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Differentiation of the Generation Potential of the Menilite and Istebna Beds of the Silesian Unit in the Carpathians Based on a Compiled Pyrolytic Studies 喀尔巴阡山脉西里西亚单元Menilite层和Istebna层生成潜力的划分——基于热解合集研究
Pub Date : 2021-10-20 DOI: 10.2139/ssrn.3870968
I. Matyasik, M. Labus, M. Kierat, K. Spunda
The study of the source rocks was carried out with the use of various analytical methods in order to assess their generation potential and to predict the decomposition products of organic matter. The selected samples from the Menilite Beds from the Silesian and Dukla units, as well as the Istebna layers from the Silesian unit, which are classified as weak and medium source rocks in the Carpathian oil system, were examined. The generation potential and type of the products obtained from the pyrolysis of the analyzed source rocks, despite the often comparable overall content of organic matter, are significantly different. Menilite shale generated a higher abundance of hydrocarbons (alkanes, alkenes, and isoalkanes) by stage pyrolysis, which suggested that the organic matter of Menilite shale is different from the Istebna source rocks. Moreover, the thermogravimetric analysis showed a two-stage weight loss in the case of Menilite shales, while the Istebna shales were characterized by a one-stage weight loss at higher temperature. For the Istebna layers, n-alkanes from the C1–C5 range were detected as the main pyrolysis products, which proves the gas-forming type of the organic matter dispersed in these sediments. Rock-Eval analyses showed that the organic matter reached a degree of maturity corresponding to the early thermocatalytic processes (the initial oil window stage) and therefore was able to generate liquid and gaseous hydrocarbons. The comparison of the decomposition temperatures of the organic matter from the Rock-Eval and TG analyses allowed us to conclude that both measurements correlate well and can be equally used to assess the level of thermal transformations of organic matter.
利用各种分析方法对烃源岩进行了研究,以评估其生成潜力并预测有机质的分解产物。选取了喀尔巴阡盆地弱、中烃源岩的西里西亚组Menilite层和Dukla层以及西里西亚组Istebna层样品进行了研究。所分析的烃源岩尽管有机质总体含量大体相当,但其热解生成潜力和产物类型却存在显著差异。Menilite页岩阶段热解生成的烃类(烷烃、烯烃和异烷烃)丰度较高,表明Menilite页岩有机质与istbna烃源岩不同。此外,热重分析显示,Menilite页岩的减重过程为两阶段,而Istebna页岩在较高温度下的减重过程为一阶段。isstebna层主要热解产物为c1 ~ c5段的正构烷烃,证明了该层中分散有机质的成气类型。Rock-Eval分析表明,有机质达到了与早期热催化作用(初始油窗阶段)相对应的成熟程度,因此能够生成液态和气态烃。通过岩石分析和热重分析对有机物的分解温度进行比较,我们得出结论,这两种测量结果相关性很好,可以同样用于评估有机物的热转化水平。
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引用次数: 0
Self-Assembled PEGylated Amphiphilic Polypeptides for Gene Transfection 用于基因转染的自组装聚乙二醇两亲性多肽
Pub Date : 2021-10-13 DOI: 10.2139/ssrn.3849029
P. Klemm, Mira Behnke, Jana I. Solomun, Colin Bonduelle, S. Lecommandoux, Anja Traeger, S. Schubert
In the present study, three biodegradable block copolymers composed of a poly(ethylene glycol) block and a copolypeptide block with varying compositions of cationic L-lysine (L-Lys) and hydrophobic benzyl-L-glutamate (Bzl-L-Glu) were designed for gene delivery applications. The polypeptides were synthesized by ring opening polymerization (ROP) and after orthogonal deprotection of Boc-L-Lys side chains, the polymer exhibited an amphiphilic character. To bind or encapsulate plasmid DNA (pDNA), different formulations were investigated: a nanoprecipitation and an emulsion technique using various organic solvents as well as an aqueous pH-controlled formulation method. The complex and nanoparticle (NP) formations were monitored by dynamic light scattering (DLS), and pDNA interaction was shown by gel electrophoresis and subsequent controlled release with heparin. The polypeptides were further tested for their cytotoxicity as well as biodegradability. The complexes and NPs presenting the most promising size distributions and pDNA binding ability were subsequently evaluated for their transfection efficiency in HEK293T cells. The highest transfection efficiencies were obtained with an aqueous formulation of the polypeptide containing the highest L-Lys content and lowest proportion of hydrophobic, helical structures (P1*), which is therefore a promising candidate for efficient gene delivery by biodegradable gene delivery vectors.
