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Serum Pyroptosis-Related Cytokines as Biomarkers for Diagnostic Assessment and Risk Stratification of Ocular Graft-versus-Host Disease: A Case-Control Study. 血清焦热相关细胞因子作为眼部移植物抗宿主病诊断评估和风险分层的生物标志物:一项病例对照研究
IF 4.1 2区 医学 Q2 IMMUNOLOGY Pub Date : 2025-12-19 eCollection Date: 2025-01-01 DOI: 10.2147/JIR.S552170
Jing Lou, Yue Xu, Xinyu Zhuang, Ye Zhao, Hui Pan, Yingjie Chen, Xiaofeng Zhang, Peirong Lu

Background: Ocular graft-versus-host disease (oGVHD) often presents with subtle and nonspecific symptoms following allogeneic hematopoietic stem cell transplantation (allo-HSCT). Current diagnostic methods primarily depend on subjective clinical evaluations with limited sensitivity. This study aimed to identify serum pyroptosis-related cytokines associated with oGVHD and to develop a cytokine-based diagnostic model.

Methods: In this prospective case-control study, 116 allo-HSCT recipients (61 with oGVHD and 55 without) and 47 healthy controls were enrolled. A sandwich antibody array was used to screen differentially expressed proteins in a pilot cohort (n = 4 per group), followed by pathway enrichment analysis. Ocular surface parameters and serum levels of NLRP3, TLR4, CCL2, IL-18, IL-6, and TNF-α were measured. Linear correlation, logistic regression, receiver operating characteristic (ROC) analyses, and internal bootstrap validation were performed to evaluate diagnostic performance. A cytokine-based risk score model was established.

Results: Thirty-four upregulated proteins were enriched in immune and inflammatory pathways. Patients with oGVHD exhibited severe dry eye features and significantly higher serum levels of NLRP3, TLR4, CCL2, IL-18, and IL-6 (all p < 0.001), which inversely correlated with ocular surface parameters. A logistic model combining these five cytokines achieved excellent diagnostic accuracy (AUC = 0.960). Internal 10-fold cross-validation with 1,000 bootstrap iterations yielded a consistent mean AUC of 0.953, confirming model robustness. A simplified risk score stratified patients into low-, intermediate-, and high-risk categories with strong discriminatory power (p < 0.001).

Conclusion: A serum panel of NLRP3, TLR4, CCL2, IL-18, and IL-6 demonstrates high diagnostic accuracy and stability for oGVHD. As the diagnostic cutoffs were derived from the same dataset, potential overfitting cannot be excluded, and independent validation in larger multicenter cohorts is warranted.

背景:眼移植物抗宿主病(oGVHD)在同种异体造血干细胞移植(alloo - hsct)后通常表现为微妙和非特异性症状。目前的诊断方法主要依赖于主观的临床评估,敏感性有限。本研究旨在鉴定与oGVHD相关的血清热缩相关细胞因子,并建立基于细胞因子的诊断模型。方法:在这项前瞻性病例对照研究中,纳入了116名同种异体移植受体(61名oGVHD患者,55名无oGVHD患者)和47名健康对照者。使用三明治抗体阵列筛选先导队列(每组n = 4)中的差异表达蛋白,然后进行途径富集分析。测定眼表参数及血清NLRP3、TLR4、CCL2、IL-18、IL-6、TNF-α水平。采用线性相关、逻辑回归、受试者工作特征(ROC)分析和内部自举验证来评估诊断效果。建立基于细胞因子的风险评分模型。结果:34种上调蛋白在免疫和炎症通路中富集。oGVHD患者表现出严重的干眼特征,血清NLRP3、TLR4、CCL2、IL-18和IL-6水平显著升高(均p < 0.001),且与眼表参数呈负相关。结合这五种细胞因子的logistic模型获得了极好的诊断准确性(AUC = 0.960)。内部10倍交叉验证与1000次bootstrap迭代得到一致的平均AUC为0.953,证实了模型的稳健性。简化的风险评分将患者分为低、中、高风险三类,具有很强的区分力(p < 0.001)。结论:血清NLRP3、TLR4、CCL2、IL-18和IL-6对oGVHD的诊断具有较高的准确性和稳定性。由于诊断截止点来自相同的数据集,因此不能排除潜在的过拟合,并且需要在更大的多中心队列中进行独立验证。
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引用次数: 0
Synthetic 1,3,6-Tri-O-Galloyl-α-D-Glucose Mimics the Hippo Pathway Inhibitor VT107 in Suppressing Concanavalin A-Induced Inflammation in Human Glioblastoma Cells. 合成1,3,6-三- o -没食子酰-α- d -葡萄糖模拟Hippo通路抑制剂VT107抑制豆豆蛋白a诱导的人胶质母细胞瘤细胞炎症
IF 4.1 2区 医学 Q2 IMMUNOLOGY Pub Date : 2025-12-19 eCollection Date: 2025-01-01 DOI: 10.2147/JIR.S565721
Angélique Sabaoth Konan, Rosalie Zilinski, Mirolla Tadrous, Alain Zgheib, Roger Gaudreault, Borhane Annabi

Background: Glioblastoma (GBM) is the most aggressive primary tumor of the adult central nervous system, not only characterized by rapid proliferation and diffuse brain infiltration but also by a pronounced pro-inflammatory microenvironment that fuels tumor progression and therapeutic resistance. Current standard-of-care, surgical resection followed by radiotherapy and chemotherapy, offers limited survival benefit, partly due to inflammation-driven invasion and immune evasion. The Hippo signaling pathway, a critical regulator of cell proliferation, apoptosis, and tissue homeostasis, has recently been implicated in inflammatory signaling, making it an attractive therapeutic target.

