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Production and characterization of intersectional hybrids between Tricyrtis sect. Brachycyrtis and sect. Hirtae via ovule culture. 经胚珠培养的毛菖蒲节短菖蒲与毛菖蒲节交系杂交种的产生及性状研究。
IF 1.6 4区 生物学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2019-09-25 DOI: 10.5511/plantbiotechnology.19.0807a
Toshiya Inamura, Manami Nakazawa, Mitsuyo Ishibe, M. Otani, M. Nakano
The liliaceous perennial plants, Tricyrtis spp., have recently become popular as ornamental plants for pot and garden uses. In order to broaden the variability in plant form, flower form and flower color of Tricyrtis spp., intersectional hybridization was examined between four T. formosana cultivars or T. hirta var. albescens (sect. Hirtae) and T. macranthopsis (sect. Brachycyrtis). After cross-pollination, ovary enlargement was observed only when T. macranthopsis was used as a pollen parent. Ovules with placental tissues were excised from enlarged ovaries and cultured on half-strength MS medium without plant growth regulators. From five cross-combinations, 31 ovule culture-derived plantlets were obtained and 20 of them were confirmed to be intersectional hybrids by flow cytometry and inter-simple sequence repeat analyses. Almost all hybrids grew well and produced flowers 1-2 years after transplantation to the greenhouse. Hybrids had semi-cascade-type shoots, which was intermediate between T. formosana cultivars and T. hirta var. albescens (erect-type shoots) and T. macranthopsis (cascade-type shoots). They produced flowers with novel forms and colors compared with the corresponding parents, and some were horticulturally attractive. The results obtained in the present study indicate the validity of intersectional hybridization via ovule culture for breeding of Tricyrtis spp.
百合科多年生植物三叶草属(Tricyrtis spp.)最近作为观赏植物在盆栽和花园中很受欢迎。为了扩大三叶草在植物形态、花型和花色上的变异性,研究了四个台湾三叶草(T.formosana)品种或三叶草变种(T.hirta var.abscens)(sect.Hirtae)和大花三叶草(S.Brachycartis)之间的交叉杂交。在异花授粉后,只有当T.macranthopsis作为花粉亲本时,才能观察到卵巢增大。从增大的卵巢中切除带有胎盘组织的卵子,并在不含植物生长调节剂的半浓度MS培养基上培养。从5个杂交组合中获得31个胚珠培养基植株,其中20个经流式细胞术和简单序列间重复分析证实为杂交后代。几乎所有的杂交种在移植到温室后1-2年都生长良好并开花。杂交种具有半级联型芽,介于台湾木(T.formosana)栽培品种和阿氏毛茛(T.hirta var.abscens)(直立型芽)和麦氏毛莨菪(T.macranthopsis)(级联型芽)之间。与相应的亲本相比,它们开出了形态和颜色新颖的花,有些在园艺上很有吸引力。本研究结果表明,通过胚珠培养进行交叉杂交对三叶草育种是有效的。
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引用次数: 1
Characterization and fine mapping of nonstop glumes 2 (nsg2) mutant in rice (Oryza sativa L.). 水稻不间断颖花2 (nsg2)突变体的鉴定与精细定位。
IF 1.6 4区 生物学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2019-09-25 DOI: 10.5511/plantbiotechnology.19.0506a
Yunfeng Li, Xiao-Qin Zeng, Hui Zhuang, Huan Chen, Ting Zhang, Jun Zhang, Hao Zheng, Jun Tang, Hong-Lei Wang, Suxian Ren, Y. Ling, G. He
In cereal crops, the grain number per panicle and the grain yield are greatly affected by the number of florets in a spikelet. In wild-type rice, a spikelet only produces one fertile floret and beneath the floret are a pair of sterile lemmas and a pair of rudimentary glumes. This study characterized a rice spikelet mutant nonstop glumes 2 (nsg2). In the nsg2 mutant, both the sterile lemmas and rudimentary glumes were elongated, and part of sterile lemma looked like a lemma in appearance, shape and size. Detailed histological analysis and qPCR analysis revealed that the sterile lemmas in the nsg2 mutant had homeotically transformed into lemma-like organs. This phenotype indicates that NSG2 is involved in the regulation of spikelet development and supports the long-held view that sterile lemmas were derived from the lemmas of the two lateral florets. This implies that the rice spikelet has the potential to be restored to the "three florets spikelet", which may have existed in its ancestors. Genetic analysis reveals that the nsg2 trait is controlled by a single recessive gene. The NSG2 gene was finally mapped between markers R-20 and R-39 on chromosome 7 with a physical region of 180 kb. The two MYB family factors LOC_Os07g44030 and LOC_Os07g44090 might be involved in the development of the spikelet and floral organ, and they were considered as candidate genes of NSG2. These results provide a foundation for map-based cloning and function analysis of NSG2, as well as evidence to support "three-florets spikelet" breeding in rice.
