Wout Arras, Baptiste Oosterlinck, Julie Gassman, Joris G De Man, Aranzazu Jauregui-Amezaga, Benedicte Y De Winter, Annemieke Smet
Background: The intestinal mucosal barrier plays an important role in the pathophysiology of inflammatory bowel disease (IBD), with mucins being key components of this barrier. Classified as either transmembrane or secreted, these highly glycosylated proteins protect the mucosal barrier while also influencing barrier integrity. Given their indispensable role in maintaining the intestinal mucosal barrier, mucins are compelling candidates for the evaluation of barrier dysfunction. Numerous studies have investigated mucins in the context of IBD, but a clear consensus regarding their expression, polymorphisms, and post-translational modifications is missing. This systematic review summarizes mucin alterations at the transcriptional, translational, and post-translational levels in the presence/absence of intestinal inflammation in IBD patients.
Methods: To this end, PubMed, Scopus, and Web of Science were searched for studies published between February 1993 and January 2025, yielding 69 articles eligible for inclusion.
Results: The expression of MUC1, MUC5AC, and MUC6 was reported to be upregulated at both RNA (isoform) and protein level, in contrast to MUC12, which exhibited reduced expression in inflamed mucosa only at RNA isoform level. MUC2 was the only mucin consistently downregulated at the protein level, despite unchanged mRNA expression, whereas polymorphisms of MUC2, MUC3A, MUC4, MUC13, MUC19, MUC21, and MUC22 were associated with susceptibility to Crohn's disease, ulcerative colitis, or IBD in general. Post-translational modifications, such as hypoglycosylation of MUC1 and MUC2, as well as a reduction of mucin sulphation of MUC2 were reported.
Conclusion: Together, these findings underscore the involvement of mucins in IBD and point to their potential as biomarkers for barrier dysfunction.
背景:肠粘膜屏障在炎症性肠病(IBD)的病理生理中起着重要作用,粘蛋白是该屏障的关键成分。这些高度糖基化的蛋白分为跨膜蛋白和分泌蛋白,它们在保护粘膜屏障的同时也影响粘膜屏障的完整性。鉴于粘蛋白在维持肠粘膜屏障中不可或缺的作用,粘蛋白是评估屏障功能障碍的有力候选者。许多研究调查了黏液蛋白在IBD中的作用,但对其表达、多态性和翻译后修饰缺乏明确的共识。本系统综述总结了IBD患者存在/不存在肠道炎症时粘蛋白在转录、翻译和翻译后水平的改变。方法:为此,检索PubMed、Scopus和Web of Science,检索1993年2月至2025年1月间发表的研究,获得69篇符合纳入条件的文章。结果:MUC1、MUC5AC和MUC6的表达在RNA(异构体)和蛋白质水平上均上调,而MUC12仅在RNA异构体水平上在炎症粘膜中表达降低。尽管mRNA表达不变,MUC2是唯一在蛋白水平上持续下调的粘蛋白,而MUC2、MUC3A、MUC4、MUC13、MUC19、MUC21和MUC22的多态性与克罗恩病、溃疡性结肠炎或一般IBD的易感性相关。据报道,翻译后修饰,如MUC1和MUC2的低糖基化,以及MUC2的粘蛋白硫酸化减少。结论:总之,这些发现强调了粘蛋白在IBD中的作用,并指出了它们作为屏障功能障碍生物标志物的潜力。
{"title":"Clinical Significance of Mucin Signatures in Inflammatory Bowel Diseases: A Systematic Review of Their Expression Patterns, Polymorphisms, and Post-translational Modifications.","authors":"Wout Arras, Baptiste Oosterlinck, Julie Gassman, Joris G De Man, Aranzazu Jauregui-Amezaga, Benedicte Y De Winter, Annemieke Smet","doi":"10.1093/ibd/izaf293","DOIUrl":"10.1093/ibd/izaf293","url":null,"abstract":"<p><strong>Background: </strong>The intestinal mucosal barrier plays an important role in the pathophysiology of inflammatory bowel disease (IBD), with mucins being key components of this barrier. Classified as either transmembrane or secreted, these highly glycosylated proteins protect the mucosal barrier while also influencing barrier integrity. Given their indispensable role in maintaining the intestinal mucosal barrier, mucins are compelling candidates for the evaluation of barrier dysfunction. Numerous studies have investigated mucins in the context of IBD, but a clear consensus regarding their expression, polymorphisms, and post-translational modifications is missing. This systematic review summarizes mucin alterations at the transcriptional, translational, and post-translational levels in the presence/absence of intestinal inflammation in IBD patients.