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Neu5Gc regulates decidual macrophages leading to abnormal embryo implantation Neu5Gc 可调节蜕膜巨噬细胞,导致胚胎异常着床。
IF 5 3区 医学 Q1 Medicine Pub Date : 2024-03-18 DOI: 10.1038/s41435-024-00268-5
Wu Yue, Zhou Huiling, Liu Yuxin, Wang Ling, Gao Feng, Liu Qicai
Repeated implantation failure (RIF) is one of the most prominent problems in the field of assisted reproduction. Neu5Gc on the surface of decidual macrophages (dMΦ) leads to different activation patterns of dMΦ, which affects embryo implantation and development. Cmah−/− (Neu5Gc-deficient) mice induced to produce anti-Neu5Gc antibodies in vivo were given a special diet rich in Neu5Gc and their fertility was monitored. The long-term diet rich in Neu5Gc induced the decrease of endometrial receptivity of female mice. The pregnancy rate of female mice fed the normal diet was 63.6% (n = 11) and the average number of embryos was 9.571 ± 1.272, while the pregnancy rate of female mice fed the diet rich in Neu5Gc was 36.4% (n = 11) and the average number of embryos in pregnant mice was 5.750 ± 3.304. The intake of Neu5Gc and the production of anti-Neu5Gc antibody led to M1 polarization of endometrial dMΦ and abnormal embryo implantation.
反复植入失败(RIF)是辅助生殖领域最突出的问题之一。蜕膜巨噬细胞(dMΦ)表面的Neu5Gc会导致dMΦ的不同活化模式,从而影响胚胎的着床和发育。给体内诱导产生抗Neu5Gc抗体的Cmah-/-(Neu5Gc缺陷)小鼠喂食富含Neu5Gc的特殊食物,并监测其生育能力。长期食用富含 Neu5Gc 的食物会导致雌性小鼠子宫内膜接受能力下降。喂食正常饮食的雌性小鼠的妊娠率为 63.6%(n = 11),平均胚胎数为 9.571 ± 1.272;而喂食富含 Neu5Gc 的饮食的雌性小鼠的妊娠率为 36.4%(n = 11),平均胚胎数为 5.750 ± 3.304。摄入Neu5Gc和产生抗Neu5Gc抗体导致子宫内膜dMΦ极化为M1,胚胎着床异常。
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引用次数: 0
Chemoimmunotherapy combinations: translating basic knowledge into clinical successes 化学免疫疗法组合:将基础知识转化为临床成功。
IF 5 3区 医学 Q1 Medicine Pub Date : 2024-03-13 DOI: 10.1038/s41435-024-00264-9
Lionel Apetoh
While chemotherapeutic agents were long solely associated with immunosuppression, clinical data demonstrate that the combination of some chemotherapies with immunomodulators can be beneficial against cancer. Defining combinations featuring optimal anticancer activity along with minimal toxicity remains however a major challenge. Clinical evidence suggests that immune responses in patients treated with combination therapies are associated with progression-free survival. Progress in understanding the mechanisms responsible for anticancer immune responses following chemotherapy administration facilitated the translation of relevant chemoimmunotherapy combinations in the clinic.
尽管化疗药物长期以来只与免疫抑制有关,但临床数据表明,某些化疗药物与免疫调节剂的联合使用可对癌症产生益处。然而,如何确定具有最佳抗癌活性和最小毒性的组合仍然是一项重大挑战。临床证据表明,接受联合疗法治疗的患者的免疫反应与无进展生存期有关。对化疗后抗癌免疫反应机制的认识取得了进展,这有助于将相关的化疗免疫疗法组合应用于临床。
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引用次数: 0
RNA processing modification mediated subtypes illustrate the distinctive features of tumor microenvironment in hepatocellular carcinoma RNA 加工修饰介导的亚型说明了肝细胞癌肿瘤微环境的独特特征。
IF 5 3区 医学 Q1 Medicine Pub Date : 2024-03-12 DOI: 10.1038/s41435-024-00265-8
Xinhui Li, Shan Liu, Laibin Zou, Min Dai, Chaobei Zhu
Multiple transcript isoforms of genes can be formed by processing and modifying the 5′ and 3′ ends of RNA. Herein, the aim of this study is to uncover the characteristics of RNA processing modification (RPM) in hepatocellular carcinoma (HCC), and to identify novel biomarkers and potential targets for treatment. Firstly, integrated bioinformatics analysis was carried out to identify risk prognostic RPM regulators (RPMRs). Then, we used these RPMRs to identify subtypes of HCC and explore differences in immune microenvironment and cellular function improvement pathways between the sub-types. Finally, we used the principal component analysis algorithms to estimate RPMscore, which were applied to 5 cohorts. Lower RPMscore among patients correlated with a declined survival rate, increased immune infiltration, and raised expression of immune checkpoints, aligning with the “immunity tidal model theory”. The RPMscore exhibited robust, which was validated in multiple datasets. Mechanistically, low RPMscore can create an immunosuppressive microenvironment in HCC by manipulating tumor-associated macrophages. Preclinically, patients with high RPMscore might benefit from immunotherapy. The RPMscore is helpful in clustering HCC patients with distinct prognosis and immunotherapy. Our RPMscore model can help clinicians to select personalized therapy for HCC patients, and RPMscore may act a part in the development of HCC.
