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Lys-413 of S-phase mRNA cycling sequence binding protein from Leishmania donovani (LdCSBP) is modified through monoubiquitination that is responsible for inhibition of its riboendonuclease activity. 多诺瓦利什曼原虫(Leishmania donovani, LdCSBP) s期mRNA循环序列结合蛋白Lys-413通过单泛素化修饰,负责抑制其核糖核酸酶活性。
IF 1.4 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2014-12-01
Kasturi Guha, Sneha Das, Partha Saha

In addition to well-known process of proteasome-mediated degradation of polyubiquitinated proteins, monoubiquitination of proteins is also an important post-translational modification that regulates various non-degradative cellular processes like protein trafficking, cellular signalling, DNA replication and DNA repair. We have previously characterized a multi-domain cycling sequence binding protein LdCSBP from Leishmania donovani, which binds specifically to a conserved CAUAGAAG octamer containing RNAs via its uniquely arranged CCCH type Zn-fingers and degrades them using its Smr endonuclease domain, indicative of its potential role in the turnover of the S-phase mRNAs. Remarkably, its riboendonuclease activity is inhibited due to the incorporation of a monoubiquitin residue in the ZnF domain, though the target Lys residue remains unknown. Here, we report through systematic mutation of Lys residue to Ala that Lys-413 in LdCSBP is the site of monoubiquitination. However, the amino acid motif around the target Lys in LdCSBP is not consensus with any previously known monoubiquitination site, though partial homology is observed with a subset of recently identified mammalian ubiquitination target sites. Interestingly, Lys-413 of LdCSBP is conserved in the homologous annotated proteins from the related kinetoplastida parasites, suggesting similar monoubiquitination-mediated regulation of RNA endonuclease activity in the organisms.

除了众所周知的蛋白酶体介导的多泛素化蛋白降解过程外,蛋白质的单泛素化也是一种重要的翻译后修饰,可调节多种非降解细胞过程,如蛋白质运输、细胞信号传导、DNA复制和DNA修复。我们之前已经鉴定了来自多诺氏利什曼原虫的多结构域循环序列结合蛋白LdCSBP,它通过其独特排列的CCCH型锌指特异性地结合到含有rna的保守的CAUAGAAG八聚体上,并使用其Smr内切酶结构域降解它们,这表明它在s期mrna的转换中具有潜在的作用。值得注意的是,它的核糖核酸酶活性由于在ZnF结构域中加入了一个单泛素残基而受到抑制,尽管目标赖氨酸残基仍然未知。本研究通过Lys残基对Ala的系统突变,发现Lys-413是lcsbp的单泛素化位点。然而,LdCSBP中目标赖氨酸周围的氨基酸基序与任何先前已知的单泛素化位点并不一致,尽管与最近发现的哺乳动物泛素化靶点子集存在部分同源性。有趣的是,LdCSBP的Lys-413在相关的动胞体寄生虫的同源注释蛋白中是保守的,这表明在生物体中类似的单泛素化介导的RNA内切酶活性调节。
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引用次数: 0
Insulin signaling network in cancer. 癌症中的胰岛素信号网络。
IF 1.4 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2014-12-01
Alpana Ray, Mohamed Alalem, Bimal K Ray

The primary function of insulin is viewed as a hormone that controls blood glucose level. However, there is growing evidence that aberrant insulin level and insulin-mediated signaling can lead to cancer development and progression. The insulin-cancer relationship has stemmed from various observational and epidemiological studies, which linked higher incidence of cancer with central obesity, type II diabetes and other conditions associated with increased levels of circulating insulin, insulin resistance and hyperinsulinemic states. Increased risk of developing a range of cancers is also seen with a certain treatment options used to lower blood glucose level in diabetic patients. While metformin monotherapy has the lowest risk of developing cancer, in comparison, treatment with insulin or insulin secretagogues shows more likelihood to develop solid cancers. Cellular signaling initiated by insulin provides a clue regarding these diverse cellular outcomes. This review discusses how the insulin enacts such diverse physiological effects and the insulin-cancer relationship, with focus on the role of insulin signaling in cancer.

