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Oncolytic viral therapy as a novel potential solution for treatment of pancreatic cancer. 溶瘤病毒治疗作为治疗胰腺癌的一种新的潜在解决方案。
Q3 Medicine Pub Date : 2025-01-01 DOI: 10.22037/ghfbb.v18i1.3066
Piruz Shadbash, Seyed Masoud Hosseini, Sahel Abyar, Shahrzad Shoraka, Amir Ghaemi, Nosratollah Naderi, Seyed Reza Mohebbi

Pancreatic cancer (PC) remains one of the most formidable malignancies, with survival rates showing minimal improvement over the years despite progress in chemotherapy, targeted treatments, and radiation therapy. The development of targeted agents and chemotherapy for cancer treatment has only moderately influenced clinical results and has not significantly altered 5-year survival rates. However, with the rapid discovery of the genetic and molecular functions underlying PC, new opportunities for targeted therapies are emerging. One promising approach is oncolytic viral therapy, which has shown potential as a targeted agent for the treatment of pancreatic cancer. Based on the available evidence, oncolytic viral therapy appears to be a viable treatment option for pancreatic cancer. In the present narrative review, we explore oncolytic viruses in detail, and their potential applications in cancer therapy as a future alternative treatment are investigated.

胰腺癌(PC)仍然是最可怕的恶性肿瘤之一,尽管化疗、靶向治疗和放射治疗取得了进展,但多年来生存率的改善微乎其微。靶向药物和化疗的发展对癌症治疗的临床结果只有适度的影响,并没有显著改变5年生存率。然而,随着前列腺癌基因和分子功能的迅速发现,靶向治疗的新机会正在出现。一种很有希望的方法是溶瘤病毒疗法,它已经显示出作为治疗胰腺癌的靶向药物的潜力。根据现有证据,溶瘤病毒治疗似乎是胰腺癌的一种可行的治疗选择。在本文中,我们详细探讨了溶瘤病毒,并探讨了它们作为未来替代治疗方法在癌症治疗中的潜在应用。
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引用次数: 0
Variations in gut microbiota in celiac disease patients: a systematic review. 乳糜泻患者肠道菌群的变化:一项系统综述
Q3 Medicine Pub Date : 2025-01-01 DOI: 10.22037/ghfbb.v18i1.3024
Hasna Ait Said, Lahcen Elmoumou, Bouchra Rherissi, Nadia El Kadmiri

Aim: This review aims to summarize the characteristics of gut microbiota in celiac patients and assess its composition compared to healthy controls.

Background: The gut microbiota influences the regulation of host immunity. Accordingly, alterations in the intestinal microbiota, also known as dysbiosis, have been studied in various gastrointestinal disorders, including celiac disease.

Methods: We conducted a systematic review of available studies over the last decade (2013-2023). The comprehensive search was performed using various academic databases. The selected studies focused on the analysis of gut microbiota from duodenal and/or fecal samples and included both pediatric and adult populations.

Results: Twenty-two articles were included following PRISMA guidelines: nine on fecal microbiota, six on duodenal microbiota, and seven on both. The findings revealed significant differences in bacterial prevalence associated with celiac disease across 17 studies, with celiac patients showing altered microbial diversity characterized by an increase in pathogenic bacteria and a decrease in beneficial bacteria such as Bifidobacterium and Lactobacillus, compared to healthy controls. However, other studies showed no significant distinction between groups of children affected by celiac disease and control groups. Some articles also highlight the effect of a gluten-free diet on the composition of the gut microbiota.

Conclusion: Current data on the composition of the gut microbiome in patients with celiac disease is characterized by considerable heterogeneity and inconsistency. This highlights the need for a thorough and holistic approach to understand better these variations and their impact on the health of people with celiac disease.

目的:本综述旨在总结乳糜泻患者肠道菌群的特点,并与健康对照组比较其组成。背景:肠道菌群影响宿主免疫调节。因此,肠道微生物群的改变,也被称为生态失调,已经在各种胃肠道疾病中进行了研究,包括乳糜泻。方法:我们对过去十年(2013-2023)的现有研究进行了系统回顾。综合检索使用了各种学术数据库。选定的研究集中于分析来自十二指肠和/或粪便样本的肠道微生物群,包括儿科和成人人群。结果:22篇文章被纳入PRISMA指南:9篇关于粪便微生物群,6篇关于十二指肠微生物群,7篇关于两者。研究结果显示,在17项研究中,与乳糜泻相关的细菌患病率存在显著差异,与健康对照组相比,乳糜泻患者表现出微生物多样性的改变,其特征是致病菌增加,有益细菌(如双歧杆菌和乳杆菌)减少。然而,其他研究表明,受乳糜泻影响的儿童群体与对照组之间没有显著差异。一些文章还强调了无麸质饮食对肠道微生物群组成的影响。结论:目前关于乳糜泻患者肠道微生物组组成的数据具有相当大的异质性和不一致性。这突出了需要一个全面和全面的方法来更好地了解这些变化及其对乳糜泻患者健康的影响。
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引用次数: 0
Could serum uric acid levels be a biomarker for metabolic dysfunction-associated steatotic liver disease? 血清尿酸水平是否可以作为代谢功能障碍相关脂肪变性肝病的生物标志物?
Q3 Medicine Pub Date : 2025-01-01 Epub Date: 2025-08-26 DOI: 10.22037/ghfbb.v18i3.3033
Ömer Keskin, Ayşe Özdemir, Yusuf Üstün, Cenk Aypak

Aim: In this study, we investigated the relationship between serum uric acid (SUA) and metabolic dysfunction-associated steatotic liver disease (MASLD) in patients detected through abdominal ultrasound. The second aim was to determine if there were any gender differences.

