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Mitochondria: the epigenetic regulators of ovarian aging and longevity. 线粒体:卵巢衰老和长寿的表观遗传调节器。
IF 3.9 2区 医学 Q2 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-11-13 eCollection Date: 2024-01-01 DOI: 10.3389/fendo.2024.1424826
Shalini Mani, Vidushi Srivastava, Chesta Shandilya, Aditi Kaushik, Keshav K Singh

Ovarian aging is a major health concern for women. Ovarian aging is associated with reduced health span and longevity. Mitochondrial dysfunction is one of the hallmarks of ovarian aging. In addition to providing oocytes with optimal energy, the mitochondria provide a co-substrate that drives epigenetic processes. Studies show epigenetic alterations, both nuclear and mitochondrial contribute to ovarian aging. Both, nuclear and mitochondrial genomes cross-talk with each other, resulting in two ways orchestrated anterograde and retrograde response that involves epigenetic changes in nuclear and mitochondrial compartments. Epigenetic alterations causing changes in metabolism impact ovarian function. Key mitochondrial co-substrate includes acetyl CoA, NAD+, ATP, and α-KG. Thus, enhancing mitochondrial function in aging ovaries may preserve ovarian function and can lead to ovarian longevity and reproductive and better health outcomes in women. This article describes the role of mitochondria-led epigenetics involved in ovarian aging and discusses strategies to restore epigenetic reprogramming in oocytes by preserving, protecting, or promoting mitochondrial function.

卵巢衰老是妇女健康的一个主要问题。卵巢衰老与健康寿命缩短和长寿有关。线粒体功能障碍是卵巢衰老的标志之一。线粒体除了为卵母细胞提供最佳能量外,还提供了驱动表观遗传过程的辅助底物。研究表明,细胞核和线粒体的表观遗传改变都会导致卵巢衰老。核基因组和线粒体基因组相互交织,产生了前向和逆向反应,涉及核和线粒体中的表观遗传变化。表观遗传改变导致新陈代谢发生变化,从而影响卵巢功能。线粒体的主要辅助底物包括乙酰 CoA、NAD+、ATP 和 α-KG。因此,增强衰老卵巢的线粒体功能可保护卵巢功能,并能延长卵巢寿命,改善妇女的生殖健康状况。本文介绍了线粒体主导的表观遗传学在卵巢衰老中的作用,并讨论了通过保存、保护或促进线粒体功能来恢复卵母细胞表观遗传学重编程的策略。
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引用次数: 0
Editorial: Insights in obesity: 2023. 社论:肥胖症观察:2023 年。
IF 3.9 2区 医学 Q2 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-11-13 eCollection Date: 2024-01-01 DOI: 10.3389/fendo.2024.1489087
Katsunori Nonogaki
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引用次数: 0
Ferroptosis-related biomarkers for adamantinomatous craniopharyngioma treatment: conclusions from machine learning techniques. 治疗金刚瘤性颅咽管瘤的铁突变相关生物标志物:机器学习技术的结论。
IF 3.9 2区 医学 Q2 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-11-13 eCollection Date: 2024-01-01 DOI: 10.3389/fendo.2024.1362278
Ying Feng, Zhen Zhang, Jiahao Tang, Yan Chen, Dan Hu, Xinwei Huang, Fangping Li

Introduction: Adamantinomatous craniopharyngioma (ACP) is difficult to cure completely and prone to recurrence after surgery. Ferroptosis as an iron-dependent programmed cell death, may be a critical process in ACP. The study aimed to screen diagnostic markers related to ferroptosis in ACP to improve diagnostic accuracy.

Methods: Gene expression profiles of ACP were obtained from the gene expression omnibus (GEO) database. Limma package was used to analyze the differently expressed genes (DEGs). The intersection of DEGs and ferroptosis-related factors was obtained as differently expressed ferroptosis-related genes (DEFRGs). Enrichment analysis was processed, including Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), disease ontology (DO), gene set enrichment analysis (GSEA), and Gene Set Variation Analysis (GSVA) analysis. Machine learning algorithms were undertaken for screening diagnostic markers associated with ferroptosis in ACP. The levels of DEFRGs were verified in ACP patients. A nomogram was drawn to predict the relationship between key DEFRG expression and risk of disease. The disease groups were then clustered by consensus clustering analysis.

Results: DEGs were screened between ACP and normal samples. Ferroptosis-related factors were obtained from the FerrDb V2 and GeneCard databases. The correlation between DEFRGs and ferroptosis markers was also confirmed. A total of 6 overlapped DEFRGs were obtained. Based on the results of the nomogram, CASP8, KRT16, KRT19, and TP63 were the protective factors of the risk of disease, while GOT1 and TFAP2C were the risk factors. According to screened DEFRGs, the consensus clustering matrix was differentiated, and the number of clusters was stable. CASP8, KRT16, KRT19, and TP63, were upregulated in ACP patients, while GOT1 was downregulated. CASP8, KRT16, KRT19, TP63, CASP8, and GOT1 affect multiple ferroptosis marker genes. The combination of these genes might be the biomarker for ACP diagnosis via participating ferroptosis process.

Discussion: Ferroptosis-related genes, including CASP8, KRT16, KRT19, TP63, and GOT1 were the potential markers for ACP, which lays the theoretical foundation for ACP diagnosis.

