首页 > 最新文献

2021 Sixth International Conference on Advances in Biomedical Engineering (ICABME)最新文献

英文 中文
Texture Analysis of Brain MR Images for Age Detection 用于年龄检测的脑磁共振图像纹理分析
Pub Date : 2021-10-07 DOI: 10.1109/ICABME53305.2021.9604841
Freddy Al-Hazzouri, Farah Bazzi, Ahmad Diab
This study investigates the use of textural features and texture maps in building a brain age prediction model using two publicly available datasets (IXI and OASIS), also the usage of texture maps to calculate the brain age delta and use it as a biomarker of dementia and investigate accelerated aging for demented subjects.
本研究使用两个公开可用的数据集(IXI和OASIS),研究了纹理特征和纹理图在构建脑年龄预测模型中的使用,以及使用纹理图计算脑年龄delta并将其用作痴呆的生物标志物,并研究痴呆受试者的加速衰老。
{"title":"Texture Analysis of Brain MR Images for Age Detection","authors":"Freddy Al-Hazzouri, Farah Bazzi, Ahmad Diab","doi":"10.1109/ICABME53305.2021.9604841","DOIUrl":"https://doi.org/10.1109/ICABME53305.2021.9604841","url":null,"abstract":"This study investigates the use of textural features and texture maps in building a brain age prediction model using two publicly available datasets (IXI and OASIS), also the usage of texture maps to calculate the brain age delta and use it as a biomarker of dementia and investigate accelerated aging for demented subjects.","PeriodicalId":294393,"journal":{"name":"2021 Sixth International Conference on Advances in Biomedical Engineering (ICABME)","volume":"10 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"122758110","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
FSI Model to Investigate Effects of Covering Material on Invasive Blood Pressure Sensor Performance FSI模型研究覆盖材料对有创血压传感器性能的影响
Pub Date : 2021-10-07 DOI: 10.1109/ICABME53305.2021.9604856
Jumana Eyadeh, T. Salameh, Areej Alshurman, Roa'a Alakkish, A. Al-Zaben
In general, many of the in vivo measurements taken inside the body have direct contact with body fluids and most importantly, blood. Biocompatibility is required to prevent any adverse effects that may result from this interaction. On the other hand, optimal performance of the medical device is also a concern. For Example, the performance of invasive solid-state blood pressure sensors may be affected by the packaging materials used to achieve biocompatibility.This paper investigates the effect of different packaging biomaterials with different thicknesses on the solid-state blood pressure sensor response under dynamic measurement. Using fluid-structure interaction formulism, finite element analysis is used to explore the effect of the packaging material on the sensor’s response. In addition, a comparison of the different biomaterials effects is presented to enable designers to select the optimal configuration.
一般来说,许多在体内进行的测量都与体液,最重要的是与血液直接接触。为了防止这种相互作用可能产生的任何不良反应,需要生物相容性。另一方面,医疗器械的最佳性能也是一个问题。例如,侵入式固态血压传感器的性能可能会受到用于实现生物相容性的包装材料的影响。本文研究了不同厚度的包装生物材料对动态测量下固态血压传感器响应的影响。利用流固耦合公式,采用有限元分析方法探讨了封装材料对传感器响应的影响。此外,还比较了不同生物材料的效果,使设计人员能够选择最佳配置。
{"title":"FSI Model to Investigate Effects of Covering Material on Invasive Blood Pressure Sensor Performance","authors":"Jumana Eyadeh, T. Salameh, Areej Alshurman, Roa'a Alakkish, A. Al-Zaben","doi":"10.1109/ICABME53305.2021.9604856","DOIUrl":"https://doi.org/10.1109/ICABME53305.2021.9604856","url":null,"abstract":"In general, many of the in vivo measurements taken inside the body have direct contact with body fluids and most importantly, blood. Biocompatibility is required to prevent any adverse effects that may result from this interaction. On the other hand, optimal performance of the medical device is also a concern. For Example, the performance of invasive solid-state blood pressure sensors may be affected by the packaging materials used to achieve biocompatibility.This paper investigates the effect of different packaging biomaterials with different thicknesses on the solid-state blood pressure sensor response under dynamic measurement. Using fluid-structure interaction formulism, finite element analysis is used to explore the effect of the packaging material on the sensor’s response. In addition, a comparison of the different biomaterials effects is presented to enable designers to select the optimal configuration.","PeriodicalId":294393,"journal":{"name":"2021 Sixth International Conference on Advances in Biomedical Engineering (ICABME)","volume":"44 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128741353","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Usefulness of Functional MRI Textures in the Evaluation of Renal Function 功能性MRI结构在肾功能评价中的作用
Pub Date : 2021-10-07 DOI: 10.1109/ICABME53305.2021.9604879
Israa Alnazer, O. Falou, T. Urruty, P. Bourdon, C. Guillevin, Mathieu Naudin, Mohamad Khalil, Ahmad Shahin, C. Fernandez-Maloigne
Non-invasive assessment of kidney function and structure remains of clinical importance in the diagnosis and prognosis of chronic kidney disease. This work aims to evaluate the role of textures extracted from functional magnetic resonance imaging in renal dysfunction detection by differentiating healthy and chronic kidney disease patients. Textural descriptors are extracted from apparent diffusion coefficient, blood oxygenation level dependent images and T2 maps. Synthetic resampling technique is performed to account for imbalanced classes and increase the variety of sample domain. Principal component analysis projection is applied to eliminate irrelevant features and compact the dataset. The performance of linear discriminant analysis, logistic regression and Naïve Bayes classifiers in terms of discriminating healthy and affected kidney is evaluated. The results of this preliminary study support the fact that chronic kidney disease affects texture parameters significantly. Textures-based predictive models have shown promise in accurate and safe renal function evaluation (accuracy, sensitivity and AUC up to 98%, 98% and 1 respectively).