Background: High SUA levels may contribute to the mechanisms underlying various metabolic disorders, including MASLD.

Methods: We conducted a retrospective study among patients older than 18 who had been admitted to a tertiary hospital's gastroenterology outpatient clinic for over two years. A total of 200 patients diagnosed with either Grade 1, 2, or 3 hepatosteatosis by ultrasound screening and 200 patients without hepatosteatosis were included in the study. Patients' demographic features, laboratory parameters, and detailed medical history were extracted from the hospital's medical records.

Results: The mean age of the 400 patients enrolled in the study was 47.92±0.78 years, and 70.25% were men. SUA (5.34 mg/dL ± 1.52 vs. 4.64 mg/dL ± 1.28, p=0.001), alanine aminotransferase (ALT) (26.55 U/L ± 23.82 vs. 19.57 U/L ± 20.81, p=0.002), aspartate aminotransferase (AST) (22.68 U/L ± 20.35 vs. 18.07 U/L ± 9.89, p=0.005), and glycosylated hemoglobin (HbA1c) (6.45% ± 1.69 vs. 5.76% ± 1.23, p=0.001) levels were higher in the MASLD group. In the MASLD group, HbA1c, AST, and ALT were significantly higher in the Grade 2-3 group than in the Grade 1 (p=0.038, p=0.038, p=0.001, respectively).

Conclusion: Elevated SUA levels are strongly linked to MASLD, particularly in males. Ease of measurement and low cost suggest that SUA could serve as a non-invasive biomarker for MASLD detection in at-risk groups.

目的:在本研究中,我们探讨血清尿酸(SUA)与腹部超声检测患者代谢功能障碍相关脂肪变性肝病(MASLD)的关系。第二个目的是确定是否存在性别差异。背景:高SUA水平可能与包括MASLD在内的各种代谢紊乱的机制有关。方法:我们对在某三级医院消化科门诊就诊两年以上的18岁以上患者进行了回顾性研究。通过超声筛查诊断为1级、2级或3级肝骨增生症的患者共200例,无肝骨增生症的患者共200例纳入研究。从医院的医疗记录中提取患者的人口统计学特征、实验室参数和详细的病史。结果:纳入研究的400例患者平均年龄为47.92±0.78岁,男性占70.25%。MASLD组患者SUA (5.34 mg/dL±1.52 vs. 4.64 mg/dL±1.28,p=0.001)、丙氨酸转氨酶(ALT) (26.55 U/L±23.82 vs. 19.57 U/L±20.81,p=0.002)、天冬氨酸转氨酶(AST) (22.68 U/L±20.35 vs. 18.07 U/L±9.89,p=0.005)、糖化血红蛋白(HbA1c)(6.45%±1.69 vs. 5.76%±1.23,p=0.001)水平较高。在MASLD组中,2-3级组的HbA1c、AST和ALT明显高于1级组(p=0.038, p=0.038, p=0.001)。结论:SUA水平升高与MASLD密切相关,尤其是在男性中。易于测量和低成本表明SUA可以作为一种无创生物标志物用于高危人群的MASLD检测。
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引用次数: 0
Algorithmic approach for endoscopic management of colorectal polyps: an up-to-date review. 内镜下处理结直肠息肉的算法方法:最新综述。
Q3 Medicine Pub Date : 2025-01-01 DOI: 10.22037/ghfbb.v18i1.3085
Amir Sadeghi, Ali Yousefian Astaneh, Erfan Arabpour, Mohammad Reza Zali

With the growing incidence of colorectal cancer worldwide, mainly due to increased early detection in screening programs, usage of endoscopic techniques for management of colorectal lesions have been gaining progressive attention. Each year, more advanced endoscopic techniques come to practice and old ones find technical enhancements. By reviewing guidelines, randomized controlled trials, meta-analyses, and original research, we aim to establish an evidence-based approach for selecting the optimal endoscopic method based on the polyp size, morphology, and classification. We critically analyze the advantages, limitations, and potential complications associated with each technique, providing a comprehensive overview for clinicians and suggest areas which may yet need further studies to be conducted. Our comprehensive review can provide a framework that will help clinicians choose an approach most suitable for their patients. This review attempts to contribute to the optimization of endoscopic management in colorectal polyps, with eventual improvement in patient outcomes.

随着世界范围内结直肠癌发病率的增长,主要是由于筛查项目早期发现的增加,内镜技术在结直肠癌病变管理中的应用越来越受到关注。每年都有更先进的内窥镜技术出现,而旧的内窥镜技术也得到了改进。通过回顾指南、随机对照试验、荟萃分析和原始研究,我们旨在建立一种基于息肉大小、形态和分类选择最佳内镜方法的循证方法。我们批判性地分析了每种技术的优点、局限性和潜在的并发症,为临床医生提供了全面的概述,并提出了可能需要进一步研究的领域。我们的综合评价可以提供一个框架,帮助临床医生选择最适合他们的病人的方法。本综述旨在优化内镜治疗结肠直肠息肉的方法,最终改善患者的预后。
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引用次数: 0
Global and regional trends in under-five diarrheal disease burden: impact of human development index and geographic disparities, 1990-2021. 1990-2021年五岁以下儿童腹泻疾病负担的全球和区域趋势:人类发展指数和地理差异的影响
Q3 Medicine Pub Date : 2025-01-01 DOI: 10.22037/ghfbb.v18i2.3158
Mehdi Azizmohammad Looha, Ali Saberi Shahrbabaki, Azin Mohammadpoor, Mahmoud Zamani, Zahra Sadeghloo, Melika Jameie, Hanieh Mousavi, Seyede Roxane Pooresmaeil Niaki, Hossein Mohebbi, Naghmeh Asadimanesh, Fatemeh Norouzi, Sepideh Banar, Matin Jalalinejad, Maedeh Yousefi, Sofia Shahreki Mojahed, Forough Masheghati, Mehrnoosh Ghalandarlaki, Alireza Bahadorimonfared

Aim: In this study, global and regional trends between 1990 and 2021 were examined by sex, level of development, and geography, and projected to 2025.

