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A review of lobomycosis and lobomycosis-like skin disease in cetaceans worldwide, with new data from the Gulf of Guayaquil, Ecuador. 回顾全球鲸目动物的龙霉菌病和龙霉菌病样皮肤病,以及厄瓜多尔瓜亚基尔湾的新数据。
IF 2.7 3区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-06 DOI: 10.1093/mmy/myae089
Marie-Françoise Van Bressem, Fernando Félix, Koen Van Waerebeek

Lobomycosis, also called paracoccidioidomycosis ceti, is a chronic mycotic cutaneous disease affecting odontocetes. Lobomycosis-like disease (LLD) has a clinical presentation consistent with lobomycosis but lacks a histological and molecular diagnosis. We review the literature on lobomycosis aetiology, clinical signs and pathogenesis, species affected and geographic distribution and examine the factors influencing the presence, transmission and prevalence of the disease, to better understand its ecology. In addition, we provide unpublished information on LLD in two common bottlenose dolphin (Tursiops truncatus) communities inhabiting the Gulf of Guayaquil, Ecuador. Lobomycosis and LLD occur in Delphinidae from the Atlantic, Pacific, and Indian Oceans between 33°N and 35°S. Primary risk factors include habitat, sex, age, sociality, and pollution. In dolphins from the Americas and Japan, lobomycosis is caused by Paracoccidioides ceti, family Ajellomycetaceae. The disease is characterized by cutaneous granulomatous lesions that may occur anywhere on the body, grow to large size, and may ulcerate. Histologically, the lesions consist of acanthosis and histiocytic granulomas between the skin and subcutaneous tissues, with inflammatory changes that extend deep into the dermis. Multiple yeast cells with a double refringent layer stained positive using Gomori-Grocott methenamine silver in the dermis of a T. truncatus from Ecuador diagnosed with LLD since 2011, a first record for the Southeast Pacific. Injuries may enable the entry of P. ceti into the dermis while skin contact likely favours transmission, putting males at higher risk than females. Lobomycosis and LLD may have a negative impact on small communities already threatened by anthropogenic factors.

龙线虫病又称副球孢子菌病,是一种影响齿鲸的慢性皮肤真菌病。龙线虫病样病(LLD)的临床表现与龙线虫病一致,但缺乏组织学和分子诊断。我们回顾了有关龙柏霉菌病的病因、临床症状和发病机制、受影响的物种和地理分布的文献,并研究了影响该病的存在、传播和流行的因素,以便更好地了解其生态学。此外,我们还提供了在厄瓜多尔瓜亚基尔湾栖息的两个普通瓶鼻海豚(Tursiops truncatus)群落中未发表的关于龙线虫病的信息。龙线虫病和LLD发生在北纬33°至南纬35°之间的大西洋、太平洋和印度洋的海豚科动物中。主要风险因素包括栖息地、性别、年龄、社会性和污染。在美洲和日本的海豚中,龙线虫病是由 Ajellomycetaceae 的 Paracoccidioides ceti 引起的。该病的特征是皮肤肉芽肿性病变,可发生在身体的任何部位,病变面积大,可能会溃疡。从组织学角度看,病变由皮肤和皮下组织之间的棘层增生和组织细胞肉芽肿组成,炎症变化深入真皮层。自 2011 年以来,厄瓜多尔的一只 T. truncatus 被诊断为 LLD,其真皮层中的多个酵母细胞具有双折射层,使用 Gomori-Grocott 甲氰胺银染色呈阳性,这在东南太平洋地区尚属首次。受伤可能会使 P. ceti 进入真皮层,而皮肤接触则可能有利于传播,因此雄性比雌性的风险更高。龙线虫病和 LLD 可能会对已经受到人为因素威胁的小社区造成负面影响。
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引用次数: 0
The significance of low titer serum cryptococcal antigen testing from 2017 to 2023 performed in a tertiary care center. 2017 年至 2023 年在三级医疗中心进行的低滴度血清隐球菌抗原检测的意义。
IF 2.7 3区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-06 DOI: 10.1093/mmy/myae093
Thein Myint, Jenna R Wilson, Mahesh Bhatt, Mark E Irwin, Julie A Ribes

Several false positive low serum cryptococcal antigen (SCrAg) reports by lateral flow assay (LFA) were identified in late 2016 at our tertiary care hospital. After the recall and correction of the problem in the reagent, we studied the significance of SCrAg LFA ≤ 1:10 from January 2017 to October 2023. Of 20 patients with 31 samples of SCrAg LFA ≤ 1:10, 14 patients (70%) were classified as true positives, four (20%) were indeterminate, and only two (10%) patients were false positives. If a new SCrAg LFA ≤ 1:10 is detected, it should be repeated, and additional workup should be pursued.

