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Accounting for biological aggregation in heating and imaging of magnetic nanoparticles. 在磁性纳米粒子的加热和成像中考虑生物聚集。
Pub Date : 2014-09-01 DOI: 10.1142/S2339547814500198
Michael L Etheridge, Katie R Hurley, Jinjin Zhang, Seongho Jeon, Hattie L Ring, Christopher Hogan, Christy L Haynes, Michael Garwood, John C Bischof

Aggregation is a known consequence of nanoparticle use in biology and medicine; however, nanoparticle characterization is typically performed under the pretext of well-dispersed, aqueous conditions. Here, we systematically characterize the effects of aggregation on the alternating magnetic field induced heating and magnetic resonance (MR) imaging performance of iron oxide nanoparticles (IONPs) in non-ideal biological systems. Specifically, the behavior of IONP aggregates composed of ~10 nm primary particles, but with aggregate hydrodynamic sizes ranging from 50 nm to 700 nm, was characterized in phosphate buffered saline and fetal bovine serum suspensions, as well as in gels and cells. We demonstrate up to a 50% reduction in heating, linked to the extent of aggregation. To quantify aggregate morphology, we used a combination of hydrodynamic radii distribution, intrinsic viscosity, and electron microscopy measurements to describe the aggregates as quasifractal entities with fractal dimensions in the 1.8-2.0 range. Importantly, we are able to correlate the observed decrease in magnetic field induced heating with a corresponding decrease in longitudinal relaxation rate (R1) in MR imaging, irrespective of the extent of aggregation. Finally, we show in vivo proof-of-principle use of this powerful new imaging method, providing a critical tool for predicting heating in clinical cancer hyperthermia.

众所周知,纳米粒子在生物学和医学中的应用会产生聚集现象;然而,纳米粒子的表征通常是在分散良好的水性条件下进行的。在这里,我们系统地描述了聚集对氧化铁纳米粒子(IONPs)在非理想生物系统中交变磁场诱导加热和磁共振(MR)成像性能的影响。具体来说,我们研究了在磷酸盐缓冲盐水和胎牛血清悬浮液以及凝胶和细胞中,由 ~10 nm 主颗粒组成但聚合体流体力学尺寸从 50 nm 到 700 nm 不等的 IONP 聚合体的行为。我们发现,与聚集程度相关的加热效果最多可降低 50%。为了量化聚集体形态,我们结合使用了流体力学半径分布、固有粘度和电子显微镜测量方法,将聚集体描述为分形尺寸在 1.8-2.0 范围内的准分形实体。重要的是,我们能够将观察到的磁场诱导加热的减少与核磁共振成像中纵向弛豫速率(R1)的相应减少联系起来,而与聚集的程度无关。最后,我们展示了这种强大的新成像方法在体内的原理性应用,为预测临床癌症热疗中的加热情况提供了重要工具。
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引用次数: 0
The impact of mind-body awareness training on the early learning of a brain-computer interface. 身心意识训练对脑机接口早期学习的影响。
Pub Date : 2014-09-01 DOI: 10.1142/S233954781450023X
Kaitlin Cassady, Albert You, Alex Doud, Bin He

Brain-computer interface (BCI) systems allow users to interact with their environment by bypassing muscular control to tap directly into the users' thoughts. In the present study, we investigate the role of prior experience with yoga and meditation, examples of formalized mind-body awareness training (MBAT), in learning to use a one-dimensional sensorimotor rhythm based BCI. Thirty-six human subjects volunteered to participate in two different cohorts based on past experience with MBAT - experienced MBAT practitioners and controls. All subjects participated in three BCI experiments to achieve competency in controlling the BCI system. The MBAT cohort achieved BCI competency significantly faster than the control cohort. In addition, the MBAT cohort demonstrated enhanced ability to control the system on various measures of BCI performance and improved significantly more over time when compared to control. Our work provides insight into valuable strategies for reducing barriers to BCI fluency that limit the more widespread use of these systems.