Background: Diarrheal disease continues to be a leading cause of morbidity and mortality in children under the age of five (U5).

Methods: We assessed GBD 2021 data for U5 children in 204 countries, 21 regions, and 7 super-regions with joinpoint regression to analyze time trends, a hybrid ARIMA-ETS-ANN model to project prevalence and mortality until 2025, and longitudinal multilevel modeling to determine the effect of development level. Spatial clustering in 1990 and 2021 was assessed with Local Moran's I.

Results: In 2021, the global prevalence and mortality rates of diarrheal disease among children under five were 885.07 and 51.72 per 100,000 population, respectively. Between 1990 and 2021, global U5 mortality decreased by 80.4%, and prevalence by 71.8%. The heaviest burden remained in Sub-Saharan Africa (SSA) and South Asia (SA), though all super-regions experienced statistically significant decreases. Joinpoint regression across the entire interval (1990-2021) revealed significant overall reductions in mortality (AAPC -5.15; 95% CI: -5.19, -5.10) and prevalence (AAPC -3.98; 95% CI: -4.03, -3.94). Hybrid forecasts predict ongoing decreases through 2025, with prevalence reaching 631.3 and mortality 36.6 per 100,000 population worldwide. Multilevel models revealed steeper annual reductions in low- and medium-Human Development Index (HDI) nations, corroborated by significant time-HDI interaction terms (β=79.76 for prevalence; β=7.50 for mortality; both p<0.001), although such countries had a persisting higher absolute burden. Spatial analysis revealed enduring hotspots in SSA and SA in both 1990 and 2021, and the formation of new clusters in several high-income countries. Coldspots occurred primarily in high-income and island nations.

Conclusion: Significant global advancements have lessened the burden of diarrheal disease in U5 children; yet, ongoing disparities attributed to unsafe water, poor sanitation and hygiene, undernutrition, and low maternal education underscore the necessity for combined water, sanitation, and hygiene interventions, rotavirus immunization, and community-based health education in high-risk areas.

