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Endemic avian influenza landscape in Asia: sustained zoonotic risks. 亚洲地方性禽流感形势:持续的人畜共患风险。
IF 3.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-11-11 DOI: 10.1007/s15010-025-02681-y
Nitin Gupta, Martin P Grobusch, Jan Felix Drexler, José Ramón Paño-Pardo, Galadriel Pellejero-Sagastizabal, Sotirios Tsiodras, Aleksandra Barac, F-Xavier Lescure, Pikka Jokelainen

Avian influenza remains a persistent global health threat, with Asia at its epicentre due to dense poultry production, live bird markets, and cross-species interfaces with ducks and swine. Several pathogenic subtypes continue to cause recurrent zoonotic spillovers with varying human case fatality, reinforcing the region's role as a pandemic hotspot. Surveillance highlights the main key ecological drivers: sustained viral circulation in live bird markets, subclinical infection in domestic ducks, wild birds serving as reservoirs, and multiple species with dual receptors that can act as mixing vessels enabling reassortment. Recent events in the United States, where H5N1 has emerged in dairy cattle with viral RNA detectable in retail milk and human cases arising from both poultry and dairy cattle exposures, further demonstrate the capacity of these viruses to invade new mammalian hosts and the food chain. Advances in poultry vaccination and next-generation antivirals show promise but are constrained by antigenic drift, incomplete protection, logistical barriers, and uneven uptake. Human preparedness remains weakened by diagnostic delays, limited access to therapeutics, and fragmented surveillance. Mitigation requires regionally tailored, One Health-driven strategies, market regulation, duck vaccination, swine surveillance, and rapid therapeutic deployment, together with equitable access to tools and transparent international collaboration to reduce zoonotic risk and strengthen global pandemic readiness. This review synthesizes recent evidence on avian influenza virus infections in Asia, outlining zoonotic risks, key drivers, and mitigation strategies, and concludes that the sustained circulation of these viruses in poultry and wild birds continues to present significant challenges for animal health, public health, and pandemic preparedness, highlighting the importance of strengthened One Health surveillance and control measures.

禽流感仍然是一个持续存在的全球健康威胁,由于密集的家禽生产、活禽市场以及鸭和猪的跨物种接触,亚洲是其震中。几种致病亚型继续引起反复出现的人畜共患病外溢,造成不同的人间病死率,加强了该区域作为大流行热点的作用。监测突出了主要的生态驱动因素:活禽市场中持续的病毒循环,家鸭的亚临床感染,作为宿主的野鸟,以及具有双重受体的多种物种可以作为混合容器,从而实现重新组合。最近在美国发生的事件进一步表明,这些病毒有能力侵入新的哺乳动物宿主和食物链。在美国,在零售牛奶中发现H5N1型病毒,并在家禽和奶牛中发现病毒RNA。家禽疫苗接种和下一代抗病毒药物的进展显示出希望,但受到抗原漂移、保护不完全、后勤障碍和吸收不均匀的限制。由于诊断延误、获得治疗的机会有限以及监测不完整,人类的防范能力仍然被削弱。缓解需要根据地区情况量身定制、以“一种健康”为导向的战略、市场监管、鸭疫苗接种、猪监测和快速治疗部署,以及公平获得工具和透明的国际合作,以减少人畜共患病风险并加强全球大流行防范。本综述综合了亚洲禽流感病毒感染的最新证据,概述了人畜共患风险、主要驱动因素和缓解战略,并得出结论认为,这些病毒在家禽和野生鸟类中的持续传播继续对动物卫生、公共卫生和大流行防范构成重大挑战,强调了加强“同一个卫生”监测和控制措施的重要性。
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引用次数: 0
NDM-5 and siderophore receptor mutations drive high-level cefiderocol resistance in Klebsiella pneumoniae: a case series. NDM-5和铁载体受体突变驱动肺炎克雷伯菌高水平头孢地罗耐药:一个病例系列。
IF 3.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-10-01 DOI: 10.1007/s15010-025-02647-0
Michelle H Potter, Wajih Askar, Gerardo F Gomez-Abundis, Kent Carpenter, Emir Kobic

Background: Infections with Carbapenem-resistant Enterobacterales (CREs) are a serious public health threat. The emergence of distinct New Delhi metallo-beta-lactamase (NDM)-producing K. pneumoniae strains resistant to cefiderocol is a significant concern given the limited armamentarium for these carbapenemases.