导言:金刚瘤性颅咽管瘤(ACP)难以彻底治愈,术后容易复发。铁突变作为一种铁依赖性程序性细胞死亡,可能是ACP的一个关键过程。该研究旨在筛选ACP中与铁突变相关的诊断标记物,以提高诊断的准确性:方法:从基因表达总库(GEO)数据库中获取 ACP 的基因表达谱。方法:从基因表达总库(GEO)数据库中获取 ACP 的基因表达谱,使用 Limma 软件包分析差异表达基因(DEGs)。将 DEGs 与铁蛋白沉积相关因子的交叉点作为不同表达的铁蛋白沉积相关基因(DEFRGs)。富集分析包括基因本体(GO)、京都基因和基因组百科全书(KEGG)、疾病本体(DO)、基因组富集分析(GSEA)和基因组变异分析(GSVA)。采用机器学习算法筛选了与 ACP 中铁细胞减少症相关的诊断标记物。对 ACP 患者的 DEFRGs 水平进行了验证。通过绘制提名图来预测关键 DEFRG 表达与疾病风险之间的关系。然后通过共识聚类分析对疾病组进行聚类:结果:筛查了 ACP 与正常样本之间的 DEGs。从 FerrDb V2 和 GeneCard 数据库中获得了铁蛋白沉积相关因子。DEFRGs 与铁突变标志物之间的相关性也得到了证实。共获得了 6 个重叠的 DEFRGs。根据提名图的结果,CASP8、KRT16、KRT19 和 TP63 是疾病风险的保护因素,而 GOT1 和 TFAP2C 则是风险因素。根据筛选出的 DEFRGs,共识聚类矩阵得到了分化,且聚类数量稳定。CASP8、KRT16、KRT19和TP63在ACP患者中上调,而GOT1下调。CASP8、KRT16、KRT19、TP63、CASP8和GOT1影响多个铁变态标记基因。这些基因的组合可能是通过参与铁突变过程诊断 ACP 的生物标志物:讨论:CASP8、KRT16、KRT19、TP63和GOT1等铁突变相关基因是ACP的潜在标记基因,这为ACP的诊断奠定了理论基础。
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引用次数: 0
Editorial: Pulmonary fibrosis and endocrine factors. 社论:肺纤维化与内分泌因素。
IF 3.9 2区 医学 Q2 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-11-13 eCollection Date: 2024-01-01 DOI: 10.3389/fendo.2024.1519318
Pengxiu Cao, Hong-Long James Ji, Jianwei Sun
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引用次数: 0
Relationship between liver and cardiometabolic health in type 1 diabetes. 1 型糖尿病患者肝脏与心脏代谢健康之间的关系。
IF 3.9 2区 医学 Q2 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-11-13 eCollection Date: 2024-01-01 DOI: 10.3389/fendo.2024.1505430
Emir Tas, Bach-Mai Katherine Vu, Brenda Mendizabal, Ingrid Libman, Radhika Muzumdar

Introduction: Type 1 diabetes (T1D) is a chronic condition marked by insulin deficiency and hyperglycemia, with an increasing global incidence, particularly among children. Despite improvements in diabetes management, individuals with T1D continue to experience higher rates of cardiovascular disease (CVD), the leading cause of mortality in this population. Traditional CVD risk factors such as dyslipidemia and poor glycemic control are insufficient to fully explain the elevated risk in T1D, prompting further investigation into additional factors. Emerging evidence suggests that metabolic dysfunction-associated steatotic liver disease (MASLD) plays a critical role in this heightened CVD risk.

Objective: This narrative review aims to explore the relationship between MASLD and CVD in individuals with T1D. The review focuses on the prevalence of MASLD, its contributing risk factors, and the potential impact of liver dysfunction on cardiovascular outcomes in this population.

Methods: A review of existing literature was conducted, focusing on observational studies, cohort studies, and meta-analyses that investigate the prevalence of MASLD in T1D populations and its association with CVD. The review also examines the physiological mechanisms linking MASLD and CVD, including insulin resistance, systemic inflammation, and hepatic dyslipidemia. Key studies were evaluated to identify patterns in MASLD prevalence based on diagnostic modalities and to assess the independent contribution of MASLD to cardiovascular risk in T1D patients.

Conclusion: MASLD is increasingly recognized as a significant contributor to CVD in individuals with T1D, particularly in those with shared risk factors like obesity and insulin resistance. Evidence suggests that MASLD exacerbates hepatic and systemic metabolic dysfunction, increasing CVD risk through mechanisms such as chronic inflammation and atherogenic lipid profiles. Routine liver health assessments and tailored management strategies targeting MASLD should be incorporated into clinical care for individuals with T1D to mitigate long-term cardiovascular complications.

