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2013 IEEE Pacific Visualization Symposium (PacificVis)最新文献

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A generative layout approach for rooted tree drawings 根树图的生成布局方法
Pub Date : 2013-09-12 DOI: 10.1109/PacificVis.2013.6596149
Hans-Jörg Schulz, Z. Akbar, F. Maurer
In response to the large number of existing tree layouts, generic “meta-layouts” have recently been proposed. These generic approaches utilize layout design spaces to pinpoint a tree drawing with desired characteristics in the wealth of available drawing options and parameters. While design-space-based generic layouts work well for the confined set of implicit space-filling tree layouts, they have so far eluded their extension to explicit node-link diagrams. In order to produce both, implicit and explicit tree layouts, this paper parts with the descriptive nature of the design spaces and instead takes a generative approach based on operators. As these operators can be combined into operator sequences and be used at different stages of the layout process, a small operator set already suffices to yield a large number of different tree layouts. To this end, we present a generic tree layout pipeline and give examples of suitable layout operators to plug into the pipeline. A prototypical implementation of our pipeline and operators is presented, and it is illustrated with space-filling and node-link examples. Furthermore, the paper presents results from a user study evaluating our generative approach as it is realized by the prototype.
针对大量现有的树布局,最近提出了通用的“元布局”。这些通用方法利用布局设计空间,在丰富的可用绘图选项和参数中精确定位具有所需特征的树形绘图。虽然基于设计空间的通用布局对于有限的隐式空间填充树布局来说工作得很好,但到目前为止,它们还没有扩展到显式的节点链接图。为了生成隐式和显式树布局,本文与设计空间的描述性本质分开,而是采用基于运算符的生成方法。由于这些操作符可以组合成操作符序列,并在布局过程的不同阶段使用,一个小的操作符集已经足以产生大量不同的树布局。为此,我们提出了一个通用的树形布局管道,并给出了适当的布局操作符的示例。给出了我们的管道和操作符的一个原型实现,并通过空间填充和节点链接的例子进行了说明。此外,本文还介绍了一个用户研究的结果,该结果在原型实现时对我们的生成方法进行了评估。
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引用次数: 19
GraphCharter: Combining browsing with query to explore large semantic graphs GraphCharter:结合浏览和查询来探索大型语义图
Pub Date : 2013-09-12 DOI: 10.1109/PacificVis.2013.6596127
Ying Tu, Han-Wei Shen
Large scale semantic graphs such as social networks and knowledge graphs contain rich and useful information. However, due to combined challenges in scale, density, and heterogeneity, it is impractical for users to answer many interesting questions by visual inspection alone. This is because even a semantically simple question, such as which of my extended friends are also fans of my favorite band, can in fact require information from a non-trivial number of nodes to answer. In this paper, we propose a method that combines graph browsing with query to overcome the limitation of visual inspection. By using query as the main way for information discovery in graph exploration, our “query, expand, and query again” model enables users to probe beyond the visible part of the graph and only bring in the interesting nodes, leaving the view clutter-free. We have implemented a prototype called GraphCharter and demonstrated its effectiveness and usability in a case study and a user study on Freebase knowledge graph with millions of nodes and edges.
大规模的语义图,如社交网络和知识图,包含了丰富而有用的信息。然而,由于规模、密度和异质性的综合挑战,用户仅通过视觉检查来回答许多有趣的问题是不切实际的。这是因为即使是一个语义上简单的问题,比如我的朋友中哪一个也是我最喜欢的乐队的粉丝,实际上也可能需要来自大量节点的信息来回答。本文提出了一种将图形浏览与查询相结合的方法来克服视觉检测的局限性。通过将查询作为图探索中信息发现的主要方式,我们的“查询、展开、再查询”模型使用户能够探测图的可见部分之外,只引入感兴趣的节点,使视图没有杂乱。我们已经实现了一个名为GraphCharter的原型,并在Freebase知识图谱的案例研究和用户研究中展示了它的有效性和可用性。
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引用次数: 12
Smooth bundling of large streaming and sequence graphs 大型流和序列图的平滑捆绑
Pub Date : 2013-09-12 DOI: 10.1109/PacificVis.2013.6596126
C. Hurter, O. Ersoy, A. Telea
Dynamic graphs are increasingly pervasive in modern information systems. However, understanding how a graph changes in time is difficult. We present here two techniques for simplified visualization of dynamic graphs using edge bundles. The first technique uses a recent image-based graph bundling method to create smoothly changing bundles from streaming graphs. The second technique incorporates additional edge-correspondence data and is thereby suited to visualize discrete graph sequences. We illustrate our methods with examples from real-world large dynamic graph datasets.