Methods: A case series of 12 patients was described from a single institution that had cefiderocol-resistant, NDM-producing K. pneumoniae infections between January 2023 and July 2024. Whole genome sequencing with core SNP analysis was performed to identify resistance mechanisms and clonal relatedness for 9 isolates.

Results: Patients presented with various infections, including skin and soft tissue infections, pneumonia, and bacteremia. Of concern, cefiderocol resistance was seen among patients with and without prior cefiderocol exposure. Genomic analysis for 9 patients revealed NDM-5 in every isolate, along with additional mutations associated with resistance. A cluster of ST147 identified multiple distinct CirA disruptions, suggestive of convergent evolution with or without cefiderocol exposure. Treatment with either ceftazidime-avibactam plus aztreonam or tigecycline was successful in most instances, although microbiologic recurrence occurred in certain cases.

Conclusion: High level cefiderocol resistance among NDM-5 producing K. pneumoniae with siderophore mutations add more challenges to treating CRE infections. Stricter infection control measures along with enhanced surveillance are needed, especially in regions where NDM is endemic to limit additional spread of these variants.

背景:碳青霉烯耐药肠杆菌(cre)感染是严重的公共卫生威胁。鉴于这些碳青霉烯酶的装备有限,出现了对头孢地罗具有耐药性的独特新德里金属- β -内酰胺酶(NDM)产生肺炎克雷伯菌菌株是一个重大问题。方法:在2023年1月至2024年7月期间,对来自一家机构的12例耐头孢地酚、产生ndm的肺炎克雷伯菌感染患者进行了病例系列分析。采用全基因组测序和核心SNP分析鉴定9株菌株的耐药机制和克隆亲缘性。结果:患者出现多种感染,包括皮肤和软组织感染、肺炎和菌血症。值得关注的是,在有或没有头孢地罗暴露的患者中发现了头孢地罗耐药性。对9名患者的基因组分析显示,每个分离株中都有NDM-5,以及与耐药性相关的其他突变。ST147集群鉴定出多种不同的CirA中断,提示有或没有头孢地罗暴露的趋同进化。头孢他啶-阿维巴坦加阿曲南或替加环素治疗在大多数情况下是成功的,尽管在某些情况下发生微生物复发。结论:产NDM-5的铁载体突变肺炎克雷伯菌对头孢地罗的高水平耐药给CRE感染的治疗增加了挑战。需要采取更严格的感染控制措施并加强监测,特别是在NDM流行的地区,以限制这些变体的进一步传播。
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引用次数: 0
Antibacterial therapy in central nervous system infections - breakpoints versus minimal inhibitory concentrations related to body fluid levels. 中枢神经系统感染的抗菌治疗-与体液水平相关的断点与最小抑制浓度
IF 3.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-11-07 DOI: 10.1007/s15010-025-02678-7
Roland Nau, Jana Seele, Utz Reichard, Fritz Sörgel

Breakpoints to define the susceptibility of pathogens to antibiotics are becoming increasingly popular as guidance for antimicrobial therapy. Some breakpoints consider divergent concentrations of antibiotics in different compartments, others list one breakpoint for infections at all sites. Compared to the determination of exact minimal inhibitory concentrations (MICs) and relation of these MICs to concentrations achievable in ventricular CSF, the exclusive use of breakpoints for central nervous system (CNS) infections is a setback. The lack of the determination of exact MICs may be a risk, particularly when no clinical breakpoints for CNS infections have been defined. Moreover, the current practice of MIC determination of β-lactam/β-lactamase inhibitor combinations with fixed β-lactamase inhibitor concentrations ignores that often these β-lactamase inhibitor concentrations are not attained in CSF with established antibiotic regimens. In CNS infections, we strongly recommend the exact determination of MICs and their interpretation in relation to the true antibiotic concentrations in the infected compartment.