简介1 型糖尿病(T1D)是一种以胰岛素缺乏和高血糖为特征的慢性疾病,全球发病率不断上升,尤其是在儿童中。尽管糖尿病管理有所改善,但 T1D 患者罹患心血管疾病(CVD)的比例仍然较高,而心血管疾病是导致该人群死亡的主要原因。血脂异常和血糖控制不佳等传统心血管疾病风险因素不足以完全解释 T1D 患者风险升高的原因,这促使人们进一步研究其他因素。新出现的证据表明,代谢功能障碍相关性脂肪性肝病(MASLD)在心血管疾病风险升高的过程中起着至关重要的作用:本叙述性综述旨在探讨 T1D 患者的代谢功能障碍相关性脂肪性肝病与心血管疾病之间的关系。综述的重点是 MASLD 的患病率、其诱发风险因素以及肝功能异常对该人群心血管疾病预后的潜在影响:对现有文献进行了综述,重点研究了T1D人群中MASLD的患病率及其与心血管疾病相关的观察性研究、队列研究和荟萃分析。综述还探讨了 MASLD 与心血管疾病相关的生理机制,包括胰岛素抵抗、全身炎症和肝脏血脂异常。对主要研究进行了评估,以确定基于诊断模式的MASLD患病率模式,并评估MASLD对T1D患者心血管风险的独立贡献:结论:人们日益认识到,MASLD是导致T1D患者心血管疾病的重要因素,尤其是在具有肥胖和胰岛素抵抗等共同风险因素的患者中。有证据表明,MASLD 会加剧肝脏和全身代谢功能障碍,通过慢性炎症和致动脉粥样硬化血脂等机制增加心血管疾病风险。应将常规肝脏健康评估和针对 MASLD 的定制管理策略纳入 T1D 患者的临床护理中,以减轻长期心血管并发症。
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引用次数: 0
Glucagon-like peptide-1 receptor agonists and the risk of erectile dysfunction: a drug target Mendelian randomization study. 胰高血糖素样肽-1 受体激动剂与勃起功能障碍的风险:药物靶点孟德尔随机研究。
IF 3.9 2区 医学 Q2 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-11-13 eCollection Date: 2024-01-01 DOI: 10.3389/fendo.2024.1448394
Hongjin An, Kexin Xie, Huatian Gan

Background: Glucagon-like peptide-1 receptor agonists (GLP-1RAs) have been widely used for type 2 diabetes (T2D) and weight management. However, the causal relationship of GLP-1RAs with erectile dysfunction (ED) was still unclear.

Methods: Mendelian randomization (MR) analysis was conducted to reveal the association of genetically proxied GLP-1RAs with ED. The proportion of potential mediators mediating GLP-1RAs to ED was also assessed by two-step MR. Finally, a series of sensitivity analyses and Two-Sep cis-MR (TSCMR) were performed to evaluate the robustness of the results.

Results: MR evidence suggested that genetically proxied GLP-1RAs reduced the risk of ED [odds ratio (OR): 0.493; 95% confidence interval (95% CI): 0.430 to 0.565; P<0.001]. Further mediation analysis via two-step MR showed that this effect was partly mediated through reduced T2D, obesity, hypertension and cardiovascular disease (CVD), with mediated proportions of 2.89% (95% CI: 1.28% to 4.49%), 6.83% (95% CI: 2.25% to 11.41%), 3.22% (95% CI: 1.21% to 5.23%), and 3.06% (95% CI: 0.51% to 5.62%), respectively.

Conclusions: GLP-1RAs were associated with a reduced risk of ED, and to a lesser extent, T2D, obesity, hypertension and CVD mediated this effect. Nevertheless, the potential implications of our results for ED prevention policies required validation in further clinical randomized controlled trials.

背景:胰高血糖素样肽-1受体激动剂(GLP-1RA)已被广泛用于治疗2型糖尿病(T2D)和控制体重。然而,GLP-1RA 与勃起功能障碍(ED)的因果关系仍不明确:方法:研究人员采用孟德尔随机化(MR)分析方法揭示了基因代GLP-1RA与勃起功能障碍的关系。此外,还通过两步 MR 评估了介导 GLP-1RA 与 ED 的潜在介质比例。最后,进行了一系列敏感性分析和两步顺式磁共振(TSCMR),以评估结果的稳健性:MR证据表明,基因代GLP-1RA可降低ED风险[几率比(OR):0.493;95%置信区间(95% CI):0.430至0.565;PC结论:GLP-1RA与ED相关:GLP-1RA与ED风险的降低有关,而在较小程度上,T2D、肥胖、高血压和心血管疾病介导了这种效应。尽管如此,我们的研究结果对ED预防政策的潜在影响还需要进一步的临床随机对照试验来验证。
{"title":"Glucagon-like peptide-1 receptor agonists and the risk of erectile dysfunction: a drug target Mendelian randomization study.","authors":"Hongjin An, Kexin Xie, Huatian Gan","doi":"10.3389/fendo.2024.1448394","DOIUrl":"https://doi.org/10.3389/fendo.2024.1448394","url":null,"abstract":"<p><strong>Background: </strong>Glucagon-like peptide-1 receptor agonists (GLP-1RAs) have been widely used for type 2 diabetes (T2D) and weight management. However, the causal relationship of GLP-1RAs with erectile dysfunction (ED) was still unclear.</p><p><strong>Methods: </strong>Mendelian randomization (MR) analysis was conducted to reveal the association of genetically proxied GLP-1RAs with ED. The proportion of potential mediators mediating GLP-1RAs to ED was also assessed by two-step MR. Finally, a series of sensitivity analyses and Two-Sep cis-MR (TSCMR) were performed to evaluate the robustness of the results.</p><p><strong>Results: </strong>MR evidence suggested that genetically proxied GLP-1RAs reduced the risk of ED [odds ratio (OR): 0.493; 95% confidence interval (95% CI): 0.430 to 0.565; <i>P</i><0.001]. Further mediation analysis via two-step MR showed that this effect was partly mediated through reduced T2D, obesity, hypertension and cardiovascular disease (CVD), with mediated proportions of 2.89% (95% CI: 1.28% to 4.49%), 6.83% (95% CI: 2.25% to 11.41%), 3.22% (95% CI: 1.21% to 5.23%), and 3.06% (95% CI: 0.51% to 5.62%), respectively.</p><p><strong>Conclusions: </strong>GLP-1RAs were associated with a reduced risk of ED, and to a lesser extent, T2D, obesity, hypertension and CVD mediated this effect. Nevertheless, the potential implications of our results for ED prevention policies required validation in further clinical randomized controlled trials.</p>","PeriodicalId":12447,"journal":{"name":"Frontiers in Endocrinology","volume":"15 ","pages":"1448394"},"PeriodicalIF":3.9,"publicationDate":"2024-11-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11600104/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142738921","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development and characterization of an in vitro fluorescently tagged 3D bone-cartilage interface model. 体外荧光标记三维骨-软骨界面模型的开发与表征。
IF 3.9 2区 医学 Q2 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-11-12 eCollection Date: 2024-01-01 DOI: 10.3389/fendo.2024.1484912
Mary Adams, Jessica Cottrell