脑机接口(BCI)系统允许用户绕过肌肉控制,直接进入用户的思想,与他们的环境进行交互。在本研究中,我们调查了先前的瑜伽和冥想经验,形式化身心意识训练(MBAT)的例子,在学习使用基于一维感觉运动节奏的脑机接口中的作用。36名人类受试者根据过去的MBAT经验自愿参加两个不同的队列——经验丰富的MBAT实践者和对照组。所有被试都参与了三个脑机接口实验,以获得脑机接口系统的控制能力。MBAT组获得脑机接口能力的速度明显快于对照组。此外,与对照组相比,MBAT组在BCI性能的各种测量中显示出更强的控制系统的能力,并且随着时间的推移显着改善。我们的工作为减少BCI流畅性障碍提供了有价值的策略,这些障碍限制了这些系统的更广泛使用。
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引用次数: 43
Brain-on-a-chip microsystem for investigating traumatic brain injury: Axon diameter and mitochondrial membrane changes play a significant role in axonal response to strain injuries. 研究外伤性脑损伤的脑芯片微系统:轴突直径和线粒体膜的变化在轴突应变损伤反应中起重要作用。
Pub Date : 2014-06-01 DOI: 10.1142/S2339547814500095
Jean-Pierre Dollé, Barclay Morrison, Rene S Schloss, Martin L Yarmush

Diffuse axonal injury (DAI) is a devastating consequence of traumatic brain injury, resulting in significant axon and neuronal degeneration. Currently, therapeutic options are limited. Using our brain-on-a-chip device, we evaluated axonal responses to DAI. We observed that axonal diameter plays a significant role in response to strain injury, which correlated to delayed elasticity and inversely correlated to axonal beading and axonal degeneration. When changes in mitochondrial membrane potential (MMP) were monitored an applied strain injury threshold was noted, below which delayed hyperpolarization was observed and above which immediate depolarization occurred. When the NHE-1 inhibitor EIPA was administered before injury, inhibition in both hyperpolarization and depolarization occurred along with axonal degeneration. Therefore, axonal diameter plays a significant role in strain injury and our brain-on-a-chip technology can be used both to understand the biochemical consequences of DAI and screen for potential therapeutic agents.

弥漫性轴索损伤(DAI)是外伤性脑损伤的一种严重后果,可导致严重的轴突和神经元变性。目前,治疗选择是有限的。使用我们的脑芯片设备,我们评估了轴突对DAI的反应。我们观察到,轴突直径在应变损伤的响应中起着重要作用,它与延迟弹性相关,与轴突编织和轴突变性呈负相关。当监测线粒体膜电位(MMP)的变化时,注意到施加应变损伤阈值,低于该阈值时观察到延迟超极化,高于该阈值时发生立即去极化。损伤前给予NHE-1抑制剂EIPA,超极化和去极化抑制均随轴突变性发生。因此,轴突直径在应变损伤中起着重要作用,我们的脑芯片技术既可以用来了解DAI的生化后果,也可以用来筛选潜在的治疗药物。
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引用次数: 23
Rapid ratiometric biomarker detection with topically applied SERS nanoparticles. 局部应用SERS纳米颗粒的快速比例生物标志物检测。
Pub Date : 2014-06-01 DOI: 10.1142/S2339547814500125
Yu Winston Wang, Altaz Khan, Madhura Som, Danni Wang, Ye Chen, Steven Y Leigh, Daphne Meza, Patrick Z McVeigh, Brian C Wilson, Jonathan T C Liu

Multiplexed surface-enhanced Raman scattering (SERS) nanoparticles (NPs) offer the potential for rapid molecular phenotyping of tissues, thereby enabling accurate disease detection as well as patient stratification to guide personalized therapies or to monitor treatment outcomes. The clinical success of molecular diagnostics based on SERS NPs would be facilitated by the ability to accurately identify tissue biomarkers under time-constrained staining and detection conditions with a portable device. In vitro, ex vivo and in vivo experiments were performed to optimize the technology and protocols for the rapid detection (0.1-s integration time) of multiple cell-surface biomarkers with a miniature fiber-optic spectral-detection probe following a brief (5 min) topical application of SERS NPs on tissues. Furthermore, we demonstrate that the simultaneous detection and ratiometric quantification of targeted and nontargeted NPs allows for an unambiguous assessment of molecular expression that is insensitive to nonspecific variations in NP concentrations.