动态图在现代信息系统中越来越普遍。然而,理解图形如何随时间变化是困难的。我们在此介绍两种使用边束简化动态图可视化的技术。第一种技术使用最新的基于图像的图绑定方法,从流图创建平滑变化的包。第二种技术包含附加的边缘对应数据,因此适合于可视化离散图序列。我们用来自现实世界的大型动态图形数据集的示例来说明我们的方法。
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引用次数: 44
Local WYSIWYG volume visualization 本地所见即所得体积可视化
Pub Date : 2013-09-12 DOI: 10.1109/PacificVis.2013.6596129
Hanqi Guo, Xiaoru Yuan
In this paper, we propose a novel volume visualization system enabling local transfer function specification through direct painting or sketching on the rendered image, in a WYSIWYG style. Localized transfer functions are defined on scalar topology regions specified by the user. Intelligent and fast feature inference algorithms have been developed to convert user's input to the region specification and to achieve desirable feature styles with the local transfer functions. In our system, users can not only manipulate the color appearance of the object volume, but also apply style transfer and generate various illustration styles with a unified input gesture. Without manual transfer function editing and without parameter specification, our system is capable of generating informative illustrations that intuitively highlight user specified local features.
在本文中,我们提出了一种新颖的体可视化系统,通过在渲染图像上直接绘画或素描,以所见即所得的方式实现局部传递函数规范。局域传递函数定义在用户指定的标量拓扑区域上。为了将用户输入的特征转换为区域规范,并利用局部传递函数获得理想的特征样式,开发了智能、快速的特征推理算法。在我们的系统中,用户不仅可以操纵物体体积的颜色外观,还可以使用统一的输入手势进行样式转移并生成各种插图样式。无需手动传递函数编辑和参数说明,我们的系统能够生成信息丰富的插图,直观地突出用户指定的局部特征。
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引用次数: 24
Constrained optimization for disoccluding geographic landmarks in 3D urban maps 三维城市地图中地理地标解除遮挡的约束优化
Pub Date : 2013-09-12 DOI: 10.1109/PacificVis.2013.6596123
Daichi Hirono, Hsiang-Yun Wu, M. Arikawa, Shigeo Takahashi
In composing hand-drawn 3D urban maps, the most common design problem is to avoid overlaps between geographic features such as roads and buildings by displacing them consistently over the map domain. Nonetheless, automating this map design process is still a challenging task because we have to maximally retain the 3D depth perception inherent in pairs of parallel lines embedded in the original layout of such geographic features. This paper presents a novel approach to disoccluding important geographic features when creating 3D urban maps for enhancing their visual readability. This is accomplished by formulating the design criteria as a constrained optimization problem based on the linear programming approach. Our mathematical formulation allows us to systematically eliminate occlusions of landmark roads and buildings, and further controls the degree of local 3D map deformation by devising an objective function to be minimized. Various design examples together with a user study are presented to demonstrate the robustness and feasibility of the proposed approach.
在绘制手绘3D城市地图时,最常见的设计问题是避免地理特征(如道路和建筑物)在地图域上的重叠。尽管如此,自动化这一地图设计过程仍然是一项具有挑战性的任务,因为我们必须最大限度地保留嵌入在这些地理特征的原始布局中的平行线对固有的3D深度感知。本文提出了一种在创建三维城市地图时消除重要地理特征的新方法,以提高其视觉可读性。这是通过将设计准则表述为基于线性规划方法的约束优化问题来实现的。我们的数学公式使我们能够系统地消除地标道路和建筑物的遮挡,并通过设计最小化目标函数进一步控制局部3D地图变形的程度。各种设计实例与用户研究一起展示了所提出的方法的鲁棒性和可行性。
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引用次数: 16
Reordering Massive Sequence Views: Enabling temporal and structural analysis of dynamic networks 重排序大量序列视图:启用动态网络的时间和结构分析
Pub Date : 2013-09-12 DOI: 10.1109/PacificVis.2013.6596125
S. V. D. Elzen, Danny Holten, Jorik Blaas, J. V. Wijk
Networks are present in many fields such as finance, sociology, and transportation. Often these networks are dynamic: they have a structural as well as a temporal aspect. We present a technique that extends the Massive Sequence View (MSV) for the analysis of the temporal and structural aspects of dynamic networks. Using features in the data as well as in the visualization based on the Gestalt principles closure, proximity, and similarity, we developed node reordering strategies for the MSV to make these features stand out. This enables users to find temporal properties such as trends, counter trends, periodicity, temporal shifts, and anomalies in the network as well as structural properties such as communities and stars. We show the effectiveness of the reordering methods on both synthetic and real-world transaction data sets.