目的:在本研究中,按性别、发展水平和地理检查了1990年至2021年的全球和区域趋势,并预测了到2025年的趋势。背景:腹泻病仍然是5岁以下儿童(U5)发病和死亡的主要原因。方法:我们评估了204个国家、21个地区和7个超级地区的U5儿童GBD 2021数据,采用联合点回归分析时间趋势,采用ARIMA-ETS-ANN混合模型预测2025年之前的患病率和死亡率,并采用纵向多层模型确定发展水平的影响。使用Local Moran’s i评估1990年和2021年的空间聚类。结果:2021年,全球5岁以下儿童腹泻患病率和死亡率分别为885.07 / 10万人和51.72 / 10万人。1990年至2021年期间,全球U5死亡率下降了80.4%,患病率下降了71.8%。最重的负担仍然在撒哈拉以南非洲(SSA)和南亚(SA),尽管所有超级区域都经历了统计上显著的下降。整个区间(1990-2021)的连接点回归显示,死亡率(AAPC -5.15; 95% CI: -5.19, -5.10)和患病率(AAPC -3.98; 95% CI: -4.03, -3.94)总体上显著降低。混合预测预测到2025年将持续下降,全球患病率达到631.3,死亡率为36.6 / 10万人。多水平模型显示,低、中等人类发展指数(HDI)国家的年下降幅度更大,这一点得到了显著的时间-HDI相互作用项(患病率β=79.76,死亡率β=7.50)的证实。然而,由于不安全的水、恶劣的环境卫生和个人卫生、营养不良和孕产妇教育水平低而造成的持续差异突出表明,有必要在高风险地区采取综合的水、环境卫生和个人卫生干预措施、轮状病毒免疫和基于社区的健康教育。
{"title":"Global and regional trends in under-five diarrheal disease burden: impact of human development index and geographic disparities, 1990-2021.","authors":"Mehdi Azizmohammad Looha, Ali Saberi Shahrbabaki, Azin Mohammadpoor, Mahmoud Zamani, Zahra Sadeghloo, Melika Jameie, Hanieh Mousavi, Seyede Roxane Pooresmaeil Niaki, Hossein Mohebbi, Naghmeh Asadimanesh, Fatemeh Norouzi, Sepideh Banar, Matin Jalalinejad, Maedeh Yousefi, Sofia Shahreki Mojahed, Forough Masheghati, Mehrnoosh Ghalandarlaki, Alireza Bahadorimonfared","doi":"10.22037/ghfbb.v18i2.3158","DOIUrl":"10.22037/ghfbb.v18i2.3158","url":null,"abstract":"<p><strong>Aim: </strong>In this study, global and regional trends between 1990 and 2021 were examined by sex, level of development, and geography, and projected to 2025.</p><p><strong>Background: </strong>Diarrheal disease continues to be a leading cause of morbidity and mortality in children under the age of five (U5).</p><p><strong>Methods: </strong>We assessed GBD 2021 data for U5 children in 204 countries, 21 regions, and 7 super-regions with joinpoint regression to analyze time trends, a hybrid ARIMA-ETS-ANN model to project prevalence and mortality until 2025, and longitudinal multilevel modeling to determine the effect of development level. Spatial clustering in 1990 and 2021 was assessed with Local Moran's I.</p><p><strong>Results: </strong>In 2021, the global prevalence and mortality rates of diarrheal disease among children under five were 885.07 and 51.72 per 100,000 population, respectively. Between 1990 and 2021, global U5 mortality decreased by 80.4%, and prevalence by 71.8%. The heaviest burden remained in Sub-Saharan Africa (SSA) and South Asia (SA), though all super-regions experienced statistically significant decreases. Joinpoint regression across the entire interval (1990-2021) revealed significant overall reductions in mortality (AAPC -5.15; 95% CI: -5.19, -5.10) and prevalence (AAPC -3.98; 95% CI: -4.03, -3.94). Hybrid forecasts predict ongoing decreases through 2025, with prevalence reaching 631.3 and mortality 36.6 per 100,000 population worldwide. Multilevel models revealed steeper annual reductions in low- and medium-Human Development Index (HDI) nations, corroborated by significant time-HDI interaction terms (β=79.76 for prevalence; β=7.50 for mortality; both p<0.001), although such countries had a persisting higher absolute burden. Spatial analysis revealed enduring hotspots in SSA and SA in both 1990 and 2021, and the formation of new clusters in several high-income countries. Coldspots occurred primarily in high-income and island nations.</p><p><strong>Conclusion: </strong>Significant global advancements have lessened the burden of diarrheal disease in U5 children; yet, ongoing disparities attributed to unsafe water, poor sanitation and hygiene, undernutrition, and low maternal education underscore the necessity for combined water, sanitation, and hygiene interventions, rotavirus immunization, and community-based health education in high-risk areas.</p>","PeriodicalId":12636,"journal":{"name":"Gastroenterology and Hepatology From Bed to Bench","volume":"18 2","pages":"177-195"},"PeriodicalIF":0.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12421937/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145039938","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Efficacy and safety of sphingosine-1-phosphate receptor modulators in the management of inflammatory bowel disease: a systematic review and meta-analysis. 鞘氨醇-1-磷酸受体调节剂治疗炎症性肠病的疗效和安全性:一项系统综述和荟萃分析
Q3 Medicine Pub Date : 2025-01-01 DOI: 10.22037/ghfbb.v18i2.3134
Darmadi Darmadi, Dina Aprillia Ariestine, Herwindo Ahmad, Yan Indra Fajar Sitepu

Aim: To evaluate the efficacy and safety of sphingosine-1-phosphate (S1P) receptor modulators in treating ulcerative colitis (UC) and Crohn's disease (CD).

Background: Inflammatory Bowel Disease (IBD) is a chronic immune-mediated condition that remains challenging to manage. S1P receptor modulators offer a novel therapeutic approach by targeting immune cell trafficking, potentially improving disease outcomes.

Methods: A systematic review and meta-analysis were conducted by searching PubMed, Scopus, and Cochrane Library major electronic databases for randomized controlled trials (RCTs) investigating S1P receptor modulators in IBD. Clinical outcomes assessed included clinical remission, clinical response, endoscopic improvement, histologic remission, and serious adverse events. Pooled odds ratios (OR) with 95% confidence intervals (CI) were calculated using a fixed-effects model.

Results: Seven RCTs with a total of 2,597 patients were included. S1P receptor modulators significantly improved clinical remission (OR = 1.49, 95% CI: 1.21-1.84, p < 0.001), histologic remission (OR = 1.74, 95% CI: 1.31-2.31, p < 0.001), endoscopic improvement (OR = 1.58, 95% CI: 1.23-2.04, p < 0.001), and clinical response (OR = 1.27, 95% CI: 1.05-1.54, p = 0.01). The risk of serious adverse events did not significantly differ between treatment and placebo groups (OR = 1.28, 95% CI: 0.92-1.80, p = 0.14), suggesting a favorable safety profile.

Conclusion: This meta-analysis supports S1P receptor modulators, particularly ozanimod and etrasimod, as effective and safe treatments for UC. Further studies are needed to assess long-term safety and direct comparisons with existing biologic therapies.

