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Identification of hub genes and biological pathways in glioma via integrated bioinformatics analysis 通过综合生物信息学分析鉴定胶质瘤中枢基因和生物学途径
Pub Date : 2022-06-01 DOI: 10.1177/03000605221103976
Lulu Chen, Tao Sun, Jian Li, Yongxuan Zhao
Objective Glioma is the most common intracranial primary malignancy, but its pathogenesis remains unclear. Methods We integrated four eligible glioma microarray datasets from the gene expression omnibus database using the robust rank aggregation method to identify a group of significantly differently expressed genes (DEGs) between glioma and normal samples. We used these DEGs to explore key genes closely associated with glioma survival through weighted gene co-expression network analysis. We then constructed validations of prognosis and survival analyses for the key genes via multiple databases. We also explored their potential biological functions using gene set enrichment analysis (GSEA) and gene set variation analysis (GSVA). Results We selected DLGAP5, CDCA8, NCAPH, and CCNB2, as four genes that were abnormally up-regulated in glioma samples, for verification. They showed high levels of isocitrate dehydrogenase gene mutation and tumor grades, as well as good prognostic and diagnostic value for glioma. Their methylation levels were generally lower in glioma samples. GSEA and GSVA analyses suggested the genes were closely involved with glioma proliferation. Conclusion These findings provide new insights into the pathogenesis of glioma. The hub genes have the potential to be used as diagnostic and therapeutic markers.
目的胶质瘤是颅内最常见的原发性恶性肿瘤,但其发病机制尚不清楚。方法从基因表达综合数据库中整合4个符合条件的胶质瘤微阵列数据集,采用鲁棒秩聚集法鉴定胶质瘤样本与正常样本之间表达差异显著的基因(DEGs)。我们使用这些deg通过加权基因共表达网络分析来探索与胶质瘤生存密切相关的关键基因。然后,我们通过多个数据库构建了关键基因的预后和生存分析验证。我们还利用基因集富集分析(GSEA)和基因集变异分析(GSVA)探讨了它们潜在的生物学功能。结果我们选择了DLGAP5、CDCA8、NCAPH和CCNB2这四个在胶质瘤样本中异常上调的基因进行验证。他们表现出高水平的异柠檬酸脱氢酶基因突变和肿瘤分级,以及对胶质瘤的良好预后和诊断价值。它们的甲基化水平在胶质瘤样本中普遍较低。GSEA和GSVA分析表明,这些基因与胶质瘤的增殖密切相关。结论这些发现为胶质瘤的发病机制提供了新的认识。枢纽基因具有作为诊断和治疗标记物的潜力。
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引用次数: 1
Clinical outcomes of AngioJet rheolytic thrombectomy in the treatment of May–Thurner syndrome-related deep venous thrombosis 血管喷射血流溶栓术治疗May-Thurner综合征相关深静脉血栓的临床疗效
Pub Date : 2022-06-01 DOI: 10.1177/03000605221100134
Wen-Cheng Wei, C. Hsin, Hsuan-Tzu Yang, Ta-Wei Su, I. Su, S. Chu, P. Ko, Sheng-Yueh Yu, Chun-Hui Lee
Objective May–Thurner syndrome (MTS) is an anatomic stenotic variation associated with deep vein thrombosis (DVT) of the left leg. The classical DVT treatment strategy is medical treatment without thrombus removal. This study was performed to assess the clinical outcomes of the combination of AngioJet™ rheolytic thrombectomy and stenting for treatment of MTS-related DVT. Methods We conducted a retrospective cohort study of patients treated for MTS-related DVT from January 2017 to June 2020 at a single institution. Results Fourteen patients (nine women) underwent AngioJet™ rheolytic thrombectomy for MTS-related DVT during the study period. The median DVT onset time was 8 days (interquartile range (IQR), 3–21 days). The median procedure time was 130 minutes (IQR, 91–189 minutes), and the median hospital stay was 7 days (IQR, 5–26 days). One patient had a residual thrombus and occluded iliac stent and underwent adjuvant catheter-directed thrombolysis for revascularization. The primary patency rate for the iliac stent was 92.9% at 12 months. Conclusion Concomitant AngioJet™ rheolytic thrombectomy and stenting of MTS-induced lesions may be beneficial for patients with MTS-related DVT.