</p><p><strong>Methods: </strong>To this end, PubMed, Scopus, and Web of Science were searched for studies published between February 1993 and January 2025, yielding 69 articles eligible for inclusion.</p><p><strong>Results: </strong>The expression of MUC1, MUC5AC, and MUC6 was reported to be upregulated at both RNA (isoform) and protein level, in contrast to MUC12, which exhibited reduced expression in inflamed mucosa only at RNA isoform level. MUC2 was the only mucin consistently downregulated at the protein level, despite unchanged mRNA expression, whereas polymorphisms of MUC2, MUC3A, MUC4, MUC13, MUC19, MUC21, and MUC22 were associated with susceptibility to Crohn's disease, ulcerative colitis, or IBD in general. Post-translational modifications, such as hypoglycosylation of MUC1 and MUC2, as well as a reduction of mucin sulphation of MUC2 were reported.</p><p><strong>Conclusion: </strong>Together, these findings underscore the involvement of mucins in IBD and point to their potential as biomarkers for barrier dysfunction.</p>","PeriodicalId":13623,"journal":{"name":"Inflammatory Bowel Diseases","volume":" ","pages":"375-389"},"PeriodicalIF":4.3,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12857429/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145587339","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yael Haberman, Tzipi Braun, Rebekah Karns, Courtney A Bartel, Erin Bonkowski, Katherine F Simpson, Thomas D Walters, Jeffrey S Hyams, Ta-Chiang Liu, Subra Kugathasan, Lee A Denson, Kelli L VanDussen
Background and aims: Our previous studies of adult Crohn's disease (CD) suggested ileal microvillus length (MVL) as a prognostic biomarker for therapy response. We investigated if ileal MVL also differed in pediatric CD versus controls and tested for associations with stricturing or penetrating disease behavior outcomes.
Methods: We determined the average ileal MVL of 412 CD and 88 control H&E-stained ileal histology samples from a subset of the RISK cohort and 2 validation cohorts. The RISK sub-cohort had an average follow-up of >60 months and was used to test for associations between ileal MVL and clinical data, RNA-seq molecular profiles, and histopathological scores.
Results: Ileal MVL was shorter in CD relative to control (median of 1.396 µm vs. 1.598 µm, respectively). Ileal MVL generally did not associate with demographics or clinical disease activity indices. However, there was a significant association between shorter ileal MVL and increased risk of development of complicated disease behavior. Furthermore, CD samples with shorter ileal MVL showed a significantly shorter time to development of complicated disease behavior. Ileal MVL positively associated with a gene signature enriched for brush border membrane and negatively associated with a gene signature enriched for extracellular matrix, inflamed macrophages, and fibroblasts. Accordingly, ileal MVL was negatively correlated with histopathological scores.
Conclusions: Short ileal MVL is associated with the development of complicated disease behaviors in pediatric CD, supporting the potential use of this histological phenotype as a biomarker for CD prognosis.