在本研究中,设计了三种由聚乙二醇嵌段和共肽嵌段组成的可生物降解嵌段共聚物,这些嵌段共聚物含有不同组成的阳离子l-赖氨酸(L-Lys)和疏水性苄-l -谷氨酸(Bzl-L-Glu),用于基因传递。采用开环聚合(ROP)法制备多肽,并对Boc-L-Lys侧链进行正交脱保护后,聚合物具有两亲性。为了结合或封装质粒DNA (pDNA),研究了不同的配方:纳米沉淀和乳液技术,使用各种有机溶剂以及水ph控制配方方法。通过动态光散射(DLS)监测复合物和纳米颗粒(NP)的形成,通过凝胶电泳和随后与肝素的控释显示pDNA的相互作用。进一步测试了多肽的细胞毒性和生物降解性。这些复合物和NPs在HEK293T细胞中的转染效率随后被评估为最有希望的大小分布和pDNA结合能力。L-Lys含量最高、疏水螺旋结构(P1*)比例最低的多肽水溶液转染效率最高,因此,该多肽是生物可降解基因传递载体高效基因传递的有希望的候选物。
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引用次数: 2
Immobilization of Partial Dislocations Bounding Double Shockley Stacking Faults in 4h-Sic Observed by in Situ Synchrotron X-Ray Topography 原位同步x射线形貌观察的4h-Sic双肖克利层错局部位错的固定化
Pub Date : 2021-10-01 DOI: 10.2139/ssrn.3844697
F. Fujie, S. Harada, H. Suo, B. Raghothamachar, M. Dudley, K. Hanada, H. Koizumi, Tomohisa Kato, M. Tagawa, T. Ujihara
The expansion of double Shockley stacking faults (DSFs) in an n-type 4H-SiC substrate with a nitrogen concentration of 3.9×10 19 cm −3 was investigated using in situ synchrotron X-ray topography. DSF expansion was observed to be suppressed and immobilized above 1590 K, along with the partial dislocation (PD) shape being changed from a straight to zig-zag configuration. For a different heating process (higher heating rate), the PDs could continue to expand, even above 1590 K. Ex situ topography experiments revealed that the DSFs close to the specimen surface expanded widely, although those expanding toward the specimen interior became immobile. One possible mechanism for this immobilization was proposed, where the core structural changes from a Si-core to the C-core by climb motion induced by the interaction between the PDs and point defects (C interstitials).
