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Delving into Roccaverano PDO cheese: A comprehensive examination of microbial diversity and flavour profiles compared to non-PDO cheeses 深入研究罗卡维拉诺PDO奶酪:与非PDO奶酪相比,微生物多样性和风味概况的全面检查。
IF 5 1区 农林科学 Q1 FOOD SCIENCE & TECHNOLOGY Pub Date : 2025-02-02 DOI: 10.1016/j.ijfoodmicro.2024.111014
Davide Buzzanca, Manuela Giordano, Elisabetta Chiarini, Ilario Ferrocino, Luca Cocolin, Giuseppe Zeppa, Valentina Alessandria
Roccaverano Protected Designation of Origin (PDO) is a fresh soft cheese produced in Roccaverano area (Italy). This study aimed to evaluate Roccaverano PDO microbiota, together with aromatic profile and sensory analysis to be compared with 15 non-PDO cheeses of the same type. Microbiota was evaluated through shotgun metagenomics sequencing, while GC–MS analysis was conducted to study volatile organic compounds (VOCs) presence and concentration. Sensory analyses were conducted through ONAF (Italian National Organization of Cheese Tasters) evaluation parameters followed by flash profile sensory analysis of selected cheeses.
The results demonstrated Lactococcus lactis predominance in both non-PDO and PDO cheeses, while Streptococcus thermophilus was more abundant in non-PDO group. A higher abundance of Kluyveromyces lactis was observed in Roccaverano PDO, which exhibited greater fungal diversity compared to non-PDO cheeses. Metagenome-Assembled Genomes of 26 L. lactis and 19 Leuconostoc mesenteroides showed absence of significant differences in terms of average nucleotide identity and pangenomes partitions. The ONAF sensory evaluation demonstrated a higher average score of Roccaverano PDO group. Flash profile analysis demonstrated that lactic aroma/odour, acid, astringent, vegetal odour, exotic fruit and fermented aroma, hazelnut flavour and sweet were associated with high ONAF scores. The concentration of butanoic acid, 2-methyl-, ethyl ester and butanoic acid, 3-methyl- (sweat, acid, rancid related) were higher in PDO cheeses, while reads related to butanoate metabolism were less abundant compared to non-PDO samples. Several fungal species (included K. lactis) were associated with astringents, acid and chalky flavours. Roccaverano PDO demonstrates unique characteristics even maintaining a certain degree of variability between samples.
罗卡韦拉诺原产地名称保护奶酪(PDO)是一种产自意大利罗卡韦拉诺地区的新鲜软质奶酪。这项研究的目的是评估罗卡韦拉诺 PDO 微生物群以及芳香特征和感官分析,并与 15 种非 PDO 同类奶酪进行比较。微生物群通过霰弹枪元基因组测序进行评估,而 GC-MS 分析则是为了研究挥发性有机化合物 (VOC) 的存在和浓度。感官分析是通过ONAF(意大利国家奶酪品尝师组织)的评估参数进行的,然后对选定的奶酪进行闪光轮廓感官分析。结果表明,乳酸乳球菌在非标明乳酪和标明乳酪中都占主导地位,而嗜热链球菌在非标明乳酪组中含量更高。在 Roccaverano PDO 中观察到更多的乳酸克鲁维酵母菌,与非 PDO 奶酪相比,PDO 奶酪表现出更高的真菌多样性。26 个乳酸菌和 19 个中肠白色念珠菌的元基因组组装基因组显示,在平均核苷酸同一性和泛基因组分区方面没有显著差异。ONAF感官评估显示,罗卡韦拉诺 PDO 组的平均得分更高。闪光曲线分析表明,乳酸香气/臭味、酸味、涩味、植物气味、异国水果和发酵香气、榛子味和甜味与较高的ONAF得分相关。2-甲基丁酸乙酯和3-甲基丁酸(汗味、酸味、酸败味)的浓度在PDO奶酪中较高,而与非PDO样品相比,与丁酸代谢有关的读数较少。有几种真菌(包括乳酸杆菌)与涩味、酸味和白垩味有关。尽管不同样品之间存在一定程度的差异,但罗卡维拉诺 PDO 仍表现出独特的特征。
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引用次数: 0
Determination of hepatitis E virus inactivation during manufacturing of spreadable pork liver sausage and salami-like raw pork sausage 猪肝肠和腊肠样生猪肉肠制作过程中戊型肝炎病毒灭活的测定。
IF 5 1区 农林科学 Q1 FOOD SCIENCE & TECHNOLOGY Pub Date : 2025-02-02 DOI: 10.1016/j.ijfoodmicro.2024.111018
Katja Schilling-Loeffler , Dirk Meyer , Alexander Wolff , Jorge Santamaría-Palacios , Felix Reich , Reimar Johne
The zoonotic hepatitis E virus (HEV) can cause acute and chronic hepatitis in humans. Meat from domestic pigs, which represent a major animal reservoir of HEV, plays a key role in HEV transmission. Although pork meat products can contain HEV-RNA, it is unknown whether infectious HEV is still present after their manufacturing process. Here, we used a newly developed method for virus extraction from sausages and a quantitative method for detecting HEV infectivity in artificially contaminated sausages to investigate the HEV inactivation during production of spreadable pork liver sausage and salami-like raw pork sausage.