{"title":"Short Ileal Microvillus Length Phenotype Associates with Progression from Inflammatory to Complicated Disease Behavior in Pediatric Crohn's Disease.","authors":"Yael Haberman, Tzipi Braun, Rebekah Karns, Courtney A Bartel, Erin Bonkowski, Katherine F Simpson, Thomas D Walters, Jeffrey S Hyams, Ta-Chiang Liu, Subra Kugathasan, Lee A Denson, Kelli L VanDussen","doi":"10.1093/ibd/izaf288","DOIUrl":"10.1093/ibd/izaf288","url":null,"abstract":"<p><strong>Background and aims: </strong>Our previous studies of adult Crohn's disease (CD) suggested ileal microvillus length (MVL) as a prognostic biomarker for therapy response. We investigated if ileal MVL also differed in pediatric CD versus controls and tested for associations with stricturing or penetrating disease behavior outcomes.</p><p><strong>Methods: </strong>We determined the average ileal MVL of 412 CD and 88 control H&E-stained ileal histology samples from a subset of the RISK cohort and 2 validation cohorts. The RISK sub-cohort had an average follow-up of >60 months and was used to test for associations between ileal MVL and clinical data, RNA-seq molecular profiles, and histopathological scores.</p><p><strong>Results: </strong>Ileal MVL was shorter in CD relative to control (median of 1.396 µm vs. 1.598 µm, respectively). Ileal MVL generally did not associate with demographics or clinical disease activity indices. However, there was a significant association between shorter ileal MVL and increased risk of development of complicated disease behavior. Furthermore, CD samples with shorter ileal MVL showed a significantly shorter time to development of complicated disease behavior. Ileal MVL positively associated with a gene signature enriched for brush border membrane and negatively associated with a gene signature enriched for extracellular matrix, inflamed macrophages, and fibroblasts. Accordingly, ileal MVL was negatively correlated with histopathological scores.</p><p><strong>Conclusions: </strong>Short ileal MVL is associated with the development of complicated disease behaviors in pediatric CD, supporting the potential use of this histological phenotype as a biomarker for CD prognosis.</p>","PeriodicalId":13623,"journal":{"name":"Inflammatory Bowel Diseases","volume":" ","pages":"314-327"},"PeriodicalIF":4.3,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12695081/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145632482","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Comment on \"The Severity of Rectal Inflammation and Pouch Surgery Outcome in Patients with Ulcerative Colitis: A Retrospective Cohort Study\".","authors":"Xingmei Yang, Songqian Yang","doi":"10.1093/ibd/izaf253","DOIUrl":"10.1093/ibd/izaf253","url":null,"abstract":"","PeriodicalId":13623,"journal":{"name":"Inflammatory Bowel Diseases","volume":" ","pages":"410-411"},"PeriodicalIF":4.3,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145476907","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Narsimha Keetha Rao, Shahriar Ghodous, Anoop Gurram, Mehrdad Khorasani, Madhusudhan Ponnala, Arman Habibi, Kwame Agyeman, Parsa Saberian, Pubali Biswas, Negin Letafatkar, Simran Joshi, Yasmin Sahli, Reza Amani-Beni, Bahar Darouei, Yussif Issaka, Kiran Sandilya Balivada, Farahnaz Joukar, Amir Nasrollahizadeh, Anderson Ogazi, Mohammad Amin Karimi, Michael T Ulrich, Mohammad-Hossein Keivanlou, Mohammad-Javad Khosousi, Seyyed Mohammad Hashemi, Ehsan Amini-Salehi, Sandeep S Nayak
<p><strong>Background: </strong>Nonalcoholic fatty liver disease (NAFLD) has become the most prevalent chronic liver condition worldwide, with its burden increasingly recognized among individuals with inflammatory bowel disease (IBD). The complex interplay between chronic intestinal inflammation, metabolic dysregulation, and hepatic pathology has heightened concern about the susceptibility of IBD patients to NAFLD. This study aims to systematically evaluate the global prevalence of NAFLD among patients with IBD and to identify key demographic, geographic, clinical, and pharmacologic factors associated with its development.