利用原位同步x射线形貌研究了氮浓度为3.9×10 19 cm−3的n型4H-SiC衬底中双肖克利层错(DSFs)的扩展。在1590 K以上,DSF的膨胀被抑制和固定,部分位错(PD)的形状由直形变为锯齿形。对于不同的加热过程(更高的加热速率),pd可以继续膨胀,甚至超过1590k。离地形貌实验表明,靠近试样表面的dsf扩展广泛,而向试样内部扩展的dsf则不动。提出了这种固定的一种可能机制,其中核心结构由pd和点缺陷(C间隙)之间的相互作用引起的爬升运动从si核心转变为C核心。
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引用次数: 1
Oxidation-Induced Rhenium Evaporation in Ni-Based Single Crystal Superalloy Thin Lamella ni基单晶高温合金薄片氧化诱导铼蒸发
Pub Date : 2021-10-01 DOI: 10.2139/ssrn.3860380
Yanhui Chen, Wenhan H. Zhang, Y. Zhao, Yadi Zhai, Bin Zhang, Hui Lu, Guo Yang, Luyan Yang, Ang Li
Abstract Rhenium is the key element for improving the mechanical properties in γ/γ' structure single-crystal Ni-based superalloys, but its oxidation-induced evaporation results in a detrimental decrease in corrosion resistance. The in situ Re evaporation process of a single lamella of a high Re-containing Ni-based superalloy is recorded in an environmental transmission electron microscope. The local aggregation of Re in the inner border of the γ phase and subsequent evaporation forms channels for the accelerated oxidation of the base and other elements. The real oxidation process of Re evaporation provides detailed and essential information on corrosive gas resistance properties at the nanoscale.
摘要铼是提高γ/γ′结构单晶镍基高温合金力学性能的关键元素,但铼的氧化诱发蒸发导致合金的耐蚀性下降。用环境透射电镜记录了高含Re镍基高温合金单片层的原位Re蒸发过程。Re在γ相内边界的局部聚集和随后的蒸发形成了碱和其他元素加速氧化的通道。Re蒸发的真实氧化过程提供了纳米级耐腐蚀性气体性能的详细和必要信息。
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引用次数: 6
Critical Growth and Energy Barriers of Atomic-Scale Plastic Flow Units in Metallic Glasses 金属玻璃中原子尺度塑性流动单元的临界生长和能量势垒
Pub Date : 2021-09-01 DOI: 10.2139/ssrn.3831586
Jihao Yu, Lai-Quan Shen, D. Şopu, B. Sun, W.H. Wang
Abstract We provide an intuitive interpretation for critical growth of an atomic-scale plastic flow unit in metallic glasses through energy conversion approach. An explicit expressions for the critical stress upon which the plastic flow unit can grow spontaneously is obtained. The growth of the atomic units is an competition process between the intrinsic configurational entropy change and the constraint effect of glassy matrix on the inelastic deformation of plastic flow unit. Our analysis shows that at the yielding point, the activation of a plastic flow unit should take the easiest path in the potential energy landscape. In this case, the change of the intrinsic configurational entropy and the elastic constraint effect contribute equally to the activation energy barrier for the plastic flow unit. Our results provide quantificational insights on the microscopic origin of the plastic yielding of glassy solids.
摘要本文通过能量转换的方法,直观地解释了金属玻璃中原子尺度塑性流动单元的临界生长。得到了塑性流动单元能够自发生长的临界应力的显式表达式。原子单元的生长是本征构型熵变化与玻璃基体对塑性流动单元非弹性变形的约束作用之间的竞争过程。我们的分析表明,在屈服点,塑性流动单元的激活应该采取势能景观中最简单的路径。在这种情况下,本征构型熵的变化和弹性约束效应对塑性流动单元的活化能势垒的贡献是相等的。我们的结果为玻璃状固体塑性屈服的微观起源提供了定量的见解。
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引用次数: 3
Spotlight on the Protein Corona of Liposomes 脂质体蛋白冠的研究进展
Pub Date : 2021-08-01 DOI: 10.2139/ssrn.3831024
N. Onishchenko, D. Tretiakova, E. Vodovozova
Although an established drug delivery platform, liposomes have not fulfilled their true potential. In the body, interactions of liposomes are mediated by the layer of plasma proteins adsorbed on the surface, the protein corona. The review aims to collect the data of the last decade on liposome protein corona, tracing the path from interactions of individual proteins to the effects mediated by the protein corona in vivo. It offers a classification of the approaches to exploitation of the protein corona-rather than elimination thereof-based on the bilayer composition-corona composition-molecular interactions-biological performance framework. The multitude of factors that affect each level of this relationship urge to the widest implementation of bioinformatics tools to predict the most effective liposome compositions relying on the data on protein corona. Supplementing the picture with new pieces of accurately reported experimental data will contribute to the accuracy and efficiency of the predictions.