Three-dimensional cultures are widely used to study bone and cartilage. These models often focus on the interaction between osteoblasts and osteoclasts or osteoblasts and chondrocytes. A culture of osteoblasts, osteoclasts and chondrocytes would represent the cells that interact in the joint and a model with these cells could be used to study many diseases that affect the joints. The goal of this study was to develop 3D bone-cartilage interface (3D-BCI) that included osteoblasts, osteocytes, osteoclasts, and cartilage. Fluorescently tagged cell lines were developed to assess the interactions as cells differentiate to form bone and cartilage. Mouse cell line, MC3T3, was labeled with a nuclear GFP tag and differentiated into osteoblasts and osteocytes in Matrigel. Raw264.7 cells transfected with a red cytoplasmic tag were added to the system and differentiated with the MC3T3 cells to form osteoclasts. A new method was developed to differentiate chondrocyte cell line ATDC5 in a cartilage spheroid, and the ATDC5 spheroid was added to the MC3T3 and Raw264.7 cell model. We used an Incucyte and functional analysis to assess the cells throughout the differentiation process. The 3D-BCI model was found to be positive for TRAP, ALP, Alizarin red and Alcian blue staining to confirm osteoblastogenesis, osteoclastogenesis, and cartilage formation. Gene expression confirmed differentiation of cells based on increased expression of osteoblast markers: Alpl, Bglap, Col1A2, and Runx2, cartilage markers: Acan, Col2A1, Plod2, and osteoclast markers: Acp5, Rank and Ctsk. Based on staining, protein expression and gene expression results, we conclude that we successfully developed a mouse model with a 3D bone-cartilage interface.

三维培养物被广泛用于研究骨骼和软骨。这些模型通常侧重于成骨细胞和破骨细胞或成骨细胞和软骨细胞之间的相互作用。成骨细胞、破骨细胞和软骨细胞的培养物将代表关节中相互作用的细胞,使用这些细胞的模型可用于研究影响关节的多种疾病。本研究的目标是开发包括成骨细胞、破骨细胞、破骨细胞和软骨在内的三维骨-软骨界面(3D-BCI)。开发了荧光标记细胞系,以评估细胞分化形成骨和软骨时的相互作用。小鼠细胞系 MC3T3 被标记了核 GFP 标签,并在 Matrigel 中分化成成骨细胞和骨细胞。将转染红色胞质标签的 Raw264.7 细胞加入该系统,并与 MC3T3 细胞一起分化形成破骨细胞。我们开发了一种在软骨球体内分化软骨细胞系 ATDC5 的新方法,并将 ATDC5 球体添加到 MC3T3 和 Raw264.7 细胞模型中。我们使用 Incucyte 和功能分析来评估细胞的整个分化过程。结果发现,3D-BCI 模型的 TRAP、ALP、茜素红和阿尔新蓝染色均呈阳性,证实了成骨细胞生成、破骨细胞生成和软骨形成。根据成骨细胞标记物表达的增加,基因表达证实了细胞的分化:Alpl、Bglap、Col1A2 和 Runx2,软骨标记物:Acan、Col2A1、Plod2,以及破骨细胞标记:破骨细胞标记:Acp5、Rank 和 Ctsk。根据染色、蛋白表达和基因表达结果,我们得出结论:我们成功地建立了一个具有三维骨-软骨界面的小鼠模型。
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引用次数: 0
Causal links of human serum metabolites on the risk of prostate cancer: insights from genome-wide Mendelian randomization, single-cell RNA sequencing, and metabolic pathway analysis. 人类血清代谢物与前列腺癌风险的因果联系:从全基因组孟德尔随机化、单细胞 RNA 测序和代谢途径分析中获得的启示。
IF 3.9 2区 医学 Q2 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-11-12 eCollection Date: 2024-01-01 DOI: 10.3389/fendo.2024.1443330
Renbing Pan, Jingwen Liu, Mingjia Xiao, Chuanyang Sun, Jianyong Zhu, Lijun Wan, Boxin Xue

Background: Recently, serum metabolites have shown potential in predicting survival outcomes and may be related to the pathogenesis of prostate cancer. Nevertheless, the precise impact concerning the genetic effect of metabolites on prostate cancer risk remains obscure. In this context, we conducted a Mendelian randomization (MR) study aiming to explore the causality between genetically determined metabolites and the risk of prostate cancer.

Methods: We conducted a two-sample MR analysis aiming to identify the underlying metabolites associated with prostate cancer. Exposure information was obtained from the largest metabolome-based genome-wide association (GWAS) data containing 7,824 Europeans. Genome-wide association analysis was utilized to detect instrumental variables (IVs) for metabolites. We applied the inverse-variance weighted (IVW) approach as the primary method, and to augment the reliability and robustness of our findings, additional analysis methods encompassing weighted median, MR-Egger, and leave-one-out analysis were utilized. MR-Egger intercept test was implemented to explore the pleiotropy. Cochran's Q test was utilized to quantify the degree of heterogeneity. Additionally, we performed metabolic pathway analysis and single-cell RNA sequencing analysis.