胰岛素的主要功能被认为是控制血糖水平的激素。然而,越来越多的证据表明,异常的胰岛素水平和胰岛素介导的信号传导可导致癌症的发生和进展。胰岛素与癌症的关系源于各种观察和流行病学研究,这些研究将癌症的高发病率与中枢性肥胖、II型糖尿病和其他与循环胰岛素水平升高、胰岛素抵抗和高胰岛素状态相关的疾病联系起来。糖尿病患者降低血糖水平的特定治疗方案也会增加患一系列癌症的风险。虽然二甲双胍单药治疗患癌症的风险最低,但相比之下,用胰岛素或胰岛素分泌剂治疗更有可能患实体癌。胰岛素启动的细胞信号为这些不同的细胞结果提供了线索。本文就胰岛素如何发挥多种生理作用以及胰岛素与癌症的关系进行综述,重点讨论胰岛素信号在癌症中的作用。
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引用次数: 0
Involvement of the early growth response protein 1 in vascular pathophysiology: an overview. 早期生长反应蛋白1在血管病理生理中的参与:综述。
IF 1.4 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2014-12-01
Estelle R Simo Cheyou, Viktoria Youreva, Ashok K Srivastava

Hyperactivation of proliferative and growth promoting pathways underlies the progression of vessel remodeling, leading to vascular dysfunction. An upregulation of early growth response protein 1 (Egr-1), a zinc finger transcription factor has been observed in several models of vascular diseases. In the vasculature, Egr-1 expression can be induced by multiple hormonal, metabolic and external stimuli, such as growth factors, cytokines, reactive oxygen species, hyperglycaemia and stretch-induced stress. The structure of the Egr-1 promoter allows both its auto-regulation and its binding with several regulatory transcription cofactors like the serum response factor and the cAMP response element binding protein. Pharmacological and genetic studies have revealed the involvement of several signaling pathways that contribute to the expression of Egr-1. Among them, the mitogen-activated protein kinase pathway has emerged as a predominant signaling cascade that regulates Egr-1 transcription in response to various stimuli. Moreover, targeted deletion of Egr-1 by DNAzymes, antisense oligonucleotides or RNA interference has also helped in defining the importance of Egr-1 in the pathophysiology of vascular diseases. Neointimal formation and expression of genes directly linked with proinflammatory processes have been demonstrated to be enhanced by Egr-1 expression and activity. This review provides an overview on the signaling components implicated in Egr-1 expression and discusses its potential involvement in vascular pathophysiology.

增殖和生长促进途径的过度激活是血管重塑进程的基础,导致血管功能障碍。早期生长反应蛋白1 (Egr-1)的上调,锌指转录因子已在几种血管疾病模型中观察到。在血管系统中,Egr-1的表达可被多种激素、代谢和外部刺激诱导,如生长因子、细胞因子、活性氧、高血糖和拉伸诱导的应激。Egr-1启动子的结构允许其自动调节并与几种调节转录辅助因子结合,如血清反应因子和cAMP反应元件结合蛋白。药理学和遗传学研究已经揭示了参与Egr-1表达的几种信号通路。其中,丝裂原激活的蛋白激酶途径已成为一个主要的信号级联,在各种刺激下调节Egr-1的转录。此外,通过DNAzymes、反义寡核苷酸或RNA干扰靶向删除Egr-1也有助于确定Egr-1在血管疾病病理生理中的重要性。新内膜的形成和与促炎过程直接相关的基因的表达已被证明可以通过Egr-1的表达和活性得到增强。本文综述了与Egr-1表达相关的信号成分,并讨论了其在血管病理生理中的潜在作用。
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引用次数: 0
Phospholipid remodeling and eicosanoid signaling in colon cancer cells. 结肠癌细胞中的磷脂重塑和类二十烷信号传导。
IF 1.4 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2014-12-01
Siddhartha Das, Leobarda Robles Martinez, Suparna Ray

Phospholipid remodeling and eicosanoid synthesis are central to lipid-based inflammatory reactions. Studies have revealed that membrane phospholipid remodeling by fatty acids through deacylation/reacylation reactions increases the risk of colorectal cancers (CRC) by allowing the cells to produce excess inflammatory eicosanoids, such as prostaglandins, thromboxanes and leukotrienes. Over the years, efforts have been made to understand the lipid remodeling pathways and to design anti-cancer drugs targeting the enzymes of eicosanoid biosynthesis. Here, we discuss the recent progress in phospholipid remodeling and eicosanoid biosynthesis in CRC.