定义病原体对抗生素敏感性的断点作为抗菌治疗的指导越来越受欢迎。一些断点考虑了不同隔间中抗生素浓度的差异,另一些则列出了所有部位感染的一个断点。与确定确切的最低抑制浓度(mic)以及这些mic与脑室CSF可达到的浓度的关系相比,中枢神经系统(CNS)感染的独家使用断点是一个挫折。缺乏精确mic的确定可能是一种风险,特别是当没有确定中枢神经系统感染的临床断点时。此外,目前采用MIC测定固定β-内酰胺酶抑制剂浓度的β-内酰胺酶抑制剂/β-内酰胺酶抑制剂联合用药的做法忽略了一个事实,即在已建立的抗生素方案下,这些β-内酰胺酶抑制剂的浓度通常无法在CSF中达到。在中枢神经系统感染中,我们强烈建议精确测定mic,并解释其与感染室中真实抗生素浓度的关系。
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引用次数: 0
Efficacy and safety of colistin-doxycycline combination therapy in multi-drug resistance Gram-negative infections: a double-blind randomized controlled trial. 多粘菌素-强力霉素联合治疗多重耐药革兰氏阴性感染的疗效和安全性:一项双盲随机对照试验。
IF 3.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-11-20 DOI: 10.1007/s15010-025-02698-3
Shaghayegh Abaft, Zeynab Yassin, Mahdi Ahmadinia, Azadeh Eshraghi, Behnaz Gholizadeh Niari, Sara Minaeian, Maryam Farasatinasab

Background & objectives: Multidrug-resistant (MDR) Klebsiella pneumoniae poses a critical treatment challenge. Colistin remains a last-resort antibiotic but is limited by nephrotoxicity and resistance. Though clinical data are limited, Doxycycline has demonstrated in vitro synergy with colistin. Colistin-meropenem is frequently used as a comparator regimen, despite mixed evidence on its synergistic activity. This study evaluates the efficacy, microbiological response, and safety of colistin-doxycycline versus colistin-meropenem in MDR Gram-negative infections.

Methods: A double-blind, randomized controlled trial was conducted at a teaching hospital. Adult patients with culture-confirmed MDR Klebsiella pneumoniae infections were randomized to receive colistin-doxycycline or colistin-meropenem. The primary outcome was clinical cure, defined as resolution of infection signs without therapy escalation and in-hospital mortality. Secondary outcomes included microbiological eradication, acute kidney injury (AKI), and treatment-related adverse events. Patients were followed throughout hospitalization and for 14 days post-treatment.

Results: A total of 46 patients were enrolled, with 23 patients in each group. Clinical cure rates were significantly higher in the colistin-doxycycline group (87.0% vs. 46.7%, p = 0.012), and mortality was lower (69.6% vs. 86.7%, p = 0.017). Microbiological eradication was also superior (p = 0.016), and nephrotoxicity incidence was numerically lower (19.1% vs. 33.3%, p = 0.092). Faster resolution of inflammation (p < 0.05) and reduced need for mechanical ventilation (60.9% vs. 33.3%, p = 0.028) were observed in the colistin-doxycycline group.

Conclusions: Colistin-doxycycline showed superior efficacy to colistin-meropenem in MDR Klebsiella pneumoniae infections, with higher cure rates, better bacterial eradication, and a favorable safety trend. These results support its potential as a possible alternative option in managing MDR Gram-negative infections, though confirmation in larger multicenter trials is needed.