Purpose: In this study, we investigated the anti-inflammatory and anti-invasive properties of 1,3,6-tri-O-galloyl-α-D-glucose (αTGG), the α-anomer of βTGG from Terminalia chebula, in comparison with pharmacological Hippo pathway inhibitors IAG933, VT107, and GNE7883.

Results: To mimic the inflammatory milieu associated with GBM, U87 cells were treated with Concanavalin A (ConA), which induced phosphorylation of ERK and IκB, key mediators of MAPK and NF-κB inflammatory pathways. Both αTGG and Hippo pathway inhibitors effectively suppressed these phosphorylation events, with VT107 showing the strongest effect. ConA exposure downregulated Hippo pathway downstream effectors (AXL, CTGF, CYR61) in a TEAD-dependent manner, highlighting the interplay between Hippo signaling and inflammatory transcriptional control. Importantly, αTGG and VT107 also significantly attenuated ConA-induced activation of proMMP-2 to MMP-2 and reduced the expression of multiple pro-inflammatory mediators, including COX2, CCL22, CCR2, CCR4, CXCL10, CXCL12, CXCR1, FASLG, IFNG, IL13, and IL17A.

Conclusion: These findings underscore the dual anti-inflammatory and anti-invasive actions of αTGG, positioning it as a promising candidate for targeting inflammation-driven GBM progression through modulation of Hippo pathway activity.

背景:胶质母细胞瘤(GBM)是成人中枢神经系统最具侵袭性的原发性肿瘤,不仅具有快速增殖和弥漫性脑浸润的特点,而且具有明显的促炎微环境,促进肿瘤进展和治疗抵抗。目前的标准治疗,手术切除后放疗和化疗,提供有限的生存效益,部分原因是炎症驱动的入侵和免疫逃避。Hippo信号通路是细胞增殖、凋亡和组织稳态的关键调节因子,最近被认为与炎症信号传导有关,使其成为一个有吸引力的治疗靶点。目的:通过与Hippo通路药物抑制剂IAG933、VT107和GNE7883的比较,研究chebula中βTGG的α-异位体α- tgg(1,3,6-三- o -没食子酰-α- d -葡萄糖)的抗炎和抗侵袭作用。结果:为了模拟GBM相关的炎症环境,我们给U87细胞注射了ConA,诱导MAPK和NF-κB炎症通路的关键介质ERK和i -κB的磷酸化。αTGG和Hippo通路抑制剂均能有效抑制这些磷酸化事件,其中VT107的作用最强。ConA暴露以泰德依赖的方式下调Hippo通路下游效应物(AXL, CTGF, CYR61),突出了Hippo信号传导与炎症转录控制之间的相互作用。重要的是,αTGG和VT107还显著减弱了cona诱导的proMMP-2对MMP-2的激活,并降低了多种促炎介质的表达,包括COX2、CCL22、CCR2、CCR4、CXCL10、CXCL12、CXCR1、FASLG、IFNG、IL13和IL17A。结论:这些发现强调了αTGG的双重抗炎和抗侵袭作用,将其定位为通过调节Hippo通路活性靶向炎症驱动的GBM进展的有希望的候选物。
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引用次数: 0
Wnt3a Inhibits Inflammatory Responses and Improves Survival in Immortalised Schwann Cells. Wnt3a抑制永生化雪旺细胞的炎症反应并提高其存活率。
IF 4.1 2区 医学 Q2 IMMUNOLOGY Pub Date : 2025-12-18 eCollection Date: 2025-01-01 DOI: 10.2147/JIR.S549712
Jian Zheng, Yanting Zhang, Guoxin Nan

Background: Spinal cord injury (SCI) triggers a intense inflammatory response that hinders the success of cell transplantation therapies. Immortalised Schwann cells (iSCs) offer a renewable cell source, but their response to inflammation is poorly understood. Wnt3a regulates neural stem cells, but its role in modulating inflammatory responses in iSCs remains unclear.

Methods: Rat Schwann cells (SCs) were immortalised using SV40Tag. An inflammatory model was established by treating iSCs with LPS, in the presence or absence of Wnt3a protein. The inflammatory response, apoptosis, proliferation, and migration were assessed using quantitative PCR (qPCR), Western blotting, immunofluorescence, CCK-8 assay, TUNEL staining, flow cytometry, and scratch wound healing assay. An acute spinal cord injury model in rats was utilised for in vivo validation.

Results: This study shows that immortalized Schwann cells share some genotypic similarity with primary Schwann cells, but have a much faster proliferation rate than Schwann cells, which can be better used for neurological disease-related research. In addition, in the LPS-induced inflammatory environment, Wnt3a was able to inhibit the expression of IL-1β in immortalized Schwann cells, and enhance the expression of TGF-β by activating NF-κB. More importantly, Wnt3a inhibited the level of apoptosis in the inflammatory environment and promoted the proliferation and migration ability of cells, which also enhanced the function of immortalized Schwann cells.

Conclusion: Wnt3a modulates the inflammatory response in iSCs, primarily through NF-κB-mediated upregulation of TGF-β, and promotes iSC survival and function. The combination of iSCs and Wnt3a presents a promising strategy for improving cell transplantation therapy for SCI.