在谷类作物中,小穗中的小花数量对每穗粒数和产量有很大影响。在野生型水稻中,一个小穗只产生一个可育的小花,在小花下面是一对不育的狐猴和一对不发育的颖片。本研究鉴定了一个水稻小穗突变不间断颖片2(nsg2)。在nsg2突变体中,不育外胚层和不发育的颖片都被拉长,部分不育外胚层在外观、形状和大小上看起来像外胚层。详细的组织学分析和qPCR分析显示,nsg2突变体中的不育lemma已同源转化为外膜样器官。这种表型表明NSG2参与小穗发育的调节,并支持长期以来的观点,即不育的狐猴来源于两个侧小花的狐猴。这意味着水稻小穗有可能恢复为“三小花小穗”,这可能存在于其祖先身上。遗传分析表明,nsg2性状受单隐性基因控制。NSG2基因最终定位在7号染色体上的R-20和R-39标记之间,物理区域为180 kb。两个MYB家族因子LOC_Os07g44030和LOC_Os7g44090可能参与小穗和花器官的发育,它们被认为是NSG2的候选基因。这些结果为NSG2的图谱克隆和功能分析提供了基础,也为水稻“三花小穗”育种提供了依据。
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引用次数: 1
Monitoring single-cell bioluminescence of Arabidopsis leaves to quantitatively evaluate the efficiency of a transiently introduced CRISPR/Cas9 system targeting the circadian clock gene ELF3. 监测拟南芥叶片的单细胞生物发光,定量评估瞬时引入的靶向生物钟基因ELF3的CRISPR/Cas9系统的效率。
IF 1.6 4区 生物学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2019-09-25 DOI: 10.5511/plantbiotechnology.19.0531a
Yuki Kanesaka, Masaaki Okada, S. Ito, T. Oyama
The rapid assessment of gene function is crucial in biological research. The CRISPR/Cas9 system is widely used as a tool for targeted gene editing in many organisms including plants. Previously, we established a transient gene expression system for investigating cellular circadian rhythms in duckweed. In this system, circadian reporters and clock gene effectors-such as overexpressors, RNA interference (RNAi), and CRISPR/Cas9-were introduced into duckweed cells using a particle bombardment method. In the present study, we applied the CRISPR/Cas9 system at a single cell level to Arabidopsis thaliana, a model organism in plant biology. To evaluate the mutation induction efficiency of the system, we monitored single-cell bioluminescence after application of the CRISPR/Cas9 system targeting the ELF3 gene, which is essential for robust circadian rhythmicity. We evaluated the mutation induction efficiency by determining the proportion of cells with impaired circadian rhythms. Three single guide RNAs (sgRNAs) were designed, and the proportion of arrhythmic cells following their use ranged from 32 to 91%. A comparison of the mutation induction efficiencies of diploid and tetraploid Arabidopsis suggested that endoreduplication had a slight effect on efficiency. Taken together, our results demonstrate that the transiently introduced CRISPR/Cas9 system is useful for rapidly assessing the physiological function of target genes in Arabidopsis cells.