The cell culture-adapted HEV genotype 3c strain 47832c was used to contaminate meat preparations intended for production of sausages, which were manufactured based on recipes commonly used in Germany. According to these recipes, spreadable liver sausages of a certain diameter are to be held in a water bath at 70 °C for 30 min. Therefore, the HEV inoculated liver sausage preparations were filled into conical tubes and heated in a 70 °C water bath. After 21 min, the sausages reached a core temperature of 70 °C and samples were taken after further incubation for up to 18 min. For the raw sausages, the HEV inoculated meat preparation was filled into natural casings and sausages were cured at 18 °C and 80 % relative humidity. Samples were taken for up to 21 days. HEV was extracted from all samples, which were quantitatively analyzed for infectious virus and viral RNA using cell culture and RT-qPCR, respectively.
During liver sausage production, infectious HEV decreased by four log10 immediately after reaching the core temperature of 70 °C and was completely inactivated (>4.3 log10 decrease) 2 min later (23 min heat treatment). In contrast, the HEV-RNA amount decreased only marginally (<0.6 log10) throughout the whole incubation time. During raw sausage manufacturing, infectious HEV decreased only slightly (<1.3 log10) over three weeks of curing, while the HEV-RNA amount remained unchanged.
It can be concluded that the intended heating regime during production of spreadable liver sausages leads to an inactivation of HEV, indicating a low risk of HEV infection for consumers if these sausages are manufactured properly. In contrast, HEV was only slightly inactivated during production of salami-like raw pork sausage. Therefore, raw sausage can contain infectious HEV if starting material with a high HEV amount was used for production. Viral RNA testing cannot be used to predict infectivity of HEV in meat products.
人畜共患戊型肝炎病毒(HEV)可引起人类急性和慢性肝炎。家猪是戊肝病毒的主要动物宿主,其肉在戊肝病毒传播中起关键作用。虽然猪肉产品可能含有HEV- rna,但不清楚在其生产过程后是否仍存在传染性HEV。本研究采用新建立的香肠病毒提取方法和人工污染香肠中HEV传染性的定量检测方法,对可涂猪肝香肠和仿萨拉米生猪肉香肠生产过程中HEV灭活情况进行了研究。采用细胞培养适应的HEV基因型3c 47832c菌株污染用于生产香肠的肉类制剂,这些香肠是根据德国常用的配方生产的。根据这些配方,将一定直径的可涂抹肝肠放在70℃的水浴中保温30分钟。因此,将接种了HEV的肝肠制剂装入锥形管中,在70℃的水浴中加热。21分钟后,香肠达到70°C的核心温度,进一步孵育18分钟后采集样品。对于生香肠,将接种了HEV的肉类制剂填充到天然肠衣中,并在18°C和80%相对湿度下腌制香肠。样本采集时间长达21天。从所有样品中提取HEV,分别采用细胞培养和RT-qPCR定量分析感染性病毒和病毒RNA。在肝肠生产过程中,感染性HEV在达到核心温度70℃后立即降低4 log10,并在2 min后(热处理23 min)完全失活(降低4.3 log10)。相比之下,在整个孵育时间内,HEV-RNA的数量仅略有下降(10)。在生香肠制作过程中,感染性HEV在三周的腌制过程中仅略有下降(10),而HEV- rna的数量保持不变。可以得出的结论是,在制作可涂抹肝香肠的过程中,预期的加热制度会导致HEV失活,这表明如果这些香肠生产得当,消费者感染HEV的风险很低。相比之下,在生产类似腊肠的生猪肉香肠时,HEV仅被轻微灭活。因此,如果使用高HEV量的原料生产,生香肠可能含有传染性HEV。病毒RNA检测不能用于预测肉制品中戊肝病毒的传染性。
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引用次数: 0
Molecular epidemiology and antimicrobial resistance of Vibrio parahaemolyticus isolates from the Pearl River Delta region, China 珠江三角洲地区副溶血性弧菌分离株的分子流行病学及耐药性研究。
IF 5 1区 农林科学 Q1 FOOD SCIENCE & TECHNOLOGY Pub Date : 2025-02-02 DOI: 10.1016/j.ijfoodmicro.2024.111025
Qianru Wang , Qingmei Li , Fangzhu Ouyang , Bixia Ke , Shiqin Jiang , Jiajun Liu , Jin Yan , Baisheng Li , Wei Tan , Dongmei He
The Pearl River Delta (PRD) region in southern China is a densely populated area and a hotspot for Vibrio parahaemolyticus infections. However, systematic research on this pathogen, particularly comparing clinical and environmental strains, remains limited. This study analyzed the molecular epidemiology and antimicrobial resistance of 200 V. parahaemolyticus isolates from 12 cities in the PRD region from 2022 to 2023. The results indicated that the most prevalent serotypes were O3:K6 (39.5 %) and O10:K4 (27.5 %), predominantly found in clinical isolates. Most clinical isolates exhibited the characteristics of toxRS/new+, tdh+, and trh, along with the sequence type 3 (ST3), while environmental isolates did not possess these genetic markers. Antimicrobial susceptibility testing showed that although clinically recommended antibiotics remain effective, some isolates have exhibited resistance, with environmental isolates displaying higher rates of antimicrobial resistance than clinical isolates. Moreover, a total of 26 antibiotic resistance genes (ARGs) associated with 10 antibiotic categories were identified, showing variations in distribution patterns among isolates from different sources. Phylogenetic analysis indicated that clinical isolates formed a distinct lineage, contrasting with the greater diversity observed in environmental isolates. Whole-genome analysis further revealed significant differences in pathogenicity-related genes between the two groups, with genes associated with biofilm formation and antimicrobial resistance being more commonly found in environmental isolates. These findings underscore the genetic variability and distinct patterns of antimicrobial resistance between clinical and environmental V. parahaemolyticus strains, highlighting the need for ongoing surveillance and targeted interventions to effectively address foodborne illnesses.
