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2019 Systems and Information Engineering Design Symposium (SIEDS)最新文献

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Deep Learning for Detecting Diseases in Gastrointestinal Biopsy Images 基于深度学习的胃肠道活检图像疾病检测
Pub Date : 2019-04-26 DOI: 10.1109/SIEDS.2019.8735619
Aman Srivastava, S. Sengupta, Sung-Jun Kang, K. Kant, Marium N. Khan, S. A. Ali, S. Moore, B. Amadi, P. Kelly, Sana Syed, Donald E. Brown
Machine learning and computer vision have found applications in medical science and, recently, pathology. In particular, deep learning methods for medical diagnostic imaging can reduce delays in diagnosis and give improved accuracy rates over other analysis techniques. This paper focuses on methods with applicability to automated diagnosis of images obtained from gastrointestinal biopsies. These deep learning techniques for biopsy images may help detect distinguishing features in tissues affected by enteropathies. Learning from different areas of an image, or looking for similar patterns in new images, allow for the development of potential classification or clustering models Techniques like these provide a cutting-edge solution to detecting anomalies. In this paper we explore state of the art deep learning architectures used for the visual recognition of natural images and assess their applicability in medical image analysis of digitized human gastrointestinal biopsy slides.
机器学习和计算机视觉已经在医学和最近的病理学中得到了应用。特别是,用于医学诊断成像的深度学习方法可以减少诊断延迟,并比其他分析技术提供更高的准确率。本文重点研究适用于胃肠道活检图像自动诊断的方法。这些活检图像的深度学习技术可能有助于检测受肠病影响的组织的显著特征。从图像的不同区域学习,或者在新图像中寻找相似的模式,可以开发潜在的分类或聚类模型,这样的技术为检测异常提供了前沿的解决方案。在本文中,我们探索了用于自然图像视觉识别的最先进的深度学习架构,并评估了它们在数字化人体胃肠道活检切片的医学图像分析中的适用性。
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引用次数: 9
Injury Risk Prediction for Body Regions after Motor Vehicle Collisions to Guide CT Scanning Decisions 机动车碰撞后人体区域损伤风险预测指导CT扫描决策
Pub Date : 2019-04-26 DOI: 10.1109/SIEDS.2019.8735610
Jing Sun, Fang You, Bowei Sun, T. Hartka, Abigail A. Flower
Full body computed tomography (CT) is a widely used clinical evaluation method to detect hidden injury for victims of motor vehicle collisions (MVCs). However, full body CT scans are time consuming and expensive for both healthcare service providers and MVC victims. Injury risk prediction models that support CT scanning decisions are therefore highly desired. Existing studies have implemented logistic regression models to predict injury risk for victims' major body regions, including head, neck, chest, abdomen/pelvis, cervical spine, thoracic spine and lumbar spine. The work presented here involved the application of novel approaches to improve the prediction results. This study focused on examining patient information and crash data for front seat adult passengers using data from the National Automotive Sampling System - Crashworthiness Data System from 2000 to 2015. This dataset is imbued with a large amount of missingness and is highly imbalanced. Various imputation methods were employed in order to preserve the greatest amount of relevant historical data possible. The high imbalance in the data was resolved by the implementation of downsampling and synthetic minority over-sampling technique. Models that were applied in this study include logistic regression, random forests, support vector machines and gradient boosting. Autoencoders were also deployed to generate features of high importance to improve prediction results. The resulting models for all seven regions yielded sensitivities and specificities of at least 96% and 30%, respectively. Overall, these models were developed not to replace physicians' decisions, but to guide their CT scanning decisions.