网络存在于许多领域,如金融、社会学和交通运输。这些网络通常是动态的:它们既有结构方面的,也有时间方面的。我们提出了一种扩展大规模序列视图(MSV)的技术,用于分析动态网络的时间和结构方面。利用数据中的特征以及基于格式塔原则的可视化中的特征,我们为MSV开发了节点重新排序策略,以使这些特征脱颖而出。这使用户能够发现网络中的时间属性,如趋势、反趋势、周期性、时间变化和异常,以及结构属性,如社区和明星。我们展示了重新排序方法在合成和真实事务数据集上的有效性。
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引用次数: 29
Joint Contour Nets: Computation and properties 联合轮廓网:计算与性质
Pub Date : 2013-09-12 DOI: 10.1109/PACIFICVIS.2013.6596141
H. Carr, D. Duke
Contour trees and Reeb graphs are firmly embedded in scientific visualization for analysing univariate (scalar) fields. We generalize this analysis to multivariate fields with a data structure called the Joint Contour Net that quantizes the variation of multiple variables simultaneously. We report the first algorithm for constructing the Joint Contour Net and demonstrate that Contour Trees for individual variables can be extracted from the Joint Contour Net.
等高线树和Reeb图牢固地嵌入在分析单变量(标量)场的科学可视化中。我们用一种称为联合轮廓网的数据结构将这种分析推广到多元领域,该数据结构同时量化了多个变量的变化。本文提出了构建联合轮廓网的第一种算法,并证明了可以从联合轮廓网中提取单个变量的轮廓树。
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引用次数: 25
A visual analytics approach to exploring protein flexibility subspaces 探索蛋白质柔性子空间的可视化分析方法
Pub Date : 2013-09-12 DOI: 10.1109/PacificVis.2013.6596145
S. Barlowe, Jing Yang, D. Jacobs, D. Livesay, J. Alsakran, Ye Zhao, Deeptak Verma, J. Mottonen
Understanding what causes proteins to change shape and how the resulting shape influences function will expedite the design of more narrowly focused drugs and therapies. Shape alterations are often the result of flexibility changes in a set of localized neighborhoods that may or may not act in concert. Computational models have been developed to predict flexibility changes under varying empirical parameters. In this paper, we tackle a significant challenge facing scientists when analyzing outputs of a computational model, namely how to identify, examine, compare, and group interesting neighborhoods of proteins under different parameter sets. This is a difficult task since comparisons over protein subunits that comprise diverse neighborhoods are often too complex to characterize with a simple metric and too numerous to analyze manually. Here, we present a series of novel visual analytics approaches toward addressing this task. User scenarios illustrate the utility of these approaches and feedback from domain experts confirms their effectiveness.
了解是什么原因导致蛋白质改变形状,以及由此产生的形状如何影响功能,将加快更专注于药物和疗法的设计。形状变化通常是一系列局部社区的灵活性变化的结果,这些社区可能会或可能不会协同行动。计算模型已经开发,以预测柔性变化在不同的经验参数。在本文中,我们解决了科学家在分析计算模型输出时面临的一个重大挑战,即如何在不同参数集下识别、检查、比较和分组感兴趣的蛋白质邻域。这是一项困难的任务,因为对包含不同邻域的蛋白质亚基的比较通常太复杂,无法用简单的度量来表征,而且数量太多,无法手动分析。在这里,我们提出了一系列新的可视化分析方法来解决这个问题。用户场景说明了这些方法的实用性,领域专家的反馈也证实了它们的有效性。
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引用次数: 3
Illustrative visualization of cardiac and aortic blood flow from 4D MRI data 4D MRI数据显示心脏和主动脉血流
Pub Date : 2013-09-12 DOI: 10.1109/PacificVis.2013.6596137
Silvia Born, M. Markl, M. Gutberlet, G. Scheuermann
In the last years, illustrative methods have found their way into flow visualization since they communicate difficult information in a comprehensible way. This is of great benefit especially in domains where the audience does not necessarily have flow expertise. One such domain is the medical field where the development of 4D MR imaging (for in-vivo 3D blood flow measurement) lead to an increased demand for easy flow analysis techniques. The goal and the challenge is to transfer the data into simple visualizations supporting the physician with flow interpretation and decision making. In this work, we take one step towards this goal. We present an approach for the illustrative visualization of steady flow features occurring in 4D MRI data of heart and aorta. Like shown in manually created illustrations, we restrict our visualization to the main data characteristics and do not depict every flow detail. The input for our method are flow features extracted from a dataset's complete set of streamlines with the help of line predicates. We create an abstract depiction of these line bundles by selecting a set of bundle representatives reflecting the most important flow aspects. These lines are rendered as three-dimensional arrows that are fused in areas where they represent the same flow. Since vortices are another important flow information for a physician, we identify these regions in the 4D MRI data and display them as unobtrusive, tube-like structures. A hatching texture provides for a visual effect of rotational blood flow. By applying our illustration technique to diverse flow structures of several 4D MRI datasets, we demonstrate that the abstract visualization is useful to gain an easier insight into the data. Feedback of medical experts confirmed the usefulness and revealed limitations of our work. The images are restricted to the essential flow features and, therefore, clearer and less cluttered. Our method has great potential and offers many possible applications, e.g., in comparative visualization and also beyond the medical domain.