Results: We found that three serum metabolites were causally associated with prostate cancer after utilizing rigorous screening standards. Utilizing single nucleotide polymorphisms as IVs, a 1-SD increase in fructose was associated with 77% higher risk of prostate cancer (OR:1.77, 95%CI: 1.05-2.97, PIVW=0.031), a 1-SD increase in N1-methyl-3-pyridone-4-carboxamide was associated with 29% higher risk of prostate cancer (OR:1.29, 95%CI: 1.05-1.58, PIVW=0.017), and a 1-SD increase in 12-hydroxyeicosatetraenoate (12-HETE) was associated with 18% higher risk of prostate cancer (OR:1.18, 95%CI: 1.07-1.31, PIVW=0.0008). Metabolites that were causally linked to the risk of prostate cancer were mainly enriched in the valine, leucine and isoleucine biosynthesis pathway (P=0.026) and the nicotinate and nicotinamide metabolism pathway (P=0.048).

Conclusions: Our MR analysis provided suggestive evidence supporting the causal relationships between three identified serum metabolites and prostate cancer, necessitating further investigation to elucidate the underlying mechanisms through which these blood metabolites and metabolic pathways may impact the initiation and progression of prostate cancer.

背景:最近,血清代谢物显示出预测生存结果的潜力,并可能与前列腺癌的发病机制有关。然而,代谢物的遗传效应对前列腺癌风险的确切影响仍不清楚。在此背景下,我们进行了一项孟德尔随机化(MR)研究,旨在探索由基因决定的代谢物与前列腺癌风险之间的因果关系:我们进行了双样本 MR 分析,旨在确定与前列腺癌相关的潜在代谢物。暴露信息来自最大的基于代谢组的全基因组关联(GWAS)数据,其中包含 7824 名欧洲人。全基因组关联分析用于检测代谢物的工具变量(IV)。我们采用了反方差加权(IVW)方法作为主要方法,为了提高研究结果的可靠性和稳健性,我们还采用了包括加权中位数、MR-Egger 和剔除分析在内的其他分析方法。我们采用了 MR-Egger 截距检验来探讨多重效应。Cochran's Q 检验用于量化异质性程度。此外,我们还进行了代谢通路分析和单细胞 RNA 测序分析:结果:采用严格的筛选标准后,我们发现三种血清代谢物与前列腺癌存在因果关系。利用单核苷酸多态性作为 IVs,果糖增加 1-SD 与前列腺癌风险增加 77% 相关(OR:1.77, 95%CI: 1.05-2.97,PIVW=0.031),N1-甲基-3-吡啶酮-4-甲酰胺增加 1-SD 与前列腺癌风险增加 29% 相关(OR:1.29,95%CI:1.05-1.58,PIVW=0.017),12-羟基二十碳四烯酸(12-HETE)增加 1 个标准差与前列腺癌风险增加 18% 相关(OR:1.18,95%CI:1.07-1.31,PIVW=0.0008)。与前列腺癌风险有因果关系的代谢物主要富集在缬氨酸、亮氨酸和异亮氨酸生物合成途径(P=0.026)以及烟酸和烟酰胺代谢途径(P=0.048)中:我们的磁共振分析提供了支持三种已确定的血清代谢物与前列腺癌之间因果关系的提示性证据,因此有必要进行进一步研究,以阐明这些血液代谢物和代谢途径可能影响前列腺癌发生和发展的潜在机制。
{"title":"Causal links of human serum metabolites on the risk of prostate cancer: insights from genome-wide Mendelian randomization, single-cell RNA sequencing, and metabolic pathway analysis.","authors":"Renbing Pan, Jingwen Liu, Mingjia Xiao, Chuanyang Sun, Jianyong Zhu, Lijun Wan, Boxin Xue","doi":"10.3389/fendo.2024.1443330","DOIUrl":"10.3389/fendo.2024.1443330","url":null,"abstract":"<p><strong>Background: </strong>Recently, serum metabolites have shown potential in predicting survival outcomes and may be related to the pathogenesis of prostate cancer. Nevertheless, the precise impact concerning the genetic effect of metabolites on prostate cancer risk remains obscure. In this context, we conducted a Mendelian randomization (MR) study aiming to explore the causality between genetically determined metabolites and the risk of prostate cancer.</p><p><strong>Methods: </strong>We conducted a two-sample MR analysis aiming to identify the underlying metabolites associated with prostate cancer. Exposure information was obtained from the largest metabolome-based genome-wide association (GWAS) data containing 7,824 Europeans. Genome-wide association analysis was utilized to detect instrumental variables (IVs) for metabolites. We applied the inverse-variance weighted (IVW) approach as the primary method, and to augment the reliability and robustness of our findings, additional analysis methods encompassing weighted median, MR-Egger, and leave-one-out analysis were utilized. MR-Egger intercept test was implemented to explore the pleiotropy. Cochran's Q test was utilized to quantify the degree of heterogeneity. Additionally, we performed metabolic pathway analysis and single-cell RNA sequencing analysis.</p><p><strong>Results: </strong>We found that three serum metabolites were causally associated with prostate cancer after utilizing rigorous screening standards. Utilizing single nucleotide polymorphisms as IVs, a 1-SD increase in fructose was associated with 77% higher risk of prostate cancer (OR:1.77, 95%CI: 1.05-2.97, P<sub>IVW</sub>=0.031), a 1-SD increase in N1-methyl-3-pyridone-4-carboxamide was associated with 29% higher risk of prostate cancer (OR:1.29, 95%CI: 1.05-1.58, P<sub>IVW</sub>=0.017), and a 1-SD increase in 12-hydroxyeicosatetraenoate (12-HETE) was associated with 18% higher risk of prostate cancer (OR:1.18, 95%CI: 1.07-1.31, P<sub>IVW</sub>=0.0008). Metabolites that were causally linked to the risk of prostate cancer were mainly enriched in the valine, leucine and isoleucine biosynthesis pathway (P=0.026) and the nicotinate and nicotinamide metabolism pathway (P=0.048).</p><p><strong>Conclusions: </strong>Our MR analysis provided suggestive evidence supporting the causal relationships between three identified serum metabolites and prostate cancer, necessitating further investigation to elucidate the underlying mechanisms through which these blood metabolites and metabolic pathways may impact the initiation and progression of prostate cancer.</p>","PeriodicalId":12447,"journal":{"name":"Frontiers in Endocrinology","volume":"15 ","pages":"1443330"},"PeriodicalIF":3.9,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11590024/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142727564","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification of CAPG as a potential prognostic biomarker associated with immune cell infiltration and ferroptosis in uterine corpus endometrial carcinoma. 将 CAPG 鉴定为与免疫细胞浸润和子宫内膜癌铁质化相关的潜在预后生物标志物。
IF 3.9 2区 医学 Q2 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-11-12 eCollection Date: 2024-01-01 DOI: 10.3389/fendo.2024.1452219
Junwei Liu, Weiqiang Zhu, Lingjin Xia, Qianxi Zhu, Yanyan Mao, Yupei Shen, Min Li, Zhaofeng Zhang, Jing Du