目的:评价鞘氨醇-1-磷酸(S1P)受体调节剂治疗溃疡性结肠炎(UC)和克罗恩病(CD)的疗效和安全性。背景:炎症性肠病(IBD)是一种慢性免疫介导的疾病,仍然具有挑战性。S1P受体调节剂通过靶向免疫细胞运输提供了一种新的治疗方法,可能改善疾病的预后。方法:通过检索PubMed、Scopus和Cochrane图书馆主要电子数据库,对研究IBD中S1P受体调节剂的随机对照试验(rct)进行系统综述和荟萃分析。评估的临床结果包括临床缓解、临床反应、内镜改善、组织学缓解和严重不良事件。使用固定效应模型计算合并优势比(OR)和95%置信区间(CI)。结果:纳入7项随机对照试验,共2597例患者。S1P受体调节剂显著改善临床缓解(OR = 1.49, 95% CI: 1.21-1.84, p < 0.001)、组织学缓解(OR = 1.74, 95% CI: 1.31-2.31, p < 0.001)、内镜改善(OR = 1.58, 95% CI: 1.23-2.04, p < 0.001)和临床反应(OR = 1.27, 95% CI: 1.05-1.54, p = 0.01)。严重不良事件的风险在治疗组和安慰剂组之间没有显著差异(OR = 1.28, 95% CI: 0.92-1.80, p = 0.14),表明具有良好的安全性。结论:该荟萃分析支持S1P受体调节剂,特别是ozanimod和etrasimod是UC的有效和安全的治疗方法。需要进一步的研究来评估长期安全性和与现有生物疗法的直接比较。
{"title":"Efficacy and safety of sphingosine-1-phosphate receptor modulators in the management of inflammatory bowel disease: a systematic review and meta-analysis.","authors":"Darmadi Darmadi, Dina Aprillia Ariestine, Herwindo Ahmad, Yan Indra Fajar Sitepu","doi":"10.22037/ghfbb.v18i2.3134","DOIUrl":"10.22037/ghfbb.v18i2.3134","url":null,"abstract":"<p><strong>Aim: </strong>To evaluate the efficacy and safety of sphingosine-1-phosphate (S1P) receptor modulators in treating ulcerative colitis (UC) and Crohn's disease (CD).</p><p><strong>Background: </strong>Inflammatory Bowel Disease (IBD) is a chronic immune-mediated condition that remains challenging to manage. S1P receptor modulators offer a novel therapeutic approach by targeting immune cell trafficking, potentially improving disease outcomes.</p><p><strong>Methods: </strong>A systematic review and meta-analysis were conducted by searching PubMed, Scopus, and Cochrane Library major electronic databases for randomized controlled trials (RCTs) investigating S1P receptor modulators in IBD. Clinical outcomes assessed included clinical remission, clinical response, endoscopic improvement, histologic remission, and serious adverse events. Pooled odds ratios (OR) with 95% confidence intervals (CI) were calculated using a fixed-effects model.</p><p><strong>Results: </strong>Seven RCTs with a total of 2,597 patients were included. S1P receptor modulators significantly improved clinical remission (OR = 1.49, 95% CI: 1.21-1.84, p < 0.001), histologic remission (OR = 1.74, 95% CI: 1.31-2.31, p < 0.001), endoscopic improvement (OR = 1.58, 95% CI: 1.23-2.04, p < 0.001), and clinical response (OR = 1.27, 95% CI: 1.05-1.54, p = 0.01). The risk of serious adverse events did not significantly differ between treatment and placebo groups (OR = 1.28, 95% CI: 0.92-1.80, p = 0.14), suggesting a favorable safety profile.</p><p><strong>Conclusion: </strong>This meta-analysis supports S1P receptor modulators, particularly ozanimod and etrasimod, as effective and safe treatments for UC. Further studies are needed to assess long-term safety and direct comparisons with existing biologic therapies.</p>","PeriodicalId":12636,"journal":{"name":"Gastroenterology and Hepatology From Bed to Bench","volume":"18 2","pages":"120-131"},"PeriodicalIF":0.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12421927/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145039984","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Design and optimization of a multiplex real-time PCR assay for detection of Hepatitis C virus (HCV), Human immunodeficiency virus-1 (HIV-1) and Human hepegivirus-1 (HHpgV-1). 丙型肝炎病毒(HCV)、人类免疫缺陷病毒-1 (HIV-1)和人类肝炎病毒-1 (HHpgV-1)多重实时PCR检测方法的设计与优化
Q3 Medicine Pub Date : 2025-01-01 Epub Date: 2025-08-26 DOI: 10.22037/ghfbb.v18i3.3197
Paria Pirasteh, Seyed Reza Mohebbi, Seyed Masoud Hosseini, Shabnam Kazemian, Amir Ghaemi, Abolfazl Fateh, Mohammad Reza Zali

Aim: The objective of this study was to develop a real-time PCR method to detect hepatitis C virus (HCV), human immunodeficiency virus-1 (HIV-1), and also recently discovered human hepegivirus-1 (HHpgV-1) through melting curve analysis using SYBR Green dye in a single reaction.

Background: It is estimated that chronic viral infections affect millions of people worldwide, and a significant number of these individuals are unaware of their infection. In addition, infection with newly discovered and emerging viruses may put public health at potential risks. Precise and early detection is a primary and important task for controlling infections and helping patients.

Methods: A set of specific primers were designed for detection of HCV, HIV-1, and HHpgV-1 in a single tube. The real-time polymerase chain reaction was performed and melt curves were analyzed. Specificity was assessed by cross-reaction tests with other common blood-borne pathogens. The established assay was evaluated for the detection of viruses in clinical samples.

Results: The three viruses were clearly distinguished by their respective melting temperature values. The detection limits of this assay were 102 copies/ml for each virus. The clinical evaluation of this assay was demonstrated by analyzing 134 patients' serum samples. The specificity of the developed assay considered as 100%.

Conclusion: The developed multiplex real-time PCR based on SYBR Green dye is a well-suited detection assay of single or co-infections of HCV, HIV, and HHpgV-1 in clinical and research laboratories. It can be used as a cost-effective, rapid tool for routine diagnostic in-house tests.