目的May-Thurner综合征(MTS)是一种与左腿深静脉血栓形成(DVT)相关的解剖性狭窄变异。经典的深静脉血栓治疗策略是不清除血栓的药物治疗。本研究旨在评估AngioJet™溶栓术联合支架置入术治疗mts相关性DVT的临床结果。方法:我们对2017年1月至2020年6月在单一机构接受mts相关DVT治疗的患者进行了回顾性队列研究。结果在研究期间,14例患者(9名女性)接受了AngioJet™流变性血栓切除术治疗mts相关的DVT。中位DVT发病时间为8天(四分位间距(IQR), 3-21天)。中位手术时间为130分钟(IQR, 91 ~ 189分钟),中位住院时间为7天(IQR, 5 ~ 26天)。1例患者有残留血栓和闭塞的髂支架,并接受辅助导管定向溶栓进行血运重建。12个月时,髂内支架初次通畅率为92.9%。结论合并AngioJet™溶栓术和支架置入术可能对mts相关DVT患者有益。
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引用次数: 2
Association of bladder trabeculation and neurogenic bladder with spinal cord injury 膀胱小梁和神经源性膀胱与脊髓损伤的关系
Pub Date : 2022-06-01 DOI: 10.1177/03000605221104768
Y. Won, Da-Sol Kim, Gi-Wook Kim, Sung-Hee Park, M. Ko, Jeong-Hwan Seo
Objective To compare clinical findings and urodynamic parameters according to trabeculation grade and analyze their correlations with trabeculation severity in neurogenic bladder caused by suprasacral spinal cord injury (SCI). Methods A retrospective chart review was performed of neurogenic bladder caused by SCI. Bladder trabeculation grade was compared with SCI-related clinical parameters and bladder-related urodynamic parameters. Results In SCI patients, factors such as disease duration, bladder capacity, detrusor pressure, peak detrusor pressure values, and compliance were significantly different between different grades of bladder trabeculation, while neurological level of injury, completeness, and detrusor sphincter dyssynergia had no clear relationship with bladder trabeculation grade. In the correlation analysis, vesicoureteral reflux was moderately correlated with trabeculation grade (correlation coefficient 0.433), while the correlation coefficients of disease duration, involuntary detrusor contraction, and bladder filling volume were between 0.3 and 0.4. Conclusion Bladder trabeculation with suprasacral-type neurogenic bladder was graded. Although disease duration was positively correlated with bladder trabeculation grade, differences in the neurological level of injury or American Spinal Injury Association Impairment Scale score were not observed. Bladder volume, peak detrusor pressure, compliance, reflex volume, and vesicoureteral reflux also showed significant differences according to trabeculation grade. Vesicoureteral reflux was moderately correlated with trabeculation grade.
目的比较骶上脊髓损伤(SCI)神经源性膀胱小梁程度的临床表现和尿动力学参数,并分析其与小梁严重程度的相关性。方法回顾性分析脊髓损伤所致神经源性膀胱病例。将膀胱小梁分级与sci相关临床参数和膀胱相关尿动力学参数进行比较。结果脊髓损伤患者的病程、膀胱容量、逼尿肌压力、逼尿肌峰值压力值、依从性等因素在不同程度的膀胱小梁间存在显著差异,神经损伤程度、完整性、逼尿肌括约肌协同障碍与膀胱小梁程度无明显关系。在相关分析中,膀胱输尿管反流与小梁分级中度相关(相关系数0.433),而病程、不自主逼尿肌收缩与膀胱填充量的相关系数在0.3 ~ 0.4之间。结论骶上型神经源性膀胱小梁是分级的。尽管病程与膀胱小梁分级呈正相关,但未观察到损伤的神经水平或美国脊髓损伤协会损伤量表评分的差异。膀胱容积、逼尿肌压力峰值、顺应性、反射容积、膀胱输尿管反流也随小梁级别的不同而有显著差异。膀胱输尿管反流与小梁分级中度相关。
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引用次数: 1
Intraoperative use of noninvasive ventilation during spinal anaesthesia in patients with severe chronic obstructive pulmonary disease undergoing orthopaedic surgery: A case report 严重慢性阻塞性肺疾病矫形手术患者脊柱麻醉术中无创通气的应用:1例报告
Pub Date : 2022-05-01 DOI: 10.1177/03000605221103968
Misoon Lee, Jinyoung So, Y. Woo, Jaewoong Jung, Y. Chung, B. Koo
Compared with invasive mechanical ventilation, noninvasive ventilation (NIV) improves patient comfort and neurocognitive function; and reduces the likelihood of nosocomial infections and the need for sedation. NIV can also be used perioperatively to prevent postoperative pulmonary complications. This current report describes a case of a 64-year-old female patient with chronic obstructive pulmonary disease and chronic respiratory failure that underwent spinal anaesthesia during surgery. She was sedated with propofol. She brought her home ventilator equipment to the operating room and it was used in biphasic-positive airway pressure mode for immediate treatment of respiratory depression.