背景与目的:耐多药肺炎克雷伯菌(MDR)是一项重大的治疗挑战。粘菌素仍然是最后的抗生素,但受到肾毒性和耐药性的限制。尽管临床数据有限,多西环素已经证明了与粘菌素的体外协同作用。粘菌素-美罗培南经常被用作比较方案,尽管关于其协同活性的证据不一。本研究评估多粘菌素-多西环素与多粘菌素-美罗培南在耐多药革兰氏阴性感染中的疗效、微生物反应和安全性。方法:在某教学医院进行双盲、随机对照试验。培养确诊的多药耐药肺炎克雷伯菌感染的成年患者随机接受粘菌素-强力霉素或粘菌素-美罗培南治疗。主要结局是临床治愈,定义为感染症状的缓解,没有治疗升级和住院死亡率。次要结局包括微生物根除、急性肾损伤(AKI)和治疗相关不良事件。在整个住院期间和治疗后14天对患者进行随访。结果:共纳入46例患者,每组23例。黏菌素-强力霉素组临床治愈率显著高于对照组(87.0%比46.7%,p = 0.012),死亡率显著低于对照组(69.6%比86.7%,p = 0.017)。微生物根除也更优越(p = 0.016),肾毒性发生率较低(19.1%比33.3%,p = 0.092)。结论:粘菌素-强力霉素治疗耐多药肺炎克雷伯菌感染的疗效优于粘菌素-美罗培南,治愈率更高,细菌根除效果更好,安全性趋势良好。这些结果支持其作为管理耐多药革兰氏阴性感染的可能替代方案的潜力,尽管需要在更大规模的多中心试验中得到证实。
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引用次数: 0
Reply to Yaginuma, Seki and Shiraishi. 回复谷沼、关和白石。
IF 3.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-10-31 DOI: 10.1007/s15010-025-02673-y
Thomas Sahlström Månsson, Alice Askemyr, Torgny Sunnerhagen, Johan Tham, Kristian Riesbeck, Lisa Mellhammar
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引用次数: 0
Candida auris candidemia, septic arthritis, and vertebral osteomyelitis requiring dual antifungal therapy: a case report. 耳念珠菌念珠菌血症,脓毒性关节炎和椎体骨髓炎需要双重抗真菌治疗:1例报告。
IF 3.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-09-25 DOI: 10.1007/s15010-025-02643-4
Lizis Rodriguez, Laura Brizuela Grabosky, Jeremy Cypen

Background: Candida auris is a significant cause of severe infections in immunocompromised patients, contributing to its frequent occurrence in healthcare settings. Although Candida species are typically linked to candidemia, deep-seated infections like osteomyelitis have also been observed, though they are rarely documented in literature. A 72-year-old man with Guillain-Barré syndrome (GBS) and quadriplegia, status-post tracheostomy and gastrostomy tube placement, presented with new right facial droop and aphasia. A brain CT was unremarkable. Labs were significant for leukocytosis, anemia, and elevated lactic acid consistent with septic shock. A CT scan of the abdomen and pelvis revealed fluid in both hip joints, concerning for source of infection. Fluid cultures from his left hip grew Candida auris. He was subsequently also diagnosed with Candida auris osteomyelitis and discitis of the thoracic spine, confirmed by PET scan and follow-up fine-needle aspiration. The patient had persistent infection despite treatment with Amphotericin B and micafungin for nine months but has shown clinical and radiographic signs of improvement. A full 12-month course of antifungal therapy is to be completed.

Conclusion: This case underscores the importance of thorough tissue, joint, and vertebral sampling for accurate diagnosis, and highlights the urgent need for standardized treatment protocols for Candida auris osteomyelitis to improve patient outcomes.

背景:耳念珠菌是免疫功能低下患者严重感染的重要原因,在医疗保健机构中经常发生。虽然念珠菌通常与念珠菌有关,但也观察到像骨髓炎这样的深层感染,尽管它们很少在文献中记录。一位72岁男性患者,患有吉兰-巴罗综合征(GBS)和四肢瘫痪,气管造口和胃造口置管后状态,出现新的右侧面部下垂和失语。脑部CT检查无明显异常。实验室有白细胞增多、贫血和乳酸升高,与感染性休克一致。腹部和骨盆CT扫描显示双髋关节积液,可能是感染源。左臀部的液体培养培养出了耳念珠菌。他随后也被诊断为耳念珠菌骨髓炎和胸椎椎间盘炎,经PET扫描和随访细针穿刺证实。尽管用两性霉素B和米卡芬宁治疗了9个月,但患者仍持续感染,但临床和影像学表现出改善迹象。完成12个月的抗真菌治疗。结论:该病例强调了彻底的组织、关节和椎体取样对准确诊断的重要性,并强调了耳念珠菌骨髓炎标准化治疗方案的迫切需要,以改善患者的预后。
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引用次数: 0
Post-tuberculosis lung disease: a guide for clinicians. 结核后肺病:临床医生指南。
IF 3.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-09-25 DOI: 10.1007/s15010-025-02645-2
Giovanni Fumagalli, Jessica Mencarini, Irene Sini, Lucia Allavena, Marina Tadolini, Marco Mantero, Francesco Blasi, Niccolò Riccardi, Agostina Pontarelli, Pavilio Piccioni, Andrea Calcagno, Giovanni Sotgiu, Divya Shah, Luigi Ruffo Codecasa, Roberto Parrella