中国南部的珠江三角洲地区是人口稠密地区,也是副溶血性弧菌感染的热点地区。然而,对这种病原体的系统研究,特别是比较临床菌株和环境菌株,仍然有限。本研究分析了2022 - 2023年珠三角地区12个城市分离的200株副溶血性弧菌的分子流行病学和耐药性。结果表明,临床分离株以O3:K6(39.5%)和O10:K4(27.5%)血清型为主;大多数临床分离株表现为toxRS/new+、tdh+和trh-特征,并伴有3型序列(ST3),而环境分离株不具有这些遗传标记。抗菌药物敏感性试验显示,尽管临床推荐的抗生素仍然有效,但一些分离株已表现出耐药性,环境分离株的耐药率高于临床分离株。此外,共鉴定出与10种抗生素类别相关的26个抗生素耐药基因(ARGs),显示出不同来源分离株的分布模式差异。系统发育分析表明,临床分离株形成了一个独特的谱系,与环境分离株形成了更大的多样性。全基因组分析进一步揭示了两组之间致病性相关基因的显著差异,与生物膜形成和抗菌素耐药性相关的基因更常见于环境分离株。这些发现强调了临床和环境副溶血性弧菌菌株之间抗菌素耐药性的遗传变异性和不同模式,强调了持续监测和有针对性干预的必要性,以有效解决食源性疾病。
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引用次数: 0
Antimicrobial properties of Bifidobacterium animalis subsp. lactis Bb-12 paraprobiotic obtained using ohmic heating against Salmonella enterica: A metabolomic approach 利用欧姆加热法获得的动物双歧杆菌亚种乳杆菌 Bb-12 副生素对肠炎沙门氏菌的抗菌特性:代谢组学方法
IF 5 1区 农林科学 Q1 FOOD SCIENCE & TECHNOLOGY Pub Date : 2025-02-02 DOI: 10.1016/j.ijfoodmicro.2024.111016
Mahmoud Yolmeh , Mauricio Luis Sforça , Anderson S. Sant'Ana
This study aimed to obtain paraprobiotics from Bifidobacterium animalis subsp. lactis Bb-12 (BB) presenting optimized antimicrobial activity against Salmonella enterica (SE). The paraprobiotics of BB (BBP) were obtained using ohmic heating (OH) under different conditions, and their effects on critical features of Salmonella, such as bacterial growth, biofilm formation, and adherence to Caco-2 cells, were studied. In addition, a metabolomic analysis was performed using 1H NMR spectroscopy to identify the metabolites involved in antimicrobial activity against SE. Through an optimization approach, it was found that the linear model demonstrated the highest predictive potential for the antimicrobial activity (AMA) of BBP among the fitted models. In contrast, the quadratic model was more predictive for the antibiofilm activity (ABA) and anti-adherence activity (AAA). The highest effects on the AMA, ABA, and AAA of BBP were associated with the variables electric field (EF), OH time, and OH temperature, respectively. Glycerol (37.6 μmol/g), ethanol (22.6 μmol/g), and lactate (9.8 μmol/g) were measured as the main metabolites in BB, while glycerol (47.8 μmol/g), acetate (34.0 μmol/g), and lactate (24.6 μmol/g) were the main metabolites in BBP. All the anti-SE characteristics of BBP obtained under the optimal conditions of the OH process were higher than those of BB (the untreated sample), which could be related to the higher levels of detected metabolites. The OH process, EF of 8.7 V/cm, OH temperature of 88 °C, cell concentration of 8.7 log CFU/mL, and OH time of 3.6 min, was the best OH condition for obtaining a BBP effective against SE.