全身计算机断层扫描(CT)是一种广泛应用于机动车碰撞受害者隐性损伤检测的临床评估方法。然而,对于医疗服务提供者和MVC受害者来说,全身CT扫描既耗时又昂贵。因此,支持CT扫描决策的损伤风险预测模型是非常需要的。已有研究采用logistic回归模型预测受害者主要身体部位的损伤风险,包括头部、颈部、胸部、腹部/骨盆、颈椎、胸椎和腰椎。这里提出的工作涉及应用新方法来改进预测结果。本研究的重点是检查前座成年乘客的患者信息和碰撞数据,使用的数据来自2000年至2015年的国家汽车抽样系统-耐撞数据系统。该数据集充满了大量的缺失,并且高度不平衡。为了尽可能多地保留相关的历史数据,采用了各种各样的归算方法。采用降采样和合成少数派过采样技术解决了数据高度不平衡的问题。在本研究中应用的模型包括逻辑回归、随机森林、支持向量机和梯度增强。还部署了自动编码器来生成高度重要的特征,以提高预测结果。所有七个地区的结果模型分别产生至少96%和30%的敏感性和特异性。总的来说,这些模型不是为了取代医生的决策,而是为了指导他们的CT扫描决策。
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引用次数: 0
Modeling User Context from Smartphone Data for Recognition of Health Status 从智能手机数据建模用户上下文以识别健康状态
Pub Date : 2019-04-26 DOI: 10.1109/SIEDS.2019.8735626
Rohan M. Karanth, Matthew S. Guyer, Natalie L. Twilley, Mary Boyd Crosier, S. C. Monroe, Alex J. McQuain, Lynn T. Kha, M. Boukhechba, M. Gerber, Laura E. Barnes
Recent advances in sensing technology have made it possible to monitor how behavioral systems unfold in people's natural settings by leveraging sensors embedded in personal smartphones and other smart devices. This paper provides a framework for how smartphone sensor data can be collected, cleaned, and modeled to predict relevant disease contexts such as location. These variables can then be used in context-sensitive models to understand how a user's behavior and contexts might differ from typical patterns when impacted by illness. To develop rich contextual models, we first conducted a 2-week smartphone monitoring study where sensor data and corresponding location contexts were tagged for 7 users. Next, we demonstrated how multimodal sensor data can be used to predict location context by modeling the tagged dataset and analyzing differences in sensors to find indicators for each location. The results of this effort include 1) identification of ground truth data for contexts of interest to be used in future modeling, 2) establishment of a process to collect, clean, and visualize smartphone data generated by both iOS and Android systems, and 3) creation of models to predict a participant's location and context using raw smartphone data. This context identification process could be used in future research to perform analyses that leverage past patterns of user behavior to recognize disease indicators.
传感技术的最新进展使得利用嵌入在个人智能手机和其他智能设备中的传感器,监测人们在自然环境中的行为系统如何展开成为可能。本文为智能手机传感器数据的收集、清理和建模提供了一个框架,以预测相关的疾病背景,如位置。然后,可以在上下文敏感模型中使用这些变量,以了解受疾病影响时用户的行为和上下文可能与典型模式有何不同。为了开发丰富的上下文模型,我们首先进行了为期两周的智能手机监测研究,其中为7名用户标记了传感器数据和相应的位置上下文。接下来,我们演示了如何使用多模态传感器数据来预测位置上下文,方法是对标记数据集进行建模,并分析传感器的差异,以找到每个位置的指标。这项工作的结果包括:1)为未来建模中使用的感兴趣的上下文识别地面真实数据;2)建立一个过程来收集、清理和可视化由iOS和Android系统生成的智能手机数据;3)创建模型来使用原始智能手机数据预测参与者的位置和上下文。这种背景识别过程可以在未来的研究中使用,以执行利用过去用户行为模式来识别疾病指标的分析。
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引用次数: 1
Bi-directional Relevance Matching between Medical Corpora 医学语料库的双向关联匹配
Pub Date : 2019-04-26 DOI: 10.1109/SIEDS.2019.8735639
Jingnan Yang, Justin Ward, Erfaneh Gharavi, Jennifer Dawson, Raf Alvarado
Readily available, trustworthy, and usable medical information is vital to promoting global health. Cochrane is a non-profit medical organization that conducts and publishes systematic reviews of medical research findings. Over 3000 Cochrane Reviews are presently used as evidence in Wikipedia articles. Currently, Cochrane's researchers manually search Wikipedia pages related to medicine in order to identify Wikipedia articles that can be improved with Cochrane evidence. Our aim is to streamline this process by applying existing document similarity and information retrieval methods to automatically link Wikipedia articles and Cochrane Reviews. Potential challenges to this project include document length and the specificity of the corpora. These challenges distinguish this problem from ordinary document representation and retrieval problems. For our methodology, we worked with data from 7400 Cochrane Reviews, ranging from one to several pages in length, and 33,000 Wikipedia articles categorized as medical. We explored different methods of document vectorization including TFIDF, LDA, LSA, word2Vec, and doc2Vec. For every document in both corpora, their similarity to each document in the opposing set was calculated using established vector similarity metrics such as cosine similarity and KL-divergence. Labeled data for this unsupervised task was not available. Models were evaluated by comparing the results to two standards: (1) Cochrane Reviews currently cited in Wikipedia articles and (2) a data set provided by a medical expert that indicates which Cochrane Reviews could be considered for specific Wikipedia articles. Our system performs best using TFIDF document representation and cosine similarity.