</p><p><strong>Methods: </strong>A comprehensive search of four electronic databases-PubMed, Embase, Scopus, and Web of Science-was conducted up to January 21, 2025. Eligible studies included observational research reporting the prevalence of NAFLD in patients with IBD. Random-effects meta-analysis was used to estimate the pooled prevalence of NAFLD. In addition, subgroup analyses and meta-regression were conducted to investigate potential sources of heterogeneity and identify associated demographic, clinical, and geographic factors.</p><p><strong>Results: </strong>A total of 64 studies comprising 1 532 811 individuals were included. The pooled global prevalence of NAFLD in IBD patients was 25.4% (95% CI: 23.1%-27.8%). Prevalence was higher in adults (26.0%, 95% CI: 24.0%-29.0%) than in pediatric patients (7.0%, 95% CI: 1.0-16.0). Among males and females, prevalence was 32.1% (95% CI: 29.3%-36.0%) and 22.9% (95% CI: 20.2%-25.7%), respectively. Among IBD subtypes, the prevalence was 21.4% in ulcerative colitis (UC; 95% CI: 15.2%-28.3%) and 22.8% in Crohn's disease (CD; 95% CI: 20.0%-25.0%). Geographic variation was substantial, ranging from 16.0% in Asia (95% CI: 10.0%-25.0%) to 32.0% in Europe (95% CI: 27.0%-38.0%) and Africa (95% CI: 10.0%-57.0%). NAFLD prevalence was also influenced by diagnostic method, with higher rates using transient elastography (38.0%, 95% CI: 27.0%-49.0%) and liver biopsy (37.0%, 95% CI: 17.0%-59.0%). By disease location, the highest NAFLD prevalence in CD was in patients with upper GI involvement (67.0%, 95% CI: 1%-99.0%), while the lowest was in ileo-colonic disease (21.0%, 95% CI: 12.0%-32.0%). For UC, prevalence ranged from 27.0% (95% CI: 17.0%-39.0%) in left-sided colitis to 18.0% (95% CI: 8.0%-29.0%) in proctosigmoiditis. No significant association with NAFLD was observed for any IBD medication analyzed, including 5-aminosalicylic acid (5-ASA; OR: 0.85, 95% CI: 0.69-1.05; P = .15), azathioprine (OR: 1.04, 95% CI: 0.78-1.40; P = .76), vedolizumab (OR: 0.81, 95% CI: 0.45-1.44; P = .48), Ustekinumab (OR: 1.03, 95% CI: 0.58-1.82; P = .90), anti-TNF agents (OR: 1.20, 95% CI: 0.85-1.68; P = .28), and systemic corticosteroids (OR: 1.43, 95% CI: 0.89-2.32; P = .13).</p><p><strong>Conclusion: </strong>NAFLD is a common comorbidity among patients with IBD, affecting over one in four individuals, with higher
{"title":"Prevalence and Associated Factors of Nonalcoholic Fatty Liver Disease in Patients with Inflammatory Bowel Disease: An Updated Global Systematic Review and Meta-Analysis of over 1.5 Million Individuals.","authors":"Narsimha Keetha Rao, Shahriar Ghodous, Anoop Gurram, Mehrdad Khorasani, Madhusudhan Ponnala, Arman Habibi, Kwame Agyeman, Parsa Saberian, Pubali Biswas, Negin Letafatkar, Simran Joshi, Yasmin Sahli, Reza Amani-Beni, Bahar Darouei, Yussif Issaka, Kiran Sandilya Balivada, Farahnaz Joukar, Amir Nasrollahizadeh, Anderson Ogazi, Mohammad Amin Karimi, Michael T Ulrich, Mohammad-Hossein Keivanlou, Mohammad-Javad Khosousi, Seyyed Mohammad Hashemi, Ehsan Amini-Salehi, Sandeep S Nayak","doi":"10.1093/ibd/izaf226","DOIUrl":"10.1093/ibd/izaf226","url":null,"abstract":"<p><strong>Background: </strong>Nonalcoholic fatty liver disease (NAFLD) has become the most prevalent chronic liver condition worldwide, with its burden increasingly recognized among individuals with inflammatory bowel disease (IBD). The complex interplay between chronic intestinal inflammation, metabolic dysregulation, and hepatic pathology has heightened concern about the susceptibility of IBD patients to NAFLD. This study aims to systematically evaluate the global prevalence of NAFLD among patients with IBD and to identify key demographic, geographic, clinical, and pharmacologic factors associated with its development.</p><p><strong>Methods: </strong>A comprehensive search of four electronic databases-PubMed, Embase, Scopus, and Web of Science-was conducted up to January 21, 2025. Eligible studies included observational research reporting the prevalence of NAFLD in patients with IBD. Random-effects meta-analysis was used to estimate the pooled prevalence of NAFLD. In addition, subgroup analyses and meta-regression were conducted to investigate potential sources of heterogeneity and identify associated demographic, clinical, and geographic factors.