2016年末,我们所在的三级甲等医院发现了几例血清隐球菌抗原(SCrAg)侧流测定法(LFA)的低血清隐球菌抗原(SCrAg)假阳性报告。在召回并纠正试剂中的问题后,我们研究了 2017 年 1 月至 2023 年 10 月期间 SCrAg LFA ≤ 1:10 的意义。在20名患者的31份SCrAg LFA≤1:10的样本中,14名患者(70%)被归类为真阳性,4名患者(20%)为不确定,只有2名患者(10%)为假阳性。如果检测到新的 SCrAg LFA ≤1:10,则应重复检测,并继续进行其他检查。
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引用次数: 0
Candida auris: Understanding the dynamics of C. auris infection versus colonization. 念珠菌:了解念珠菌感染与定植的动态变化。
IF 2.7 3区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-06 DOI: 10.1093/mmy/myae086
Sungsoo Park, Heesuk Kim, Duckjin Hong, Hyeyoung Oh

Candida auris is a pathogen of growing public health concern worldwide. However, risk factors contributing to C. auris infection in patients colonized with C. auris remain unclear. Understanding these risk factors is crucial to prevent colonization-to-infection transition and devise effective preventive strategies. This study aimed to investigate risk factors associated with C. auris infection compared to colonization. The study included 97 patients who acquired laboratory-confirmed C. auris in either matrix-assisted laser desorption/ionization-time of flight (MALDI-TOF) mass spectrometry or VITEK 2 system from October 2019 to June 2023. Baseline demographics and known risk factors associated with C. auris infection were collected from electronic medical records. The infection group had C. auris from a sterile site or non-sterile site with evidence of infection. The colonization group was followed up for a median of 30 days for any signs of infection. Associations between relevant variables and C. auris infection were assessed using multivariable logistic regression. The infection group (n = 31) was more likely to be bedbound, with longer hospital stays and more arterial catheters. Chronic kidney disease (odds ratio [OR] 45.070), carriage of multidrug-resistant organisms (OR 64.612), and vasopressor use for > 20 days (OR 68.994) were associated with C. auris infection, after adjusting for sex, age, and prior colonization with C. auris. Chronic kidney disease, carriage of multidrug-resistant organisms, and prolonged vasopressor use emerged as significant risk factors for C. auris infection compared to colonization. They could be used to predict C. auris infection early in patients colonized with C. auris.

念珠菌是一种病原体,在全球范围内引起了越来越多的公共卫生关注。然而,导致定植有念珠菌的患者感染念珠菌的风险因素仍不清楚。了解这些风险因素对于防止从定植到感染的转变并制定有效的预防策略至关重要。本研究旨在调查与定植相关的感染 C. auris 的风险因素。研究纳入了2019年10月至2023年6月期间在基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF)或VITEK 2系统中获得实验室确诊的阿留申病菌的97名患者。从电子病历中收集了基线人口统计学数据和与阿氏杆菌感染相关的已知风险因素。感染组从无菌部位或有感染证据的非无菌部位感染 C. auris。对定植组进行了中位 30 天的随访,以观察是否有感染迹象。采用多变量逻辑回归评估相关变量与 C. auris 感染之间的关系。感染组(31 人)更有可能卧床不起,住院时间更长,动脉导管更多。在对性别、年龄和之前的阿氏杆菌定植情况进行调整后,慢性肾病(几率比 [OR] 45.070)、携带耐多药病原体(OR 64.612)和使用血管加压器超过 20 天(OR 68.994)与阿氏杆菌感染有关。与定植相比,慢性肾病、携带耐多药生物体和长期使用血管加压器成为感染法氏囊病的重要风险因素。这些因素可用于早期预测定植有法氏囊菌的患者感染法氏囊菌。
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引用次数: 0
Molecular analysis of cutaneous yeast isolates in the mycobiota of children with atopic dermatitis. 特应性皮炎患儿真菌生物群中皮肤酵母分离物的分子分析。
IF 2.7 3区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-06 DOI: 10.1093/mmy/myae090
Iwyna França Souza Gomes Vial, Morgana Ferreira Voidaleski, Rosângela Ferreira Lameira, Flavia de Fatima Costa, Danielle Arake Zanatta, Vania Aparecida Vicente, Vania Oliveira de Carvalho