基因功能的快速评估在生物学研究中至关重要。CRISPR/Cas9系统被广泛用作包括植物在内的许多生物体的靶向基因编辑工具。此前,我们建立了一个用于研究浮萍细胞昼夜节律的瞬时基因表达系统。在该系统中,使用粒子轰击方法将昼夜节律报告子和时钟基因效应子如过表达子、RNA干扰(RNAi)和CRISPR/Cas9引入浮萍细胞。在本研究中,我们在单细胞水平上将CRISPR/Cas9系统应用于植物生物学中的模式生物拟南芥。为了评估该系统的突变诱导效率,我们在应用靶向ELF3基因的CRISPR/Cas9系统后监测了单细胞生物发光,这对强大的昼夜节律性至关重要。我们通过测定昼夜节律受损的细胞比例来评估突变诱导效率。设计了三种单引导RNA(sgRNA),使用后心律失常细胞的比例在32%至91%之间。二倍体和四倍体拟南芥的诱变效率比较表明,内复制对诱变效率的影响很小。总之,我们的结果表明,瞬时引入的CRISPR/Cas9系统可用于快速评估拟南芥细胞中靶基因的生理功能。
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引用次数: 4
Measuring plant colors. 测量植物的颜色。
IF 1.6 4区 生物学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2019-06-25 DOI: 10.5511/PLANTBIOTECHNOLOGY.19.0322A
Ichiro Kasajima
Plant colors such as 'green leaf' and 'red apple' are often described based on human sense, even in scientific papers. On the other hand, colors are measured based on colorimetric principles in some papers, especially in the studies of horticultural plants. The science of color measurements ('colorimetry') is not included in any of the popular lectures in schools and universities, thus the principles of color measurements would not be understood by most researchers. The present review will overview the principles of colorimetry, and will introduce colorimetric methods which can be used for scientific measurement of plant colors. That is to say, the reflection spectrum of visible light (380-780 nm) is measured at 5-nm intervals on the surface of leaves or petals in 'Spectrometric Color Measurement' (SCM). The spectral data is multiplied with RGB or XYZ color matching functions and integrated to obtain RGB or XYZ intensities. Alternatively, approximate RGB values are directly obtained in 'Photographic Color Measurement' (PCM). RGB/XYZ intensities are further calculated to obtain 'hue', 'saturation', and 'lightness', the three factors of colors. Colorimetric insights into genetic regulations (such as MYB gene) and physiological regulations (such as alexandrite effect) of plant colors are also described.
植物的颜色,如“绿叶”和“红苹果”,通常是基于人类的感觉来描述的,甚至在科学论文中也是如此。另一方面,在一些论文中,特别是在园艺植物的研究中,颜色是基于比色原理测量的。颜色测量学(“色度学”)没有被包括在学校和大学的任何流行讲座中,因此大多数研究人员不会理解颜色测量的原理。本综述将概述比色法的原理,并介绍可用于科学测量植物颜色的比色法。也就是说,可见光的反射光谱(380-780 nm)在“光谱颜色测量”(SCM)中以5-nm的间隔在叶片或花瓣表面上测量。将光谱数据与RGB或XYZ颜色匹配函数相乘并进行积分以获得RGB或XYZ强度。或者,在“摄影色彩测量”(PCM)中直接获得近似RGB值。RGB/XYZ强度被进一步计算以获得“色调”、“饱和度”和“亮度”这三个颜色因素。还描述了对植物颜色的遗传调控(如MYB基因)和生理调控(如亚历山大石效应)的比色学见解。
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引用次数: 13
Involvement of the membrane-localized ubiquitin ligase ATL8 in sugar starvation response in Arabidopsis. 膜定位泛素连接酶ATL8参与拟南芥糖饥饿反应。
IF 1.6 4区 生物学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2019-06-25 DOI: 10.5511/PLANTBIOTECHNOLOGY.19.0328A
Yongming Luo, Shoki Aoyama, Y. Fukao, Y. Chiba, Takeo Sato, J. Yamaguchi
As major components of the ubiquitin system, ubiquitin ligases mediate the transfer of ubiquitin to specific target substrates, thereby playing important roles in regulating a wide range of cellular processes. The Arabidopsis Tóxicos en Levadura (ATL) family is a group of plant-specific RING-type ubiquitin ligases with N-terminal transmembrane-like domains. To date, 91 ATL isoforms have been identified in the Arabidopsis genome, with some reported to regulate plant responses to environmental stresses. However, the functions of most ATLs remain unclear. This study showed that ATL8 is a sugar starvation response gene and that ATL8 expression was significantly increased by sugar starvation conditions but repressed by exogenous sugar supply. The ATL8 protein was found to possess ubiquitin ligase activity in vitro and to localize to membrane-bound compartments in plant cells. In addition, Starch Synthase 4 was identified as a putative interactor with ATL8, suggesting that ATL8 may be involved in modulating starch accumulation in response to sugar availability. These findings suggest that ATL8 functions as a membrane-localized ubiquitin ligase likely to be involved in the adaptation of Arabidopsis plants to sugar starvation stress.