磷脂重塑和类二十烷合成是脂基炎症反应的核心。研究表明,脂肪酸通过去酰化/再酰化反应对膜磷脂进行重塑,使细胞产生过多的炎性类二十烷,如前列腺素、血栓烷和白三烯,从而增加结直肠癌(CRC)的风险。多年来,人们一直在努力了解脂质重塑途径,并设计针对类二十烷类生物合成酶的抗癌药物。本文就结直肠癌中磷脂重塑和类二十烷酸生物合成的研究进展进行综述。
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引用次数: 0
Challenges of ionizing radiation in tumor treatment and role of angiogenesis. 电离辐射在肿瘤治疗中的挑战和血管生成的作用。
IF 1.4 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2014-12-01
Subir Kumar Das

Ionizing radiation is a non-specific, but most widely used therapeutic method for cancer treatment. However, a minor fraction of tumor cell population manages to survive after radiation. Radiation efficacy depends on adequate oxygen supply. Rapid growing tumors cause hypoxia that upregulates many pro-survival pathways. At clinical doses, radiation activates inflammatory pathways and causes oxidative stress that plays a positive role during angiogenesis. Selective targeting of signaling mechanisms may radiosensitize tumors.

电离辐射是一种非特异性的,但最广泛应用于癌症治疗的治疗方法。然而,一小部分肿瘤细胞在放疗后能够存活。辐射效能取决于充足的氧气供应。快速生长的肿瘤导致缺氧,从而上调许多促生存途径。在临床剂量下,辐射激活炎症途径并引起氧化应激,在血管生成中起积极作用。选择性靶向信号机制可能使肿瘤放射增敏。
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引用次数: 0
Herbicide paraquat induces sex-specific variation of neuroinflammation and neurodegeneration in Drosophila melanogaster. 除草剂百草枯诱导黑腹果蝇神经炎症和神经变性的性别特异性变异。
IF 1.4 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2014-12-01
Shauryabrota Dalui, Arindam Bhattacharyya

There are several reports on herbicide paraquat (PQ)-induced Parkinsonian-like pathology in different animal models, including Drosophila melanogaster. Also, the role of some inflammatory factors, such as nitric oxide is reported in PQ-induced neuroinflammation of Drosophila. Although invertebrate model is valuable to study the conserved inflammatory pathway at the time of neurodegeneration, but neuroinflammation during PQ-mediated neurodegeneration has not been studied explicitly in Drosophila. In this study, the inflammatory response was examined in Drosophila model during PQ-induced neurodegeneration. We found that after exposure to PQ, survivability and locomotion ability were affected in both sexes of Drosophila. Behavioural symptoms indicated similar physiological features of Parkinson's disease (PD) in different animal models, as well as in humans. Our study revealed alteration in proinflamatory factor, TNF-α and Eiger (the Drosophila homologue in TNF superfamily) was changed in PQ-treated Drosophila both at protein and mRNA level during neurodegeneration. To ensure the occurrence of neurodegeneration, tyrosine hydroxylase (TH) positive neuronal cell loss was considered as a hallmark of PD in the fly brain. Thus, our result revealed the conserved inflammatory events in terms of expression of TNF-α and Eiger present during a sublethal dose of PQ-administered neurodegeneration in male and female Drosophila with significant variation in proinflammatory factor level among both the sexes.