虽然脂质体是一个成熟的药物传递平台,但它并没有发挥其真正的潜力。在体内,脂质体的相互作用是由吸附在表面的血浆蛋白层介导的,即蛋白冠层。本综述旨在收集近十年来脂质体蛋白冠的数据,追踪从单个蛋白的相互作用到体内蛋白冠介导的效应的路径。它提供了一种基于双层组成-电晕组成-分子相互作用-生物性能框架的蛋白质冠状蛋白开发方法的分类,而不是消除它们。影响这种关系的各个层面的众多因素促使生物信息学工具的最广泛实施,以预测最有效的脂质体组成依赖于蛋白质冠的数据。用新的准确报告的实验数据来补充这一图景,将有助于预测的准确性和效率。
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引用次数: 29
When is a Lattice Not a Lattice? The changing meaning of the term lattice in crystallography and physics 什么时候晶格不是晶格?晶格一词在晶体学和物理学中的变化意义
Pub Date : 2021-06-01 DOI: 10.2139/ssrn.3857643
R. Palgrave, E. Tobin
The concept of the lattice is central to the understanding of crystalline solids. However, usage of this word can very often differ between crystallographers, for whom a lattice is a mathematical object that describes the symmetry of a crystal, and physicists and chemists, for whom lattice is commonly used as a word for a regular array of particles. The similarity between the two definitions means they can easily be confused by students or inexperienced practitioners, but the fundamental differences can make the consequences of such confusion significant, an issue rarely tackled directly in popular textbooks. Here we examine the historical roots of this problem of context, and the changing understanding of the word ‘lattice’ over time. While the origins of the term lattice lie with the 19th century mathematical crystallographers, their usage, both in terms of the words used and their meanings, was fluid, and no strong distinction between the lattice and the physical components of a crystal was made. Leading crystallographers in the early 20th century regularly used the word lattice in a way that is unacceptable to some of their modern counterparts. We identify the decade after 1910 as the start of divergence between the physical and crystallographic meaning, catalysed by the discovery of X-ray diffraction and the development of lattice dynamics, although the current definitions did not become entrenched until the 1940s. While history has shown us that this classificatory issue is not just a matter of scientific disagreement and perhaps at its root is a disagreement in our understanding of classification itself. Lastly, we discuss possible resolutions to the matter.
晶格的概念是理解结晶固体的核心。然而,在晶体学家和物理学家和化学家之间,这个词的用法经常不同,对他们来说,晶格是描述晶体对称性的数学对象,对他们来说,晶格通常被用作粒子的规则阵列。这两个定义之间的相似性意味着它们很容易被学生或没有经验的从业者混淆,但根本的差异会使这种混淆的后果变得严重,这是一个在流行教科书中很少直接解决的问题。在这里,我们研究了这个上下文问题的历史根源,以及随着时间的推移,对“格”这个词的理解发生了变化。虽然晶格一词起源于19世纪的数学晶体学家,但其用法,无论是所用的词还是其含义,都是不确定的,并且没有明确区分晶格和晶体的物理组成部分。20世纪早期的主要晶体学家经常使用晶格这个词,这是他们现代同行无法接受的。我们认为1910年之后的十年是物理和晶体学意义分歧的开始,这是由x射线衍射的发现和晶格动力学的发展所催化的,尽管目前的定义直到20世纪40年代才确立。虽然历史告诉我们,这个分类问题不仅仅是科学分歧的问题,也许其根源在于我们对分类本身的理解存在分歧。最后,我们讨论了解决这个问题的可能办法。
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引用次数: 0
Covalent Stabilization of Antibody Recruitment Enhances Immune Recognition of Cancer Targets 抗体募集的共价稳定增强了癌症靶点的免疫识别
Pub Date : 2021-04-30 DOI: 10.2139/ssrn.3773889
Eden Kapcan, Benjamin P M Lake, Zi Yang, A. Zhang, Matthew S. Miller, A. Rullo