The skin of patients with atopic dermatitis (AD) has a greater diversity of mycobiota. An observational, prospective, cross-sectional, analytical, and comparative study was conducted involving 80 patients with AD Group (ADG) and 50 individuals without AD (wADG) in a tertiary hospital in Brazil. Skin scale samples were collected from the frontal, cervical, fossae cubital, and popliteal regions and identified using molecular biology techniques. The results showed that 47.5% of ADG had identified yeasts compared to 0% of wADG (P < .001). The yeasts Rhodotorula mucilaginosa and Candida parapsilosis were the most abundant. The probability of colonization increased with age, showing values of 40% at 60 months and 80% at 220 months (P = .09). The cervical region (12.5%) was colonized to the greatest extent. Our findings revealed that positive mycology was not more probable when the scoring of atopic dermatitis or eczema area and severity index value increased (P = .23 and .53, respectively). The results showed that the sex, age, and different population types directly affected the composition of the mycobiota in the population analyzed. A higher frequency of colonization and greater diversity of yeast species were detected in the cutaneous mycobiota of children with AD.

特应性皮炎(AD)患者皮肤上的真菌生物群更加多样化。巴西一家三甲医院对 80 名特应性皮炎患者(ADG)和 50 名非特应性皮炎患者(wADG)进行了一项观察性、前瞻性、横断面分析和比较研究。研究人员从额头、颈部、肘窝和腘窝部位采集了皮肤鳞片样本,并使用分子生物学技术进行了鉴定。结果显示,47.5% 的 ADG 发现了酵母菌,而 0% 的 wADG 发现了酵母菌(p < 0.001)。酵母菌中以粘液酵母菌和副酵母菌最多。随着年龄的增长,定植的概率也在增加,60 个月时为 40%,220 个月时为 80%(p = 0.09)。宫颈部位(12.5%)的定植率最高。我们的研究结果表明,当 SCORAD 或 EASI 值增加时,霉菌学阳性的可能性并不大(p = 0.23 和 0.53)。结果表明,性别、年龄和不同的人群类型直接影响了所分析人群中霉菌生物群的组成。在AD患儿的皮肤真菌生物群中发现了更高的定植频率和更多的酵母菌种类。
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引用次数: 0
A global perspective of the changing epidemiology of invasive fungal disease and real-world experience with the use of isavuconazole. 从全球角度看侵袭性真菌病流行病学的变化以及使用异黄酮唑的实际经验。
IF 2.7 3区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-06 DOI: 10.1093/mmy/myae083
George R Thompson, Sharon C-A Chen, Wadha Ahmed Alfouzan, Koichi Izumikawa, Arnaldo L Colombo, Johan Maertens

Global epidemiological data show that the incidence of invasive fungal disease (IFD) has increased in recent decades, with the rising frequency of infections caused by Aspergillus and Mucorales order species. The number and variety of patients at risk of IFD has also expanded, owing in part to advances in the treatment of hematologic malignancies and other serious diseases, including hematopoietic stem cell transplantation (HCT) and other therapies causing immune suppression. Isavuconazonium sulfate (active moiety: isavuconazole) is an advanced-generation triazole antifungal approved for the treatment of invasive aspergillosis and mucormycosis that has demonstrated activity against a variety of yeasts, moulds, and dimorphic fungi. While real-world clinical experience with isavuconazole is sparse in some geographic regions, it has been shown to be effective and well tolerated in diverse patient populations, including those with multiple comorbidities who may have failed to respond to prior triazole antifungal therapy. Isavuconazole may be suitable for patients with IFD receiving concurrent QTc-prolonging therapy, as well as those on venetoclax or ruxolitinib. Data from clinical trials are not available to support the use of isavuconazole prophylactically for the prevention of IFD or for the treatment of endemic IFD, such as those caused by Histoplasma spp., but real-world evidence from case studies suggests that it has clinical utility in these settings. Isavuconazole is an option for patients at risk of IFD, particularly when the use of alternative antifungal therapies is not possible because of toxicities, pharmacokinetics, or drug interactions.