背景:脊髓损伤(SCI)引发强烈的炎症反应,阻碍细胞移植治疗的成功。永生化雪旺细胞(iSCs)提供了一种可再生的细胞来源,但它们对炎症的反应尚不清楚。Wnt3a调节神经干细胞,但其在iSCs中调节炎症反应的作用尚不清楚。方法:采用SV40Tag法永生化大鼠雪旺细胞。在Wnt3a蛋白存在或不存在的情况下,用LPS处理iSCs建立炎症模型。采用定量PCR (qPCR)、Western blotting、免疫荧光、CCK-8法、TUNEL染色、流式细胞术和抓伤愈合法评估炎症反应、细胞凋亡、增殖和迁移。采用大鼠急性脊髓损伤模型进行体内验证。结果:本研究表明永生化雪旺细胞与原代雪旺细胞具有一定的基因型相似性,但其增殖速度比原代雪旺细胞快得多,可更好地用于神经系统疾病相关的研究。此外,在lps诱导的炎症环境中,Wnt3a能够抑制永生化雪旺细胞中IL-1β的表达,并通过激活NF-κB来增强TGF-β的表达。更重要的是,Wnt3a抑制了炎症环境中的凋亡水平,促进了细胞的增殖和迁移能力,这也增强了永生化雪旺细胞的功能。结论:Wnt3a主要通过NF-κ b介导的TGF-β上调来调节iSC的炎症反应,促进iSC的存活和功能。iSCs和Wnt3a的联合为改善脊髓损伤的细胞移植治疗提供了一个有希望的策略。
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引用次数: 0
Downregulated MYL1 Emerges as a Promising Diagnostic Biomarker for Rheumatoid Arthritis. 下调MYL1成为类风湿关节炎有希望的诊断生物标志物
IF 4.1 2区 医学 Q2 IMMUNOLOGY Pub Date : 2025-12-18 eCollection Date: 2025-01-01 DOI: 10.2147/JIR.S551219
Chaoquan Yang, Zhiling Huang, Xifan Zheng, Haojun Tang, Wenpeng Qin, Yicheng Liang, Haidong Chen, Wenjun Hao, Dan Yi, William W Lu, Yan Chen

Purpose: Rheumatoid arthritis (RA) affects millions of people worldwide and causes chronic joint pain with incompletely understood pathogenesis and challenging management. Myosin light chain 1 (MYL1) a muscle regulatory protein, has an unknown role in RA pathogenesis.

Methods: We analyzed transcriptomic data from RA patients and healthy controls in the Gene Expression Omnibus (GEO). Using least absolute shrinkage and selection operator (LASSO) regression and random forest, we identified differentially expressed genes (DEGs). Diagnostic performance was assessed using receiver operating characteristic (ROC) curves and area under the curve (AUC). To explore potential mechanisms, we conducted functional enrichment and immune-infiltration analyses. We further validated MYL1 expression in a rat RA model using qRT-PCR and Western blotting.

Results: We found MYL1 significantly downregulated in RA with high diagnostic value (AUC > 0.8). Enrichment analyses revealed its involvement in muscle structure development, immune regulation, and calcium signaling pathways. CIBERSORT analysis indicated associations with immune cell infiltration, particularly regulatory T cells, activated natural killer (NK) cells, and M1 macrophages. The rat model confirmed reduced MYL1 expression at both mRNA (p < 0.001) and protein (p = 0.009) levels, consistent with human data.

Conclusion: MYL1 is consistently downregulated in RA and may serve as a potential diagnostic biomarker. The results indicate that MYL1 may be involved in the pathological process of RA through calcium signaling, muscle function, and immune cell regulation. However, further clinical and mechanistic studies are warranted.