本研究旨在从动物双歧杆菌亚种中获得副益生菌。乳酸菌BB -12 (BB)对肠沙门氏菌(SE)具有最佳的抗菌活性。采用欧姆加热法(OH)在不同条件下获得BB (BBP)副益生菌,并研究其对沙门氏菌生长、生物膜形成和粘附Caco-2细胞等关键特性的影响。此外,利用1H NMR谱进行代谢组学分析,以鉴定与SE抗菌活性有关的代谢物。通过优化方法,发现线性模型在拟合模型中对BBP抗菌活性(AMA)的预测潜力最高。二次元模型对抗菌膜活性(ABA)和抗粘附活性(AAA)的预测效果较好。对BBP的AMA、ABA和AAA影响最大的变量分别是电场(EF)、OH时间和OH温度。BB的主要代谢物为甘油(37.6 μmol/g)、乙醇(22.6 μmol/g)和乳酸(9.8 μmol/g), BBP的主要代谢物为甘油(47.8 μmol/g)、乙酸(34.0 μmol/g)和乳酸(24.6 μmol/g)。在最佳OH工艺条件下获得的BBP的抗se特性均高于未处理样品BB,这可能与检测到的代谢物水平较高有关。OH工艺条件为:EF为8.7 V/cm, OH温度为88℃,细胞浓度为8.7 log CFU/mL, OH时间为3.6 min,可获得有效抗SE的BBP。
{"title":"Antimicrobial properties of Bifidobacterium animalis subsp. lactis Bb-12 paraprobiotic obtained using ohmic heating against Salmonella enterica: A metabolomic approach","authors":"Mahmoud Yolmeh ,&nbsp;Mauricio Luis Sforça ,&nbsp;Anderson S. Sant'Ana","doi":"10.1016/j.ijfoodmicro.2024.111016","DOIUrl":"10.1016/j.ijfoodmicro.2024.111016","url":null,"abstract":"<div><div>This study aimed to obtain paraprobiotics from <em>Bifidobacterium animalis</em> subsp. <em>lactis</em> Bb-12 (BB) presenting optimized antimicrobial activity against <em>Salmonella enterica</em> (<em>SE</em>). The paraprobiotics of BB (BBP) were obtained using ohmic heating (OH) under different conditions, and their effects on critical features of <em>Salmonella</em>, such as bacterial growth, biofilm formation, and adherence to Caco-2 cells, were studied. In addition, a metabolomic analysis was performed using <sup>1</sup>H NMR spectroscopy to identify the metabolites involved in antimicrobial activity against <em>SE</em>. Through an optimization approach, it was found that the linear model demonstrated the highest predictive potential for the antimicrobial activity (AMA) of BBP among the fitted models. In contrast, the quadratic model was more predictive for the antibiofilm activity (ABA) and anti-adherence activity (AAA). The highest effects on the AMA, ABA, and AAA of BBP were associated with the variables electric field (EF), OH time, and OH temperature, respectively. Glycerol (37.6 μmol/g), ethanol (22.6 μmol/g), and lactate (9.8 μmol/g) were measured as the main metabolites in BB, while glycerol (47.8 μmol/g), acetate (34.0 μmol/g), and lactate (24.6 μmol/g) were the main metabolites in BBP. All the anti-<em>SE</em> characteristics of BBP obtained under the optimal conditions of the OH process were higher than those of BB (the untreated sample), which could be related to the higher levels of detected metabolites. The OH process, EF of 8.7 V/cm, OH temperature of 88 °C, cell concentration of 8.7 log CFU/mL, and OH time of 3.6 min, was the best OH condition for obtaining a BBP effective against <em>SE</em>.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"429 ","pages":"Article 111016"},"PeriodicalIF":5.0,"publicationDate":"2025-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142823941","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Transfer, survival and photoinactivation of Salmonella enterica on fresh produce and gloves
IF 5 1区 农林科学 Q1 FOOD SCIENCE & TECHNOLOGY Pub Date : 2025-01-31 DOI: 10.1016/j.ijfoodmicro.2025.111089
Ruthchelly Tavares da Silva , Geany Targino de Souza Pedrosa , Alyson José dos Santos Franco , Maria Mayara de Souza Grilo , Fernando Azevedo de Lucena , Carlos Eduardo Barão , Jiin Jung , Donald W. Schaffner , Marciane Magnani
This study quantified the transfer of Salmonella between fruit (tomato and cucumber) and gloves (High-density polyethylene-HDPE, Vinyl-VY) after different contact time (2, 5, 10 and 30 s). The survival of Salmonella in discarded gloves and the photodynamic inactivation (PDI; curcumin 7.5 μM; 16.1, 20.2 and 24.2 J/cm2) of the pathogen were also evaluated. Scanning electronic micrographs showed the cell morphology of Salmonella on discarded HDPE and VY gloves. The highest transfer (p > 0.05) of Salmonella occurred after 30 s (4.0 %; −1.4 log %) from tomato to HDPE. Salmonella on contaminated gloves survived for up to 9 days (2.1–1.5 log CFU/sample). PDI reduced (p > 0.05) Salmonella counts ∼3.0 and 2.0 log CFU/sample after 12 min on tomato and cucumber, respectively. These results contribute important information about transfer and survival of Salmonella on gloves and fruit. The obtained data can be used to support the development of risk assessment models and measures to mitigate the risks of Salmonella contamination in fresh- produce.