作为泛素系统的主要组成部分,泛素连接酶介导泛素向特定靶底物的转移,从而在调节广泛的细胞过程中发挥重要作用。拟南芥Tóxicos en Levadura(ATL)家族是一组具有N-末端跨膜样结构域的植物特异性RING型泛素连接酶。到目前为止,在拟南芥基因组中已经鉴定出91种ATL异构体,其中一些被报道可以调节植物对环境胁迫的反应。然而,大多数ATL的功能仍不清楚。本研究表明ATL8是一个糖饥饿反应基因,ATL8的表达在糖饥饿条件下显著增加,但受到外源糖供应的抑制。ATL8蛋白在体外具有泛素连接酶活性,并定位于植物细胞中的膜结合区。此外,淀粉合成酶4被鉴定为与ATL8的假定相互作用因子,表明ATL8可能参与调节淀粉积累以响应糖的可用性。这些发现表明,ATL8作为一种膜定位的泛素连接酶发挥作用,可能参与拟南芥植物对糖饥饿胁迫的适应。
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引用次数: 5
Agroinfiltration-based efficient transient protein expression in leguminous plants. 豆科植物中基于农业浸润的瞬时蛋白高效表达。
IF 1.6 4区 生物学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2019-06-25 DOI: 10.5511/PLANTBIOTECHNOLOGY.19.0220B
Takuya Suzaki, Mai Tsuda, H. Ezura, B. Day, K. Miura
Transient protein expression is an effective tool to rapidly unravel novel gene functions, such as transcriptional activity of promoters and sub-cellular localization of proteins. However, transient expression is not applicable to some species and varieties because of insufficient expression levels. We recently developed one of the strongest agroinfiltration-based transient protein expression systems for plant cells, termed 'Tsukuba system.' About 4 mg/g fresh weight of protein expression in Nicotiana benthamiana was obtained using this system. The vector pBYR2HS, which contains a geminiviral replication system and a double terminator, can be used in various plant species and varieties, including lettuces, eggplants, tomatoes, hot peppers, and orchids. In this study, we assessed the applicability of the Tsukuba system to several species of legumes, including Lotus japonicus, soybean Glycine max, and common bean Phaseolus vulgaris. The GFP protein was transiently expressed in the seedpods of all examined legume species, however, protein expression in leaves was observed only in P. vulgaris. Taken together, our system is an effective tool to examine gene function rapidly in several legume species based on transient protein expression.