Post-tuberculosis lung disease (PTLD) is an increasingly recognized condition that significantly affects survivors' quality of life, creating disability and incrementing the risk of mortality. PTLD includes a spectrum of structural and functional lung impairments such as obstructive, restrictive, and mixed patterns, bronchiectasis, and pulmonary fibrosis that persist beyond microbiological cure. Global prevalence data highlight a heavy burden of PTLD, especially in high-incidence regions, driven by late diagnosis and suboptimal treatment. Functional and radiological evaluation remains critical for timely diagnosis, with spirometry and imaging revealing lasting abnormalities in a large proportion of TB survivors. Multidisciplinary care is essential and includes bronchodilator therapy, infections/complications management and prevention, pulmonary rehabilitation, and, in selected cases, surgical intervention. Despite increasing recognition, standardized diagnostic and therapeutic pathways for PTLD are still lacking, and data on optimal follow-up, rehabilitation strategies, and preventive measures remain limited. Prospective studies, better stratification tools, and patient education initiatives are urgently needed to reduce PTLD morbidity and mortality. This narrative review synthesizes current evidence on PTLD epidemiology, clinical evaluation and management while offering practical suggestions for clinicians taking care of people with TB and addressing research needs.

结核病后肺病(PTLD)是一种日益被认识到的疾病,它严重影响幸存者的生活质量,造成残疾并增加死亡风险。PTLD包括一系列结构性和功能性肺损伤,如阻塞性、限制性和混合性肺损伤、支气管扩张和肺纤维化,这些肺损伤持续存在,无法通过微生物治疗。全球患病率数据强调了PTLD的沉重负担,特别是在高发病率地区,这是由于诊断晚和治疗不理想所致。功能和放射学评估对于及时诊断仍然至关重要,肺活量测定和影像学显示很大一部分结核病幸存者的持续异常。多学科护理是必不可少的,包括支气管扩张剂治疗、感染/并发症的管理和预防、肺部康复,以及在选定的病例中进行手术干预。尽管越来越多的人认识到,PTLD的标准化诊断和治疗途径仍然缺乏,关于最佳随访、康复策略和预防措施的数据仍然有限。迫切需要前瞻性研究、更好的分层工具和患者教育举措来降低PTLD的发病率和死亡率。这篇叙述性综述综合了目前关于PTLD流行病学、临床评估和管理的证据,同时为临床医生照顾结核病患者和满足研究需求提供了切实可行的建议。
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引用次数: 0
Antiviral strategies against H5N1: current options and emerging therapeutics. 针对H5N1的抗病毒策略:当前选择和新出现的治疗方法。
IF 3.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-10-17 DOI: 10.1007/s15010-025-02657-y
Cleo Anastassopoulou, Antonios-Periklis Panagiotopoulos, Kyriaki Ranellou, Ilias Mariolis, Athanasios Tsakris

Highly pathogenic avian influenza A(H5N1) continues to pose a significant threat to global health due to its increasing geographic spread, high mortality in human cases, and expanding host range, including recent mammalian infections. Antiviral therapy remains a key strategy alongside vaccination, especially for controlling outbreaks and limiting disease severity. This article provides a comprehensive, up-to-date overview of antiviral agents with established or investigational activity against H5N1, including both globally approved drugs and regionally licensed compounds, such as arbidol and triazavirin in Russia and laninamivir and favipiravir in Japan. We detail the mechanisms of action, approval status, resistance patterns, and efficacy data in H5N1-specific models. The recent regulatory approvals of onradivir, suraxavir marboxil, and ZX-7101A in China are highlighted, along with emerging antivirals in advanced development. We summarize findings from relevant clinical trials and discuss key resistance-associated mutations identified in recent H5N1 isolates. Although several agents show promise in preclinical studies, clinical data specifically for H5N1 remain nonexistent. Challenges persist around resistance monitoring, access to novel therapies, and regulatory harmonization. Expanding the antiviral armamentarium through accelerated evaluation and integration of both traditional and innovative compounds will be essential to pandemic preparedness and effective H5N1 outbreak response.