{"title":"Transfer, survival and photoinactivation of Salmonella enterica on fresh produce and gloves","authors":"Ruthchelly Tavares da Silva ,&nbsp;Geany Targino de Souza Pedrosa ,&nbsp;Alyson José dos Santos Franco ,&nbsp;Maria Mayara de Souza Grilo ,&nbsp;Fernando Azevedo de Lucena ,&nbsp;Carlos Eduardo Barão ,&nbsp;Jiin Jung ,&nbsp;Donald W. Schaffner ,&nbsp;Marciane Magnani","doi":"10.1016/j.ijfoodmicro.2025.111089","DOIUrl":"10.1016/j.ijfoodmicro.2025.111089","url":null,"abstract":"<div><div>This study quantified the transfer of <em>Salmonella</em> between fruit (tomato and cucumber) and gloves (High-density polyethylene-HDPE, Vinyl-VY) after different contact time (2, 5, 10 and 30 s). The survival of <em>Salmonella</em> in discarded gloves and the photodynamic inactivation (PDI; curcumin 7.5 μM; 16.1, 20.2 and 24.2 J/cm<sup>2</sup>) of the pathogen were also evaluated. Scanning electronic micrographs showed the cell morphology of <em>Salmonella</em> on discarded HDPE and VY gloves. The highest transfer (<em>p</em> &gt; 0.05) of <em>Salmonella</em> occurred after 30 s (4.0 %; −1.4 log %) from tomato to HDPE. <em>Salmonella</em> on contaminated gloves survived for up to 9 days (2.1–1.5 log CFU/sample). PDI reduced (<em>p</em> &gt; 0.05) <em>Salmonella</em> counts ∼3.0 and 2.0 log CFU/sample after 12 min on tomato and cucumber, respectively. These results contribute important information about transfer and survival of <em>Salmonella</em> on gloves and fruit. The obtained data can be used to support the development of risk assessment models and measures to mitigate the risks of <em>Salmonella</em> contamination in fresh- produce.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"431 ","pages":"Article 111089"},"PeriodicalIF":5.0,"publicationDate":"2025-01-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143149302","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Monitoring antimicrobial resistance in Salmonella enterica serovar Infantis isolates of poultry, livestock, and humans across the United States, 2013–2020
IF 5 1区 农林科学 Q1 FOOD SCIENCE & TECHNOLOGY Pub Date : 2025-01-30 DOI: 10.1016/j.ijfoodmicro.2025.111090
Mohammad Nasim Sohail , Csaba Varga
Salmonella enterica serovar Infantis (S. Infantis) is an emerging zoonotic foodborne pathogen. This study used publicly available data on S. Infantis from the National Antimicrobial Resistance Monitoring System (NARMS) to evaluate the prevalence and antimicrobial resistance (AMR) of S. Infantis across the United States of America between 2013 and 2020. The highest prevalence of S. Infantis was identified in chickens (3027 isolated from 18,078 samples; 16.75 %), swine (431/5600; 6.09 %), turkeys (161/4019; 4.01 %), humans (737/18,774; 3.93 %), and cattle (134/8010; 1.67 %). Over the study period, a significant increase in S. Infantis isolates of chickens and turkeys, a moderate in cattle, a low in humans, and no increase in swine was observed. High resistance to tetracycline, nalidixic acid, and sulfisoxazole and low resistance to cefoxitin and amoxicillin-clavulanic acid were detected among livestock, poultry, and human isolates. Reduced susceptibility to ciprofloxacin was observed in 52.46 % of chicken isolates, 62.11 % of turkey, and 18.59 % of human isolates. Multi-drug resistance (MDR; resistant to at least one agent in ≥3 antimicrobial classes) was detected in 93 % of turkeys, 83 % of chickens, 22 % of humans, 16 % of cattle, and 6 % of swine isolates. This study identified differences in the prevalence and AMR of S. Infantis across the food chain, highlighting the importance of a focused One Health approach to mitigate the emergence of AMR and to reduce the health burden of infections with drug-resistant isolates.
{"title":"Monitoring antimicrobial resistance in Salmonella enterica serovar Infantis isolates of poultry, livestock, and humans across the United States, 2013–2020","authors":"Mohammad Nasim Sohail ,&nbsp;Csaba Varga","doi":"10.1016/j.ijfoodmicro.2025.111090","DOIUrl":"10.1016/j.ijfoodmicro.2025.111090","url":null,"abstract":"<div><div><em>Salmonella enterica</em> serovar Infantis (<em>S.</em> Infantis) is an emerging zoonotic foodborne pathogen. This study used publicly available data on <em>S.</em> Infantis from the National Antimicrobial Resistance Monitoring System (NARMS) to evaluate the prevalence and antimicrobial resistance (AMR) of <em>S.</em> Infantis across the United States of America between 2013 and 2020. The highest prevalence of <em>S.</em> Infantis was identified in chickens (3027 isolated from 18,078 samples; 16.75 %), swine (431/5600; 6.09 %), turkeys (161/4019; 4.01 %), humans (737/18,774; 3.93 %), and cattle (134/8010; 1.67 %). Over the study period, a significant increase in <em>S.</em> Infantis isolates of chickens and turkeys, a moderate in cattle, a low in humans, and no increase in swine was observed. High resistance to tetracycline, nalidixic acid, and sulfisoxazole and low resistance to cefoxitin and amoxicillin-clavulanic acid were detected among livestock, poultry, and human isolates. Reduced susceptibility to ciprofloxacin was observed in 52.46 % of chicken isolates, 62.11 % of turkey, and 18.59 % of human isolates. Multi-drug resistance (MDR; resistant to at least one agent in ≥3 antimicrobial classes) was detected in 93 % of turkeys, 83 % of chickens, 22 % of humans, 16 % of cattle, and 6 % of swine isolates. This study identified differences in the prevalence and AMR of <em>S.</em> Infantis across the food chain, highlighting the importance of a focused One Health approach to mitigate the emergence of AMR and to reduce the health burden of infections with drug-resistant isolates.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"432 ","pages":"Article 111090"},"PeriodicalIF":5.0,"publicationDate":"2025-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143336447","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Regulatory roles of the AraC family transcription factor yeaM in the virulence and biofilm formation of Salmonella Typhimurium
IF 5 1区 农林科学 Q1 FOOD SCIENCE & TECHNOLOGY Pub Date : 2025-01-29 DOI: 10.1016/j.ijfoodmicro.2025.111088
Zhongmei Ma , Jifu Ma , Jie Li , Zhanpeng Wang , Lixiang Wei , Ahmad Ali , Yufei Zuo , Xuepeng Cai , Qingling Meng , Jun Qiao
Salmonella Typhimurium (S. typhimurium) is a significant zoonotic pathogen responsible for gastroenteritis and severe systemic infections in various hosts. The AraC family transcription factors are key gene expression regulators in prokaryotes, essential for bacterial adaptation to the environment and virulence. Despite their importance, the role of yeaM, a member of this family in S. typhimurium, remains unexplored.