全球流行病学数据显示,近几十年来,侵袭性真菌病(IFD)的发病率有所上升,曲霉和粘菌目真菌感染的频率也在上升。部分由于血液恶性肿瘤和其他严重疾病治疗的进步,包括造血干细胞移植(HCT)和其他导致免疫抑制的疗法,面临 IFD 风险的患者人数和种类也在增加。硫酸异维菌素(活性分子:异维康唑)是一种高级三唑类抗真菌药,已被批准用于治疗侵袭性曲霉菌病和粘孢子菌病,对多种酵母菌、霉菌和二形真菌具有活性。虽然在某些地区,伊沙武康唑的实际临床经验并不丰富,但它已被证明对不同的患者群体有效且耐受性良好,其中包括那些患有多种并发症且对之前的三唑类抗真菌疗法无效的患者。伊沙夫康唑可能适用于同时接受QTc延长治疗的IFD患者,以及正在接受venetoclax或ruxolitinib治疗的患者。目前尚无临床试验数据支持将异康唑用于预防 IFD 或治疗地方性 IFD(如由组织胞浆菌属引起的 IFD),但病例研究的实际证据表明,异康唑在这些情况下具有临床实用性。对于有 IFD 风险的患者,尤其是在因毒性、药代动力学或药物相互作用而无法使用其他抗真菌疗法时,可以选择伊沙武康唑。
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引用次数: 0
Landscape of in situ cytokine expression, soluble C-type lectin receptors, and vitamin D in patients with recurrent vulvovaginal candidiasis. 复发性外阴阴道念珠菌病患者原位细胞因子表达、可溶性 C 型凝集素受体和维生素 D 的分布。
IF 2.7 3区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-06 DOI: 10.1093/mmy/myae091
Jeiser Marcelo Consuegra-Asprilla, Manuela Chaverra-Osorio, Brajhan Torres, Yuliana Cabrera-Chingal, Angelica Mancera-Mieles, Carolina Rodríguez-Echeverri, Beatriz L Gómez, Ángel González

The immunopathogenesis of recurrent vulvovaginal candidiasis (RVVC) is poorly understood. Recently, it was reported that patients with RVVC present a decrease in both the fungicidal capacity of neutrophils and the proliferative capability of peripheral blood mononuclear cells in response to Candida albicans infection, suggesting an alteration in the innate and adaptive immune response. The aim of this study was to determine the in-situ expression, in the vaginal mucosa, of genes associated with the immune response, as well as the serum concentrations of dectin-1, mannose-binding lectin (MBL), and vitamin D in patients with RVVC. A study was carried out on 40 patients with a diagnosis of RVVC and 26 healthy women. Vaginal scrapings were obtained, and the expression of genes that encode cytokines and transcription factors specific for Th1, Th2, Th17, Treg, pro-inflammatory profiles, and enzymes related to oxidative/microbicidal mechanisms was evaluated by quantitiative polymerase chain reaction (qPCR). Additionally, serum levels of vitamin D and the soluble receptors dectin-1 and MBL were determined by enzyme-linked immunosorbent assay (ELISA). In patients with RVVC, a decreased expression of T-bet, RORγ-T, IL-1β, and IL-17, and an increase in the expression of FOXP3, IL-4, IL-8, IL-10, and IL-18 were observed when compared to healthy women: moreover, decreased levels of MBL were also observed in these patients. These results confirm that patients with RVVC present in-situ alterations in both the specific and adaptive immune response against Candida spp., a fact that could be associated with the exaggerated vaginal inflammatory response.