随时可用、值得信赖和可用的医疗信息对促进全球健康至关重要。Cochrane是一家非营利性医疗组织,负责对医学研究结果进行系统评论并发表评论。目前,超过3000篇Cochrane评论被用作维基百科文章的证据。目前,Cochrane的研究人员手动搜索维基百科中与医学相关的页面,以确定可以用Cochrane证据改进的维基百科文章。我们的目标是通过应用现有的文档相似度和信息检索方法来自动链接维基百科文章和Cochrane评论,从而简化这一过程。这个项目的潜在挑战包括文档长度和语料库的特殊性。这些挑战将这个问题与普通的文档表示和检索问题区别开来。在我们的方法中,我们使用了7400篇Cochrane评论的数据,长度从一页到几页不等,以及33000篇维基百科上被归类为医学的文章。我们探索了不同的文档矢量化方法,包括TFIDF、LDA、LSA、word2Vec和doc2Vec。对于两个语料库中的每个文档,使用已建立的向量相似性度量(如余弦相似性和kl -散度)计算它们与对立集中每个文档的相似性。此无监督任务的标记数据不可用。通过将结果与两个标准进行比较来评估模型:(1)目前在维基百科文章中引用的Cochrane评论;(2)医学专家提供的数据集,表明哪些Cochrane评论可以被考虑用于特定的维基百科文章。我们的系统使用TFIDF文档表示和余弦相似度表现最好。
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引用次数: 1
An Application of Data Mining in the Fourth Industrial Revolution - A Case of South Africa 数据挖掘在第四次工业革命中的应用——以南非为例
Pub Date : 2019-04-26 DOI: 10.1109/SIEDS.2019.8735627
T. A. Malapane
This research paper explores the in-depth application of Data Mining in the Fourth Industrial Revolution (4IR) in South Africa. The Industrial Revolution concept has fundamentally changed our society and economy. In South Africa, data mining phenomena has not been fully realized in the age of the 4IR. In the age of information and 4IR data is viewed as a strategic assert that companies should invest in. Results in this study shows that the concept of data mining in South African business landscape is not fully executed and applied to business development and management as a practice. Statistical observations also indicate that baselines, historical data and intelligence if used properly can benefit businesses to grow and develop. This study attempted to discover hidden valuable knowledge by analyzing data using statistical data mining techniques during which a new data mining technique to analyze data, interpret it and present it was discovered. This research tested the new approach referred to as Alex Malapane Data Mining Technique (AMDMT) using test questions which were explored as per the objective of this study.