目的:利用SYBR绿染料,建立一种实时PCR检测丙型肝炎病毒(HCV)、人类免疫缺陷病毒-1 (HIV-1)和新近发现的人类肝炎病毒-1 (HHpgV-1)的方法。背景:据估计,全世界有数百万人受到慢性病毒感染,其中很大一部分人并没有意识到自己受到了感染。此外,感染新发现和新出现的病毒可能使公共卫生面临潜在风险。准确和早期发现是控制感染和帮助患者的首要和重要任务。方法:设计一套HCV、HIV-1和HHpgV-1单管特异性引物。进行实时聚合酶链反应,分析熔体曲线。通过与其他常见血源性病原体的交叉反应试验评估特异性。对所建立的检测方法在临床样品中的病毒检测效果进行了评价。结果:三种病毒可通过各自的熔点值进行明显区分。每种病毒的检测限为102拷贝/ml。通过分析134例患者的血清样本,证明了该方法的临床评价。所开发的检测方法的特异性被认为是100%。结论:建立的基于SYBR绿染料的多重实时荧光定量PCR是一种适合临床和研究实验室检测HCV、HIV和HHpgV-1单一或合并感染的方法。它可以作为一种具有成本效益的快速工具,用于常规诊断内部测试。
{"title":"Design and optimization of a multiplex real-time PCR assay for detection of Hepatitis C virus (HCV), Human immunodeficiency virus-1 (HIV-1) and Human hepegivirus-1 (HHpgV-1).","authors":"Paria Pirasteh, Seyed Reza Mohebbi, Seyed Masoud Hosseini, Shabnam Kazemian, Amir Ghaemi, Abolfazl Fateh, Mohammad Reza Zali","doi":"10.22037/ghfbb.v18i3.3197","DOIUrl":"10.22037/ghfbb.v18i3.3197","url":null,"abstract":"<p><strong>Aim: </strong>The objective of this study was to develop a real-time PCR method to detect hepatitis C virus (HCV), human immunodeficiency virus-1 (HIV-1), and also recently discovered human hepegivirus-1 (HHpgV-1) through melting curve analysis using SYBR Green dye in a single reaction.</p><p><strong>Background: </strong>It is estimated that chronic viral infections affect millions of people worldwide, and a significant number of these individuals are unaware of their infection. In addition, infection with newly discovered and emerging viruses may put public health at potential risks. Precise and early detection is a primary and important task for controlling infections and helping patients.</p><p><strong>Methods: </strong>A set of specific primers were designed for detection of HCV, HIV-1, and HHpgV-1 in a single tube. The real-time polymerase chain reaction was performed and melt curves were analyzed. Specificity was assessed by cross-reaction tests with other common blood-borne pathogens. The established assay was evaluated for the detection of viruses in clinical samples.</p><p><strong>Results: </strong>The three viruses were clearly distinguished by their respective melting temperature values. The detection limits of this assay were 10<sup>2</sup> copies/ml for each virus. The clinical evaluation of this assay was demonstrated by analyzing 134 patients' serum samples. The specificity of the developed assay considered as 100%.</p><p><strong>Conclusion: </strong>The developed multiplex real-time PCR based on SYBR Green dye is a well-suited detection assay of single or co-infections of HCV, HIV, and HHpgV-1 in clinical and research laboratories. It can be used as a cost-effective, rapid tool for routine diagnostic in-house tests.</p>","PeriodicalId":12636,"journal":{"name":"Gastroenterology and Hepatology From Bed to Bench","volume":"18 3","pages":"353-360"},"PeriodicalIF":0.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12535783/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145336765","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development of a risk score for colorectal cancer screening. 结直肠癌筛查风险评分的发展。
Q3 Medicine Pub Date : 2025-01-01 Epub Date: 2025-08-26 DOI: 10.22037/ghfbb.v18i3.3140
Elham Maserat, Amir Sadeghi, Pardis Ketabi Moghadam, Mohamad Amin Pourhoseingholi

Aim: The aim of this study was to develop a simple and reliable scoring system for colorectal cancer risk assessment considering the effectiveness of different screening options.

Background: Colorectal cancer (CRC) is one of the leading causes of cancer-related mortality worldwide. As a preventable disease, accurate risk assessment plays a critical role in early detection and prevention strategies.

Methods: This study analyzed data from 3,465 individuals, including patients, first-degree, second-degree, and third-degree relatives of patients, and volunteers participating in a national CRC screening program. The dataset reflects nine years of prevention efforts targeting at-risk populations. Machine learning algorithms-Logistic Regression, Naïve Bayes, Neural Networks, Random Forest, and Support Vector Machines (SVM)-were applied to the data. Model performance was evaluated using cross-validation, ROC curves, F1 score, classification accuracy (CA), and overall accuracy metrics.

Results: Of the 3,465 participants, 2,240 were diagnosed with colorectal cancer, 60 were relatives of affected patients, and 1,086 were non-patient relatives. Among CRC patients, 1,979 were over the age of 40. Logistic Regression and Naïve Bayes achieved the highest AUC values (0.910 and 0.907, respectively), with corresponding accuracies of 84.5% and 82.8%. Logistic Regression demonstrated the highest overall accuracy. The proposed scoring system incorporated variables such as age, sex, diabetes, inflammatory bowel disease (IBD), smoking, alcohol consumption, tobacco use, BMI, family history, and five key symptoms: rectal bleeding, abdominal pain, unintended weight loss, changes in bowel habits, and anemia. The highest score was assigned to individuals over 60 years of age, while a score of 2 was allocated for a family history involving more than two affected relatives.

Conclusion: A scoring system based on easily measurable variables offers a practical and efficient tool for widespread clinical use. Such systems can assist healthcare professionals in streamlining risk assessment and improving early identification of high-risk individuals.