Introduction: Capping actin protein, gelsolin-like (CAPG) is a potential therapeutic target in various cancers. However, the potential immunotherapeutic effects and prognostic value of CAPG in uterine corpus endometrial carcinoma (UCEC) remain unclear.

Methods: The characterization, methylation effects, prognostic value, targeted miRNAs of CAPG, and the correlation of CAPG with immune cell infiltration and ferroptosis in UCEC were investigated using multiple public databases and online tools. Furtherly, we explored the potential physiological function of CAPG using EdU and Transwell migration assays, identified the cell localization and expression of CAPG and GPX4 by immunofluorescence, and detected the intracellular Fe2+ levels using a FerroOrange fluorescent probe in Ishikawa cells. Additionally, the OncoPredict package was used to analyze the potential chemotherapeutic drugs for UCEC.

Results: CAPG showed generally high expression in tumor group. The overall survival rate of the high-risk group was significantly lower than that of the low-risk group. Enrichment analysis indicated that CAPG is involved in immune-related pathways and is closely associated with the tumor microenvironment. CAPG expression levels were affected by abnormal DNA methylation and/or targeted miRNAs, infiltration levels and marker genes of various immune cells, thereby impacting immune response, ferroptosis, and patient prognosis. Ferroptosis analysis indicated that ALOX5 and VLDLR were the top CAPG-related ferroptosis markers; glutathione metabolism levels in tumor group were generally high, and decitabine was a ferroptosis inducer. CAPG-siRNA suppressed the cell proliferation and invasion, and markedly elevated the expression levels of immune-related genes IL8, TNF, TLR4 and the intracellular Fe2+ levels. CAPG co-located with GPX4 in nucleus and co-regulated ferroptosis and metabolism in Ishikawa cells. Moreover, four chemotherapy drugs showed better sensitivity to UCEC patients in the low-risk cohort.

Conclusions: CAPG may serve as a potential biomarker of UCEC owing to its role in modulating the immune response and ferroptosis, providing novel perspectives for combined immunotherapy of UCEC.