多路表面增强拉曼散射(SERS)纳米颗粒(NPs)提供了快速组织分子表型的潜力,从而实现准确的疾病检测以及患者分层,以指导个性化治疗或监测治疗结果。基于SERS NPs的分子诊断的临床成功将有助于在时间限制的染色和便携式设备的检测条件下准确识别组织生物标志物。在体外、离体和体内实验中,优化了在短暂(5分钟)局部应用SERS NPs后,用微型光纤光谱检测探针快速检测多种细胞表面生物标志物(0.1 s整合时间)的技术和方案。此外,我们证明了靶向和非靶向NP的同时检测和比例量化允许对NP浓度的非特异性变化不敏感的分子表达进行明确的评估。
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引用次数: 62
Eradication of multidrug-resistant A. baumannii in burn wounds by antiseptic pulsed electric field. 抗菌脉冲电场根除烧伤创面耐多药鲍曼不动杆菌。
Pub Date : 2014-06-01
Alexander Golberg, G Felix Broelsch, Daniela Vecchio, Saiqa Khan, Michael R Hamblin, William G Austen, Robert L Sheridan, Martin L Yarmush

Emerging bacterial resistance to multiple drugs is an increasing problem in burn wound management. New non-pharmacologic interventions are needed for burn wound disinfection. Here we report on a novel physical method for disinfection: antiseptic pulsed electric field (PEF) applied externally to the infected burns. In a mice model, we show that PEF can reduce the load of multidrug resistant Acinetobacter baumannii present in a full thickness burn wound by more than four orders of magnitude, as detected by bioluminescence imaging. Furthermore, using a finite element numerical model, we demonstrate that PEF provides non-thermal, homogeneous, full thickness treatment for the burn wound, thus, overcoming the limitation of treatment depth for many topical antimicrobials. These modeling tools and our in vivo results will be extremely useful for further translation of the PEF technology to the clinical setting, as they provide the essential elements for planning of electrode design and treatment protocol.

新出现的细菌对多种药物的耐药性是烧伤创面管理中日益严重的问题。烧伤创面消毒需要新的非药物干预措施。在这里,我们报告了一种新的物理消毒方法:抗菌脉冲电场(PEF)应用于感染烧伤的外部。在小鼠模型中,我们发现PEF可以通过生物发光成像将全层烧伤创面中存在的多药耐药鲍曼不动杆菌的负荷降低4个数量级以上。此外,使用有限元数值模型,我们证明了PEF为烧伤创面提供非热、均匀、全层处理,从而克服了许多局部抗菌剂治疗深度的限制。这些建模工具和我们的体内结果将对PEF技术进一步转化为临床环境非常有用,因为它们为电极设计和治疗方案的规划提供了基本要素。
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引用次数: 0
A microfluidic device to select for cells based on chemotactic phenotype. 一种基于趋化表型的细胞选择微流控装置。
Pub Date : 2014-06-01 DOI: 10.1142/S2339547814200015
Saumendra Bajpai, Michael J Mitchell, Michael R King, Cynthia A Reinhart-King

In the search for biomarkers of metastasis, attention has been largely placed on ensemble-averaged measurements that screen for molecules or genes. However, individual molecular changes do not always result in disease, and population-based measurements can mask the molecular signatures of the cells responsible for disease. Here, we describe a device that selects for cells based on chemotactic behavior rather than based on molecular differences, enabling the most aggressive cells to be studied independently from the heterogeneous population.