Antibody recruiting molecules (ARMs) represent an important class of "proximity-inducing" chemical tools with therapeutic potential. ARMs function by simultaneously binding to a hapten-specific serum antibody (Ab) (e.g., anti-dinitrophenyl (DNP)) and a cancer cell surface protein, enforcing their proximity. ARM anticancer efficacy depends on the formation of ARM:Ab complexes on the cancer cell surface, which activate immune cell recognition and elimination of the cancer cell. Problematically, ARM function in human patients may be limited by conditions that drive the dissociation of ARM:Ab complexes, namely, intrinsically low binding affinity and/or low concentrations of anti-hapten antibodies in human serum. To address this potential limitation, we previously developed a covalent ARM (cARM) chemical tool that eliminates the ARM:antibody equilibrium through a covalent linkage. In the current study, we set out to determine to what extent maximizing the stability of ARM:antibody complexes via cARMs enhances target immune recognition. We observe cARMs significantly increase target immune recognition relative to ARMs across a range of therapeutically relevant antibody concentrations. These results demonstrate that ARM therapeutic function can be dramatically enhanced by increasing the kinetic stability of ARM:antibody complexes localized on cancer cells. Our findings suggest that a) high titres/concentrations of target antibody in human serum are not neccessary and b) saturative antibody recruitment to cancer cells not sufficient, to achieve maximal ARM therapeutic function.
抗体招募分子(ARMs)是一类重要的具有治疗潜力的“接近诱导”化学工具。arm通过同时结合半抗原特异性血清抗体(Ab)(例如,抗二硝基苯(DNP))和癌细胞表面蛋白来发挥作用,从而加强它们的接近性。ARM的抗癌功效取决于在癌细胞表面形成ARM:Ab复合物,激活免疫细胞识别并消除癌细胞。问题是,人类患者的ARM功能可能受到驱动ARM:Ab复合物解离的条件的限制,即人类血清中固有的低结合亲和力和/或低浓度的抗半抗原抗体。为了解决这一潜在的限制,我们之前开发了一种共价ARM (cARM)化学工具,通过共价链接消除ARM:抗体平衡。在目前的研究中,我们着手确定在多大程度上最大化ARM的稳定性:抗体复合物通过carm增强目标免疫识别。我们观察到,在一系列治疗相关的抗体浓度范围内,相对于ARMs, carm显著增加了靶免疫识别。这些结果表明,通过增加定位于癌细胞上的ARM:抗体复合物的动力学稳定性,可以显著增强ARM的治疗功能。我们的研究结果表明,a)人类血清中不需要高滴度/高浓度的目标抗体,b)饱和抗体募集癌细胞不够,以实现最大的ARM治疗功能。
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引用次数: 8
Characterization of an Al-Cu-Mg-Zn Multi Principal Element Alloy by Experimental and Computational Screening Methods Al-Cu-Mg-Zn多主元素合金的实验和计算筛选表征
Pub Date : 2021-04-21 DOI: 10.2139/ssrn.3830978
J. Kirschner, W. Mayr-Schmölzer, J. Bernardi, Robert Gaschl, S. Schwarz, C. Simson, G. Vonbun-Feldbauer, C. Eisenmenger-Sittner
We present a combined experimental and computational investigation of phase stability and mechanical properties in the Al-Cu-Mg-Zn quaternary system. Samples containing different relative compositions were prepared using magnetron sputtering and investigated by electron microscopic and X-ray based methods. To classify the technical relevance of the samples, the indentation hardness was measured.  The phase stability was studied computationally using a cluster expansion approach based on density functional theory (DFT) methods to allow for a comprehensive screening of the configuration space. Upon decreasing Cu concentration, a transition from an fcc to a mixed fcc/bcc crystal system and significant changes in the mechanical properties depending on Valence Electron Concentration (VEC) and atomic size differences (δr) was observed experimentally. The corresponding crystallographic phases were assigned by XRD and the experimentally observed phase transition could be confirmed by computing formation energies for the corresponding  ground-state structures. Since to date, quaternary complex light metal alloy systems cannot be reliably predicted, this is an important step towards a priori modelling of this class of materials.