</p><p><strong>Results: </strong>A total of 64 studies comprising 1 532 811 individuals were included. The pooled global prevalence of NAFLD in IBD patients was 25.4% (95% CI: 23.1%-27.8%). Prevalence was higher in adults (26.0%, 95% CI: 24.0%-29.0%) than in pediatric patients (7.0%, 95% CI: 1.0-16.0). Among males and females, prevalence was 32.1% (95% CI: 29.3%-36.0%) and 22.9% (95% CI: 20.2%-25.7%), respectively. Among IBD subtypes, the prevalence was 21.4% in ulcerative colitis (UC; 95% CI: 15.2%-28.3%) and 22.8% in Crohn's disease (CD; 95% CI: 20.0%-25.0%). Geographic variation was substantial, ranging from 16.0% in Asia (95% CI: 10.0%-25.0%) to 32.0% in Europe (95% CI: 27.0%-38.0%) and Africa (95% CI: 10.0%-57.0%). NAFLD prevalence was also influenced by diagnostic method, with higher rates using transient elastography (38.0%, 95% CI: 27.0%-49.0%) and liver biopsy (37.0%, 95% CI: 17.0%-59.0%). By disease location, the highest NAFLD prevalence in CD was in patients with upper GI involvement (67.0%, 95% CI: 1%-99.0%), while the lowest was in ileo-colonic disease (21.0%, 95% CI: 12.0%-32.0%). For UC, prevalence ranged from 27.0% (95% CI: 17.0%-39.0%) in left-sided colitis to 18.0% (95% CI: 8.0%-29.0%) in proctosigmoiditis. No significant association with NAFLD was observed for any IBD medication analyzed, including 5-aminosalicylic acid (5-ASA; OR: 0.85, 95% CI: 0.69-1.05; P = .15), azathioprine (OR: 1.04, 95% CI: 0.78-1.40; P = .76), vedolizumab (OR: 0.81, 95% CI: 0.45-1.44; P = .48), Ustekinumab (OR: 1.03, 95% CI: 0.58-1.82; P = .90), anti-TNF agents (OR: 1.20, 95% CI: 0.85-1.68; P = .28), and systemic corticosteroids (OR: 1.43, 95% CI: 0.89-2.32; P = .13).</p><p><strong>Conclusion: </strong>NAFLD is a common comorbidity among patients with IBD, affecting over one in four individuals, with higher","PeriodicalId":13623,"journal":{"name":"Inflammatory Bowel Diseases","volume":" ","pages":"350-374"},"PeriodicalIF":4.3,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145307910","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Eva Vermeer, Femke M Prins, Iwan J Hidding, Jasmijn Z Jagt, Robert de Jonge, Marc A Benninga, Ranko Gacesa, Rinse K Weersma, Nanne K H de Boer, Tim G J de Meij
Background and aims: Microbiome studies reveal distinct microbial differences in inflammatory bowel disease (IBD), indicating its potential role in pathophysiology and as a noninvasive diagnostic biomarker. This study aims to profile the gut microbiome in children with IBD, compared to both healthy controls (HC) and controls with gastrointestinal symptoms (CGI), and to assess the potential of microbiome profiles as noninvasive diagnostic markers for de novo treatment-naïve pediatric IBD, and as early predictive markers for therapy response.
Methods: We analyzed baseline fecal samples and clinical data from 103 therapy-naïve children with IBD, 75 CGI, and 356 age and sex matched HC. Metagenomic sequencing was performed, and prediction models assessed diagnostic potential and prediction of induction therapy response at 3 months.
Results: Alpha diversity progressively decreased from HC to CGI (P < .001) and decreased even further in IBD patients (P = .0056). Beta diversity analysis showed significant clustering differences (P < .001, R2 = 0.045). Differential abundance analysis revealed 116 species differing between HC and IBD, and 30 species between CGI and IBD. Prediction models based on microbiome features accurately distinguished IBD from HC (area under the curve [AUC] = 0.96) and from CGI (AUC = 0.71). However, these models were outperformed by clinical features, such as fecal calprotectin. Microbiome-based prediction of response to induction therapy in general showed limited accuracy (AUC = 0.63), as well as for response to nutritional induction therapy (AUC = 0.67).
Conclusions: We observed profound gut microbiome differences between de novo, therapy-naïve pediatric IBD patients and controls. While microbiome profiles hold promise for improving diagnostic precision, their predictive value for therapy response seems limited.