通过对 RNA 的 5' 端和 3' 端进行加工和修饰,可以形成基因的多种转录本异构体。本研究旨在揭示肝细胞癌(HCC)中 RNA 加工修饰(RPM)的特征,并确定新的生物标志物和潜在的治疗靶点。首先,我们进行了综合生物信息学分析,以确定风险预后RPM调节因子(RPMRs)。然后,我们利用这些RPMRs确定了HCC的亚型,并探索了亚型之间免疫微环境和细胞功能改善途径的差异。最后,我们使用主成分分析算法估算了RPM评分,并将其应用于5个队列。患者的RPM评分越低,生存率越低,免疫浸润越强,免疫检查点的表达越高,这与 "免疫潮汐模型理论 "相一致。RPM评分表现出稳健性,这在多个数据集中得到了验证。从机制上讲,低RPMscore可通过操纵肿瘤相关巨噬细胞在HCC中创造免疫抑制微环境。在临床前,高RPM评分的患者可能会从免疫疗法中获益。RPM评分有助于对预后不同的HCC患者进行分组和免疫治疗。我们的RPM评分模型可以帮助临床医生为HCC患者选择个性化疗法,RPM评分可能在HCC的发展过程中起到一定的作用。
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引用次数: 0
Pivotal role of BCL11B in the immune, hematopoietic and nervous systems: a review of the BCL11B-associated phenotypes from the genetic perspective BCL11B 在免疫、造血和神经系统中的关键作用:从遗传角度回顾 BCL11B 相关表型。
IF 5 3区 医学 Q1 Medicine Pub Date : 2024-03-12 DOI: 10.1038/s41435-024-00263-w
José María García-Aznar, Sara Alonso Alvarez, Teresa Bernal del Castillo
The transcription factor BCL11B plays an essential role in the development of central nervous system and T cell differentiation by regulating the expression of numerous genes involved in several pathways. Monoallelic defects in the BCL11B gene leading to loss-of-function are associated with a wide spectrum of phenotypes, including neurological disorders with or without immunological features and susceptibility to hematological malignancies. From the genetic point of view, the landscape of BCL11B mutations reported so far does not fully explain the genotype-phenotype correlation. In this review, we sought to compile the phenotypic and genotypic variables associated with previously reported mutations in this gene in order to provide a better understanding of the consequences of deleterious variants. We also highlight the importance of a careful evaluation of the mutation type, its location and the pattern of inheritance of the variants in order to assign the most accurate pathogenicity and actionability of the genetic findings.