与有创机械通气相比,无创通气可改善患者的舒适度和神经认知功能;并减少院内感染的可能性和镇静的需要。NIV也可以围手术期使用,以防止术后肺部并发症。本报告描述了一例64岁女性慢性阻塞性肺疾病和慢性呼吸衰竭患者在手术期间接受脊髓麻醉。她被注射了异丙酚镇静剂。她将家用呼吸机设备带到手术室,在双相气道正压模式下立即治疗呼吸抑制。
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引用次数: 2
Mechanistic analysis of erectile dysfunction in a depression rat model 抑郁症大鼠勃起功能障碍的机制分析
Pub Date : 2022-05-01 DOI: 10.1177/03000605221100334
Zhi-ming Hong, Zi-Long Chen, Junlong Feng, Sheng-jie Wang, J. Qiu, Y. Zeng, Quan Wang, Ji-sheng Wang
Objective Most men suffering from depression have different degrees of erectile dysfunction (ED), but the relationship between depression and ED is not clear. This study explored the effect of depression on erectile function in rats and the underlying mechanism. Methods The potential targets and key signaling pathways of depression and ED were predicted through bioinformatics analysis, and a depression rat model was established by inducing chronic restraint stress. Pathological changes in rat penis tissue were studied by hematoxylin and eosin staining. The serum dopamine level was quantified by an enzyme-linked immunosorbent assay. The expression of related proteins and mRNA was detected by western blotting and real-time quantitative reverse transcription-polymerase chain reaction. Results Hematoxylin and eosin staining showed pathological damage in the penile tissue of the model group rats. The serum dopamine level, dopamine receptor D2 (DRD2) and solute carrier family 6 member 3 (SLC6A3) protein levels in penile tissue, and DRD2 and SLC6A3 mRNA levels were lower in the model group than in the control group. Conclusion The decrease in erectile function in the depression rat model was related to dysfunction of the dopamine system and dopaminergic synapse signaling pathway.
目的大多数男性抑郁症患者存在不同程度的勃起功能障碍,但抑郁症与勃起功能障碍的关系尚不清楚。本研究探讨抑郁对大鼠勃起功能的影响及其机制。方法通过生物信息学分析预测抑郁症和ED的潜在靶点和关键信号通路,并通过诱导慢性抑制性应激建立抑郁症大鼠模型。采用苏木精和伊红染色观察大鼠阴茎组织的病理变化。采用酶联免疫吸附法测定血清多巴胺水平。采用western blotting和实时定量逆转录-聚合酶链反应检测相关蛋白和mRNA的表达。结果苏木精、伊红染色显示模型组大鼠阴茎组织病理损伤。模型组大鼠血清多巴胺水平、阴茎组织中多巴胺受体D2 (DRD2)和溶质载体家族6成员3 (SLC6A3)蛋白水平以及DRD2和SLC6A3 mRNA水平均低于对照组。结论抑郁症大鼠勃起功能下降与多巴胺系统及多巴胺能突触信号通路功能障碍有关。
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引用次数: 4
A case of primary hepatic stromal tumour misdiagnosed as a liver cyst 原发性肝间质瘤误诊为肝囊肿1例
Pub Date : 2022-05-01 DOI: 10.1177/03000605221100768
Fei Liu, Si-Hua Wu, Qiang Sun, Sheng-Hai Liu, De-Fa Hou
Primary hepatic stromal tumours are very rare and there are only sporadic reports in the literature. Due to the lack of specificity in their clinical manifestations and imaging features, these tumours are easily misdiagnosed. This current report presents a case of primary liver stromal tumour that was misdiagnosed as a liver cyst. The 72-year-old male patient was admitted to the hospital due to right upper abdomen fullness and discomfort for more than 2 weeks. Colour Doppler ultrasonography and enhanced computed tomography examinations revealed a cystic mass in the right lobe of the liver. The preoperative diagnosis was a liver cyst and the laparoscopic fenestration was performed. The pathological examination demonstrated that it was a primary hepatic stromal tumour. Gastroenteroscopy was performed postoperatively and no lesions were found in the gastrointestinal tract. Imatinib mesylate was given orally as the salvage therapy and a radical operation was planned at the patient's request. This current case serves as a reminder that clinicians should consider the possibility that it could be a primary hepatic stromal tumour rather than a hepatic cyst. A multidisciplinary team is necessary for the diagnosis and treatment of patients with a primary hepatic stromal tumour.