目的:类风湿关节炎(RA)影响全球数百万人,引起慢性关节疼痛,其发病机制尚不完全清楚,治疗具有挑战性。肌球蛋白轻链1 (MYL1)是一种肌肉调节蛋白,在RA发病机制中的作用尚不清楚。方法:我们在基因表达综合(GEO)中分析了RA患者和健康对照的转录组数据。使用最小绝对收缩和选择算子(LASSO)回归和随机森林,我们鉴定了差异表达基因(DEGs)。采用受试者工作特征(ROC)曲线和曲线下面积(AUC)评估诊断效果。为了探索潜在的机制,我们进行了功能富集和免疫浸润分析。我们使用qRT-PCR和Western blotting进一步验证了MYL1在大鼠RA模型中的表达。结果:我们发现MYL1在RA中显著下调,具有较高的诊断价值(AUC >.8)。富集分析显示其参与肌肉结构发育、免疫调节和钙信号通路。CIBERSORT分析显示与免疫细胞浸润有关,特别是调节性T细胞、活化的自然杀伤(NK)细胞和M1巨噬细胞。大鼠模型证实MYL1在mRNA (p < 0.001)和蛋白(p = 0.009)水平上表达降低,与人类数据一致。结论:MYL1在RA中持续下调,可能作为潜在的诊断生物标志物。结果提示MYL1可能通过钙信号、肌肉功能和免疫细胞调节参与RA的病理过程。然而,进一步的临床和机理研究是必要的。
{"title":"Downregulated MYL1 Emerges as a Promising Diagnostic Biomarker for Rheumatoid Arthritis.","authors":"Chaoquan Yang, Zhiling Huang, Xifan Zheng, Haojun Tang, Wenpeng Qin, Yicheng Liang, Haidong Chen, Wenjun Hao, Dan Yi, William W Lu, Yan Chen","doi":"10.2147/JIR.S551219","DOIUrl":"10.2147/JIR.S551219","url":null,"abstract":"<p><strong>Purpose: </strong>Rheumatoid arthritis (RA) affects millions of people worldwide and causes chronic joint pain with incompletely understood pathogenesis and challenging management. Myosin light chain 1 (MYL1) a muscle regulatory protein, has an unknown role in RA pathogenesis.</p><p><strong>Methods: </strong>We analyzed transcriptomic data from RA patients and healthy controls in the Gene Expression Omnibus (GEO). Using least absolute shrinkage and selection operator (LASSO) regression and random forest, we identified differentially expressed genes (DEGs). Diagnostic performance was assessed using receiver operating characteristic (ROC) curves and area under the curve (AUC). To explore potential mechanisms, we conducted functional enrichment and immune-infiltration analyses. We further validated MYL1 expression in a rat RA model using qRT-PCR and Western blotting.</p><p><strong>Results: </strong>We found MYL1 significantly downregulated in RA with high diagnostic value (AUC > 0.8). Enrichment analyses revealed its involvement in muscle structure development, immune regulation, and calcium signaling pathways. CIBERSORT analysis indicated associations with immune cell infiltration, particularly regulatory T cells, activated natural killer (NK) cells, and M1 macrophages. The rat model confirmed reduced MYL1 expression at both mRNA (p < 0.001) and protein (p = 0.009) levels, consistent with human data.</p><p><strong>Conclusion: </strong>MYL1 is consistently downregulated in RA and may serve as a potential diagnostic biomarker. The results indicate that MYL1 may be involved in the pathological process of RA through calcium signaling, muscle function, and immune cell regulation. However, further clinical and mechanistic studies are warranted.</p>","PeriodicalId":16107,"journal":{"name":"Journal of Inflammation Research","volume":"18 ","pages":"17693-17714"},"PeriodicalIF":4.1,"publicationDate":"2025-12-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12720931/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145819657","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Age-Specific Cytokine Profiling in Children with Mycoplasma Pneumoniae Infections in Post-COVID-19 Era: A Retrospective Study. 后covid -19时代肺炎支原体感染儿童年龄特异性细胞因子分析:一项回顾性研究
IF 4.1 2区 医学 Q2 IMMUNOLOGY Pub Date : 2025-12-17 eCollection Date: 2025-01-01 DOI: 10.2147/JIR.S558898
Ying Sun, Lin Tong, Ming Lin, Zuowei Huang, Jing He, Lin Su, Songmin Ying, Zhimin Chen

Background: In the wake of COVID-19, a resurgence of Mycoplasma pneumoniae pneumonia (MPP) has emerged globally since mid-2023. However, the clinical manifestations and immune responses following infection vary across different age groups of pediatric patients (infants, preschoolers and school-aged children), increasing the complexity of diagnosis and treatment.

Methods: This study retrospectively analyzed serum cytokine levels in 40 healthy children and 87 MPP patients, with additional cytokine profiling of bronchoalveolar lavage fluid (BALF) in severe cases, combining KEGG pathway analysis to investigate age-related immune patterns. SARS-CoV-2 antibody levels were further detected in these MPP patients, followed by Spearman correlation analysis to assess their correlation with cytokines in MPP children.

Results: Age-specific cytokine patterns emerged in MPP children. In 0-2 years, cytokines enriched in IL-17, TLR, and TNF pathways were upregulated in MPP groups compared to controls, while in 6-12 years, cytokines enriched in TLR, RLR, and JAK-STAT pathways were downregulated in MPP groups. Serum patterns in 3-5 years resembled those in 0-2 years, but BALF aligned with 6-12 years. SARS-CoV-2 IgG positively correlated with TWEAK, IL-22, IL-16, IL-12p40, CCL7, and CD152 in 0-2 years (P < 0.05), but negatively with CCL13 in 6-12 years (P < 0.01).

Conclusion: Overall, the immune pattern in children with MPP is age-specific and severity-dependent. Higher levels of SARS-CoV-2 IgG are associated with a more robust and mature anti-infective immune response in younger MPP patients, while in older children, besides providing immune memory against pathogens, SARS-CoV-2 IgG also appears to plant a landmine of immune exhaustion.

背景:在2019冠状病毒病之后,自2023年年中以来,全球出现了肺炎支原体肺炎(MPP)的死灰复燃。然而,感染后的临床表现和免疫反应在不同年龄组的儿科患者(婴儿、学龄前儿童和学龄儿童)中存在差异,这增加了诊断和治疗的复杂性。方法:本研究回顾性分析了40例健康儿童和87例MPP患者的血清细胞因子水平,并在重症病例中增加了支气管肺泡灌洗液(BALF)的细胞因子谱,结合KEGG通路分析来研究年龄相关的免疫模式。在这些MPP患者中进一步检测SARS-CoV-2抗体水平,然后进行Spearman相关分析以评估其与MPP儿童细胞因子的相关性。结果:MPP患儿出现了年龄特异性的细胞因子模式。在0-2年,MPP组中IL-17、TLR和TNF通路中富集的细胞因子与对照组相比上调,而在6-12年,MPP组中TLR、RLR和JAK-STAT通路中富集的细胞因子在MPP组中下调。3 ~ 5年血清模式与0 ~ 2年相似,但BALF与6 ~ 12年一致。SARS-CoV-2 IgG在0 ~ 2年时与TWEAK、IL-22、IL-16、IL-12p40、CCL7、CD152呈正相关(P < 0.05),在6 ~ 12年时与CCL13呈负相关(P < 0.01)。结论:总体而言,MPP患儿的免疫模式具有年龄特异性和严重程度依赖性。在年轻的MPP患者中,较高水平的SARS-CoV-2 IgG与更强大和成熟的抗感染免疫反应有关,而在年龄较大的儿童中,除了提供针对病原体的免疫记忆外,SARS-CoV-2 IgG似乎还会埋下免疫衰竭的地雷。
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引用次数: 0
Development and Validation of an Explainable Machine Learning Model for Gangrenous Cholecystitis Prediction: A Multicenter Retrospective Study. 坏疽性胆囊炎预测的可解释机器学习模型的开发和验证:一项多中心回顾性研究。
IF 4.1 2区 医学 Q2 IMMUNOLOGY Pub Date : 2025-12-17 eCollection Date: 2025-01-01 DOI: 10.2147/JIR.S552926
Yilong Hu, Yunfeng Chen, Hailiang Zhao