To elucidate yeaM regulatory function in virulence and biofilm formation, we engineered mutant and complementary strains of the yeaM gene using homologous recombination. We assessed their capabilities in biofilm formation under different conditions, macrophage adherence and invasion, and virulence in mice. Additionally, we identified potential target genes regulated by yeaM through transcriptome sequencing and confirmed these findings using an electrophoretic mobility shift assay (EMSA) and a dual-luciferase reporter assay.
Our results demonstrate that, compared to the parental strain SL1344 and the complemented strain CΔyeaM, the ΔyeaM strain exhibited significantly enhanced biofilm formation, increased invasion of mouse intestinal epithelial cells, enhanced intracellular proliferation within macrophages, and elevated induction of macrophage apoptosis. Furthermore, the ΔyeaM deletion strain displayed significantly increased virulence in mice and enhanced proliferation in milk. Transcriptome analysis revealed that S. typhimurium pathogenicity island 4 (SPI4) genes (siiA, siiB, siiC, siiD, siiF, and siiE) were significantly upregulated following the deletion of the yeaM gene. EMSA and dual-luciferase reporter assays further showed that the yeaM protein can bind to the promoter of the siiA gene and suppress its expression, thereby modulating the biofilm formation and virulence of S. typhimurium.
{"title":"Regulatory roles of the AraC family transcription factor yeaM in the virulence and biofilm formation of Salmonella Typhimurium","authors":"Zhongmei Ma ,&nbsp;Jifu Ma ,&nbsp;Jie Li ,&nbsp;Zhanpeng Wang ,&nbsp;Lixiang Wei ,&nbsp;Ahmad Ali ,&nbsp;Yufei Zuo ,&nbsp;Xuepeng Cai ,&nbsp;Qingling Meng ,&nbsp;Jun Qiao","doi":"10.1016/j.ijfoodmicro.2025.111088","DOIUrl":"10.1016/j.ijfoodmicro.2025.111088","url":null,"abstract":"<div><div><em>Salmonella Typhimurium</em> (<em>S. typhimurium</em>) is a significant zoonotic pathogen responsible for gastroenteritis and severe systemic infections in various hosts. The AraC family transcription factors are key gene expression regulators in prokaryotes, essential for bacterial adaptation to the environment and virulence. Despite their importance, the role of <em>yeaM</em>, a member of this family in <em>S. typhimurium</em>, remains unexplored.</div><div>To elucidate <em>yeaM</em> regulatory function in virulence and biofilm formation, we engineered mutant and complementary strains of the <em>yeaM</em> gene using homologous recombination. We assessed their capabilities in biofilm formation under different conditions, macrophage adherence and invasion, and virulence in mice. Additionally, we identified potential target genes regulated by <em>yeaM</em> through transcriptome sequencing and confirmed these findings using an electrophoretic mobility shift assay (EMSA) and a dual-luciferase reporter assay.</div><div>Our results demonstrate that, compared to the parental strain SL1344 and the complemented strain C<em>ΔyeaM</em>, the <em>ΔyeaM</em> strain exhibited significantly enhanced biofilm formation, increased invasion of mouse intestinal epithelial cells, enhanced intracellular proliferation within macrophages, and elevated induction of macrophage apoptosis. Furthermore, the <em>ΔyeaM</em> deletion strain displayed significantly increased virulence in mice and enhanced proliferation in milk. Transcriptome analysis revealed that <em>S. typhimurium</em> pathogenicity island 4 (SPI4) genes (<em>siiA</em>, <em>siiB</em>, <em>siiC</em>, <em>siiD</em>, <em>siiF</em>, and <em>siiE</em>) were significantly upregulated following the deletion of the <em>yeaM</em> gene. EMSA and dual-luciferase reporter assays further showed that the yeaM protein can bind to the promoter of the <em>siiA</em> gene and suppress its expression, thereby modulating the biofilm formation and virulence of <em>S. typhimurium.</em></div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"431 ","pages":"Article 111088"},"PeriodicalIF":5.0,"publicationDate":"2025-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143079863","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cost-effectiveness of interventions toward improving microbial food safety of chicken meat along supply chains in Burkina Faso and Ethiopia
IF 5 1区 农林科学 Q1 FOOD SCIENCE & TECHNOLOGY Pub Date : 2025-01-28 DOI: 10.1016/j.ijfoodmicro.2025.111086
James Noah Ssemanda , Heidy M.W. den Besten , Michel M. Dione , Kebede Amenu , Theodore J.D. Knight-Jones , Marcel H. Zwietering , Coen P.A. van Wagenberg
Estimates for the cost-effectiveness of food safety interventions are needed to direct food safety management decisions. In this study, we estimated the cost-effectiveness of food safety interventions to control Campylobacter spp. and Salmonella spp. along the chicken meat supply chain in Burkina Faso and Ethiopia. Using Monte-Carlo simulation models, we estimated the cost-effectiveness ratio (CER) of these interventions from the annual costs of an intervention (in United States Dollar, ($)) divided by their respective public health benefits (avoided disability-adjusted life years (DALY)) for each pathogen separately and for the two pathogens combined. The lower the CER of an intervention the better. In Burkina Faso, out of 16 candidate interventions, the three interventions with the lowest CER were improved handwashing in chicken restaurants (Campylobacter spp. 387 $/avoided DALY (95 % Prediction