原发性肝间质瘤非常罕见,文献中只有零星的报道。由于临床表现和影像学特征缺乏特异性,这些肿瘤很容易被误诊。本文报告一例原发性肝间质瘤被误诊为肝囊肿。患者男,72岁,因右上腹部充盈不适2周以上入院。彩色多普勒超声和增强计算机断层检查显示肝右叶囊性肿块。术前诊断为肝囊肿,行腹腔镜开窗手术。病理检查证实为原发性肝间质瘤。术后行肠胃镜检查,未见胃肠道病变。口服甲磺酸伊马替尼作为挽救治疗,并应患者要求计划根治性手术。目前的病例提醒临床医生应该考虑它可能是原发性肝间质瘤而不是肝囊肿的可能性。一个多学科的团队是必要的诊断和治疗原发性肝间质瘤患者。
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引用次数: 0
Huge vulvar varicosities in pregnancy: case report and systematic review 妊娠期巨大外阴静脉曲张:病例报告及系统回顾
Pub Date : 2022-05-01 DOI: 10.1177/03000605221097764
Luca Giannella, Michele Montanari, G. Delli Carpini, J. Di Giuseppe, A. Ciavattini
The appearance of severe vulvovaginal varicosities (VVs) is challenging in pregnancy. The management of VVs may require a multidisciplinary approach, including radiologists, vascular surgeons, and obstetricians. We report a rare case of enormous VVs and pubic varicosities and summarize similar cases in the literature. A woman in her 20s with a full-term pregnancy visited our hospital for severe VVs and pubic varicosities. She had been in a spoke maternity unit where a cesarean section was scheduled. After a multidisciplinary evaluation, we offered her the chance to have a vaginal delivery (VD). The woman had an uneventful VD, and VVs disappeared after 40 days. A comprehensive literature search on this topic showed 11 cases of VVs during pregnancy (five VDs and six cesarean sections). The presence of VVs represented the indication for surgery in 70% of cases. Severe complications occurred in 20% of VDs vs. 50% of CSs. In pregnant women with VVs, the risk-benefit ratio suggests a chance of having VD.
严重外阴阴道静脉曲张(VVs)的出现是一个挑战,在怀孕。VVs的管理可能需要多学科的方法,包括放射科医生、血管外科医生和产科医生。我们报告一例罕见的巨大VVs和耻骨变异病例,并总结文献中类似的病例。一名20多岁的足月孕妇因严重静脉曲张和阴部静脉曲张来我院就诊。她一直住在一个预定剖宫产的产科病房。在多学科评估后,我们为她提供了阴道分娩的机会。这名妇女有一个平淡无奇的VD, 40天后VVs消失了。关于这一主题的综合文献检索显示11例妊娠期VVs(5例VDs和6例剖宫产)。在70%的病例中,VVs的存在是手术的指征。严重并发症发生率分别为20%和50%。在有VVs的孕妇中,风险收益比表明有患VD的机会。
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引用次数: 0
Follicular dendritic cell sarcoma of the nasopharynx: a case report and literature review 鼻咽部滤泡树突状细胞肉瘤1例报告并文献复习
Pub Date : 2022-05-01 DOI: 10.1177/03000605221097662
Na Xiao, Shubing Xiao, Wei-Jia Yang
Follicular dendritic cell sarcoma (FDCS) of the nasopharynx is a rare malignant tumor that has been described in only a few case reports, and its differential diagnoses include diverse clinicopathologic entities. FDCS is often initially misdiagnosed, especially when examining small biopsy specimens. We herein report a case of FDCS arising in the nasopharynx that was initially misdiagnosed as a nerve sheath tumor. A 44-year-old woman presented with persistent obstruction of the left nasal cavity and underwent an excisional biopsy. The specimen demonstrated morphologic and immunohistochemical features of FDCS. In situ hybridization for Epstein–Barr virus-encoded RNA was negative. The patient was treated with chemotherapy and radiotherapy. The sarcoma recurred near the original site more than 3 years after the initial treatment and was completely resected. At the time of this writing, the patient had remained disease-free for 1 year after resection. This case is being reported to improve the clinical recognition of FDCS.