本文探讨了数据挖掘在南非第四次工业革命(4IR)中的深入应用。工业革命的概念从根本上改变了我们的社会和经济。在南非,数据挖掘现象在第四次工业革命时代还没有完全实现。在信息和第四次工业革命时代,数据被视为企业应该投资的战略主张。本研究的结果表明,数据挖掘的概念在南非的商业环境中没有得到充分的执行,也没有作为一种实践应用到商业发展和管理中。统计观察还表明,如果使用得当,基线、历史数据和情报可以有利于企业的成长和发展。本研究试图利用统计数据挖掘技术对数据进行分析,发现隐藏的有价值的知识。在此过程中,发现了一种新的数据挖掘技术来分析、解释和呈现数据。本研究测试了被称为Alex Malapane数据挖掘技术(AMDMT)的新方法,使用了根据本研究目标探索的测试问题。
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引用次数: 0
Risk Analysis Framework for Cyber Security and Critical Infrastructure Protection of the US Electric Power Grid 美国电网网络安全和关键基础设施保护风险分析框架
Pub Date : 2019-04-26 DOI: 10.1109/SIEDS.2019.8735651
Sean S Baggott, J. Santos
The purpose of this article is to introduce a risk analysis framework to enhance the cyber security of and to protect the critical infrastructure of the electric power grid of the United States. Building on the fundamental questions of risk assessment and management, this framework aims to advance the current risk analysis discussions pertaining to the electric power grid. Most of the previous risk-related studies on the electric power grid focus mainly on the recovery of the network from hurricanes and other natural disasters. In contrast, a disproportionately small number of studies explicitly investigate the vulnerability of the electric power grid to cyber-attack scenarios, and how they could be prevented or mitigated. Such a limited approach leaves the United States vulnerable to foreign and domestic threats (both state-sponsored and “lone wolf”) to infiltrate a network that lacks a comprehensive security environment or coordinated government response. By conducting a review of the literature and presenting a risk-based framework, this article underscores the need for a coordinated United States cyber security effort toward formulating strategies and responses conducive to protecting the nation against attacks on the electric power grid.
本文旨在介绍一种风险分析框架,以增强美国电网的网络安全并保护其关键基础设施。基于风险评估和管理的基本问题,本框架旨在推进当前与电网相关的风险分析讨论。以往对电网风险的研究大多集中在飓风等自然灾害后电网的恢复问题上。相比之下,很少有研究明确地调查了电网对网络攻击的脆弱性,以及如何预防或减轻网络攻击。这种有限的方法使美国容易受到国内外威胁(包括国家支持和“独狼”)的影响,从而渗透到缺乏全面安全环境或协调政府反应的网络。通过对文献进行回顾并提出基于风险的框架,本文强调需要协调一致的美国网络安全努力,以制定有利于保护国家免受电网攻击的战略和响应。
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引用次数: 5
Developing a data pipeline to improve accessibility and utilization of Charlottesville's Open Data Portal 开发数据管道,以提高夏洛茨维尔开放数据门户的可访问性和利用率
Pub Date : 2019-04-26 DOI: 10.1109/SIEDS.2019.8735653
L. Beane, Elena Gillis, Raf Alvarado, C. Wylie
To improve democratic engagement between the people and the government, the city of Charlottesville put forward a proposition to construct an online portal that would contain data from the city departments that is considered public by nature. This move was intended to promote the ease of access to data pertinent to ongoing policy debates in the city and incentivize the public to contribute to the policy-making process with informed participation. Such efforts, while successful at their start, have gradually stagnated, and the end objective of the portal has not been reached. In this paper we identify possible reasons for this stagnation – inconsistent formatting of the datasets, variables that are not meant for human legibility, and limited data with disproportional representation from the city departments. We then propose a data pipeline that serves as a tool to extract utility from the data. It does so by converting the datasets into a consistent format, merges the datasets, and allows for creation of simple visualizations. The pipeline acts as a link between the raw data published by the government units and the city by increasing its interpretability and legibility and outputting results that are easily relatable to the policy issues at hand. We demonstrate this by analyzing datasets for crime and real estate and relating our findings to the affordable housing debate.
