Pub Date : 2019-10-14DOI: 10.1007/978-3-030-35210-3_3
Jennifer Eng, Elmar Bucher, Elliot Gray, L. Campbell, Guillaume Thibault, Laura M. Heiser, Summer L. Gibbs, J. Gray, K. Chin, Y. Chang
{"title":"cmIF: A Python Library for Scalable Multiplex Imaging Pipelines","authors":"Jennifer Eng, Elmar Bucher, Elliot Gray, L. Campbell, Guillaume Thibault, Laura M. Heiser, Summer L. Gibbs, J. Gray, K. Chin, Y. Chang","doi":"10.1007/978-3-030-35210-3_3","DOIUrl":"https://doi.org/10.1007/978-3-030-35210-3_3","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"120 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115086831","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2019-10-14DOI: 10.1007/978-3-030-35210-3_7
C. Vaghi, A. Rodallec, R. Fanciullino, J. Ciccolini, J. Mochel, M. Mastri, J. Ebos, C. Poignard, S. Benzekry
{"title":"Population Modeling of Tumor Growth Curves, the Reduced Gompertz Model and Prediction of the Age of a Tumor","authors":"C. Vaghi, A. Rodallec, R. Fanciullino, J. Ciccolini, J. Mochel, M. Mastri, J. Ebos, C. Poignard, S. Benzekry","doi":"10.1007/978-3-030-35210-3_7","DOIUrl":"https://doi.org/10.1007/978-3-030-35210-3_7","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"1575 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125132057","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2019-10-14DOI: 10.1007/978-3-030-35210-3_5
Victor Tkachev, A. Buzdin, Nicolas Borisov
{"title":"Flexible Data Trimming for Different Machine Learning Methods in Omics-Based Personalized Oncology","authors":"Victor Tkachev, A. Buzdin, Nicolas Borisov","doi":"10.1007/978-3-030-35210-3_5","DOIUrl":"https://doi.org/10.1007/978-3-030-35210-3_5","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"32 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129213349","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2019-10-14DOI: 10.1007/978-3-030-35210-3_2
G. Kimmel, J. Barnholtz-Sloan, Hanlee P. Ji, P. Altrock, N. Andor
{"title":"Modeling the Evolution of Ploidy in a Resource Restricted Environment","authors":"G. Kimmel, J. Barnholtz-Sloan, Hanlee P. Ji, P. Altrock, N. Andor","doi":"10.1007/978-3-030-35210-3_2","DOIUrl":"https://doi.org/10.1007/978-3-030-35210-3_2","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"3 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128924762","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2019-10-14DOI: 10.1007/978-3-030-35210-3_6
D. Abler, P. Büchler, R. Rockne
{"title":"Towards Model-Based Characterization of Biomechanical Tumor Growth Phenotypes","authors":"D. Abler, P. Büchler, R. Rockne","doi":"10.1007/978-3-030-35210-3_6","DOIUrl":"https://doi.org/10.1007/978-3-030-35210-3_6","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"34 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"132159221","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2019-10-14DOI: 10.1007/978-3-030-35210-3_1
Yifeng Tao, Haoyun Lei, Adrian V. Lee, Jian Ma, R. Schwartz
{"title":"Phylogenies Derived from Matched Transcriptome Reveal the Evolution of Cell Populations and Temporal Order of Perturbed Pathways in Breast Cancer Brain Metastases","authors":"Yifeng Tao, Haoyun Lei, Adrian V. Lee, Jian Ma, R. Schwartz","doi":"10.1007/978-3-030-35210-3_1","DOIUrl":"https://doi.org/10.1007/978-3-030-35210-3_1","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"75 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125958252","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 1900-01-01DOI: 10.1007/978-3-030-64511-3_10
Phillip B. Nicol
{"title":"Detecting Subclones from Spatially Resolved RNA-Seq Data","authors":"Phillip B. Nicol","doi":"10.1007/978-3-030-64511-3_10","DOIUrl":"https://doi.org/10.1007/978-3-030-64511-3_10","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"59 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129213409","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 1900-01-01DOI: 10.1007/978-3-030-64511-3_1
J. Clairambault
{"title":"Plasticity in Cancer Cell Populations: Biology, Mathematics and Philosophy of Cancer","authors":"J. Clairambault","doi":"10.1007/978-3-030-64511-3_1","DOIUrl":"https://doi.org/10.1007/978-3-030-64511-3_1","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"24 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134032604","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 1900-01-01DOI: 10.1007/978-3-030-64511-3_2
Cristian Axenie, Daria Kurz
{"title":"CHIMERA: Combining Mechanistic Models and Machine Learning for Personalized Chemotherapy and Surgery Sequencing in Breast Cancer","authors":"Cristian Axenie, Daria Kurz","doi":"10.1007/978-3-030-64511-3_2","DOIUrl":"https://doi.org/10.1007/978-3-030-64511-3_2","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"27 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115638378","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 1900-01-01DOI: 10.1007/978-3-030-64511-3_11
Ofek Shami-Schnitzer, Zohar Zafrir, T. Tuller
{"title":"Novel Driver Synonymous Mutations in the Coding Regions of GCB Lymphoma Patients Improve the Transcription Levels of BCL2","authors":"Ofek Shami-Schnitzer, Zohar Zafrir, T. Tuller","doi":"10.1007/978-3-030-64511-3_11","DOIUrl":"https://doi.org/10.1007/978-3-030-64511-3_11","url":null,"abstract":"","PeriodicalId":212757,"journal":{"name":"International Symposium on Mathematical and Computational Oncology","volume":"19 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116819782","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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