鼻咽部滤泡状树突状细胞肉瘤(FDCS)是一种罕见的恶性肿瘤,仅在少数病例报告中被描述,其鉴别诊断包括多种临床病理实体。FDCS最初常常被误诊,特别是在检查小活检标本时。我们在此报告一例发生于鼻咽部的FDCS,最初被误诊为神经鞘肿瘤。一位44岁的女性表现为持续阻塞的左鼻腔,并接受了切除活检。标本表现出FDCS的形态学和免疫组织化学特征。Epstein-Barr病毒编码RNA的原位杂交为阴性。病人接受了化疗和放疗。最初治疗3年后,肉瘤在原发部位附近复发,并被完全切除。在撰写本文时,患者在切除后无病1年。报告本病例是为了提高临床对FDCS的认识。
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引用次数: 1
Subacute Balamuthia mandrillaris encephalitis in an immunocompetent patient diagnosed by next-generation sequencing 新一代测序诊断的免疫能力患者的亚急性曼氏Balamuthia脑炎
Pub Date : 2022-05-01 DOI: 10.1177/03000605221093217
Chang Xu, Xiaoyan Wu, Miaoqin Tan, Dongmei Wang, Shengnan Wang, Yongming Wu
Balamuthia mandrillaris is a free-living heterotrophic amoeba found in soil that causes a rare and usually fatal granulomatous amebic encephalitis. We report an immunocompetent patient infected with B. mandrillaris encephalitis diagnosed by next-generation sequencing (NGS). Clinical manifestations included sudden headache and epilepsy with disturbance of consciousness. The opening pressure of cerebrospinal fluid (CSF) was 220 mmH2O, with mildly elevated white blood cell numbers and elevated protein levels. Cranial magnetic resonance imaging revealed abnormal signals in the right frontal lobe, left parietal lobe, and left occipital lobe. CSF NGS detected B. mandrillaris. Albendazole and metronidazole combined with fluconazole were administered to the patient immediately, but his condition deteriorated and he eventually died. Encephalitis caused by B. mandrillaris is rare and has a high mortality rate. Clinical manifestations are complex and diverse, but early diagnosis is very important for successful treatment. This can be aided by the metagenomic NGS of CSF.
mandrillaris是一种自由生活的异养变形虫,发现于土壤中,引起罕见且通常致命的肉芽肿性阿米巴脑炎。我们报告了一名免疫功能正常的患者,通过下一代测序(NGS)诊断感染了曼氏螺旋体脑炎。临床表现为突发性头痛、癫痫伴意识障碍。脑脊液(CSF)开压220 mmH2O,白细胞数轻度升高,蛋白水平升高。脑磁共振成像显示右额叶、左顶叶和左枕叶有异常信号。脑脊液NGS检测到mandrillaris;患者立即接受阿苯达唑、甲硝唑联合氟康唑治疗,但病情恶化,最终死亡。由山线虫引起的脑炎是一种罕见且死亡率高的疾病。临床表现复杂多样,早期诊断对成功治疗至关重要。这可以通过脑脊液的宏基因组NGS来辅助。
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引用次数: 7
What we are doing to help researchers publish their papers in our journal 我们正在做的是帮助研究人员在我们的期刊上发表论文
Pub Date : 2022-05-01 DOI: 10.1177/03000605221100927
G. Mallarkey, Matthew Thorne
In recent years, the Editors of many medical journals have had to rethink how they check submitted manuscripts. The reason for this is the increasing stream of likely fabricated manuscripts that have been submitted by errant authors directly or via socalled ‘paper mills’. Clever investigative work has revealed the massive extent of the paper-mill and data fabrication problem. Such investigations have led to hundreds of retractions across an array of journals. Editors of respectable scholarly journals (including us at The Journal of International Medical Research (JIMR)) have reviewed and strengthened their checking and peer review steps. However, no system of checks is yet foolproof and paper mills will no doubt continue to try and beat the system. Thus, we can expect organisations such as Retraction Watch to continue its conscientious reporting of historical and new paper-mill papers. While we have introduced many new checks in our peer review and decisionmaking processes, we have also enhanced the steps we take to ensure we can continue to assist researchers as much as possible. This Editorial explains the steps JIMR has taken to detect probable fabricated manuscripts and to aid the publication of genuine research.
近年来,许多医学期刊的编辑不得不重新考虑如何检查提交的手稿。造成这种情况的原因是,越来越多的可能是伪造的手稿是由错误的作者直接或通过所谓的“造纸厂”提交的。聪明的调查工作揭示了造纸厂和数据造假问题的严重程度。这样的调查已经导致了一系列期刊上数百篇论文的撤稿。受人尊敬的学术期刊的编辑(包括我们在《国际医学研究杂志》(JIMR))已经审查并加强了他们的检查和同行评议步骤。然而,没有一种检查系统是万无一失的,造纸厂无疑将继续试图击败这一系统。因此,我们可以期待像撤稿观察这样的组织继续对历史和新的造纸厂论文进行认真的报道。虽然我们在同行评审和决策过程中引入了许多新的检查,但我们也加强了我们采取的步骤,以确保我们能够继续尽可能多地帮助研究人员。这篇社论解释了JIMR为发现可能伪造的手稿和帮助发表真正的研究而采取的步骤。
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引用次数: 0
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The Journal of International Medical Research
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