interval: 69–1468); Salmonella spp. 7801 (1067–33,492)), using designated kitchen utensils at restaurants (549 (107–2026); 4515 (671–18,957)), and avoiding cross contamination between live birds at market (768 (187–2620); 5127 (933–20,423)). In Ethiopia, out of 15, the interventions that came first were improved transport conditions of live birds (296 (79–996); 534 (150–1770)), adding plant extracts to feed or water at farms (387 (69–1532); 581 (108–2256)), and adding organic acids to feed or water at farms (454 (69–1947); 1226 (195–5178)). When all costs were attributed to chicken meat, the household interventions in Ethiopia had substantially higher CER than interventions in other supply chain stages, because of the low number of chickens prepared and consumed at home in a year. When only part of the costs was attributed, the CER of these household interventions were reduced by over 90 % ranking them as the most cost-effective interventions in the supply chain. When considering public health benefits of both Campylobacter spp. and Salmonella spp. in Burkina Faso, the CERs were 11 to 64 % lower compared to the CER when only considering Campylobacter spp. and 59 to 96 % lower if only looking at Salmonella spp., depending on the intervention. In Ethiopia, this was 25 to 80 % for Campylobacter spp. and 36 to 87 % for Salmonella spp., respectively. Thus, attribution of intervention costs to the food product of interest and inclusion of multiple pathogens can have a substantial impact on the estimated cost-effectiveness of control measures.
Our developed framework and models can be used to estimate the CER of food safety interventions, guide implementation of food safety measures in chicken meat supply chains of not only in Burkina Faso and Ethiopia but also in other LMICs with similar conditions.
{"title":"Cost-effectiveness of interventions toward improving microbial food safety of chicken meat along supply chains in Burkina Faso and Ethiopia","authors":"James Noah Ssemanda ,&nbsp;Heidy M.W. den Besten ,&nbsp;Michel M. Dione ,&nbsp;Kebede Amenu ,&nbsp;Theodore J.D. Knight-Jones ,&nbsp;Marcel H. Zwietering ,&nbsp;Coen P.A. van Wagenberg","doi":"10.1016/j.ijfoodmicro.2025.111086","DOIUrl":"10.1016/j.ijfoodmicro.2025.111086","url":null,"abstract":"<div><div>Estimates for the cost-effectiveness of food safety interventions are needed to direct food safety management decisions. In this study, we estimated the cost-effectiveness of food safety interventions to control <em>Campylobacter</em> spp. and <em>Salmonella</em> spp. along the chicken meat supply chain in Burkina Faso and Ethiopia. Using Monte-Carlo simulation models, we estimated the cost-effectiveness ratio (CER) of these interventions from the annual costs of an intervention (in United States Dollar, ($)) divided by their respective public health benefits (avoided disability-adjusted life years (DALY)) for each pathogen separately and for the two pathogens combined. The lower the CER of an intervention the better. In Burkina Faso, out of 16 candidate interventions, the three interventions with the lowest CER were improved handwashing in chicken restaurants (<em>Campylobacter</em> spp. 387 $/avoided DALY (95 % Prediction interval: 69–1468); <em>Salmonella</em> spp. 7801 (1067–33,492)), using designated kitchen utensils at restaurants (549 (107–2026); 4515 (671–18,957)), and avoiding cross contamination between live birds at market (768 (187–2620); 5127 (933–20,423)). In Ethiopia, out of 15, the interventions that came first were improved transport conditions of live birds (296 (79–996); 534 (150–1770)), adding plant extracts to feed or water at farms (387 (69–1532); 581 (108–2256)), and adding organic acids to feed or water at farms (454 (69–1947); 1226 (195–5178)). When all costs were attributed to chicken meat, the household interventions in Ethiopia had substantially higher CER than interventions in other supply chain stages, because of the low number of chickens prepared and consumed at home in a year. When only part of the costs was attributed, the CER of these household interventions were reduced by over 90 % ranking them as the most cost-effective interventions in the supply chain. When considering public health benefits of both <em>Campylobacter</em> spp. and <em>Salmonella</em> spp. in Burkina Faso, the CERs were 11 to 64 % lower compared to the CER when only considering <em>Campylobacter</em> spp. and 59 to 96 % lower if only looking at <em>Salmonella</em> spp., depending on the intervention. In Ethiopia, this was 25 to 80 % for <em>Campylobacter</em> spp. and 36 to 87 % for <em>Salmonella</em> spp., respectively. Thus, attribution of intervention costs to the food product of interest and inclusion of multiple pathogens can have a substantial impact on the estimated cost-effectiveness of control measures.</div><div>Our developed framework and models can be used to estimate the CER of food safety interventions, guide implementation of food safety measures in chicken meat supply chains of not only in Burkina Faso and Ethiopia but also in other LMICs with similar conditions.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"431 ","pages":"Article 111086"},"PeriodicalIF":5.0,"publicationDate":"2025-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143074465","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synergistic inactivation effect of ultrasound and nano-emulsified basil essential oil on the metabolic responses of Salmonella on sprouts