转录因子 BCL11B 在中枢神经系统发育和 T 细胞分化过程中起着至关重要的作用,它调控着参与多种途径的众多基因的表达。BCL11B 基因的单倍性缺陷导致的功能缺失与多种表型有关,包括伴有或不伴有免疫学特征的神经系统疾病以及对血液恶性肿瘤的易感性。从遗传学的角度来看,迄今所报道的 BCL11B 基因突变情况并不能完全解释基因型与表型之间的相关性。在这篇综述中,我们试图梳理与之前报道的该基因突变相关的表型和基因型变量,以便更好地了解有害变异的后果。我们还强调了仔细评估变异类型、变异位置和变异遗传模式的重要性,以便最准确地确定遗传结果的致病性和可操作性。
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引用次数: 0
Intratumoral NK cell delivery combined with neutralization of the NKG2A pathway as treatment for solid cancer. 瘤内 NK 细胞递送结合中和 NKG2A 途径治疗实体瘤。
IF 5 3区 医学 Q1 Medicine Pub Date : 2024-03-09 DOI: 10.1038/s41435-024-00267-6
Ignacio Melero, Carmen Molina, Cristina Eguizabal, Maite Alvarez
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引用次数: 0
Getting under the skin: resident memory CD8+ T cells have a second residence in the draining lymph node 进入皮下:常住记忆 CD8+ T 细胞在引流淋巴结有第二居所。
IF 5 3区 医学 Q1 Medicine Pub Date : 2024-03-08 DOI: 10.1038/s41435-024-00266-7
Teresa Neuwirth, Azuah L. Gonzalez, Emilie Fisher-Gupta, Georg Stary
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引用次数: 0
Cytokine profiling and transcriptomics in mononuclear cells define immune variants in Meniere Disease 单核细胞中的细胞因子分析和转录组学确定了梅尼埃病的免疫变异。
IF 5 3区 医学 Q1 Medicine Pub Date : 2024-02-23 DOI: 10.1038/s41435-024-00260-z
Marisa Flook, Elena Rojano, Alvaro Gallego-Martinez, Alba Escalera-Balsera, Patricia Perez-Carpena, M. del Carmen Moleon, Rocio Gonzalez-Aguado, Victoria Rivero de Jesus, Emilio Domínguez-Durán, Lidia Frejo, Juan A. G. Ranea, Jose Antonio Lopez-Escamez
Meniere Disease (MD) is a chronic inner ear disorder characterized by vertigo attacks, sensorineural hearing loss, tinnitus, and aural fullness. Extensive evidence supporting the inflammatory etiology of MD has been found, therefore, by using transcriptome analysis, we aim to describe the inflammatory variants of MD. We performed Bulk RNAseq on 45 patients with definite MD and 15 healthy controls. MD patients were classified according to their basal levels of IL-1β into 2 groups: high and low. Differentially expression analysis was performed using the ExpHunter Suite, and cell type proportion was evaluated using the estimation algorithms xCell, ABIS, and CIBERSORTx. MD patients showed 15 differentially expressed genes (DEG) compared to controls. The top DEGs include IGHG1 (p = 1.64  $$times$$  10−6) and IGLV3-21 (p = 6.28  $$times$$  10−3), supporting a role in the adaptative immune response. Cytokine profiling defines a subgroup of patients with high levels of IL-1β with up-regulation of IL6 (p = 7.65  $$times$$  10−8) and INHBA (p = 3.39  $$times$$  10−7) genes. Transcriptomic data from peripheral blood mononuclear cells support a proinflammatory subgroup of MD patients with high levels of IL6 and an increase in naïve B-cells, and memory CD8+ T cells.
梅尼埃病(MD)是一种慢性内耳疾病,以眩晕发作、感音神经性听力损失、耳鸣和耳部饱胀为特征。已有大量证据支持梅尼埃病的炎症病因,因此,我们希望通过转录组分析来描述梅尼埃病的炎症变异。我们对 45 名明确的 MD 患者和 15 名健康对照者进行了大容量 RNAseq 分析。根据 IL-1β 的基础水平将 MD 患者分为两组:高组和低组。使用 ExpHunter 套件进行了差异表达分析,并使用 xCell、ABIS 和 CIBERSORTx 估算算法评估了细胞类型比例。与对照组相比,MD 患者有 15 个差异表达基因(DEG)。最主要的差异表达基因包括 IGHG1(p = 1.64 [公式:见正文] 10-6)和 IGLV3-21(p = 6.28 [公式:见正文] 10-3),支持在适应性免疫反应中发挥作用。细胞因子图谱确定了一个高水平 IL-1β 的患者亚群,其中 IL6(p = 7.65 [公式:见正文] 10-8)和 INHBA(p = 3.39 [公式:见正文] 10-7)基因上调。来自外周血单核细胞的转录组数据证实,MD 患者中存在一个促炎症亚组,其 IL6 水平较高,幼稚 B 细胞和记忆 CD8+ T 细胞增多。
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引用次数: 0
Epigenetic reprogramming of CAR T cells for in vivo functional persistence against solid tumors. 对 CAR T 细胞进行表观遗传学重编程,使其在体内持续发挥抗实体瘤的功能。
IF 5 3区 医学 Q1 Medicine Pub Date : 2024-02-22 DOI: 10.1038/s41435-024-00262-x
Michael Saitakis

Limited CAR T-cell expansion and persistence hinder therapeutic responses in solid cancer patients. To enhance the functional persistence of engineered T-cell therapies, we performed genetic disruption in human CAR T cells of SUV39H1, a histone 3 lysine 9 methyltransferase that promotes heterochromatin formation. This resulted in phenotypic CAR-T reprogramming that elicited optimal and sustained antitumor functionality. Single-cell transcriptomic (scRNA-seq) and chromatin accessibility (scATAC-seq) analyses of tumor-infiltrating CAR T cells showed early reprogramming into self-renewing, stem-like populations with decreased expression of dysfunction genes in all subpopulations. Moreover, we provided evidence that SUV39H1 inactivation elicits potent and durable functional persistence upon multiple tumor rechallenges. This opens a safe path to enhancing adoptive cell therapies for solid tumors.