瞬时蛋白表达是快速揭示新基因功能的有效工具,如启动子的转录活性和蛋白质的亚细胞定位。然而,由于某些物种和品种的表达水平不足,瞬时表达并不适用。我们最近开发了一种最强大的基于农业浸润的植物细胞瞬时蛋白表达系统,称为“筑波系统”。本烟中蛋白表达量约为4 mg/g。载体pBYR2HS包含双病毒复制系统和双终止子,可用于各种植物物种和品种,包括生菜、茄子、西红柿、辣椒和兰花。在本研究中,我们评估了筑波系统对几种豆科植物的适用性,包括日本莲子、大豆甘氨酸和普通豆菜豆。GFP蛋白在所有豆科植物的种子中均有短暂表达,而在豆科植物叶片中均有表达。综上所述,我们的系统是一种基于瞬时蛋白表达快速检测几种豆科植物基因功能的有效工具。
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引用次数: 17
Monitoring autophagy in rice tapetal cells during pollen maturation. 在花粉成熟过程中监测水稻绒毡层细胞的自噬。
IF 1.6 4区 生物学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2019-06-25 DOI: 10.5511/PLANTBIOTECHNOLOGY.19.0417A
Shigeru Hanamata, Jumpei Sawada, B. Toh, Seijiro Ono, K. Ogawa, Togo Fukunaga, K. Nonomura, Takamitsu Kurusu, K. Kuchitsu
We have previously shown that autophagy is required for post meiotic anther development including programmed cell death-mediated degradation of the tapetum and pollen maturation in rice. However, the spatiotemporal dynamics of autophagy in the tapetum remain poorly understood. We here established an in vivo imaging technique to analyze the dynamics of autophagy in rice tapetum cells by expressing green fluorescent protein-tagged AtATG8, a marker for autophagosomes. 3D-imaging analysis revealed that the number of autophagosomes/autophagy-related structures is extremely low at the tetrad stage (stage 8), and autophagy is dramatically induced at the uninucleate stages (stage 9-10) throughout the tapetal cells during anther development. The present monitoring system for autophagy offers a powerful tool to analyze the regulation of autophagy in rice tapetal cells during pollen maturation.
我们之前已经表明,水稻减数分裂后花药发育需要自噬,包括程序性细胞死亡介导的绒毡层降解和花粉成熟。然而,对绒毡层中自噬的时空动力学仍知之甚少。我们在此建立了一种体内成像技术,通过表达绿色荧光蛋白标记的AtATG8(一种自噬体的标记物)来分析水稻绒毡层细胞的自噬动力学。3D成像分析显示,自噬体/自噬相关结构的数量在四分体阶段(第8阶段)极低,并且在花药发育过程中,整个绒毡层细胞在单核阶段(第9-10阶段)显著诱导自噬。目前的自噬监测系统为分析花粉成熟过程中水稻绒毡层细胞的自噬调控提供了一个强大的工具。
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引用次数: 9
Micropropagation of Solanum quitoense var. quitoense by apical bud, petiole and hypocotyl culture. 利用顶芽、叶柄和下胚轴培养进行茄属植物的微繁殖。
IF 1.6 4区 生物学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2019-06-25 DOI: 10.5511/PLANTBIOTECHNOLOGY.19.0317A
B. Gutiérrez, M. M. Cobo, M. Orellana, J. Vega, V. Arahana, Viviana Jaramillo, M. Torres
The development of in vitro propagation methods can improve the current commercial use and conservation of plants like naranjilla (Solanum quitoense), a distinctive Andean crop and key emerging agricultural product. In the present study, we report in vitro culture protocols for naranjilla apical buds, hypocotyls and petioles. In apical bud culture, MS medium supplemented with 0.10 mg l-1 1-naphtaleneacetic acid (NAA) produced longer plantlets with greater number of leaves. Hypocotyl culture yielded higher number of shoots when using older explants in MS medium supplemented with different combinations of NAA, 6-benzylaminopurine (BAP) and gibberellic acid (GA3). Petiole culture produced a significantly higher number of shoots per explant, with more abundant and bigger leaves, when using MS medium supplemented with 0.02 mg l-1 NAA, 4.50 mg l-1 BAP and 1.00 mg l-1 GA3. A factorial analysis reveals that the interaction between GA3 and NAA/BAP plays an important role in shoot regeneration. These results provide new tools for the in vitro regeneration of naranjilla plants, improving on previously reported protocols for this species by using alternative explant types and regeneration protocols.