高致病性甲型禽流感(H5N1)继续对全球健康构成重大威胁,因为它的地理传播日益扩大,人类病例死亡率高,宿主范围扩大,包括最近的哺乳动物感染。抗病毒治疗仍然是除疫苗接种外的一项关键策略,特别是在控制疫情和限制疾病严重程度方面。本文提供了针对H5N1已确定或正在研究的抗病毒药物的全面、最新概述,包括全球批准的药物和地区许可的化合物,如俄罗斯的阿比多尔和triazavirin以及日本的laninamivir和favipiravir。我们详细介绍了h5n1特异性模型的作用机制、批准状态、耐药性模式和疗效数据。最近在中国获得批准的onradivir, suraxavir marboxil和ZX-7101A,以及处于后期开发的新兴抗病毒药物是重点。我们总结了相关临床试验的发现,并讨论了在最近的H5N1分离株中发现的关键耐药相关突变。尽管一些药物在临床前研究中显示出希望,但专门针对H5N1的临床数据仍然不存在。耐药性监测、获得新疗法和监管协调方面的挑战依然存在。通过加速评估和整合传统和创新化合物来扩大抗病毒装备,对于大流行防备和有效应对H5N1疫情至关重要。
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引用次数: 0
CanDRes: Exploring the Mutation Landscape of Candida and its Role in Antifungal Resistance. 念珠菌:探索念珠菌的突变景观及其在抗真菌耐药性中的作用。
IF 3.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-11-08 DOI: 10.1007/s15010-025-02686-7
Chandan Kumar, Anam Arshi, Anchal Yadav, Prashik Chavan, Susan Idicula-Thomas

Purpose: Candida spp. has emerged as major fungal pathogens, especially in immunocompromised individuals, posing significant challenges in clinical settings. Their growing prevalence and increasing resistance to antifungal agents underscore the urgent need for systematic investigation into resistance mechanisms. Constant monitoring of resistance-associated mutations is essential to mitigate drug resistance and develop effective therapeutic strategies.

Method: We developed CanDRes, a manually curated, open-access resource cataloging mutations linked to antifungal resistance in Candida spp. Mutations were systematically compiled from published literature, focusing on those identified in drug-resistant clinical isolates. Each entry was annotated with gene-level information, drug associations, organism specificity, resistance mechanisms, and evidence-based validation scores. 3D structures of mutant proteins were developed and are available for download from the CanDRes database.

Results: CanDRes encompasses 1053 unique mutations across 56 genes from drug-resistant strains of 13 Candida spp., assessed against 19 antifungal drugs. The database also includes resistance mechanisms, protein sequences, predicted 3D structural models, and mutation plots. These data provide a valuable foundation for understanding molecular resistance patterns and for guiding therapeutic decision-making.

Conclusion: Our study emphasizes the critical need to investigate antifungal resistance in Candida spp., which are among the most clinically challenging fungal pathogens. Understanding the mechanisms driving resistance to frontline antifungals can improve treatment strategies. CanDRes serves as a free and accessible resource for clinicians and researchers aiming to address antifungal resistance. Users can access CanDRes via https://candres.bicnirrh.res.in/ .

目的:念珠菌已经成为主要的真菌病原体,特别是在免疫功能低下的个体中,在临床环境中提出了重大挑战。它们日益流行,对抗真菌药物的耐药性也越来越强,因此迫切需要对其耐药机制进行系统研究。持续监测耐药性相关突变对于减轻耐药性和制定有效的治疗策略至关重要。方法:我们开发了CanDRes,这是一个人工编辑的、开放获取的资源,用于编目念珠菌菌株抗真菌耐药性相关的突变。我们从已发表的文献中系统地汇编了突变,重点是在耐药临床分离株中发现的突变。每个条目都附有基因水平信息、药物关联、生物体特异性、耐药机制和循证验证分数的注释。突变蛋白的三维结构被开发出来,并且可以从CanDRes数据库下载。结果:CanDRes包含来自13种念珠菌耐药菌株的56个基因的1053个独特突变,对19种抗真菌药物进行了评估。该数据库还包括抗性机制、蛋白质序列、预测的3D结构模型和突变图。这些数据为理解分子耐药模式和指导治疗决策提供了宝贵的基础。结论:我们的研究强调了研究念珠菌属抗真菌耐药性的迫切需要,念珠菌属是临床上最具挑战性的真菌病原体之一。了解对一线抗真菌药物产生耐药性的机制可以改善治疗策略。CanDRes为临床医生和研究人员提供免费和可访问的资源,旨在解决抗真菌耐药性问题。用户可以通过https://candres.bicnirrh.res.in/访问CanDRes。
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引用次数: 0
Long-term outcomes after intensive care unit-treated COVID-19, influenza and respiratory sepsis in 2020 - a comparative, population-based cohort study. 2020年重症监护病房治疗COVID-19、流感和呼吸道败血症后的长期结果——一项基于人群的比较队列研究
IF 3.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-02-01 Epub Date: 2025-10-03 DOI: 10.1007/s15010-025-02644-3
Franka E A Joost, Norman Rose, Aurelia Kimmig, Thomas Ruhnke, Patrik Dröge, Antje Freytag, Christian Günster, Mathias W Pletz, Martin Roesler, Philipp A Reuken, Peter Schlattmann, Konrad F R Schmidt, Andreas Stallmach, Josephine Storch, Konrad Reinhart, Lisa Wedekind, Carolin Fleischmann-Struzek