有限的 CAR T 细胞扩增和持久性阻碍了实体瘤患者的治疗反应。为了提高工程 T 细胞疗法的功能持久性,我们在人类 CAR T 细胞中对 SUV39H1 进行了基因干扰,SUV39H1 是组蛋白 3 赖氨酸 9 甲基转移酶,能促进异染色质的形成。这导致了表型 CAR-T 重编程,从而激发了最佳和持续的抗肿瘤功能。对肿瘤浸润CAR-T细胞进行的单细胞转录组(scRNA-seq)和染色质可及性(scATAC-seq)分析表明,CAR-T细胞早期重编程为自我更新的干样细胞群,所有亚群中功能障碍基因的表达均有所下降。此外,我们还提供了证据表明,SUV39H1 失活可在多次肿瘤再挑战后产生强大而持久的功能持续性。这为加强实体瘤的采纳细胞疗法开辟了一条安全之路。
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引用次数: 0
Correction: Preclinical models of breast cancer: B6BC, a transplantable hormone receptor-positive C57BL/6 mouse cell line 更正:乳腺癌临床前模型:B6BC,一种可移植的激素受体阳性 C57BL/6 小鼠细胞系。
IF 5 3区 医学 Q1 Medicine Pub Date : 2024-02-20 DOI: 10.1038/s41435-024-00259-6
Maria Perez-Lanzon, Maria Chiara Maiuri, Carlos Lopez-Otin, Guido Kroemer
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引用次数: 0
CXCR4 overexpression in chronic lymphocytic leukemia associates with poorer prognosis: A prospective, single-center, observational study 慢性淋巴细胞白血病中的 CXCR4 过度表达与较差的预后有关:一项前瞻性单中心观察研究。
IF 5 3区 医学 Q1 Medicine Pub Date : 2024-02-17 DOI: 10.1038/s41435-024-00258-7
Xinran Xue, Zhihao Wen, Xin Zhang, Ying Yang, Yifei Li, Ruoxi Liao, Qin Zheng, Yang Fu, Yu Liu, Hongyan Liao
Controversial data have been reported on the prognostic value of C-X-C motif chemokine receptor 4 (CXCR4) in chronic lymphocytic leukemia (CLL). This prospective, single-center, observational study aimed to evaluate the role of CXCR4 in the pathophysiology of CLL and its prognostic role. A total of 158 patients of CLL were enrolled, and CXCR4 expression on CLL cells was detected by flow cytometry (FCM) at initial diagnosis. The patients were divided into 2 groups according to the CXCR4 mean fluorescence intensity (MFI) median. Also, four patient specimens from the CXCR4low and CXCR4high groups were selected for RNASeq analysis. The progression-free survival (PFS) of CLL patients in the CXCR4high group was significantly shorter than the CXCR4low group, with a median follow-up time of 27 months (log-rank P < 0.001). Moreover, CXCR4 overexpression (MFI > 3376) was an independent marker of poor PFS in CLL patients (P < 0.001). Analysis of RNASeq results revealed that CXCR4 plays an important role in the migration of CLL. Collectively, CXCR4 expression levels on leukemia cells can be detected rapidly by FCM. CXCR4 overexpression was significantly associated with poorer prognosis in CLL patients within a shorter follow-up time.
关于 C-X-C motif 趋化因子受体 4(CXCR4)在慢性淋巴细胞白血病(CLL)中的预后价值,有争议的数据报道。这项前瞻性单中心观察性研究旨在评估 CXCR4 在 CLL 病理生理学中的作用及其预后作用。研究共招募了 158 名 CLL 患者,在初诊时通过流式细胞术(FCM)检测 CLL 细胞上的 CXCR4 表达。根据CXCR4平均荧光强度(MFI)中位数将患者分为两组。同时,从CXCR4低组和CXCR4高组中选择4例患者标本进行RNASeq分析。CXCR4high组CLL患者的无进展生存期(PFS)明显短于CXCR4low组,中位随访时间为27个月(对数秩P 3376),是CLL患者PFS差的独立标志(P
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引用次数: 0
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Genes and immunity
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