在寻找转移的生物标志物时,注意力主要集中在筛选分子或基因的总体平均测量上。然而,个体分子变化并不总是导致疾病,基于人群的测量可以掩盖导致疾病的细胞的分子特征。在这里,我们描述了一种基于趋化行为而不是基于分子差异来选择细胞的装置,使最具攻击性的细胞能够独立于异质群体进行研究。
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引用次数: 7
Aqueous two-phase systems enable multiplexing of homogeneous immunoassays. 水两相系统使均质免疫测定的多路复用。
Pub Date : 2014-06-01 DOI: 10.1142/S2339547814500150
Arlyne B Simon, John P Frampton, Nien-Tsu Huang, Katsuo Kurabayashi, Sophie Paczesny, Shuichi Takayama

Quantitative measurement of protein biomarkers is critical for biomarker validation and early disease detection. Current multiplex immunoassays are time consuming costly and can suffer from low accuracy. For example, multiplex ELISAs require multiple, tedious, washing and blocking steps. Moreover, they suffer from nonspecific antibody cross-reactions, leading to high background and false-positive signals. Here, we show that co-localizing antibody-bead pairs in an aqueous two-phase system (ATPS) enables multiplexing of sensitive, no-wash, homogeneous assays, while preventing nonspecific antibody cross-reactions. Our cross-reaction-free, multiplex assay can simultaneously detect picomolar concentrations of four protein biomarkers ((C-X-C motif) ligand 10 (CXCL10), CXCL9, interleukin (IL)-8 and IL-6) in cell supernatants using a single assay well. The potential clinical utility of the assay is demonstrated by detecting diagnostic biomarkers (CXCL10 and CXCL9) in plasma from 88 patients at the onset of the clinical symptoms of chronic graft-versus-host disease (GVHD).

蛋白质生物标志物的定量测量对于生物标志物验证和早期疾病检测至关重要。目前的多重免疫测定既耗时又昂贵,而且准确度低。例如,多重elisa需要多个繁琐的洗涤和阻断步骤。此外,它们遭受非特异性抗体交叉反应,导致高背景和假阳性信号。在这里,我们展示了在水两相系统(ATPS)中共定位抗体-头对可以实现敏感,免洗,均质分析的多路复用,同时防止非特异性抗体交叉反应。我们的无交叉反应,多重检测可以同时检测细胞上清中四种蛋白质生物标志物((C-X-C基序)配体10 (CXCL10), CXCL9,白细胞介素(IL)-8和IL-6)的皮摩尔浓度。通过检测88例慢性移植物抗宿主病(GVHD)临床症状发作患者血浆中的诊断性生物标志物(CXCL10和CXCL9),证明了该检测方法的潜在临床实用性。
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引用次数: 19
Faraday instability-based micro droplet ejection for inhalation drug delivery. 基于法拉第不稳定性的微滴喷射吸入给药。
Pub Date : 2014-03-01 DOI: 10.1142/S233954781450006X
C S Tsai, R W Mao, S K Lin, Y Zhu, S C Tsai

We report here the technology and the underlying science of a new device for inhalation (pulmonary) drug delivery which is capable of fulfilling needs unmet by current commercial devices. The core of the new device is a centimeter-size clog-free silicon-based ultrasonic nozzle with multiple Fourier horns in resonance at megahertz (MHz) frequency. The dramatic resonance effect among the multiple horns and high growth rate of the MHz Faraday waves excited on a medicinal liquid layer together facilitate ejection of monodisperse droplets of desirable size range (2-5 µm) at low electrical drive power (<1.0 W). The small nozzle requiring low drive power has enabled realization of a pocket-size (8.6 × 5.6 × 1.5 cm3) ultrasonic nebulizer. A variety of common pulmonary drugs have been nebulized using the pocket-size unit with desirable aerosol sizes and output rate. These results clearly provide proof-of-principle for the new device and confirm its potential for commercialization.