目的:本研究的目的是考虑不同筛查方案的有效性,开发一种简单可靠的结直肠癌风险评估评分系统。背景:结直肠癌(CRC)是全球癌症相关死亡的主要原因之一。作为一种可预防的疾病,准确的风险评估在早期发现和预防战略中起着至关重要的作用。方法:本研究分析了来自3,465个人的数据,包括患者、患者的一级、二级和三级亲属,以及参加国家CRC筛查计划的志愿者。该数据集反映了9年来针对高危人群的预防工作。机器学习算法-逻辑回归,Naïve贝叶斯,神经网络,随机森林和支持向量机(SVM)-应用于数据。采用交叉验证、ROC曲线、F1评分、分类精度(CA)和总体精度指标评估模型性能。结果:在3465名参与者中,2240人被诊断为结直肠癌,60人是受影响患者的亲属,1086人是非患者亲属。在结直肠癌患者中,年龄在40岁以上的有1979例。Logistic回归和Naïve Bayes的AUC值最高,分别为0.910和0.907,准确率分别为84.5%和82.8%。逻辑回归显示出最高的总体准确性。提出的评分系统纳入了年龄、性别、糖尿病、炎症性肠病(IBD)、吸烟、饮酒、吸烟、BMI、家族史等变量,以及五个关键症状:直肠出血、腹痛、意外体重减轻、排便习惯改变和贫血。60岁以上的人得分最高,而有两个以上患病亲属的家族史的人得分为2分。结论:基于易测量变量的评分系统为临床广泛应用提供了一种实用有效的工具。这样的系统可以帮助医疗保健专业人员简化风险评估和提高早期识别高风险个体。
{"title":"Development of a risk score for colorectal cancer screening.","authors":"Elham Maserat, Amir Sadeghi, Pardis Ketabi Moghadam, Mohamad Amin Pourhoseingholi","doi":"10.22037/ghfbb.v18i3.3140","DOIUrl":"10.22037/ghfbb.v18i3.3140","url":null,"abstract":"<p><strong>Aim: </strong>The aim of this study was to develop a simple and reliable scoring system for colorectal cancer risk assessment considering the effectiveness of different screening options.</p><p><strong>Background: </strong>Colorectal cancer (CRC) is one of the leading causes of cancer-related mortality worldwide. As a preventable disease, accurate risk assessment plays a critical role in early detection and prevention strategies.</p><p><strong>Methods: </strong>This study analyzed data from 3,465 individuals, including patients, first-degree, second-degree, and third-degree relatives of patients, and volunteers participating in a national CRC screening program. The dataset reflects nine years of prevention efforts targeting at-risk populations. Machine learning algorithms-Logistic Regression, Naïve Bayes, Neural Networks, Random Forest, and Support Vector Machines (SVM)-were applied to the data. Model performance was evaluated using cross-validation, ROC curves, F1 score, classification accuracy (CA), and overall accuracy metrics.</p><p><strong>Results: </strong>Of the 3,465 participants, 2,240 were diagnosed with colorectal cancer, 60 were relatives of affected patients, and 1,086 were non-patient relatives. Among CRC patients, 1,979 were over the age of 40. Logistic Regression and Naïve Bayes achieved the highest AUC values (0.910 and 0.907, respectively), with corresponding accuracies of 84.5% and 82.8%. Logistic Regression demonstrated the highest overall accuracy. The proposed scoring system incorporated variables such as age, sex, diabetes, inflammatory bowel disease (IBD), smoking, alcohol consumption, tobacco use, BMI, family history, and five key symptoms: rectal bleeding, abdominal pain, unintended weight loss, changes in bowel habits, and anemia. The highest score was assigned to individuals over 60 years of age, while a score of 2 was allocated for a family history involving more than two affected relatives.</p><p><strong>Conclusion: </strong>A scoring system based on easily measurable variables offers a practical and efficient tool for widespread clinical use. Such systems can assist healthcare professionals in streamlining risk assessment and improving early identification of high-risk individuals.</p>","PeriodicalId":12636,"journal":{"name":"Gastroenterology and Hepatology From Bed to Bench","volume":"18 3","pages":"333-341"},"PeriodicalIF":0.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12535784/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145336848","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Psychological determinants of irritable bowel syndrome and its impact on quality of life: a machine learning approaches. 肠易激综合征的心理决定因素及其对生活质量的影响:机器学习方法。
Q3 Medicine Pub Date : 2025-01-01 DOI: 10.22037/ghfbb.v18i1.3082
Elham Saeedinia, Hamid Poursharifi, Fereshte Momeni, Mohsen Vahedi, Amir Sadeghi, Mansour Abdi, Ramin Ghahremani

Aim: This study examined the associations between psychosocial factors, Irritable bowel syndrome (IBS) diagnosis, and quality of life (QOL) in both control and IBS groups. Additionally, we explored the potential influence of psychosocial factors on the onset of IBS and developed a machine-learning model for IBS prediction.

Background: IBS is a prevalent gastrointestinal disorder, with various factors predicting its severity and associated symptoms.

Methods: Through convenience sampling, a cross-sectional study recruited participants diagnosed with IBS (n=134) and healthy controls (n=150) from Arak Gastroenterology Clinics. Linear regression assessed the impact of psychosocial factors on IBS symptom severity and QOL. Logistic regression analyzed the association of these factors with IBS onset. Machine learning algorithms were used to predict IBS based on psychosocial features. Instruments include IBS-SSS, IBS-QOL, Toronto Alexithymia Scale (TAS-20), Visceral Sensitivity Index (VSI), and Pain Catastrophe Scale (PCS).

