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Synthesis of a series of novel 2,5-disubstituted-1,3,4-oxadiazole derivatives as potential antioxidant and antibacterial agents. 一系列新的2,5-二取代-1,3,4-恶二唑衍生物的合成,作为潜在的抗氧化剂和抗菌剂。
Pub Date : 2016-07-07 eCollection Date: 2016-07-01 DOI: 10.1007/s12154-016-0153-9
M Aruna Sindhe, Yadav D Bodke, R Kenchappa, Sandeep Telkar, A Chandrashekar

A series of novel 2,5-disubstituted-1,3,4-oxadiazole derivatives were synthesized and screened for their antimicrobial and antioxidant activities. The assay indicated that compounds 3c, 3d, and 3i exhibited comparable antibacterial and antioxidant activity with first-line drugs. The structure activity relationship and molecular docking study of the synthesized compounds are also reported.

合成了一系列新的2,5-二取代-1,3,4-恶二唑衍生物,并对其抗菌和抗氧化活性进行了筛选。实验结果表明,化合物3c、3d和3i具有与一线药物相当的抗菌和抗氧化活性。并报道了所合成化合物的构效关系和分子对接研究。
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引用次数: 18
JOCB Bulletin. JOCB公告。
Pub Date : 2016-07-02 eCollection Date: 2016-07-01 DOI: 10.1007/s12154-016-0151-y
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引用次数: 0
Homology modeling and virtual screening studies of FGF-7 protein-a structure-based approach to design new molecules against tumor angiogenesis. FGF-7蛋白同源性建模和虚拟筛选研究——一种基于结构的抗肿瘤血管生成新分子设计方法。
Pub Date : 2016-06-18 eCollection Date: 2016-07-01 DOI: 10.1007/s12154-016-0152-x
Rajender Vadija, Kiran Kumar Mustyala, Navaneetha Nambigari, Ramasree Dulapalli, Rama Krishna Dumpati, Vishwanath Ramatenki, Santhi Prada Vellanki, Uma Vuruputuri

Keratinocyte growth factor (KGF) protein is a member of the fibroblast growth factor (FGF) family, which is also known as FGF-7. The FGF-7 plays an important role in tumor angiogenesis. In the present work, FGF-7 is treated as a potential therapeutic target to prevent angiogenesis in cancerous tissue. Computational techniques are applied to evaluate and validate the 3D structure of FGF-7 protein. The active site region of the FGF-7 protein is identified based on hydrophobicity calculations using CASTp and Q-site Finder active site prediction tools. The protein-protein docking study of FGF-7 with its natural receptor FGFR2b is carried out to confirm the active site region in FGF-7. The amino acid residues Asp34, Arg67, Glu116, and Thr194 in FGF-7 interact with the receptor protein (FGFR2b). A grid is generated at the active site region of FGF-7 using Glide module of Schrödinger suite. Subsequently, a virtual screening study is carried out at the active site using small molecular structural databases to identify the ligand molecules. The binding interactions of the ligand molecules, with piperazine moiety as a pharmacophore, are observed at Arg67 and Glu149 residues of the FGF-7 protein. The identified ligand molecules against the FGF-7 protein show permissible pharmacokinetic properties (ADME). The ligand molecules with good docking scores and satisfactory pharmacokinetic properties are prioritized and identified as novel ligands for the FGF-7 protein in cancer therapy.

角质细胞生长因子(KGF)蛋白是成纤维细胞生长因子(FGF)家族的一员,也被称为FGF-7。FGF-7在肿瘤血管生成中起重要作用。在目前的工作中,FGF-7被视为防止癌组织血管生成的潜在治疗靶点。计算技术应用于评估和验证FGF-7蛋白的三维结构。FGF-7蛋白的活性位点区域是基于使用CASTp和Q-site Finder活性位点预测工具的疏水性计算来确定的。通过FGF-7与其天然受体FGFR2b的蛋白-蛋白对接研究,确认FGF-7中的活性位点区域。FGF-7中的氨基酸残基Asp34、Arg67、Glu116和Thr194与受体蛋白(FGFR2b)相互作用。利用Schrödinger suite的Glide模块在FGF-7活性部位区域生成网格。随后,利用小分子结构数据库在活性位点进行虚拟筛选研究,以识别配体分子。在FGF-7蛋白的Arg67和Glu149残基上观察到配体分子的结合相互作用,哌嗪部分作为药效团。所鉴定的针对FGF-7蛋白的配体分子显示出允许的药代动力学特性(ADME)。具有良好对接评分和令人满意的药代动力学特性的配体分子被优先考虑并确定为FGF-7蛋白在癌症治疗中的新型配体。
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引用次数: 13
JOCB Bulletin. JOCB公告。
Pub Date : 2016-04-01 DOI: 10.1007/s12154-016-0150-z
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引用次数: 0
An initial top-down proteomic analysis of the standard cuprizone mouse model of multiple sclerosis 对多发性硬化症标准铜酮小鼠模型进行初步自上而下的蛋白质组学分析
Pub Date : 2016-01-01 DOI: 10.1007/s12154-015-0138-0
Melissa A. Partridge, Sumana Gopinath, S. Myers, J. Coorssen
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引用次数: 19
Theoretical study of electron transfer process between fullerenes and neurotransmitters; acetylcholine, dopamine, serotonin and epinephrine in nanostructures [neurotransmitters].Cn complexes 富勒烯与神经递质之间电子传递过程的理论研究纳米结构[神经递质]中的乙酰胆碱、多巴胺、血清素和肾上腺素。Cn复合物
Pub Date : 2016-01-01 DOI: 10.1007/s12154-015-0139-z
A. Taherpour, M. Rizehbandi, Fatemeh Jahanian, Ehsan Naghibi, Nosratollah Mahdizadeh
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引用次数: 4
Synthesis, antibacterial studies, and molecular modeling studies of 3,4-dihydropyrimidinone compounds 3,4-二氢嘧啶类化合物的合成、抗菌研究及分子模拟研究
Pub Date : 2016-01-01 DOI: 10.1007/s12154-015-0142-4
V. Ramachandran, K. Arumugasamy, S. Singh, N. Edayadulla, P. Ramesh, S. Kamaraj
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引用次数: 23
JOCB Bulletin
Pub Date : 2016-01-01 DOI: 10.1007/s12154-015-0149-x
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引用次数: 0
Combination of siRNA-directed gene silencing with epigallocatechin-3-gallate (EGCG) reverses drug resistance in human breast cancer cells sirna定向基因沉默与表没食子儿茶素-3-没食子酸酯(EGCG)联合可逆转人乳腺癌细胞的耐药性
Pub Date : 2016-01-01 DOI: 10.1007/s12154-015-0144-2
M. Esmaeili
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引用次数: 32
Alternatives to the ‘water oxidation pathway’ of biological ozone formation 替代生物臭氧形成的“水氧化途径”
Pub Date : 2016-01-01 DOI: 10.1007/s12154-015-0140-6
A. Onyango
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引用次数: 9
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