Purpose: To develop and externally validate an interpretable machine learning model for preoperative prediction of Gangrenous cholecystitis (GC) using multicenter clinical data.

Patients and methods: This retrospective multicenter study included 744 patients with cholecystitis who underwent cholecystectomy at one institution, split into training (n=521) and testing (n=223) cohorts, and a temporal external validation cohort of 300 patients from a second center. Twenty preoperative variables were screened by LASSO regression and Boruta algorithm; predictors selected by both were used to construct six machine learning models. Model performance was assessed via AUC, calibration, and decision curve analysis. SHAP analysis provided model interpretability.

Results: The Random Forest (RF) model demonstrated superior predictive performance, achieving an AUC of 0.893 in the training set, 0.875 in the testing set, and 0.818 in external validation. Calibration and decision curve analyses indicated excellent agreement and clinical benefit. SHAP analysis identified gallbladder wall thickening, C-reactive protein, pericholecystic fluid, white blood cell count, and impacted stone as the most influential predictors, ensuring transparency of model decisions.

Conclusion: In our multicenter cohorts, this interpretable machine learning model showed good discrimination for preoperative risk stratification of gangrenous cholecystitis and acceptable generalizability between centers. By integrating clinical, laboratory, and imaging features and providing explainability, the approach may assist perioperative decision-making when used alongside clinical judgment. Prospective, multicenter evaluations and clinical impact studies are warranted before routine clinical adoption.

目的:利用多中心临床数据开发并外部验证一种可解释的机器学习模型,用于坏疽性胆囊炎(GC)的术前预测。患者和方法:这项回顾性多中心研究包括744名在一个机构接受胆囊切除术的胆囊炎患者,分为培训(n=521)和测试(n=223)队列,以及来自另一个中心的300名患者的临时外部验证队列。采用LASSO回归和Boruta算法筛选20个术前变量;两者选择的预测因子被用来构建六个机器学习模型。通过AUC、校准和决策曲线分析来评估模型的性能。SHAP分析提供了模型的可解释性。结果:随机森林(Random Forest, RF)模型表现出优异的预测性能,在训练集的AUC为0.893,在测试集的AUC为0.875,在外部验证的AUC为0.818。校准曲线和决策曲线分析显示了良好的一致性和临床效益。SHAP分析确定胆囊壁增厚、c反应蛋白、胆囊周液、白细胞计数和冲击结石是最具影响力的预测因素,确保了模型决策的透明度。结论:在我们的多中心队列中,这种可解释的机器学习模型对坏疽性胆囊炎的术前风险分层具有良好的区分能力,并且在中心之间具有可接受的通用性。通过整合临床、实验室和影像学特征,并提供可解释性,该方法可辅助围手术期决策和临床判断。在常规临床应用之前,有必要进行前瞻性、多中心评估和临床影响研究。
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引用次数: 0
Identification of Novel Biomarkers and Potential Therapeutic Targets for Systemic Sclerosis: An Integrated Analysis of Plasma Proteome-Wide Mendelian Randomization and Transcriptome. 鉴定新的生物标志物和系统性硬化症的潜在治疗靶点:血浆蛋白质组范围内孟德尔随机化和转录组的综合分析。
IF 4.1 2区 医学 Q2 IMMUNOLOGY Pub Date : 2025-12-17 eCollection Date: 2025-01-01 DOI: 10.2147/JIR.S561740
Hanchao Li, Qian Li, Xiaoxin Chen, Lingfei Mo, Yulu Wang, Xinyi Liu, Xiaohao Wang, Zechao Qu, Jing Wang, Yuanyuan Li

Background: Systemic sclerosis (SSc) is a complex autoimmune connective tissue disease. This study aimed to identify novel biomarkers for SSc through an integrated analysis of plasma proteome-wide Mendelian randomization (MR) and transcriptome, as well as to explore the potential mechanisms.

Methods: The data used were obtained from public databases. Initially, key plasma proteins causally associated with SSc were identified through a two-sample MR analysis. Subsequently, based on the key diseases related to both key plasma proteins (genes) and key drugs targeting these proteins (genes), phenotype scanning was conducted to predict potential adverse side effects of key plasma proteins (genes). Single-cell RNA sequencing (scRNA-seq) analysis was performed to identify key cell types in GSE138669 dataset. Differentially expressed genes (DEGs) within key cell types in SSc were intersected with genes encoding key plasma proteins to obtain candidate biomarkers, whose functions were subsequently explored. By analyzing candidate biomarker expression in GSE138669 and GSE181549 datasets, the biomarkers were identified. Further exploration included regulatory network, cellular heterogeneity, and cell trajectory analyses.