IF 5 1区 农林科学 Q1 FOOD SCIENCE & TECHNOLOGY Pub Date : 2025-01-27 DOI: 10.1016/j.ijfoodmicro.2025.111082
Zifei Liu , Peiwen Sun , Xichen He , Dingsong Lin , Lijing Ke , Chao Shi , Hongshun Yang , Lingchi Deng , Zejia Lin , Lin Chen
This study investigated the effectiveness and mechanisms of ultrasound (US), nano-emulsified basil essential oil (NBEO), and their combination (NBEO_US) in inactivating Salmonella enterica cells inoculated on pea sprouts. The results demonstrated that the combined treatment was more effective than individual treatments in inactivating the target. This led to a decrease of 4.4 to 5.0 log CFU/g. Transmission electron microscopy showed that NBEO_US leads to the disruption of the bacteria morphology. Additionally, the leakage of cell constituents (proteins and nucleotide) demonstrated that NBEO_US disrupted the structural integrity of S. enterica cells. In addition, the metabolomics analysis using 1H NMR showed that NBEO_US had a detrimental effect on energy and amino acid metabolism in bacterial cells, specifically affecting glycolysis and amino acid production. Also, NBEO_US affected the Embden-Meyerhof-Parnas pathway in S. enterica cells by decreasing the activity of hexokinase, phosphofructokinase, and pyruvate kinase. Finally, the application of NBEO_US resulted in a substantial (P < 0.05) increase in the hardness of the treated pea sprouts while simultaneously decreasing their lightness. The present investigation illustrated the synergistic antibacterial mechanism of NBEO_US against S. enterica strains using sprouts as a food model. By understanding the microbiological changes in metabolic pathways induced by the combined treatment, sanitization strategies can be optimized to specifically target critical vulnerabilities, thereby ensuring safer and more efficient production of fresh produce.
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引用次数: 0
Improvement of physicochemical characteristics, bioactivity, flavor and metabolic profiles of mango juice fermented by Limosilactobacillus reuteri
IF 5 1区 农林科学 Q1 FOOD SCIENCE & TECHNOLOGY Pub Date : 2025-01-25 DOI: 10.1016/j.ijfoodmicro.2025.111087
Weiling Guo , Haoyu Zheng , Siyu He , Xucong Lv , Peng Liang , Feifei Shi
The aim of this study was to explore the alterations in physicochemical characteristics, bioactivity, flavor and metabolic profiles of mango juice fermented by Limosilactobacillus reuteri FJG2526 (L. reuteri FJG2526). The results exhibited that L. reuteri FJG2526 had strong adaptability in mango juice, and reduced the total sugar, polyphenolics and flavonoids content of mango juice. L. reuteri FJG2526 fermentation ameliorated the flavor profiles of mango juice, particularly promoted the production of acids, alcohols, and esters. Moreover, 107 metabolites in the mango juice were drastically altered after 48 h L. reuteri FJG2526 fermentation by metabolomic analysis, including 73 remarkably upregulated metabolites and 34 remarkably downregulated metabolites, primarily involving amino acid metabolism. In addition, L. reuteri FJG2526 fermentation also enhanced the ability to scavenge DPPH and OH free radicals of mango juice, and inhibited lipase and α-glucosidase activities. This study offers new insights into the mango juice fermentation and will contribute to the application of L. reuteri in functional juices.
{"title":"Improvement of physicochemical characteristics, bioactivity, flavor and metabolic profiles of mango juice fermented by Limosilactobacillus reuteri","authors":"Weiling Guo ,&nbsp;Haoyu Zheng ,&nbsp;Siyu He ,&nbsp;Xucong Lv ,&nbsp;Peng Liang ,&nbsp;Feifei Shi","doi":"10.1016/j.ijfoodmicro.2025.111087","DOIUrl":"10.1016/j.ijfoodmicro.2025.111087","url":null,"abstract":"<div><div>The aim of this study was to explore the alterations in physicochemical characteristics, bioactivity, flavor and metabolic profiles of mango juice fermented by <em>Limosilactobacillus reuteri</em> FJG2526 (<em>L. reuteri</em> FJG2526). The results exhibited that L. <em>reuteri</em> FJG2526 had strong adaptability in mango juice, and reduced the total sugar, polyphenolics and flavonoids content of mango juice. <em>L. reuteri</em> FJG2526 fermentation ameliorated the flavor profiles of mango juice, particularly promoted the production of acids, alcohols, and esters. Moreover, 107 metabolites in the mango juice were drastically altered after 48 h <em>L. reuteri</em> FJG2526 fermentation by metabolomic analysis, including 73 remarkably upregulated metabolites and 34 remarkably downregulated metabolites, primarily involving amino acid metabolism. In addition, <em>L. reuteri</em> FJG2526 fermentation also enhanced the ability to scavenge DPPH and OH free radicals of mango juice, and inhibited lipase and α-glucosidase activities. This study offers new insights into the mango juice fermentation and will contribute to the application of L. <em>reuteri</em> in functional juices.</div></div>","PeriodicalId":14095,"journal":{"name":"International journal of food microbiology","volume":"431 ","pages":"Article 111087"},"PeriodicalIF":5.0,"publicationDate":"2025-01-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143074473","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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International journal of food microbiology
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