简介盖层肌动蛋白,凝胶样蛋白(CAPG)是多种癌症的潜在治疗靶点。然而,CAPG在子宫内膜癌(UCEC)中的潜在免疫治疗作用和预后价值仍不清楚:方法:我们利用多个公共数据库和在线工具,研究了CAPG的特征、甲基化效应、预后价值、靶向miRNAs,以及CAPG与UCEC中免疫细胞浸润和铁质沉着的相关性。此外,我们还利用 EdU 和 Transwell 迁移试验探索了 CAPG 的潜在生理功能,通过免疫荧光鉴定了 CAPG 和 GPX4 的细胞定位和表达,并利用 FerroOrange 荧光探针检测了石川细胞中的细胞内 Fe2+ 水平。此外,还使用 OncoPredict 软件包分析了 UCEC 潜在的化疗药物:结果:CAPG在肿瘤组中普遍高表达。结果表明:CAPG在肿瘤组中普遍高表达,高危组的总生存率明显低于低危组。富集分析表明,CAPG参与免疫相关通路,并与肿瘤微环境密切相关。CAPG的表达水平受DNA甲基化异常和/或靶向miRNA、各种免疫细胞的浸润水平和标记基因的影响,从而影响免疫反应、铁变性和患者预后。铁变态反应分析表明,ALOX5和VLDLR是与CAPG相关的首要铁变态反应标志物;肿瘤组谷胱甘肽代谢水平普遍较高,地西他滨是铁变态反应诱导剂。CAPG-siRNA抑制了细胞的增殖和侵袭,显著提高了免疫相关基因IL8、TNF、TLR4的表达水平和细胞内Fe2+的水平。CAPG与细胞核中的GPX4共位,共同调控石川细胞的铁突变和新陈代谢。此外,四种化疗药物对低风险队列中的UCEC患者有更好的敏感性:结论:CAPG可作为UCEC的潜在生物标志物,因为它在调节免疫反应和铁氧化过程中发挥作用,为UCEC的联合免疫治疗提供了新的视角。
{"title":"Identification of CAPG as a potential prognostic biomarker associated with immune cell infiltration and ferroptosis in uterine corpus endometrial carcinoma.","authors":"Junwei Liu, Weiqiang Zhu, Lingjin Xia, Qianxi Zhu, Yanyan Mao, Yupei Shen, Min Li, Zhaofeng Zhang, Jing Du","doi":"10.3389/fendo.2024.1452219","DOIUrl":"10.3389/fendo.2024.1452219","url":null,"abstract":"<p><strong>Introduction: </strong>Capping actin protein, gelsolin-like (CAPG) is a potential therapeutic target in various cancers. However, the potential immunotherapeutic effects and prognostic value of CAPG in uterine corpus endometrial carcinoma (UCEC) remain unclear.</p><p><strong>Methods: </strong>The characterization, methylation effects, prognostic value, targeted miRNAs of CAPG, and the correlation of CAPG with immune cell infiltration and ferroptosis in UCEC were investigated using multiple public databases and online tools. Furtherly, we explored the potential physiological function of CAPG using EdU and Transwell migration assays, identified the cell localization and expression of CAPG and GPX4 by immunofluorescence, and detected the intracellular Fe<sup>2+</sup> levels using a FerroOrange fluorescent probe in Ishikawa cells. Additionally, the OncoPredict package was used to analyze the potential chemotherapeutic drugs for UCEC.</p><p><strong>Results: </strong>CAPG showed generally high expression in tumor group. The overall survival rate of the high-risk group was significantly lower than that of the low-risk group. Enrichment analysis indicated that CAPG is involved in immune-related pathways and is closely associated with the tumor microenvironment. CAPG expression levels were affected by abnormal DNA methylation and/or targeted miRNAs, infiltration levels and marker genes of various immune cells, thereby impacting immune response, ferroptosis, and patient prognosis. Ferroptosis analysis indicated that ALOX5 and VLDLR were the top CAPG-related ferroptosis markers; glutathione metabolism levels in tumor group were generally high, and decitabine was a ferroptosis inducer. CAPG-siRNA suppressed the cell proliferation and invasion, and markedly elevated the expression levels of immune-related genes IL8, TNF, TLR4 and the intracellular Fe<sup>2+</sup> levels. CAPG co-located with GPX4 in nucleus and co-regulated ferroptosis and metabolism in Ishikawa cells. Moreover, four chemotherapy drugs showed better sensitivity to UCEC patients in the low-risk cohort.</p><p><strong>Conclusions: </strong>CAPG may serve as a potential biomarker of UCEC owing to its role in modulating the immune response and ferroptosis, providing novel perspectives for combined immunotherapy of UCEC.</p>","PeriodicalId":12447,"journal":{"name":"Frontiers in Endocrinology","volume":"15 ","pages":"1452219"},"PeriodicalIF":3.9,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11588481/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142727590","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Multi-omic molecular characterization and diagnostic biomarkers for occult hepatitis B infection and HBsAg-positive hepatitis B infection. 隐性乙型肝炎感染和 HBsAg 阳性乙型肝炎感染的多组学分子特征和诊断生物标志物。
IF 3.9 2区 医学 Q2 ENDOCRINOLOGY & METABOLISM Pub Date : 2024-11-12 eCollection Date: 2024-01-01 DOI: 10.3389/fendo.2024.1409079
Xinyi Jiang, Jinyue Tian, Li Song, Jiao Meng, Zhenkun Yang, Weizhen Qiao, Jian Zou

Background: The pathological and physiological characteristics between HBsAg-positive HBV infection and occult hepatitis B infection (OBI) are currently unclear. This study aimed to explore the immune microenvironment in the peripheral circulation of OBI patients through integration of proteomic and metabolomic sequencing, and to identify molecular biomarkers for clinical diagnosis of HBsAg-positive HBV and OBI.

Methods: This research involved collection of plasma from 20 patients with OBI (negative for HBsAg but positive for HBV DNA, with HBV DNA levels < 200 IU/mL), 20 patients with HBsAg-positive HBV infection, and 10 healthy individuals. Mass spectrometry-based detection was used to analyze the proteome, while nuclear magnetic resonance spectroscopy was employed to study the metabolomic phenotypes. Differential molecule analysis, pathway enrichment and functional annotation, as well as weighted correlation network analysis (WGCNA), were conducted to uncover the characteristics of HBV-related liver disease. Prognostic biomarkers were identified using machine learning algorithms, and their validity was confirmed in a larger cohort using enzyme linked immunosorbent assay (ELISA).

Results: HBsAg-positive HBV individuals showed higher ALT levels (p=0.010) when compared to OBI patients. The influence of HBV infection on metabolic functions and inflammation was evident through the analysis of distinct metabolic pathways in HBsAg-positive HBV and OBI groups. Tissue tracing demonstrated a connection between Kupffer cells and HBsAg-positive HBV infection, as well as between hepatocytes and OBI. Immune profiling revealed the correlation between CD4 Tem cells, memory B cells and OBI, enabling a rapid response to infection reactivation through cytokine secretion and antibody production. A machine learning-constructed and significantly expressed molecule-based diagnostic model effectively differentiated HBsAg-positive and OBI groups (AUC values > 0.8). ELISA assay confirmed the elevation of FGB and FGG in OBI samples, suggesting their potential as biomarkers for distinguishing OBI from HBsAg-positive infection.