为了提高人民与政府之间的民主参与,夏洛茨维尔市提出了建立一个在线门户网站的建议,该门户网站将包含被认为是公共性质的城市部门的数据。此举旨在促进城市中正在进行的政策辩论相关数据的获取,并激励公众在知情参与的情况下为政策制定过程做出贡献。这种努力虽然在开始时取得了成功,但已逐渐停滞不前,门户的最终目标尚未实现。在本文中,我们确定了这种停滞的可能原因-数据集格式不一致,变量不适合人类易读性,以及来自城市部门的不成比例代表性的有限数据。然后,我们提出了一个数据管道,作为从数据中提取实用程序的工具。它通过将数据集转换为一致的格式、合并数据集并允许创建简单的可视化来实现这一点。该管道作为政府单位和城市发布的原始数据之间的联系,增加了其可解释性和可读性,并输出了与手头的政策问题容易相关的结果。我们通过分析犯罪和房地产的数据集,并将我们的发现与经济适用房的辩论联系起来,来证明这一点。
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引用次数: 0
Field Test of Wearable Sensors for Hydration Monitoring 水化监测可穿戴传感器的现场试验
Pub Date : 2019-04-26 DOI: 10.1109/SIEDS.2019.8735637
David J. Culver, Alexander B. Colon, Deanna R. Washington, Maurice G. Appleton, A. Strang, A. Alizadeh, A. Burns, M. Poliks, Chad C. Tossell
Wearable sweat sensors will soon launch in the commercial sector. Many of these sensors focus on hydration monitoring, which is critical for optimizing performance and ensuring safety; particularly as it relates to individuals participating in extremely demanding physical activities. For these reasons, we tested the, durability, and comfort of a prototype sweat sensor in a mock special operations field event. Data were collected at the U.S. Air Force Academy to include measures of hydration levels (e.g., Urine Specific Gravity) and fluid loss (e.g., body weight) across a series of five strenuous physical activities. We evaluated the prototype design in terms of comfort and intrusiveness. Observations and survey data revealed the participants did not perceive the technologies as intrusive. All of the requisite activities were completed and the technologies did not hinder performance. General Electric, the developers of the particular sensor evaluated, received important design-related information for future iterations. With this technology the U.S. military hopes to see a decrease in the number of heat and hydration related incidents by enhancing the safety of its personnel. Moreover, the future design of this system is critical as part of a physiological dashboard used by special operations forces. A combination of optimizing human performance and safety could create the next iteration of the world's most powerful ground forces.
可穿戴式汗液传感器将很快在商业领域推出。这些传感器中的许多都专注于水合监测,这对于优化性能和确保安全至关重要;特别是当它涉及到个人参加极其苛刻的体力活动。出于这些原因,我们在模拟特种作战现场事件中测试了原型汗液传感器的耐用性和舒适性。数据是在美国空军学院收集的,包括在一系列五种剧烈体育活动中测量水合水平(如尿比重)和液体损失(如体重)。我们从舒适性和侵入性两方面对原型设计进行了评估。观察和调查数据显示,参与者并不认为这些技术具有侵入性。所有必要的活动都已完成,这些技术并没有妨碍作业。通用电气,这个特殊传感器的开发者,收到了重要的设计相关信息,用于未来的迭代。有了这项技术,美国军方希望通过提高其人员的安全性来减少与高温和水合作用有关的事件的数量。此外,作为特种作战部队使用的生理仪表盘的一部分,该系统的未来设计至关重要。优化人员表现和安全的结合可以创造出世界上最强大的地面部队的下一代。
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引用次数: 1
Development of an Autonomous Agricultural Vehicle to Measure Soil Respiration 一种测量土壤呼吸的自动农用车辆的研制
Pub Date : 2019-04-26 DOI: 10.1109/SIEDS.2019.8735598
Haley Finegan, Seth Jaffe, Angela Leon, Kim Lytle, Edward Morgan, Charlotte Greene, Anne Meyer, B. Brinkman, S. D. De Wekker, H. Yochum, N. Bezzo, G. Lewin
Soil respiration (SR), the carbon dioxide flux produced by organisms in soil, is not well quantified and understood compared to other soil characteristics. Currently, environmental scientists collect SR data either by manually taking measurements in the field, which is time intensive, or by receiving information from permanently placed sensors, which limits the locations where data is collected. This project aims to provide an efficient means of collecting spatially diverse data for environmental research and agricultural monitoring by designing and constructing an autonomous ground vehicle that can navigate to specific points of interest, collect SR and other ambient atmospheric measurements, and transmit the data remotely to a base station. To do so, the robot relies on a variety of subsystems including the robot's frame, differential steering, a mechanical arm that deploys an array of ground sensors, a radio network, and on-board temperature, pressure, humidity, wind speed, and GPS ambient atmospheric sensors. The vehicle will use the Robot Operating System (ROS) along with GPS, motion planning, and LIDAR to navigate between user-specified sampling locations while avoiding obstacles, which will minimize the need for human labor and allow more areas to be visited for data collection as compared to permanently placed sensors. The proposed autonomous system will help environmental scientists and agricultural managers collect and analyze soil data in the field.