人们对复发性外阴阴道念珠菌病(RVVC)的免疫发病机制知之甚少。最近有报道称,复发性外阴阴道念珠菌病(RVVC)患者的中性粒细胞杀真菌能力和外周血单核细胞对白色念珠菌感染的增殖能力均有所下降,这表明先天性和适应性免疫反应发生了改变。本研究的目的是确定阴道粘膜中与免疫反应相关的基因的原位表达,以及 RVVC 患者血清中脱酪素-1、甘露糖结合凝集素(MBL)和维生素 D 的浓度。研究对象为 40 名确诊为 RVVC 的患者和 26 名健康女性。研究人员采集了阴道刮片,并通过 qPCR 评估了编码 Th1、Th2、Th17、Treg 特异性细胞因子和转录因子的基因、促炎特征以及与氧化/杀微生物机制相关的酶的表达情况。此外,还通过酶联免疫吸附法测定了血清中维生素 D 和可溶性受体右旋糖酐-1(Dect-1)及甘露糖结合凝集素(MBL)的水平。与健康女性相比,在 RVVC 患者中观察到 T-bet、RORγ-T、IL-1β 和 IL-17 的表达降低,而 FOXP3、IL-4、IL-8、IL-10 和 IL-18 的表达升高:此外,在这些患者中还观察到 MBL 水平降低。这些结果证实,RVVC 患者针对念珠菌属的特异性和适应性免疫反应均发生了原位改变,这可能与阴道炎症反应的加剧有关。
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引用次数: 0
Molecular epidemiology and antifungal susceptibility of dermatophytes and Candida isolates in superficial fungal infections at a grade A tertiary hospital in Northern China. 华北某甲级三甲医院浅部真菌感染中皮真菌和念珠菌分离物的分子流行病学和抗真菌敏感性
IF 2.7 3区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-06 DOI: 10.1093/mmy/myae087
Ruijun Zhang, Ziping Song, Xiaorui Su, Ting Li, Juan Xu, Xiao He, Yuanwen Yang, Bingmei Chang, Yuying Kang

This study analyzed the prevalence and antifungal susceptibility of superficial fungal infections in 295 cases from 2019 to 2020 at a dermatology clinic. Dermatophytes were the predominant pathogens (69.5%), including Trichophytonrubrum, T. interdigitale, Microsporum canis, et al., followed by Candida spp. (29.5%), including Candidaalbicans, Ca. parapsilosis, and Ca. glabrata. The most common infections were onychomycosis (36.3%), tinea cruris (30.5%), and tinea corporis (18.6%). The distribution of SFI types showed variations based on gender, age, and season. Common antifungal agents, including terbinafine, voriconazole, ciclopiroxamine, amphotericin B, itraconazole, and ketoconazole have exhibited low minimum inhibitory concentrations against dermatophytes, especially terbinafine, which has been potent against superficial fungal infections caused by dermatophytes in the local area. Candida spp. strains were generally susceptible or classified as wild-type to 5-flucytosine and amphotericin B, with 92.0% being wild-type for itraconazole. However, resistance to fluconazole and voriconazole was observed in a small percentage of Ca. albicans and Ca. parapsilosis strains. The emergence of drug-resistant Candida underscores the importance of prudent antifungal use and continuous surveillance.

本研究分析了2019年至2020年一家皮肤科诊所295例浅表真菌感染的患病率和抗真菌敏感性。皮肤真菌是最主要的病原体(69.5%),包括红色毛癣菌(T. rubrum)、趾间毛癣菌、犬小孢子菌等,其次是白色念珠菌属(29.5%),包括白色念珠菌(C. albicans)、副丝状念珠菌(C. parapsilosis)和格拉布氏念珠菌(C. glabrata)。最常见的感染是甲癣(36.3%)、股癣(30.5%)和体癣(18.6%)。SFI类型的分布因性别、年龄和季节而异。特比萘芬、伏立康唑、环吡酮胺、两性霉素 B、伊曲康唑和酮康唑等常用抗真菌药物对皮癣菌的最低抑菌浓度(MIC)较低,尤其是特比萘芬,对本地皮癣菌引起的 SFI 有较强的抑制作用。念珠菌属菌株一般对 5-氟胞嘧啶和两性霉素 B 敏感或属于野生型,其中 92.0%对伊曲康唑属于野生型。不过,在一小部分白念珠菌和副丝状念珠菌中发现了对氟康唑和伏立康唑的耐药性。耐药性念珠菌的出现凸显了谨慎使用抗真菌药物和持续监控的重要性。
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引用次数: 0
Deciphering prognostic indicators in non-HIV cryptococcal meningitis: Constructing and validating a predictive Nomogram model. 解密非艾滋病毒隐球菌脑膜炎的预后指标:构建并验证预测性提名图模型
IF 2.7 3区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-06 DOI: 10.1093/mmy/myae092
Feng Liang, Runyang Li, Make Yao, Jing Wang, Yunhong Li, Lijian Lei, Junhong Guo, Xueli Chang

