特异性转录调控因子组、RNA 代谢、细胞骨架蛋白和支架/适应蛋白的代表性最高。值得注意的是,不同的同源转录因子、细胞周期调控因子和 RNA 处理/调控因子被鉴定为 DEGs,这表明这些调控因子在夏鲁虫休眠 I 诱导过程中发挥了重要作用。与 DEG 分析结果一致的是,聚类共表达分析结果显示,休眠 I 诱导的基因上调和下调模式分别为 5 种和 3 种,分别对应 3939 个和 1250 个基因。对其他物种中被报道会导致休眠的基因和信号通路的表达进行比较分析发现,胰岛素/IGF、维生素 D、Wnt、多聚酶和热休克蛋白也参与了一年生杀潮鱼休眠 I 的诱导。
{"title":"Exploring the molecular basis of diapause I induction in the annual killifish Garcialebias charrua: a transcriptomic approach","authors":"N. G. Papa, J. Sotelo-Silveira, L. Inchausti, C. Valdivieso, L. Pereiro, F. Gajardo, A. Di Genova, A. Glavic, C. Chalar, N. Berois, Miguel L. Allende, Maria Jose Arezo","doi":"10.1007/s10641-024-01562-x","DOIUrl":"https://doi.org/10.1007/s10641-024-01562-x","url":null,"abstract":"<p>One of the most unique examples of adaptation to extreme environments is exemplified by diapauses (I, II and III) in annual killifish embryos. We aimed to understand the molecular mechanisms involved in the regulation of these arrests. In this context, we first comprehensively analysed the expression of genes using a transcriptomic approach to distinguish between two developmental trajectories: diapause induction and non-diapause induction. We focused on the process of diapause I induction by comparing the mRNA profiles at the maternal stage with those of diapause I-induced embryos, non-diapause I-induced embryos and embryos that had exited diapause I. Our analysis revealed approximately seven hundred transcripts that were differentially and exclusively expressed upon the induction of diapause I. The Gene Ontology (GO) categories of the gene-specific transcriptional regulator group, RNA metabolism, cytoskeletal protein and scaffold/adaptor proteins exhibited the highest representation among differentially expressed genes (DEGs) and coexpression analysis. Remarkably, the identification of different homeodomain transcription factors, cell cycle regulators and RNA processing/regulators as DEGs suggests that these regulators play important roles in <i>Garcialebias charrua</i> diapause I induction. Consistent with the results of the DEG analysis, the results of the Clust coexpression analysis revealed 5 and 3 patterns of diapause I-induced gene upregulation and downregulation, corresponding to 3939 and 1250 genes, respectively. Comparative expression analysis of genes and signalling pathways reported to contribute to diapauses in other species revealed that insulin/IGF, vitamin D, Wnt, polycomb and heat shock proteins are also involved in diapause I induction in annual killifish.</p>","PeriodicalId":11799,"journal":{"name":"Environmental Biology of Fishes","volume":null,"pages":null},"PeriodicalIF":1.4,"publicationDate":"2024-06-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141509131","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Resiliency of black sea bass, Centropristis striata, early life stages to future high CO2 conditions 黑鲈(Centropristis striata)早期生命阶段对未来高二氧化碳条件的适应能力
IF 1.4 4区 环境科学与生态学 Q3 ECOLOGY Pub Date : 2024-06-12 DOI: 10.1007/s10641-024-01561-y
Max D. Zavell, Hannes Baumann
{"title":"Resiliency of black sea bass, Centropristis striata, early life stages to future high CO2 conditions","authors":"Max D. Zavell, Hannes Baumann","doi":"10.1007/s10641-024-01561-y","DOIUrl":"https://doi.org/10.1007/s10641-024-01561-y","url":null,"abstract":"","PeriodicalId":11799,"journal":{"name":"Environmental Biology of Fishes","volume":null,"pages":null},"PeriodicalIF":1.4,"publicationDate":"2024-06-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141354836","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Methodological influence on detecting temperature effects on growth variability in juvenile Atlantic salmon 检测温度对大西洋鲑幼鱼生长变化影响的方法学影响
IF 1.4 4区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2024-05-31 DOI: 10.1007/s10641-024-01558-7
Jean-Michel O. Matte, Guillaume J.R. Dauphin, André St-Hilaire, Carole-Anne Gillis, Normand E. Bergeron, Cindy Breau

In the context of warming freshwater habitats, protection of Atlantic salmon populations requires an understanding of the effects of temperature on somatic growth during the juvenile life stage. However, quantifying the effect of temperature on growth is challenging given differences among methodologies, metrics of growth, and their underlying assumptions. Using short term studies (2000–2002) in two Canadian populations of wild Atlantic salmon (Margaree and Miramichi rivers), we investigate whether different hierarchical modeling approaches influence the derivation of temperature-growth relationships, by contrasting seasonal growth trajectories (von Bertalanffy; VBGF) to size-at-age data models built with instantaneous growth rates. Size-at-age data analysed seasonally with the VBGF framework failed to detect an effect of temperature, whereas instantaneous growth rates from the same dataset were strongly related to temperature metrics. However, instantaneous growth rates cannot be used to extrapolate predictions into meaningful metrics for fisheries management (e.g., size at the end of the growing season). Nevertheless, we show that size at the end of the growing season can be predicted with VBGF models accounting for site-level variation, which in turn are related to temperature metrics, as observed for instantaneous growth rates. Taken together, these results show that combining these two approaches (size-at-age, growth rates) can circumvent their intrinsic drawbacks and reveal essential ecological patterns that may otherwise remain undetected. In cases where instantaneous growth rates are not available, relating predicted size-at-age from hierarchical VBGF to temperature provides an interesting alternative for detecting subtle environmental effects, even if the VBGF parameters or its residuals are unrelated to temperature metrics.