Results: Initially, 106 plasma proteins (corresponding to 104 genes) were identified. It was revealed that targeting 12 key plasma proteins (like CD40LG) for treating SSc might lead to side effects related to specific key diseases (like mesothelioma). After recognizing epithelial cells and fibroblasts as key cell types, 8 candidate biomarkers associated with pathways like "proteasome" were identified. Notably, CCL19 and LOXL2 were identified as biomarkers, which exhibited elevated expression in SSc. Regulatory elements such as FOXL1 and hsa-miR-5001-5p were predicted to target biomarkers. Remarkably, differentiation stages of key cell type with heterogeneity and the biomarker expression patterns across these stages might be associated with SSc progression.

Conclusion: CCL19 and LOXL2 were identified as novel biomarkers for SSc, providing insights into the exploration of the disease's pathogenesis and the development of new therapeutic targets.

背景:系统性硬化症(SSc)是一种复杂的自身免疫性结缔组织疾病。本研究旨在通过血浆蛋白质组孟德尔随机化(MR)和转录组的综合分析,鉴定SSc的新生物标志物,并探讨其潜在的机制。方法:数据来源于公共数据库。最初,通过两个样本的MR分析确定了与SSc相关的关键血浆蛋白。随后,根据关键血浆蛋白(基因)相关的关键疾病和针对这些蛋白(基因)的关键药物,进行表型扫描,预测关键血浆蛋白(基因)潜在的不良副作用。通过单细胞RNA测序(scRNA-seq)分析确定GSE138669数据集中的关键细胞类型。将SSc关键细胞类型中的差异表达基因(DEGs)与编码关键血浆蛋白的基因相交,获得候选生物标志物,随后探索其功能。通过分析候选生物标志物在GSE138669和GSE181549数据集中的表达,鉴定出候选生物标志物。进一步的探索包括调控网络、细胞异质性和细胞轨迹分析。结果:初步鉴定出106个血浆蛋白(对应104个基因)。研究发现,靶向12个关键血浆蛋白(如CD40LG)治疗SSc可能导致与特定关键疾病(如间皮瘤)相关的副作用。在识别上皮细胞和成纤维细胞为关键细胞类型后,确定了8个与“蛋白酶体”等途径相关的候选生物标志物。值得注意的是,CCL19和LOXL2被鉴定为生物标志物,它们在SSc中表达升高。FOXL1和hsa-miR-5001-5p等调控元件被预测为靶向生物标志物。值得注意的是,具有异质性的关键细胞类型的分化阶段和这些阶段的生物标志物表达模式可能与SSc的进展有关。结论:CCL19和LOXL2被确定为SSc的新生物标志物,为探索SSc的发病机制和开发新的治疗靶点提供了新的见解。
{"title":"Identification of Novel Biomarkers and Potential Therapeutic Targets for Systemic Sclerosis: An Integrated Analysis of Plasma Proteome-Wide Mendelian Randomization and Transcriptome.","authors":"Hanchao Li, Qian Li, Xiaoxin Chen, Lingfei Mo, Yulu Wang, Xinyi Liu, Xiaohao Wang, Zechao Qu, Jing Wang, Yuanyuan Li","doi":"10.2147/JIR.S561740","DOIUrl":"10.2147/JIR.S561740","url":null,"abstract":"<p><strong>Background: </strong>Systemic sclerosis (SSc) is a complex autoimmune connective tissue disease. This study aimed to identify novel biomarkers for SSc through an integrated analysis of plasma proteome-wide Mendelian randomization (MR) and transcriptome, as well as to explore the potential mechanisms.</p><p><strong>Methods: </strong>The data used were obtained from public databases. Initially, key plasma proteins causally associated with SSc were identified through a two-sample MR analysis. Subsequently, based on the key diseases related to both key plasma proteins (genes) and key drugs targeting these proteins (genes), phenotype scanning was conducted to predict potential adverse side effects of key plasma proteins (genes). Single-cell RNA sequencing (scRNA-seq) analysis was performed to identify key cell types in GSE138669 dataset. Differentially expressed genes (DEGs) within key cell types in SSc were intersected with genes encoding key plasma proteins to obtain candidate biomarkers, whose functions were subsequently explored. By analyzing candidate biomarker expression in GSE138669 and GSE181549 datasets, the biomarkers were identified. Further exploration included regulatory network, cellular heterogeneity, and cell trajectory analyses.</p><p><strong>Results: </strong>Initially, 106 plasma proteins (corresponding to 104 genes) were identified. It was revealed that targeting 12 key plasma proteins (like CD40LG) for treating SSc might lead to side effects related to specific key diseases (like mesothelioma). After recognizing epithelial cells and fibroblasts as key cell types, 8 candidate biomarkers associated with pathways like \"proteasome\" were identified. Notably, CCL19 and LOXL2 were identified as biomarkers, which exhibited elevated expression in SSc. Regulatory elements such as FOXL1 and hsa-miR-5001-5p were predicted to target biomarkers. Remarkably, differentiation stages of key cell type with heterogeneity and the biomarker expression patterns across these stages might be associated with SSc progression.</p><p><strong>Conclusion: </strong>CCL19 and LOXL2 were identified as novel biomarkers for SSc, providing insights into the exploration of the disease's pathogenesis and the development of new therapeutic targets.</p>","PeriodicalId":16107,"journal":{"name":"Journal of Inflammation Research","volume":"18 ","pages":"17561-17588"},"PeriodicalIF":4.1,"publicationDate":"2025-12-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12718514/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145810247","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Anti-Inflammatory Combinations Targeting Oncostatin M Gene to Remodel Intestinal Flora and Alleviate Inflammation of Perianal Ulcer in Rats. 靶向抑癌素M基因的抗炎联合用药对大鼠肠道菌群的重塑及对肛周溃疡炎症的缓解作用
IF 4.1 2区 医学 Q2 IMMUNOLOGY Pub Date : 2025-12-17 eCollection Date: 2025-01-01 DOI: 10.2147/JIR.S546010
Yanlan Wu, Hao Ge, Haoran Zhao, Kaiping Zou, Pei Wang, Yi Wang, Yang Zhang