Cryptococcal meningitis (CM) is a well-recognized fungal infection, with substantial mortality in individuals infected with the human immunodeficiency virus (HIV). However, the incidence, risk factors, and outcomes in non-HIV adults remain poorly understood. This study aims to investigate the characteristics and prognostic indicators of CM in non-HIV adult patients, integrating a novel predictive model to guide clinical decision-making. A retrospective cohort of 64 non-HIV adult CM patients, including 51 patients from previous studies and 13 from the First Hospital of Shanxi Medical University, was analyzed. We assessed demographic features, underlying diseases, intracranial pressure, cerebrospinal fluid characteristics, and brain imaging. Using the least absolute shrinkage and selection operator (LASSO) method, and multivariate logistic regression, we identified significant variables and constructed a Nomogram prediction model. The model's calibration, discrimination, and clinical value were evaluated using the Bootstrap method, calibration curve, C index, goodness-of-fit test, receiver operating characteristic (ROC) analysis, and decision curve analysis. Age, brain imaging showing parenchymal involvement, meningeal and ventricular involvement, and previous use of immunosuppressive agents were identified as significant variables. The Nomogram prediction model displayed satisfactory performance with an akaike information criterion (AIC) value of 72.326, C index of 0.723 (0.592-0.854), and area under the curve (AUC) of 0.723, goodness-of-fit test P = 0.995. This study summarizes the clinical and imaging features of adult non-HIV CM and introduces a tailored Nomogram prediction model to aid in patient management. The identification of predictive factors and the development of the nomogram enhance our understanding and capacity to treat this patient population. The insights derived have potential clinical implications, contributing to personalized care and improved patient outcomes.

隐球菌脑膜炎(CM)是一种公认的真菌感染,在艾滋病毒感染者中死亡率很高。然而,人们对非 HIV 成人的发病率、风险因素和预后仍知之甚少。本研究旨在调查非 HIV 成年患者的 CM 特征和预后指标,并整合一个新的预测模型来指导临床决策。本研究对 64 例非 HIV 成年 CM 患者进行了回顾性队列分析,其中 51 例来自既往研究,13 例来自山西医科大学第一医院。我们评估了人口统计学特征、基础疾病、颅内压、脑脊液特征和脑成像。利用 LASSO 方法和多元逻辑回归,我们确定了重要的变量,并构建了一个 Nomogram 预测模型。我们使用 Bootstrap 方法、校准曲线、C 指数、拟合优度检验、ROC 分析和 DCA 分析对模型的校准、区分度和临床价值进行了评估。年龄、脑成像显示实质受累、脑膜和脑室受累以及既往使用过免疫抑制剂被确定为重要变量。Nomogram预测模型的性能令人满意,其AIC值为72.326,C指数为0.723(0.592-0.854),AUC为0.723,拟合优度检验P=0.995。本研究总结了成人非艾滋病毒 CM 的临床和影像学特征,并引入了量身定制的 Nomogram 预测模型,以帮助患者管理。预测因素的确定和提名图的开发增强了我们对这一患者群体的了解和治疗能力。所得出的见解具有潜在的临床意义,有助于个性化治疗和改善患者预后。
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引用次数: 0
Correction to: Comparison of Candida colonization in intensive care unit patients with and without COVID-19: First prospective cohort study from Turkey. 更正:有 COVID-19 和没有 COVID-19 的重症监护室患者念珠菌定植情况比较:土耳其首次前瞻性队列研究。
IF 2.7 3区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-08-02 DOI: 10.1093/mmy/myae078
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引用次数: 0
Molecular characterisation of Histoplasma capsulatum sensu lato from Ethiopian horses reveals two distinct phylogenetic clades. 埃塞俄比亚马的荚膜组织胞浆菌(Histoplasma capsulatum sensu lato)的分子特征揭示了两个不同的系统发育支系。
IF 2.7 3区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-08-02 DOI: 10.1093/mmy/myae079
Patrick C Y Woo, Fatma Al Mheiri, Jessika Cavalleri, Sunitha Joseph, James Y M Tang, Marina Joseph, Chi-Ching Tsang, Susanna K P Lau, Ulrich Wernery