土壤呼吸(SR)是土壤中生物产生的二氧化碳通量,与其他土壤特征相比,土壤呼吸(SR)尚未得到很好的量化和理解。目前,环境科学家收集SR数据的方式,要么是在现场手工测量,要么是从永久放置的传感器接收信息,这限制了收集数据的位置。该项目旨在通过设计和建造一种自主地面车辆,为环境研究和农业监测提供一种有效的收集空间多样化数据的方法,该车辆可以导航到特定的兴趣点,收集SR和其他环境大气测量数据,并将数据远程传输到基站。为了做到这一点,机器人依赖于各种子系统,包括机器人的框架、差动转向、部署一系列地面传感器的机械臂、无线电网络、机载温度、压力、湿度、风速和GPS环境大气传感器。该车辆将使用机器人操作系统(ROS)以及GPS、运动规划和激光雷达在用户指定的采样位置之间导航,同时避开障碍物,这将最大限度地减少对人力的需求,并且与永久放置的传感器相比,可以访问更多区域进行数据收集。该自主系统将帮助环境科学家和农业管理者收集和分析田间土壤数据。
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引用次数: 4
Direct Potable Reuse Systems Risk Analysis 直接饮用水再利用系统风险分析
Pub Date : 2019-04-01 DOI: 10.1109/SIEDS.2019.8735595
D. Bernheimer, Tala Feda, C. Pallaria, Ashley Schnarrs
Drinking water is vital for the functioning of society; hence, municipalities are tasked with providing and exploring sources for adequate potable water. Increasing population and changes in climate have strained water supplies around the world, leaving more communities to explore alternative means of supplying potable water beyond the traditional sources. One of these alternatives is Direct Potable Reuse, or DPR, which is a closed system, recycling wastewater from homes and its community, cleaning the water, and reintroducing it back into the potable water supply. Since DPR systems are new, it is important to ensure that a DPR system is capable to perform with a high level of reliability. This project analyzes DPR advanced water treatment systems to check the mechanical reliability of the system and its components. Several types of methodologies are used to model and predict the system's risk behavior, such as Expert Judgement, Failure Modes and Effects Analysis, and Event Trees Analysis. Through analysis of the advanced water treatment process, the more vulnerable or higher liability components and processes can be identified. The purpose of this analysis is to reduce risk in future iterations of water treatment facilities, coupled with suggested risk mitigation strategies developed through the detailing and analysis of the treatment processes. The information provided by this project may be useful to decision makers when designing and implementing new DPR systems, and when maintaining and improving existing DPR systems.
饮用水对社会的运转至关重要;因此,市政当局的任务是提供和探索充足的饮用水源。人口增长和气候变化使世界各地的水供应紧张,迫使更多的社区探索传统水源以外的其他供应饮用水的方法。其中一种替代方案是直接饮用水再利用,简称DPR,这是一个封闭的系统,回收家庭和社区的废水,清洁水,然后将其重新引入饮用水供应。由于DPR系统是新系统,因此确保DPR系统能够以高可靠性执行非常重要。本项目对DPR高级水处理系统进行分析,检查系统及其部件的机械可靠性。几种类型的方法被用来建模和预测系统的风险行为,如专家判断,失效模式和影响分析,以及事件树分析。通过对高级水处理工艺的分析,可以识别出较为脆弱或责任较高的组分和工艺。这一分析的目的是减少今后重复使用水处理设施时的风险,并结合通过详细分析处理过程拟订的建议风险缓解战略。在设计和实施新的民防系统,以及维护和改进现有民防系统时,本项目提供的资料可能对决策者有用。
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引用次数: 0
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2019 Systems and Information Engineering Design Symposium (SIEDS)
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