Results: A total of 284 participants (61.27% females) were recruited in the study, with a mean age of 36.48±10.75 years. Compared to controls, IBS patients exhibited significantly higher scores on measures of pain catastrophizing scale (PCS, 40.95 vs. 27.73), somatization (13.91 vs. 6.49), and alexithymia (60.23 vs. 54.71) as well as lower VSI (40.54 vs. 72.10). For those with IBS, only difficulty identifying feelings and somatization remained associated with worse symptoms, while VSI presented an inverse correlation. Psychological factors were inversely related to QOL. Elevated levels of alexithymia (OR 1.06; 95% CI 0.48, 1.63), somatization (OR 1.80; 95%CI 1.12, 2.48), and PCS (OR 1.70; 95% CI 1.30, 2.10) were associated with a higher chance of developing IBS, while higher VSI (OR -1.65; 95% CI -1.89, -1.42) was protective. Among machine learning models, logistic regression based on these factors (excluding alexithymia) and age achieved good performance (AUC: 0.86, 95% CI: 0.78-0.94; Accuracy: 0.83, 95% CI: 0.73-0.90) in predicting IBS onset.

Conclusion: Psychological factors were linked to worse IBS symptoms and quality of life. A machine learning model for IBS prediction presented promising results.

目的:本研究探讨了对照组和IBS组的心理社会因素、肠易激综合征(IBS)诊断和生活质量(QOL)之间的关系。此外,我们探索了心理社会因素对肠易激综合征发病的潜在影响,并开发了一种用于肠易激综合征预测的机器学习模型。背景:肠易激综合征是一种常见的胃肠疾病,多种因素可预测其严重程度和相关症状。方法:通过方便抽样,横断面研究从Arak胃肠病学诊所招募了诊断为IBS的参与者(n=134)和健康对照组(n=150)。线性回归评估心理社会因素对IBS症状严重程度和生活质量的影响。Logistic回归分析这些因素与肠易激综合征发病的关系。机器学习算法用于基于心理社会特征预测肠易激综合征。仪器包括IBS-SSS、IBS-QOL、多伦多述情障碍量表(TAS-20)、内脏敏感性指数(VSI)、疼痛突变量表(PCS)。结果:共纳入研究对象284人,女性61.27%,平均年龄36.48±10.75岁。与对照组相比,IBS患者在疼痛灾难量表(PCS, 40.95 vs. 27.73)、躯体化(13.91 vs. 6.49)和述情障碍(60.23 vs. 54.71)方面的得分明显更高,VSI (40.54 vs. 72.10)也较低。对于肠易激综合征患者,只有难以识别感觉和躯体化与更严重的症状有关,而VSI呈负相关。心理因素与生活质量呈负相关。述情障碍水平升高(OR 1.06;95% CI 0.48, 1.63),躯体化(OR 1.80;95%CI 1.12, 2.48)和PCS (OR 1.70;95% CI 1.30, 2.10)与发生IBS的几率较高相关,而较高的VSI (OR -1.65;95% CI(-1.89, -1.42)具有保护作用。在机器学习模型中,基于这些因素(不包括述情障碍)和年龄的逻辑回归取得了良好的表现(AUC: 0.86, 95% CI: 0.78-0.94;预测肠易激综合征发病的准确度:0.83,95% CI: 0.73-0.90)。结论:心理因素与IBS症状恶化和生活质量有关。一种用于IBS预测的机器学习模型呈现出令人鼓舞的结果。
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引用次数: 0
Microvillus inclusion disease: a short review of literature. 微绒毛包涵性疾病:文献综述。
Q3 Medicine Pub Date : 2025-01-01 DOI: 10.22037/ghfbb.v18i1.3069
Arya Nair Kovilveettil

Microvillus inclusion disease (MVD) is a rare autosomal recessive disease that was first discovered in 1978 by Davidson et al., with significant mortality and morbidity within the first year of life. It presents mainly with abdominal symptoms like diarrhoea, abdominal distension, vomiting electrolyte imbalance. Sometimes, depending on the genetic mutation involved, the phenotypic manifestation can vary. Certain genetic mutations are associated with cholestasis, dilated bowel loops, and metabolic acidosis, whereas some present with nystagmus and reduced visual acuity. Electron microscopy of the duodenal biopsy sample is used as a diagnostic tool. Absence or shortening of apical microvilli with microvillus inclusion bodies in mature enterocytes, which are pathognomonic to MVD alongside periodic acid Schiff (PAS)-positive granules or vesicles in the immature enterocytes.

微绒毛包涵性疾病(Microvillus inclusion disease, MVD)是一种罕见的常染色体隐性遗传病,由Davidson等人于1978年首次发现,在出生后1年内有显著的死亡率和发病率。主要表现为腹泻、腹胀、呕吐、电解质紊乱等腹部症状。有时,取决于所涉及的基因突变,表型表现可能有所不同。某些基因突变与胆汁淤积、肠袢扩张和代谢性酸中毒有关,而另一些则表现为眼球震颤和视力下降。十二指肠活检样本的电子显微镜被用作诊断工具。成熟肠细胞中含有微绒毛包涵体的根尖微绒毛缺失或缩短,与未成熟肠细胞中的周期性酸希夫(PAS)阳性颗粒或囊泡一起,是MVD的典型病理特征。
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Gastroenterology and Hepatology From Bed to Bench
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