在淡水生境变暖的背景下,保护大西洋鲑鱼种群需要了解温度对幼鱼生命阶段体细胞生长的影响。然而,由于不同的方法、生长指标及其基本假设存在差异,量化温度对生长的影响具有挑战性。通过对加拿大两个野生大西洋鲑种群(Margaree 河和 Miramichi 河)的短期研究(2000-2002 年),我们对比了季节性生长轨迹(von Bertalanffy;VBGF)和用瞬时生长率建立的年龄大小数据模型,研究了不同的分层建模方法是否会影响温度-生长关系的推导。用 VBGF 框架按季节分析的年龄大小数据未能发现温度的影响,而同一数据集的瞬时生长率与温度指标密切相关。然而,瞬时生长率并不能用来推断渔业管理中的有意义指标(如生长季节结束时的大小)。不过,我们的研究表明,生长季结束时的大小可以通过考虑地点水平变化的 VBGF 模型来预测,而地点水平变化又与温度指标有关,正如瞬时生长率所观察到的那样。总之,这些结果表明,将这两种方法(年龄大小和生长率)结合起来,可以避免其固有的缺点,并揭示出可能无法发现的基本生态模式。在没有瞬时生长率的情况下,将分层 VBGF 预测的年龄大小与温度联系起来,即使 VBGF 参数或其残差与温度指标无关,也能为检测微妙的环境影响提供一种有趣的替代方法。
{"title":"Methodological influence on detecting temperature effects on growth variability in juvenile Atlantic salmon","authors":"Jean-Michel O. Matte, Guillaume J.R. Dauphin, André St-Hilaire, Carole-Anne Gillis, Normand E. Bergeron, Cindy Breau","doi":"10.1007/s10641-024-01558-7","DOIUrl":"https://doi.org/10.1007/s10641-024-01558-7","url":null,"abstract":"<p>In the context of warming freshwater habitats, protection of Atlantic salmon populations requires an understanding of the effects of temperature on somatic growth during the juvenile life stage. However, quantifying the effect of temperature on growth is challenging given differences among methodologies, metrics of growth, and their underlying assumptions. Using short term studies (2000–2002) in two Canadian populations of wild Atlantic salmon (Margaree and Miramichi rivers), we investigate whether different hierarchical modeling approaches influence the derivation of temperature-growth relationships, by contrasting seasonal growth trajectories (von Bertalanffy; VBGF) to size-at-age data models built with instantaneous growth rates. Size-at-age data analysed seasonally with the VBGF framework failed to detect an effect of temperature, whereas instantaneous growth rates from the same dataset were strongly related to temperature metrics. However, instantaneous growth rates cannot be used to extrapolate predictions into meaningful metrics for fisheries management (e.g., size at the end of the growing season). Nevertheless, we show that size at the end of the growing season can be predicted with VBGF models accounting for site-level variation, which in turn are related to temperature metrics, as observed for instantaneous growth rates. Taken together, these results show that combining these two approaches (size-at-age, growth rates) can circumvent their intrinsic drawbacks and reveal essential ecological patterns that may otherwise remain undetected. In cases where instantaneous growth rates are not available, relating predicted size-at-age from hierarchical VBGF to temperature provides an interesting alternative for detecting subtle environmental effects, even if the VBGF parameters or its residuals are unrelated to temperature metrics.</p>","PeriodicalId":11799,"journal":{"name":"Environmental Biology of Fishes","volume":null,"pages":null},"PeriodicalIF":1.4,"publicationDate":"2024-05-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141188546","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Whitish film covering a newborn white shark was not intrauterine material but embryonic epithelium 覆盖在新生白鲨身上的白色薄膜不是宫内物质,而是胚胎上皮
IF 1.4 4区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2024-05-28 DOI: 10.1007/s10641-024-01560-z
Taketeru Tomita, Kei Miyamoto, Masaru Nakamura, Kiyomi Murakumo, Minoru Toda, Keiichi Sato

We provide an alternative interpretation for the “whitish film” that covered the young white shark observed with an aerial drone in a paper published recently (Gauna and Sternes, Environ Biol Fish 107:249–254, 2024). The paper claimed that this whitish film was a leftover intrauterine substance (e.g., uterine milk, which is a maternal secretion to nourish embryos), thus suggesting that the individual was a newborn. However, we are skeptical of this interpretation for the following reasons: (1) our previous studies showed that the secretion of intrauterine substances in white sharks ceases in mid-gestation and, (2) even if the secretion continues until birth, the substance is unlikely to be retained on the skin for a long time after birth. Based on data from Lamna ditropis, a close relative of the white shark, we hypothesize that the whitish film is an embryonic epithelium that covers the surface of skin denticles. This reinterpretation does not alter but reinforces the major conclusion of (Gauna and Sternes, Environ Biol Fish 107:249–254, 2024) that the individual sighted is a newborn.