我们在此报告了一种用于吸入(肺)给药的新设备的技术和基础科学,该设备能够满足当前商用设备未满足的需求。这个新装置的核心是一个厘米大小的无堵塞硅基超声波喷嘴,它有多个傅立叶角,在兆赫兹(MHz)频率下共振。(3)超声雾化器在低电驱动功率下,多个喇叭之间的显著共振效应和在药液层上激发的MHz法拉第波的高增长速度共同促进了理想尺寸范围(2-5µm)的单分散液滴喷射。使用具有理想气溶胶大小和输出速率的口袋大小的单元雾化各种常见的肺部药物。这些结果清楚地为新设备提供了原理证明,并确认了其商业化的潜力。
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引用次数: 16
Diffeomorphometry and geodesic positioning systems for human anatomy. 人体解剖用差形测量和测地线定位系统。
Pub Date : 2014-03-01 DOI: 10.1142/S2339547814500010
Michael I Miller, Laurent Younes, Alain Trouvé

The Computational Anatomy project has largely been a study of large deformations within a Riemannian framework as an efficient point of view for generating metrics between anatomical configurations. This approach turns D'Arcy Thompson's comparative morphology of human biological shape and form into a metrizable space. Since the metric is constructed based on the geodesic length of the flows of diffeomorphisms connecting the forms, we call it diffeomorphometry. Just as importantly, since the flows describe algebraic group action on anatomical submanifolds and associated functional measurements, they become the basis for positioning information, which we term geodesic positioning. As well the geodesic connections provide Riemannian coordinates for locating forms in the anatomical orbit, which we call geodesic coordinates. These three components taken together - the metric, geodesic positioning of information, and geodesic coordinates - we term the geodesic positioning system. We illustrate via several examples in human and biological coordinate systems and machine learning of the statistical representation of shape and form.

计算解剖学项目在很大程度上是对黎曼框架内的大变形的研究,作为在解剖构型之间生成度量的有效观点。这种方法将达西·汤普森关于人类生物形态和形态的比较形态学转化为可度量的空间。由于度量是基于连接形式的微分同态流的测地线长度构建的,因此我们称之为微分同态。同样重要的是,由于这些流描述了解剖子流形上的代数群作用和相关的功能测量,它们成为定位信息的基础,我们称之为测地线定位。同时,测地线连接提供了在解剖轨道中定位形状的黎曼坐标,我们称之为测地线坐标。这三个组成部分合在一起——度量、测地线定位信息和测地线坐标——我们称之为测地线定位系统。我们通过人类和生物坐标系统中的几个例子以及形状和形式的统计表示的机器学习来说明。
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引用次数: 61
Organomatics and organometrics: Novel platforms for long-term whole-organ culture. 器官学和器官计量学:长期全器官培养的新平台。
Pub Date : 2014-03-01 DOI: 10.1142/S2339547814300029
Bote G Bruinsma, Martin L Yarmush, Korkut Uygun

Organ culture systems are instrumental as experimental whole-organ models of physiology and disease, as well as preservation modalities facilitating organ replacement therapies such as transplantation. Nevertheless, a coordinated system of machine perfusion components and integrated regulatory control has yet to be fully developed to achieve long-term maintenance of organ function ex vivo. Here we outline current strategies for organ culture, or organomatics, and how these systems can be regulated by means of computational algorithms, or organometrics, to achieve the organ culture platforms anticipated in modern-day biomedicine.

器官培养系统作为生理和疾病的实验全器官模型,以及促进器官替代疗法(如移植)的保存方式,是有用的。然而,一个由机器灌注成分和综合调节控制组成的协调系统尚未完全发展起来,以实现器官功能的长期体外维持。在这里,我们概述了器官培养或器官学的当前策略,以及如何通过计算算法或器官计量学来调节这些系统,以实现现代生物医学中预期的器官培养平台。
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引用次数: 12
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