在过去的几年里,说明性方法已经在流可视化中找到了自己的方式,因为它们以一种可理解的方式传达了难以理解的信息。这是非常有益的,特别是在那些受众不一定具有流专业知识的领域。其中一个领域是医学领域,其中4D MR成像(用于体内3D血流测量)的发展导致对易于流动分析技术的需求增加。目标和挑战是将数据转换为简单的可视化,以支持医生进行流解释和决策。在这项工作中,我们朝着这个目标迈出了一步。我们提出了一种在心脏和主动脉的四维MRI数据中发生的稳定血流特征的说明性可视化方法。与手工创建的插图一样,我们将可视化限制在主要数据特征上,而不描述每个流程细节。我们的方法的输入是在线谓词的帮助下从数据集的完整流线集合中提取的流特征。我们通过选择一组反映最重要流方面的束表示来创建这些行束的抽象描述。这些线呈现为三维箭头,在它们表示相同流的区域融合在一起。由于漩涡是医生的另一个重要的流动信息,我们在4D MRI数据中识别这些区域,并将其显示为不显眼的管状结构。孵化纹理提供了旋转血流的视觉效果。通过将我们的演示技术应用于几个4D MRI数据集的不同流结构,我们证明了抽象可视化有助于更容易地了解数据。医学专家的反馈证实了我们工作的有效性,同时也揭示了我们工作的局限性。图像被限制在基本的流特征,因此,更清晰,更少混乱。我们的方法有很大的潜力,提供了许多可能的应用,例如,在比较可视化和医疗领域之外。
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引用次数: 33
iTree: Exploring time-varying data using indexable tree iTree:使用可索引树探索时变数据
Pub Date : 2013-09-12 DOI: 10.1109/PacificVis.2013.6596138
Yi Gu, Chaoli Wang
Significant advances have been made in time-varying data analysis and visualization, mainly in improving our ability to identify temporal trends and classify the underlying data. However, the ability to perform cost-effective data querying and indexing is often not incorporated, which posts a serious limitation as the size of time-varying data continue to grow. In this paper, we present a new approach that unifies data compacting, indexing and classification into a single framework. We achieve this by transforming the time-activity curve representation of a time-varying data set into a hierarchical symbolic representation. We further build an indexable version of the data hierarchy, from which we create the iTree for visual representation of the time-varying data. A hyperbolic layout algorithm is employed to draw the iTree with a large number of nodes and provide focus+context visualization for interaction. We achieve effective querying, searching and tracking of time-varying data sets by enabling multiple coordinated views consisting of the iTree, the symbolic view and the spatial view.
时变数据分析和可视化取得了重大进展,主要是提高了我们识别时间趋势和分类基础数据的能力。然而,执行经济有效的数据查询和索引的能力通常没有被纳入,随着时变数据的大小不断增长,这将带来严重的限制。在本文中,我们提出了一种将数据压缩、索引和分类统一到一个框架中的新方法。我们通过将时变数据集的时间-活动曲线表示转换为分层符号表示来实现这一点。我们进一步构建数据层次结构的可索引版本,并以此为基础创建iTree,用于可视地表示时变数据。采用双曲布局算法绘制具有大量节点的iTree,为交互提供焦点+上下文可视化。我们通过启用由iTree视图、符号视图和空间视图组成的多个协调视图,实现对时变数据集的有效查询、搜索和跟踪。
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引用次数: 14
期刊
2013 IEEE Pacific Visualization Symposium (PacificVis)
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