除草剂百草枯(PQ)在不同动物模型中引起帕金森样病理,包括果蝇。此外,一些炎症因子,如一氧化氮,在pq诱导的果蝇神经炎症中的作用也有报道。尽管无脊椎动物模型对研究神经退行性变时的保守炎症通路有价值,但pq介导的神经退行性变过程中的神经炎症尚未在果蝇中得到明确的研究。在本研究中,我们在果蝇模型中检测了pq诱导的神经变性的炎症反应。我们发现,暴露于PQ后,果蝇的生存能力和运动能力都受到影响。行为症状在不同动物模型和人类中显示出相似的帕金森病(PD)生理特征。我们的研究发现,pq处理的果蝇在神经退行性变过程中,促炎因子、TNF-α和Eiger (TNF超家族中的果蝇同系物)在蛋白质和mRNA水平上发生了变化。为了确保神经退行性变的发生,酪氨酸羟化酶(TH)阳性的神经元细胞损失被认为是苍蝇大脑PD的标志。因此,我们的研究结果揭示了在pq给药的亚致死剂量下,雄性和雌性果蝇的神经退行性变中TNF-α和Eiger表达方面的保守炎症事件,两性之间的促炎因子水平存在显著差异。
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引用次数: 0
Mechanisms for the defects in phospholipid signal transduction in diabetic cardiomyopathy. 糖尿病性心肌病中磷脂信号转导缺陷的机制。
IF 1.4 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2014-12-01
Paramjit S Tappia, Naranjan S Dhalla

Although diabetic cardiomyopathy is associated with heart dysfunction and disturbance in cardiac sarcolemmal membrane phospholipid composition, the role of the different phospholipases and their related signaling mechanisms to altered function of the heart in diabetes is not completely understood. Thus, understanding the pathophysiology of cardiovascular abnormalities in diabetes, as well as identifying defects in various components of the phospholipid signaling pathways, that could serve as therapeutic targets, is warranted. Accordingly, this review provides an outline of the role of and the mechanisms for the defects in phospholipase A2, C and D-mediated signal transduction in the diabetic heart. In addition, the potential of different phospholipases as targets for drug development for the prevention/treatment of heart disease in diabetes is discussed.

虽然糖尿病性心肌病与心功能障碍和心脏肌膜磷脂组成紊乱有关,但不同磷脂酶及其相关信号机制在糖尿病患者心脏功能改变中的作用尚不完全清楚。因此,了解糖尿病心血管异常的病理生理学,以及识别磷脂信号通路中各种成分的缺陷,可以作为治疗靶点,是有必要的。因此,本文综述了磷脂酶A2、C和d介导的信号转导缺陷在糖尿病心脏中的作用和机制。此外,本文还讨论了不同磷脂酶作为预防/治疗糖尿病心脏病的药物开发靶点的潜力。
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引用次数: 0
Implications of fundamental signalling alterations in diabetes mellitus-associated cardiovascular disease . 糖尿病相关心血管疾病基本信号改变的意义
IF 1.4 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2014-12-01
Pitchai Balakumar

The chronic diabetes mellitus (DM) is a major risk factor for cardiovascular disease. The incidence of cardiovascular disease might be a foremost cause of morbidity and mortality in patients afflicted with DM. In fact, DM is associated with multi-factorial cardiovascular signalling alterations via significant modulation of expression pattern, activation or release of PI3K, PKB, eNOS, EDRF, NADPH oxidase, EDHF, CGRP, adenosine, iNOS, ROCK, PKC-β2, CaMKII, microRNA (miR)-126 and miR-130a, which could result in inadequate maintenance of cardiovascular physiology and subsequent development of cardiovascular pathology. This review highlights the possible adverse implications of fundamental cardiovascular signalling alteration in DM-associated cardiovascular disease pathology.