Conclusions: The immune microenvironment and metabolic status of HBsAg-positive HBV patients and OBI patients vary significantly. The machine learning-based diagnostic model described herein displayed impressive classification accuracy, presenting a non-invasive means of differentiating between OBI and HBsAg-positive HBV infections.

背景:目前尚不清楚HBsAg阳性HBV感染与隐匿性乙型肝炎感染(OBI)之间的病理和生理特点。本研究旨在通过整合蛋白质组学和代谢组学测序,探索 OBI 患者外周循环中的免疫微环境,并为临床诊断 HBsAg 阳性 HBV 和 OBI 找出分子生物标志物:该研究收集了 20 名 OBI 患者(HBsAg 阴性但 HBV DNA 阳性,HBV DNA 水平小于 200 IU/mL)、20 名 HBsAg 阳性的 HBV 感染患者和 10 名健康人的血浆。质谱检测用于分析蛋白质组,核磁共振光谱用于研究代谢组表型。通过差异分子分析、通路富集和功能注释以及加权相关网络分析(WGCNA),揭示了 HBV 相关肝病的特征。利用机器学习算法确定了预后生物标志物,并利用酶联免疫吸附试验(ELISA)在更大的队列中证实了这些生物标志物的有效性:结果:与 OBI 患者相比,HBsAg 阳性的 HBV 患者显示出更高的 ALT 水平(p=0.010)。通过分析 HBsAg 阳性 HBV 组和 OBI 组的不同代谢途径,可以明显看出 HBV 感染对代谢功能和炎症的影响。组织追踪显示,Kupffer 细胞与 HBsAg 阳性 HBV 感染之间存在联系,肝细胞与 OBI 之间也存在联系。免疫图谱显示了 CD4 Tem 细胞、记忆 B 细胞和 OBI 之间的相关性,通过细胞因子的分泌和抗体的产生对感染再激活做出快速反应。基于机器学习构建的显著表达分子诊断模型能有效区分 HBsAg 阳性组和 OBI 组(AUC 值大于 0.8)。ELISA检测证实了OBI样本中FGB和FGG的升高,表明它们有可能成为区分OBI和HBsAg阳性感染的生物标志物:结论:HBsAg 阳性的 HBV 患者和 OBI 患者的免疫微环境和代谢状态差异很大。本文描述的基于机器学习的诊断模型显示出令人印象深刻的分类准确性,是区分 OBI 和 HBsAg 阳性 HBV 感染的非侵入性方法。
{"title":"Multi-omic molecular characterization and diagnostic biomarkers for occult hepatitis B infection and HBsAg-positive hepatitis B infection.","authors":"Xinyi Jiang, Jinyue Tian, Li Song, Jiao Meng, Zhenkun Yang, Weizhen Qiao, Jian Zou","doi":"10.3389/fendo.2024.1409079","DOIUrl":"10.3389/fendo.2024.1409079","url":null,"abstract":"<p><strong>Background: </strong>The pathological and physiological characteristics between HBsAg-positive HBV infection and occult hepatitis B infection (OBI) are currently unclear. This study aimed to explore the immune microenvironment in the peripheral circulation of OBI patients through integration of proteomic and metabolomic sequencing, and to identify molecular biomarkers for clinical diagnosis of HBsAg-positive HBV and OBI.</p><p><strong>Methods: </strong>This research involved collection of plasma from 20 patients with OBI (negative for HBsAg but positive for HBV DNA, with HBV DNA levels < 200 IU/mL), 20 patients with HBsAg-positive HBV infection, and 10 healthy individuals. Mass spectrometry-based detection was used to analyze the proteome, while nuclear magnetic resonance spectroscopy was employed to study the metabolomic phenotypes. Differential molecule analysis, pathway enrichment and functional annotation, as well as weighted correlation network analysis (WGCNA), were conducted to uncover the characteristics of HBV-related liver disease. Prognostic biomarkers were identified using machine learning algorithms, and their validity was confirmed in a larger cohort using enzyme linked immunosorbent assay (ELISA).</p><p><strong>Results: </strong>HBsAg-positive HBV individuals showed higher ALT levels (<i>p</i>=0.010) when compared to OBI patients. The influence of HBV infection on metabolic functions and inflammation was evident through the analysis of distinct metabolic pathways in HBsAg-positive HBV and OBI groups. Tissue tracing demonstrated a connection between Kupffer cells and HBsAg-positive HBV infection, as well as between hepatocytes and OBI. Immune profiling revealed the correlation between CD4 Tem cells, memory B cells and OBI, enabling a rapid response to infection reactivation through cytokine secretion and antibody production. A machine learning-constructed and significantly expressed molecule-based diagnostic model effectively differentiated HBsAg-positive and OBI groups (AUC values > 0.8). ELISA assay confirmed the elevation of FGB and FGG in OBI samples, suggesting their potential as biomarkers for distinguishing OBI from HBsAg-positive infection.</p><p><strong>Conclusions: </strong>The immune microenvironment and metabolic status of HBsAg-positive HBV patients and OBI patients vary significantly. The machine learning-based diagnostic model described herein displayed impressive classification accuracy, presenting a non-invasive means of differentiating between OBI and HBsAg-positive HBV infections.</p>","PeriodicalId":12447,"journal":{"name":"Frontiers in Endocrinology","volume":"15 ","pages":"1409079"},"PeriodicalIF":3.9,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11588476/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142727591","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Frontiers in Endocrinology
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