Epizootic lymphangitis (EL) is a highly prevalent and contagious infectious disease affecting horses in many parts of Ethiopia caused by Histoplasma capsulatum sensu lato ('var. farciminosum'). In this study, 12 suspected isolates of H. capsulatum sensu lato or yeasts unidentified by conventional biochemical tests isolated from Ethiopian horses with EL were characterised by internal transcribed spacer sequencing. Six of the 12 isolates were identified to be members of H. capsulatum sensu lato and the other six were Pichia kudriavzevii (synonym: Candida krusei) (n = 3), Trichosporon asahii (n = 1), Geotrichum silvicola (n = 1) and Moesziomyces aphidis (n = 1), respectively. The six H. capsulatum sensu lato isolates were further characterised by multilocus sequence analysis. Four distinct gene loci (arf [462 bases], H-anti [410 bases], ole1 [338 bases] and tub1 [272 bases]) of these six isolates as well as those of two H. capsulatum sensu lato ('var. farciminosum') reference strains (ATCC 58332 and ATCC 28798) were polymerase chain reaction (PCR)-amplified and sequenced. Phylogenetic analyses of their concatenated nucleotide sequences showed that three of the isolates and the reference strain ATCC 58332 were identical and belonged to the Eurasia clade within Latin American (LAm) A (H. suramericanum), and those of the other three isolates and the reference strain ATCC 28798 were identical and belonged to the Africa clade. At least two distinct phylogenetic clades of H. capsulatum sensu lato were circulating in Ethiopian horses with EL. Advanced molecular technologies and bioinformatics tools are crucial for the accurate identification and typing of pathogens as well as the discovery of novel microorganisms in veterinary microbiology.

流行性淋巴管炎(Ellizootic lymphangitis,EL)是由荚膜组织胞浆菌(Histoplasma capsulatum sensu lato,"var. farciminosum")引起的一种影响埃塞俄比亚许多地区马匹的高发传染性传染病。在这项研究中,通过 ITS 测序,对从埃塞俄比亚马匹身上分离出的 12 株疑似荚膜组织胞浆菌(H. capsulatum sensu lato)或通过常规生化检验无法识别的酵母菌进行了鉴定。经鉴定,12个分离株中有6个属于广谱荚膜酵母菌,另外6个分别为Pichia kudriavzevii(同义词:Candida krusei)(n = 3)、Trichosporon asahii(n = 1)、Geotrichum silvicola(n = 1)和Moesziomyces aphidis(n = 1)。通过多焦点序列分析,进一步确定了这 6 个荚膜蘑菇属分离物的特征。对这六个分离株以及两个 H. capsulatum sensu lato("var. farciminosum")参考菌株(ATCC 58332 和 ATCC 28798)的四个不同基因位点[arf(462 个碱基)、H-anti(410 个碱基)、ole1(338 个碱基)和 tub1(272 个碱基)]进行了 PCR 扩增和测序。对其核苷酸序列的系统发育分析表明,其中三个分离株与参考菌株 ATCC 58332 相同,属于拉丁美洲(LAm)A(H. suramericanum)内的欧亚支系,另外三个分离株与参考菌株 ATCC 28798 相同,属于非洲支系。至少有两个不同的荚膜组织胞浆菌系统发育支系在患有EL的埃塞俄比亚马中流行。先进的分子技术和生物信息学工具对于兽医微生物学中病原体的准确鉴定和分型以及新型微生物的发现至关重要。
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Medical mycology
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