Background: Perianal Abscess is an inflammatory disease caused by infection in the perianal area, characterized by inflammatory cell infiltration and imbalance of intestinal flora. The herbal medicine anti-inflammatory combination (KYHJ) has therapeutic effects in acute and chronic soft tissue infections, but the specific therapeutic mechanism in perianal inflammatory diseases is unclear. There is a literature evidence showing the role of OSM gene in inflammatory conditions, however this was not previously studied in perianal abscess.

Methods: A perianal inflammation model was constructed in SD rats using 75% glacial acetic acid and treated with different doses of KYHJ; genome-wide changes were detected by RNA sequencing. H&E staining observed pathological states, TUNEL kit detected apoptosis, WB measured apoptotic protein levels, ELISA detected inflammatory factors in serum, and 16S rRNA sequencing analyzed intestinal flora abundance. In vitro, an anal epithelial cell inflammation model induced by LPS was treated with 10% KYHJ-containing serum; EDU assay, flow cytometry, WB, and ELISA were used to detect cell proliferation, apoptosis, related protein levels, and inflammatory factor secretion. Oncostatin M gene was knocked down in rats and overexpressed in epithelial cells for mechanism exploration.

Results: Results showed that KYHJ ameliorated perianal tissue inflammatory infection, inhibited apoptosis, and restored intestinal flora abundance. Initial transcriptome analysis, RT-qPCR and WB performed in this study have additionally supported the role of OSM gene. RNA sequencing linked the tested anti-inflammatory effects of KYHJ to reduced Oncostatin M (OSM) gene expression. RNA transcriptome sequencing showed high Oncostatin M expression in inflamed rats and low expression in the KYHJ group; in vivo knockdown improved perianal inflammation and increased flora abundance. In vitro, KYHJ - containing serum inhibited LPS - induced apoptosis, promoted proliferation, and reduced inflammatory factor secretion, which were reversed by Oncostatin M overexpression.

Conclusion: KYHJ ameliorates perianal inflammatory diseases by targeting Oncostatin M, restoring intestinal flora imbalance, promoting cell proliferation, and inhibiting apoptosis.

背景:肛周脓肿是一种由肛周感染引起的炎症性疾病,以炎症细胞浸润和肠道菌群失衡为特征。中药抗炎联合疗法(KYHJ)对急慢性软组织感染均有治疗作用,但对肛周炎症性疾病的具体治疗机制尚不清楚。有文献证据表明OSM基因在炎症条件中的作用,但这在以前没有研究过肛周脓肿。方法:采用75%冰醋酸建立SD大鼠肛周炎症模型,并用不同剂量的KYHJ处理;通过RNA测序检测全基因组变化。H&E染色观察病理状态,TUNEL试剂盒检测细胞凋亡,WB检测凋亡蛋白水平,ELISA检测血清炎症因子,16S rRNA测序分析肠道菌群丰度。在体外,用含10% kyhj的血清处理LPS诱导的肛门上皮细胞炎症模型;EDU法、流式细胞术、WB法、ELISA法检测细胞增殖、凋亡、相关蛋白水平及炎性因子分泌。在大鼠中敲低抑癌素M基因并在上皮细胞中过表达,探讨其机制。结果:KYHJ改善肛周组织炎症感染,抑制细胞凋亡,恢复肠道菌群丰度。本研究的初始转录组分析、RT-qPCR和WB也支持了OSM基因的作用。RNA测序将KYHJ的抗炎作用与降低肿瘤抑制素M (OSM)基因表达联系起来。RNA转录组测序显示,炎症大鼠中Oncostatin M高表达,KYHJ组低表达;体内敲除可改善肛周炎症并增加菌群丰度。在体外,含KYHJ的血清抑制LPS诱导的细胞凋亡,促进细胞增殖,减少炎症因子分泌,这一作用被Oncostatin M过表达逆转。结论:KYHJ通过靶向Oncostatin M,恢复肠道菌群失衡,促进细胞增殖,抑制细胞凋亡,改善肛周炎性疾病。
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引用次数: 0
Severe Dry Cough Followed by Eosinophilia Without Pulmonary Infiltrates After Dupilumab Treatment in Patients with Severe Asthma: A Series of Five Cases. 重症哮喘患者Dupilumab治疗后严重干咳伴嗜酸性粒细胞增多无肺浸润:5例分析
IF 4.1 2区 医学 Q2 IMMUNOLOGY Pub Date : 2025-12-17 eCollection Date: 2025-01-01 DOI: 10.2147/JIR.S545661
Yan Chen, Jiaxing Xie

Purpose: Dupilumab is known to cause transient, asymptomatic eosinophilia, but in rare cases it can present as eosinophilic pneumonia accompanied by cough. This study reports a distinct manifestation of dupilumab-related eosinophilia presenting as a severe dry cough despite the absence of radiological or clinical evidence of eosinophilic pneumonia.