我们对最近发表的一篇论文(Gauna 和 Sternes,Environ Biol Fish 107:249-254, 2024)中用无人机观察到的覆盖在小白鲨身上的 "白色薄膜 "提供了另一种解释。该论文声称,这层白色薄膜是宫内残留物质(如子宫乳汁,这是一种滋养胚胎的母体分泌物),因此表明该个体是新生儿。然而,我们对这种解释持怀疑态度,原因如下:(1)我们之前的研究表明,白鲨的宫内物质分泌在妊娠中期就会停止;(2)即使分泌一直持续到出生,这种物质也不可能在出生后长时间保留在皮肤上。根据白鲨近亲 Lamna ditropis 的数据,我们假设白色薄膜是覆盖在皮肤小齿表面的胚胎上皮。这一重新解释并没有改变而是加强了(Gauna 和 Sternes,Environ Biol Fish 107:249-254, 2024)的主要结论,即看到的个体是新生儿。
{"title":"Whitish film covering a newborn white shark was not intrauterine material but embryonic epithelium","authors":"Taketeru Tomita, Kei Miyamoto, Masaru Nakamura, Kiyomi Murakumo, Minoru Toda, Keiichi Sato","doi":"10.1007/s10641-024-01560-z","DOIUrl":"https://doi.org/10.1007/s10641-024-01560-z","url":null,"abstract":"<p>We provide an alternative interpretation for the “whitish film” that covered the young white shark observed with an aerial drone in a paper published recently (Gauna and Sternes, Environ Biol Fish 107:249–254, 2024). The paper claimed that this whitish film was a leftover intrauterine substance (e.g., uterine milk, which is a maternal secretion to nourish embryos), thus suggesting that the individual was a newborn. However, we are skeptical of this interpretation for the following reasons: (1) our previous studies showed that the secretion of intrauterine substances in white sharks ceases in mid-gestation and, (2) even if the secretion continues until birth, the substance is unlikely to be retained on the skin for a long time after birth. Based on data from <i>Lamna ditropis</i>, a close relative of the white shark, we hypothesize that the whitish film is an embryonic epithelium that covers the surface of skin denticles. This reinterpretation does not alter but reinforces the major conclusion of (Gauna and Sternes, Environ Biol Fish 107:249–254, 2024) that the individual sighted is a newborn.</p>","PeriodicalId":11799,"journal":{"name":"Environmental Biology of Fishes","volume":null,"pages":null},"PeriodicalIF":1.4,"publicationDate":"2024-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141168475","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of plasticity and genetic divergence in phenotypic trait expression of sulfide spring fishes 硫化泉鱼类表型性状表达的可塑性和遗传差异的影响
IF 1.4 4区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2024-05-28 DOI: 10.1007/s10641-024-01555-w
Madison Nobrega, Ryan Greenway, Courtney N. Passow, Lenin Arias Rodriguez, Michael Tobler

Natural environments vary, and organisms cope with this variation in two general ways: local adaptation and phenotypic plasticity, although these strategies often overlap and interact. This study explored how local adaptation, phenotypic plasticity, and their interactions shaped phenotypic variation in populations of Poecilia mexicana, an extremophile fish living in adjacent but ecologically divergent habitats. By comparing populations from the wild with fish raised in a common-garden environment, we evaluated how genetic differentiation between populations and plasticity contributed to the phenotypic variation observed in nature. We quantified variation in the size of six organs (brain, eyes, gills, heart, liver, and gastrointestinal tract), routine metabolic rate, and body shape. We found evidence for genetic differences between populations impacting the expression of the majority of traits, in addition to or in interaction with phenotypic plasticity and other predictor variables. Overall, our results suggest that trait divergence between populations was at least in part driven by evolutionary change and not just merely by plasticity induced by environmental differences between habitats. Future studies will have to rigorously test whether evolutionary divergence was caused by natural selection and what traits represent adaptations to the different ecological conditions.