{"title":"Metagenomic Sequencing Reveals Distinct Gut Microbiome Profiles in Therapy-Naïve de Novo Pediatric Inflammatory Bowel Disease.","authors":"Eva Vermeer, Femke M Prins, Iwan J Hidding, Jasmijn Z Jagt, Robert de Jonge, Marc A Benninga, Ranko Gacesa, Rinse K Weersma, Nanne K H de Boer, Tim G J de Meij","doi":"10.1093/ibd/izaf184","DOIUrl":"10.1093/ibd/izaf184","url":null,"abstract":"<p><strong>Background and aims: </strong>Microbiome studies reveal distinct microbial differences in inflammatory bowel disease (IBD), indicating its potential role in pathophysiology and as a noninvasive diagnostic biomarker. This study aims to profile the gut microbiome in children with IBD, compared to both healthy controls (HC) and controls with gastrointestinal symptoms (CGI), and to assess the potential of microbiome profiles as noninvasive diagnostic markers for de novo treatment-naïve pediatric IBD, and as early predictive markers for therapy response.</p><p><strong>Methods: </strong>We analyzed baseline fecal samples and clinical data from 103 therapy-naïve children with IBD, 75 CGI, and 356 age and sex matched HC. Metagenomic sequencing was performed, and prediction models assessed diagnostic potential and prediction of induction therapy response at 3 months.</p><p><strong>Results: </strong>Alpha diversity progressively decreased from HC to CGI (P < .001) and decreased even further in IBD patients (P = .0056). Beta diversity analysis showed significant clustering differences (P < .001, R2 = 0.045). Differential abundance analysis revealed 116 species differing between HC and IBD, and 30 species between CGI and IBD. Prediction models based on microbiome features accurately distinguished IBD from HC (area under the curve [AUC] = 0.96) and from CGI (AUC = 0.71). However, these models were outperformed by clinical features, such as fecal calprotectin. Microbiome-based prediction of response to induction therapy in general showed limited accuracy (AUC = 0.63), as well as for response to nutritional induction therapy (AUC = 0.67).</p><p><strong>Conclusions: </strong>We observed profound gut microbiome differences between de novo, therapy-naïve pediatric IBD patients and controls. While microbiome profiles hold promise for improving diagnostic precision, their predictive value for therapy response seems limited.</p>","PeriodicalId":13623,"journal":{"name":"Inflammatory Bowel Diseases","volume":" ","pages":"207-219"},"PeriodicalIF":4.3,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12857426/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145091513","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Systemic lupus erythematosus (SLE) and inflammatory bowel disease (IBD) are both categorized as autoimmune disorders and have similar non-specific gastrointestinal symptoms. SLE and IBD have shown shared genetic architecture in European ancestry; however, given the ancestry-specificity of genetic architecture, the shared genetic structure in East Asian ancestry remains unclear. This study reveals significant global and local genetic overlap between SLE and IBD subtypes in East Asian ancestry by using genetic correlation analyses. Cross-trait and colocalization analyses identify 64 shared loci and 19 causal variant credible sets between SLE and IBD subtypes. Notably, pleiotropic genes (HIC2, UBE2L3, ARAP1, ATG16L2, ANKS1A, and TULP1) were validated through Gene Expression Omnibus databases and previous studies. The major histocompatibility complex region emerges as a critical hub for shared genetic correlations and pleiotropic effects in SLE-IBD pathogenesis. Gene-level enrichment analyses implicate chemokine and lipid binding as underlying shared biological mechanisms.