体外繁殖方法的发展可以改善目前植物的商业用途和保护,如naranjilla(Solanum quitoense),这是一种独特的安第斯作物和关键的新兴农产品。在本研究中,我们报道了naranjilla顶芽、下胚轴和叶柄的体外培养方案。在顶芽培养中,添加0.10的MS培养基 毫克 l-1-萘乙酸(NAA)产生的植株较长,叶片较多。在添加NAA、6-苄基氨基嘌呤(BAP)和赤霉酸(GA3)不同组合的MS培养基中使用较老的外植体时,下胚轴培养产生较高的芽数。当使用添加0.02的MS培养基时,叶柄培养基每个外植体产生的芽数显著更高,叶片更丰富、更大 毫克 l-1 NAA,4.50 毫克 l-1 BAP和1.00 毫克 l-1 GA3。因子分析表明,GA3与NAA/BAP的相互作用在芽再生中起着重要作用。这些结果为naranjilla植物的体外再生提供了新的工具,通过使用替代外植体类型和再生方案改进了先前报道的该物种的方案。
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引用次数: 2
Aberrant endosperm formation caused by reduced production of major allergen proteins in a rice flo2 mutant that confers low-protein accumulation in grains. 由水稻flo2突变体中主要过敏原蛋白的产生减少引起的胚乳形成异常,该突变体在谷物中的蛋白质积累较低。
IF 1.6 4区 生物学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2019-06-25 DOI: 10.5511/PLANTBIOTECHNOLOGY.19.0312A
Hiroshi Teramura, Kyoko Kondo, Masato Suzuki, Hiroaki Kobayashi, Tsutomu Furukawa, Hiroaki Kusano, H. Shimada
Rice flo2 mutation produces grains showing a reduced amount of storage proteins. Using Nipponbare and the flo2 mutant, we created rice transformants that showed defective production of major allergen proteins RA14 and RA33 (14-16 kDa and 33 kDa allergen proteins, respectively) by RNAi introduction. The knock-down transformant generated using Nipponbare showed greatly reduced accumulation of both allergen proteins, normal growth, and production of a sufficient amount of normal-shaped seeds. F1 seeds were obtained by crossing between the transformants containing RNAi genes to RA14 and RA33, and showed decreased accumulation of both proteins. However, a peculiar phenotype was observed in the flo2 transformants that lacked accumulation of RA14 or RA33. They showed significantly reduced fertility. A wrinkled grain feature was found on the transformant lacking accumulation of RA14. F1 seeds obtained by crossing these transformants showed significantly lower fertility. F2 seeds showed decreases in both allergen proteins but morphological abnormality with small and severely wrinkled features. These results indicated that it is hard to obtain any transformant lacking accumulation of these allergen proteins using the flo2 mutant, whereas a knock-down transformant of both allergen protein genes was obtained when a wild-type Nipponbare was used as a host. These facts strongly suggest that RA14 and RA33 have some roles in rice seeds.
水稻flo2突变产生的籽粒储存蛋白量减少。利用Nipponbare和flo2突变体,我们通过RNAi导入构建了主要过敏原蛋白RA14和RA33(分别为14-16 kDa和33 kDa)产生缺陷的水稻转化子。使用Nipponbare产生的基因敲除转化表明,过敏原蛋白的积累大大减少,生长正常,并产生了足够数量的正常形状的种子。将含有RNAi基因的转化子与RA14和RA33杂交获得F1种子,两种蛋白的积累均有所减少。然而,在flo2转化体中观察到一种特殊的表型,缺乏RA14或RA33的积累。他们的生育能力明显下降。在缺乏RA14积累的相变过程中发现了褶皱的晶粒特征。通过这些转化体杂交获得的F1种子的育性明显较低。F2种子两种过敏原蛋白含量均下降,但形态异常,呈小而严重的皱缩特征。这些结果表明,使用flo2突变体很难获得缺乏这些过敏原蛋白积累的任何转化,而当使用野生型日本裸鼠作为宿主时,获得了两个过敏原蛋白基因的敲除转化。这些事实有力地说明RA14和RA33在水稻种子中有一定的作用。
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引用次数: 2
Tissue Culture 组织培养
IF 1.6 4区 生物学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2019-01-15 DOI: 10.1201/9780429057267-1
S. Umesha
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引用次数: 0
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Plant Biotechnology
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