自然环境千差万别,生物应对这种变化的方式一般有两种:局部适应和表型可塑性,尽管这些策略经常相互重叠和相互作用。本研究探讨了本地适应性、表型可塑性及其相互作用如何影响墨西哥鲈鱼(Poecilia mexicana)种群的表型变异,墨西哥鲈鱼是一种嗜极鱼类,生活在相邻但生态不同的栖息地。通过比较野生种群和在公共花园环境中饲养的鱼类,我们评估了种群间的遗传分化和可塑性是如何导致自然界中观察到的表型变异的。我们对六个器官(脑、眼睛、鳃、心脏、肝脏和胃肠道)的大小、常规代谢率和体形的变化进行了量化。我们发现有证据表明,除了表型可塑性和其他预测变量之外,不同种群之间的遗传差异也会影响大多数性状的表达。总之,我们的研究结果表明,种群间的性状差异至少部分是由进化变化驱动的,而不仅仅是由栖息地环境差异引起的可塑性所导致的。未来的研究必须严格检验进化分化是否是由自然选择引起的,以及哪些特征代表了对不同生态条件的适应。
{"title":"Effects of plasticity and genetic divergence in phenotypic trait expression of sulfide spring fishes","authors":"Madison Nobrega, Ryan Greenway, Courtney N. Passow, Lenin Arias Rodriguez, Michael Tobler","doi":"10.1007/s10641-024-01555-w","DOIUrl":"https://doi.org/10.1007/s10641-024-01555-w","url":null,"abstract":"<p>Natural environments vary, and organisms cope with this variation in two general ways: local adaptation and phenotypic plasticity, although these strategies often overlap and interact. This study explored how local adaptation, phenotypic plasticity, and their interactions shaped phenotypic variation in populations of <i>Poecilia mexicana</i>, an extremophile fish living in adjacent but ecologically divergent habitats. By comparing populations from the wild with fish raised in a common-garden environment, we evaluated how genetic differentiation between populations and plasticity contributed to the phenotypic variation observed in nature. We quantified variation in the size of six organs (brain, eyes, gills, heart, liver, and gastrointestinal tract), routine metabolic rate, and body shape. We found evidence for genetic differences between populations impacting the expression of the majority of traits, in addition to or in interaction with phenotypic plasticity and other predictor variables. Overall, our results suggest that trait divergence between populations was at least in part driven by evolutionary change and not just merely by plasticity induced by environmental differences between habitats. Future studies will have to rigorously test whether evolutionary divergence was caused by natural selection and what traits represent adaptations to the different ecological conditions.</p>","PeriodicalId":11799,"journal":{"name":"Environmental Biology of Fishes","volume":null,"pages":null},"PeriodicalIF":1.4,"publicationDate":"2024-05-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141168220","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Ontogenetic colour change and distributional aspects of Lepidion guentheri (Giglioli 1880) (Gadiformes, Moridae) Lepidion guentheri (Giglioli 1880) (Gadiformes, Moridae) 的体色变化和分布情况
IF 1.4 4区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2024-05-22 DOI: 10.1007/s10641-024-01559-6
Rafael Bañón, A. de Carlos, Francisco Baldó
{"title":"Ontogenetic colour change and distributional aspects of Lepidion guentheri (Giglioli 1880) (Gadiformes, Moridae)","authors":"Rafael Bañón, A. de Carlos, Francisco Baldó","doi":"10.1007/s10641-024-01559-6","DOIUrl":"https://doi.org/10.1007/s10641-024-01559-6","url":null,"abstract":"","PeriodicalId":11799,"journal":{"name":"Environmental Biology of Fishes","volume":null,"pages":null},"PeriodicalIF":1.4,"publicationDate":"2024-05-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141111878","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Environmental Biology of Fishes
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1