{"title":"Shared Genetic Basis Between Systemic Lupus Erythematosus and Inflammatory Bowel Disease in East Asian Ancestry: A Genome-Wide Cross-trait Analysis.","authors":"Xiaoxiao Mo, Hui Mo, Chao Wang, Qiuyi Pu, Lanlan Sha, Letian Zhao, Zhengdong Zhang, Ting Wang, Dongmei Wu","doi":"10.1093/ibd/izaf297","DOIUrl":"10.1093/ibd/izaf297","url":null,"abstract":"<p><p>Systemic lupus erythematosus (SLE) and inflammatory bowel disease (IBD) are both categorized as autoimmune disorders and have similar non-specific gastrointestinal symptoms. SLE and IBD have shown shared genetic architecture in European ancestry; however, given the ancestry-specificity of genetic architecture, the shared genetic structure in East Asian ancestry remains unclear. This study reveals significant global and local genetic overlap between SLE and IBD subtypes in East Asian ancestry by using genetic correlation analyses. Cross-trait and colocalization analyses identify 64 shared loci and 19 causal variant credible sets between SLE and IBD subtypes. Notably, pleiotropic genes (HIC2, UBE2L3, ARAP1, ATG16L2, ANKS1A, and TULP1) were validated through Gene Expression Omnibus databases and previous studies. The major histocompatibility complex region emerges as a critical hub for shared genetic correlations and pleiotropic effects in SLE-IBD pathogenesis. Gene-level enrichment analyses implicate chemokine and lipid binding as underlying shared biological mechanisms.</p>","PeriodicalId":13623,"journal":{"name":"Inflammatory Bowel Diseases","volume":" ","pages":"328-338"},"PeriodicalIF":4.3,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145632126","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Suzanne I Anjie, Geert R D'Haens, Filip Baert, Peter Bossuyt, Frank Hoentjen, Esmé Clasquin, Tamás Molnár, Mark Löwenberg, Séverine Vermeire, J Carl Panetta, Thierry Dervieux
{"title":"Higher Vedolizumab Clearance Associates with Poor Therapeutic Outcomes during Intravenous Vedolizumab Maintenance Therapy in Crohn's Disease.","authors":"Suzanne I Anjie, Geert R D'Haens, Filip Baert, Peter Bossuyt, Frank Hoentjen, Esmé Clasquin, Tamás Molnár, Mark Löwenberg, Séverine Vermeire, J Carl Panetta, Thierry Dervieux","doi":"10.1093/ibd/izaf255","DOIUrl":"10.1093/ibd/izaf255","url":null,"abstract":"","PeriodicalId":13623,"journal":{"name":"Inflammatory Bowel Diseases","volume":" ","pages":"390-393"},"PeriodicalIF":4.3,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12857423/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145481812","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Giulia Valdiserra, Massimo C Fantini, Agnese Favale, Luca Antonioli
This commentary examines the progressive decline in biologic efficacy in inflammatory bowel disease, highlighting pharmacologic, immunologic, and cellular mechanisms of resistance. It advocates for early, biomarker-guided, and mechanistically informed sequencing to preserve long-term therapeutic response and overcome the emerging "therapeutic ceiling."
{"title":"The Importance of Treatment Timing and Positioning in IBD.","authors":"Giulia Valdiserra, Massimo C Fantini, Agnese Favale, Luca Antonioli","doi":"10.1093/ibd/izaf282","DOIUrl":"10.1093/ibd/izaf282","url":null,"abstract":"<p><p>This commentary examines the progressive decline in biologic efficacy in inflammatory bowel disease, highlighting pharmacologic, immunologic, and cellular mechanisms of resistance. It advocates for early, biomarker-guided, and mechanistically informed sequencing to preserve long-term therapeutic response and overcome the emerging \"therapeutic ceiling.\"</p>","PeriodicalId":13623,"journal":{"name":"Inflammatory Bowel Diseases","volume":" ","pages":"401-403"},"PeriodicalIF":4.3,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145512462","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Nabeel Khan, Ramaswamy Sundararajan, Dhruvan Patel, Manthankumar Patel, Janak Bahirwani, Nadim Mahmud
Background: There is paucity of data on the risk of infection-related hospitalization among inflammatory bowel disease (IBD) patients exposed to newer biologics. Our aim was to assess the overall and comparative risk of infection-related hospitalization, among IBD patients exposed to different IBD medication classes.
Methods: This was a retrospective cohort study of adult IBD patients in the Veterans Health Administration. New initiators of different IBD medication classes were identified, and the primary outcome was infection requiring hospitalization. Survival analysis methods were used to evaluate the association between time-updated IBD medications and these outcomes, adjusted for key confounders.