我们提出了Al-Cu-Mg-Zn四元体系相稳定性和力学性能的实验和计算相结合的研究。采用磁控溅射法制备了不同相对成分的样品,并用电镜和x射线对样品进行了研究。为了对样品的技术相关性进行分类,测量了压痕硬度。采用基于密度泛函理论(DFT)方法的聚类展开方法对相稳定性进行了计算研究,以便对构型空间进行全面筛选。当Cu浓度降低时,实验观察到从fcc到混合fcc/bcc晶体体系的转变,并观察到力学性能随价电子浓度(VEC)和原子尺寸差异(δr)的显著变化。通过XRD确定了相应的晶体相,并通过计算相应基态结构的形成能来证实实验观察到的相变。由于到目前为止,四元复杂轻金属合金系统还不能可靠地预测,这是向这类材料的先验建模迈出的重要一步。
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引用次数: 2
Surface Tension of Aluminum Oxide: A Molecular Dynamics Study 氧化铝表面张力的分子动力学研究
Pub Date : 2021-04-16 DOI: 10.2139/ssrn.3828267
Ensieh Yousefi, Youqing Sun, Anil Kunwar, M. Guo, N. Moelans, D. Seveno
Despite the fact that aluminum is one of the most commonly-used elements, experimental results on the value of its surface tension are largely scattered due to the high sensitivity of aluminum to the atmospheric conditions, leading to huge experimental challenges. In this study, the surface tension of pure Al and Al-O systems was studied in detail using Molecular Dynamics (MD) simulations. A force field that includes embedded atoms method and charge transfer ionic potential was applied to account for interatomic interactions. Simulations were performed at different temperatures (1000-2200 K) with different initial oxygen contents. The simulations allowed us to elucidate the effects of well-controlled atmospheric conditions on surface tension. Our results show that the surface tension of aluminum is sensitive to the amount of oxygen content at the surface, which depends on the total oxygen content and the temperature. At different temperatures, different amounts of oxygen atoms are needed to saturate the aluminum surface ( XSAT0 ). A relationship between XSAT0 and temperature was derived. Due to the scattered data in the literature, a new experiment was performed to measure the surface tension of pure aluminum at two different temperatures. Our MD simulations show a good agreement with these experimental results. We believe that this study can shed light on the underlying mechanisms controlling surface tension of aluminum and could offer routes to better engineer the surface properties of this liquid metal.
尽管铝是最常用的元素之一,但由于铝对大气条件的高度敏感性,其表面张力值的实验结果在很大程度上是分散的,这给实验带来了巨大的挑战。本研究采用分子动力学方法对纯Al和Al- o体系的表面张力进行了详细的研究。应用嵌入原子法和电荷转移离子势的力场来解释原子间的相互作用。在不同温度(1000 ~ 2200 K)和不同初始氧含量下进行了模拟。模拟使我们能够阐明良好控制的大气条件对表面张力的影响。结果表明,铝的表面张力对表面氧含量敏感,这取决于总氧含量和温度。在不同的温度下,需要不同数量的氧原子来使铝表面饱和(XSAT0)。导出了XSAT0与温度的关系。由于文献中数据的分散,我们进行了一项新的实验来测量纯铝在两种不同温度下的表面张力。模拟结果与实验结果吻合较好。我们相信这项研究可以揭示控制铝表面张力的潜在机制,并为更好地设计这种液态金属的表面特性提供途径。
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引用次数: 1
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