Background: Sepsis survivors are affected by a broad spectrum of long-term impairments, which overlap with Long-Covid and sequelae after influenza in their clinical presentation. However, we lack comparative assessments on the burden of long-term outcomes, particularly with patients being recruited from the same, contemporary patient population. Therefore we compared long-term outcomes after respiratory sepsis (RS), SARS-CoV-2-associated sepsis (SS) and influenza-associated sepsis (IS).

Methods: Retrospective, population-based cohort study. We included patients > 15 years hospitalized with RS, SS and IS between 01/2020 and 12/2020 in Germany, who received intensive care unit treatment. We compared mortality, readmissions, prevalence of diagnoses in the cognitive, psychological or medical domain, and the number of impaired domains in the 12 months post-discharge between the three survivor cohorts, adjusting for between-group differences in relevant covariates by inverse propensity score weighting based on generalized propensity scores.

Results: Our study included 12,854 patients, of which 8,201 were RS, 3,964 SS and 689 IS survivors. RS survivors had a considerably higher risk for 12-month mortality compared to SS and IS survivors (relative risk, 1.77 [95% CI, 1.54-2.03]; P < 0.001 and relative risk, 1.37 [95% CI, 1.14-1.65]; P = 0.001, respectively). They were more often rehospitalized, affected by multiple domain impairments, cognitive decline and impairments related to the severity of acute disease, e.g. complications of the tracheostoma, compared to survivors after SS and IS. RS survivors had a lower risk for being affected by medical diagnoses compared to SS. Risks for psychological diagnoses did not differ between RS and the other survivor groups.

Conclusions: Although respiratory sepsis survivors seem to be affected by more severe long-term impairments, the overall burden of post-acute sequelae among all survivor groups is high. This warrants efforts to provide targeted aftercare for all survivor populations after life-threatening infections.

背景:脓毒症幸存者受到广泛的长期损伤的影响,其临床表现与流感后的长covid和后遗症重叠。然而,我们缺乏对长期结果负担的比较评估,特别是从相同的当代患者人群中招募的患者。因此,我们比较了呼吸道败血症(RS)、sars - cov -2相关败血症(SS)和流感相关败血症(IS)后的长期结局。方法:回顾性、基于人群的队列研究。我们纳入了2020年1月1日至2020年12月期间在德国因RS、SS和IS住院15年的患者,这些患者接受了重症监护病房治疗。我们比较了三个幸存者队列在出院后12个月内的死亡率、再入院率、认知、心理或医学领域诊断的患病率以及受损领域的数量,并通过基于广义倾向评分的逆倾向评分加权来调整相关共变量的组间差异。结果:我们的研究纳入了12,854例患者,其中8,201例RS, 3,964例SS和689例IS幸存者。与SS和IS患者相比,RS患者的12个月死亡率明显更高(相对危险度为1.77 [95% CI, 1.54-2.03]; P结论:尽管呼吸道败血症患者似乎受到更严重的长期损伤的影响,但所有患者组急性后后遗症的总体负担都很高。因此,有必要努力为危及生命的感染后的所有幸存者提供有针对性的善后护理。
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