Results: The cohort included 14 554 IBD patients. There were 3131 infection hospitalizations over a median follow-up of 49.5 months (interquartile range, 21.2-60.0 months). No other class of medication was associated with a statistically significant difference in the risk of acquiring an infection-related hospitalization compared with patients exposed to a combination therapy of anti-tumor necrosis factor (TNF) inhibitors and thiopurines (TPs). There was a significantly increased risk of gastrointestinal infections with vedolizumab (hazard ration, 1.42; 95% confidence interval, 1.13-1.80; P = .003) relative to anti-TNF inhibitors + TPs. Anti-TNF inhibitor monotherapy had a lower risk when compared with vedolizumab.
Conclusions: In this nationwide IBD cohort, there was not an increased risk of infection-related hospitalization among patients exposed to vedolizumab, ustekinumab, and tofacitinib as compared with patients on anti-TNF inhibitor and TP combination therapy and rates of infection-related hospitalization were low overall. These findings should guide clinical decision making and patient-physician discussions when selecting a therapeutic agent with the primary emphasis on efficacy.
{"title":"Comparative Risk of Serious Infections Associated With Treatment of Inflammatory Bowel Disease.","authors":"Nabeel Khan, Ramaswamy Sundararajan, Dhruvan Patel, Manthankumar Patel, Janak Bahirwani, Nadim Mahmud","doi":"10.1093/ibd/izaf218","DOIUrl":"10.1093/ibd/izaf218","url":null,"abstract":"<p><strong>Background: </strong>There is paucity of data on the risk of infection-related hospitalization among inflammatory bowel disease (IBD) patients exposed to newer biologics. Our aim was to assess the overall and comparative risk of infection-related hospitalization, among IBD patients exposed to different IBD medication classes.</p><p><strong>Methods: </strong>This was a retrospective cohort study of adult IBD patients in the Veterans Health Administration. New initiators of different IBD medication classes were identified, and the primary outcome was infection requiring hospitalization. Survival analysis methods were used to evaluate the association between time-updated IBD medications and these outcomes, adjusted for key confounders.</p><p><strong>Results: </strong>The cohort included 14 554 IBD patients. There were 3131 infection hospitalizations over a median follow-up of 49.5 months (interquartile range, 21.2-60.0 months). No other class of medication was associated with a statistically significant difference in the risk of acquiring an infection-related hospitalization compared with patients exposed to a combination therapy of anti-tumor necrosis factor (TNF) inhibitors and thiopurines (TPs). There was a significantly increased risk of gastrointestinal infections with vedolizumab (hazard ration, 1.42; 95% confidence interval, 1.13-1.80; P = .003) relative to anti-TNF inhibitors + TPs. Anti-TNF inhibitor monotherapy had a lower risk when compared with vedolizumab.</p><p><strong>Conclusions: </strong>In this nationwide IBD cohort, there was not an increased risk of infection-related hospitalization among patients exposed to vedolizumab, ustekinumab, and tofacitinib as compared with patients on anti-TNF inhibitor and TP combination therapy and rates of infection-related hospitalization were low overall. These findings should guide clinical decision making and patient-physician discussions when selecting a therapeutic agent with the primary emphasis on efficacy.</p>","PeriodicalId":13623,"journal":{"name":"Inflammatory Bowel Diseases","volume":" ","pages":"199-206"},"PeriodicalIF":4.3,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12857427/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145307924","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lorenzo Bertani, Davide Giuseppe Ribaldone, Fabrizio Bossa, Maria Guerra, Monica Annese, Raffaele Manta, Angelo Armandi, Gian Paolo Caviglia, Alessia Todeschini, Angela Variola
{"title":"Reply: \"Early Switching to Subcutaneous Infliximab as a Pragmatic Strategy for Optimized Inflammatory Bowel Disease Care\".","authors":"Lorenzo Bertani, Davide Giuseppe Ribaldone, Fabrizio Bossa, Maria Guerra, Monica Annese, Raffaele Manta, Angelo Armandi, Gian Paolo Caviglia, Alessia Todeschini, Angela Variola","doi":"10.1093/ibd/izaf264","DOIUrl":"10.1093/ibd/izaf264","url":null,"abstract":"","PeriodicalId":13623,"journal":{"name":"Inflammatory Bowel Diseases","volume":" ","pages":"414-415"},"PeriodicalIF":4.3,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145687405","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}