慢性糖尿病(DM)是心血管疾病的主要危险因素。心血管疾病的发病率可能是糖尿病患者发病率和死亡率的首要原因。事实上,糖尿病与多因素心血管信号改变有关,通过显著调节表达模式,激活或释放PI3K、PKB、eNOS、EDRF、NADPH氧化酶、EDHF、CGRP、腺苷、iNOS、ROCK、PKC-β2、CaMKII、microRNA (miR)-126和miR-130a。这可能导致心血管生理维持不足和随后的心血管病理发展。这篇综述强调了dm相关心血管疾病病理中基础心血管信号改变可能产生的不良影响。
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引用次数: 0
TLR4-mediated activation of MyD88 signaling induces protective immune response and IL-10 down-regulation in Leishmania donovani infection. tlr4介导的MyD88信号激活诱导多诺瓦利什曼原虫感染的保护性免疫反应和IL-10下调
IF 1.4 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2014-12-01
Joydeep Paul, Kshudiram Naskar, Sayan Chowdhury, Md Nur Alam, Tapati Chakraborti, Tripti De

In visceral leishmaniasis, a fragmentary IL-12 driven type 1 immune response along with the expansion of IL-10 producing T-cells correlates with parasite burden and pathogenesis. Successful immunotherapy involves both suppression of IL-10 production and enhancement of IL-12 and nitric oxide (NO) production. As custodians of the innate immunity, the toll-like receptors (TLRs) constitute the first line of defense against invading pathogens. The TLR-signaling cascade initiated following innate recognition of microbes shapes the adaptive immune response. Whereas numerous studies have correlated parasite control to the adaptive response in Leishmania infection, growing body of evidence suggests that the activation of the innate immune response also plays a pivotal role in disease pathogenicity. In this study, using a TLR4 agonist, a Leishmania donovani (LD) derived 29 kDa β 1,4 galactose terminal glycoprotein (GP29), we demonstrated that the TLR adaptor myeloid differentiation primary response protein-88 (MyD88) was essential for optimal immunity following LD infection. Treatment of LD-infected cells with GP29 stimulated the production of IL-12 and NO while suppressing IL-10 production. Treatment of LD-infected cells with GP29 also induced the degradation of IKB and the nuclear translocation of NF-κB, as well as rapid phosphorylation of p38 MAPK and p54/56 JNK. Knockdown of TLR4 or MYD88 using siRNA showed reduced inflammatory response to GP29 in LD-infected cells. Biochemical inhibition of p38 MAPK, JNK or NF-κB, but not p42/44 ERK, reduced GP29-induced IL-12 and NO production in LD-infected cells. These results suggested a potential role for the TLR4-MyD88-IL-12 pathway to induce adaptive immune responses to LD infection that culminated in an effective control of intracellular parasite replication.

在内脏利什曼病中,零碎的IL-12驱动的1型免疫反应以及产生IL-10的t细胞的扩增与寄生虫负担和发病机制相关。成功的免疫治疗包括抑制IL-10的产生和增强IL-12和一氧化氮(NO)的产生。toll样受体(TLRs)作为先天免疫的守护者,构成了抵御病原体入侵的第一道防线。在对微生物的先天识别后启动的tlr信号级联形成了适应性免疫反应。尽管许多研究已经将寄生虫控制与利什曼原虫感染的适应性反应联系起来,但越来越多的证据表明,先天免疫反应的激活在疾病致病性中也起着关键作用。在这项研究中,使用TLR4激动剂,利什曼原虫(LD)衍生的29 kDa β 1,4半乳糖末端糖蛋白(GP29),我们证明了TLR适配器髓样分化初级反应蛋白-88 (MyD88)对LD感染后的最佳免疫至关重要。用GP29处理ld感染细胞刺激IL-12和NO的产生,同时抑制IL-10的产生。用GP29处理ld感染的细胞也诱导了IKB的降解和NF-κB的核易位,以及p38 MAPK和p54/56 JNK的快速磷酸化。使用siRNA敲除TLR4或MYD88显示ld感染细胞中对GP29的炎症反应降低。生化抑制p38 MAPK、JNK或NF-κB,而不抑制p42/44 ERK,可降低gp29诱导的ld感染细胞中IL-12和NO的产生。这些结果表明,TLR4-MyD88-IL-12途径可能在诱导对LD感染的适应性免疫反应中发挥潜在作用,最终有效控制细胞内寄生虫的复制。
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引用次数: 0
Preface. London tap water experiment. 前言。伦敦自来水实验。
IF 1.4 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2014-12-01
Chakraborti Sajal
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引用次数: 0
期刊
Indian journal of biochemistry & biophysics
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