Patients and methods: A retrospective analysis of clinical data from patients with severe eosinophilic asthma (SEA) treated with dupilumab at the Guangzhou Institute of Respiratory Disease between August 2020 and February 2025 was conducted. Data on clinical manifestations, objective indicators and subjective questionnaires were collected at four time-points: before dupilumab initiation, preceding dupilumab-related cough, during the cough episode, and after cough resolution.

Results: Five patients treated with dupilumab (three males and two females with a mean age of 65.6 ± 9.2 years) developed a severe dry cough and marked eosinophilia (1,130-4,050 cells/μL) without radiologic or clinical evidence of eosinophilic pneumonia. The cough began after one to eleven dupilumab courses. Despite the increase in eosinophils, all patients achieved their personal best FEV1 versus baseline. The symptoms resolved with a short course of systemic corticosteroids (in four patients) or antitussive therapy alone (in one patient).

Conclusion: Dupilumab-related eosinophilia can manifest as a severe, steroid-responsive coughing despite the absence of parenchymal eosinophilic disease.

目的:已知Dupilumab会引起短暂的无症状嗜酸性粒细胞增多,但在极少数情况下,它可以表现为嗜酸性粒细胞性肺炎伴咳嗽。本研究报告了杜匹单抗相关嗜酸性粒细胞增多的明显表现,表现为严重干咳,尽管缺乏嗜酸性粒细胞肺炎的放射学或临床证据。患者和方法:回顾性分析2020年8月至2025年2月在广州呼吸疾病研究所接受dupilumab治疗的严重嗜酸性哮喘(SEA)患者的临床资料。在四个时间点收集临床表现、客观指标和主观问卷的数据:杜匹单抗开始前、杜匹单抗相关咳嗽之前、咳嗽发作期间和咳嗽消退后。结果:5例接受dupilumab治疗的患者(男3例,女2例,平均年龄65.6±9.2岁)出现严重干咳和明显嗜酸性粒细胞增多(1130 ~ 4050个细胞/μL),无嗜酸性粒细胞肺炎的影像学或临床证据。咳嗽开始于1 - 11个dupilumab疗程后。尽管嗜酸性粒细胞增加,但所有患者与基线相比均达到了个人最佳FEV1。4例患者接受短期全身性皮质类固醇治疗或1例患者单独接受止咳治疗后症状消失。结论:dupilumab相关嗜酸性粒细胞增多可表现为严重的类固醇反应性咳嗽,尽管没有实质嗜酸性粒细胞增多疾病。
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引用次数: 0
Identifying Genetic Factors Influencing the Development of Anti-Drug Antibodies in Inflammatory Bowel Disease: A Scoping Review. 确定影响炎症性肠病中抗药物抗体发展的遗传因素:范围综述
IF 4.1 2区 医学 Q2 IMMUNOLOGY Pub Date : 2025-12-17 eCollection Date: 2025-01-01 DOI: 10.2147/JIR.S546252
Frederikke Bindseil Culmsee-Holm, Emil Buhl, Mads Tjørnehøj Kraaer, Casper Steenholdt, Mark Andrew Ainsworth

Biologic therapies such as infliximab and adalimumab have transformed the management of inflammatory bowel disease. However, many patients experience primary or secondary loss of response, often due to the development of anti-drug antibodies. The cause of anti-drug antibody formation is thought to be influenced by genetic variations, with human leukocyte antigen alleles-particularly HLA-DQA1*05-emerging as consistent risk factors for immunogenicity, but other candidate variants may also be of importance. To explore the role of genetic predictors in anti-drug antibody development, we systematically reviewed the literature. A search of Medline, Embase, and the Cochrane Library identified 1944 records, of which 27 studies met inclusion criteria. Across these studies, HLA-DQA1*05 carriage was repeatedly associated with higher antibody formation, lower drug levels, treatment failure, and secondary loss of response. Other HLA alleles and FCGR3A variants were also linked to increased risk, while some haplotypes appeared protective. Findings varied depending on the drug, genetic background, and patient population. The role of concomitant immunomodulator therapy was inconsistent, though some genotypes appeared to benefit. Overall, HLA-DQA1*05 and FCGR3A variants are the most reliable predictors of immunogenicity, particularly in infliximab-treated patients. Future work should prioritize large, multi-ethnic prospective studies with standardized antibody measurements and integrated pharmacogenomic approaches to establish clinical utility.

英夫利昔单抗和阿达木单抗等生物疗法已经改变了炎症性肠病的治疗。然而,许多患者经历原发性或继发性反应丧失,通常是由于抗药物抗体的发展。抗药抗体形成的原因被认为受到遗传变异的影响,人类白细胞抗原等位基因——特别是HLA-DQA1*05——成为免疫原性的一致危险因素,但其他候选变异也可能很重要。为了探讨遗传预测因子在抗药物抗体发展中的作用,我们系统地回顾了相关文献。对Medline、Embase和Cochrane图书馆的检索确定了1944项记录,其中27项研究符合纳入标准。在这些研究中,HLA-DQA1*05携带反复与较高的抗体形成、较低的药物水平、治疗失败和继发性反应丧失相关。其他HLA等位基因和FCGR3A变异也与风险增加有关,而一些单倍型似乎具有保护作用。结果因药物、遗传背景和患者群体而异。伴随免疫调节治疗的作用是不一致的,尽管一些基因型似乎受益。总体而言,HLA-DQA1*05和FCGR3A变异是免疫原性最可靠的预测因子,特别是在英夫利昔单抗治疗的患者中。未来的工作应优先考虑采用标准化抗体测量和综合药物基因组学方法的大型、多民族前瞻性研究,以建立临床效用。
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引用次数: 0
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Journal of Inflammation Research
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