无创评估肾脏功能和结构在慢性肾脏疾病的诊断和预后中仍然具有重要的临床意义。本研究旨在评估从功能磁共振成像中提取的纹理在鉴别健康和慢性肾脏疾病患者的肾功能障碍检测中的作用。从表观扩散系数、血氧水平相关图像和T2图中提取纹理描述符。采用合成重采样技术,解决了类不平衡的问题,增加了采样域的多样性。采用主成分分析投影剔除不相关特征,压缩数据集。评估了线性判别分析、逻辑回归和Naïve贝叶斯分类器在区分健康肾脏和病变肾脏方面的性能。本初步研究结果支持慢性肾脏疾病显著影响肌理参数的事实。基于纹理的预测模型在准确和安全的肾功能评估中显示出前景(准确性、灵敏度和AUC分别高达98%、98%和1)。
{"title":"Usefulness of Functional MRI Textures in the Evaluation of Renal Function","authors":"Israa Alnazer, O. Falou, T. Urruty, P. Bourdon, C. Guillevin, Mathieu Naudin, Mohamad Khalil, Ahmad Shahin, C. Fernandez-Maloigne","doi":"10.1109/ICABME53305.2021.9604879","DOIUrl":"https://doi.org/10.1109/ICABME53305.2021.9604879","url":null,"abstract":"Non-invasive assessment of kidney function and structure remains of clinical importance in the diagnosis and prognosis of chronic kidney disease. This work aims to evaluate the role of textures extracted from functional magnetic resonance imaging in renal dysfunction detection by differentiating healthy and chronic kidney disease patients. Textural descriptors are extracted from apparent diffusion coefficient, blood oxygenation level dependent images and T2 maps. Synthetic resampling technique is performed to account for imbalanced classes and increase the variety of sample domain. Principal component analysis projection is applied to eliminate irrelevant features and compact the dataset. The performance of linear discriminant analysis, logistic regression and Naïve Bayes classifiers in terms of discriminating healthy and affected kidney is evaluated. The results of this preliminary study support the fact that chronic kidney disease affects texture parameters significantly. Textures-based predictive models have shown promise in accurate and safe renal function evaluation (accuracy, sensitivity and AUC up to 98%, 98% and 1 respectively).","PeriodicalId":294393,"journal":{"name":"2021 Sixth International Conference on Advances in Biomedical Engineering (ICABME)","volume":"16 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114117711","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Fully Automatic Detection of Premature Ventricular Contractions: A New Approach Based On Unsupervised Learning 全自动检测室性早搏:一种基于无监督学习的新方法
Pub Date : 2021-10-07 DOI: 10.1109/ICABME53305.2021.9604830
Khouloud Lobnan Issa, Abbas Rammal, Ahmad Rammal, M. Ayache
Premature Ventricular Contractions (PVCs), a common type of cardiac arrhythmia, can be identified by analyzing electrocardiogram (ECG) signals. If not treated on time, PVCs become life-threatening. In this paper, a high-performance approach is proposed for detecting PVCs in an unsupervised manner. The main objective is to perform an automatic PVCs detection in ECG without prior knowledge. Ten different statistical features are extracted to represent various characteristics of the signal. Thereafter, the proposed approach explores PVCs detection by two different strategies. Performance evaluation results over the MIT-BIH Arrhythmia Database (MIT-BIH-AD) show that the strategy based on Agglomerative Hierarchical Clustering (AHC) Method outperforms K-means Clustering Method with an average Accuracy (ACC), Specificity (SPE), Sensitivity (SEN), and Positive Predictive Value (PPV) of 98.43%, 99.23%, 94.47%, and 96.67%, respectively. With less complexity and computation load, AHC can be an accurate candidate for PVCs detection to be used in clinical applications.
室性早搏(早搏)是一种常见的心律失常,可以通过分析心电图(ECG)信号来识别。如果不及时治疗,室性心动过速会危及生命。本文提出了一种高性能的无监督检测pvc的方法。主要目的是在没有先验知识的情况下,对心电进行室性早搏的自动检测。提取10种不同的统计特征来表示信号的各种特征。然后,该方法通过两种不同的策略探索了室性早搏的检测。基于MIT-BIH心律失常数据库(MIT-BIH- ad)的性能评估结果显示,基于AHC方法的策略优于K-means聚类方法,其平均准确率(ACC)、特异性(SPE)、灵敏度(SEN)和阳性预测值(PPV)分别为98.43%、99.23%、94.47%和96.67%。AHC具有较低的复杂性和较低的计算量,可作为临床应用中检测室性早搏的准确候选方法。
{"title":"Fully Automatic Detection of Premature Ventricular Contractions: A New Approach Based On Unsupervised Learning","authors":"Khouloud Lobnan Issa, Abbas Rammal, Ahmad Rammal, M. Ayache","doi":"10.1109/ICABME53305.2021.9604830","DOIUrl":"https://doi.org/10.1109/ICABME53305.2021.9604830","url":null,"abstract":"Premature Ventricular Contractions (PVCs), a common type of cardiac arrhythmia, can be identified by analyzing electrocardiogram (ECG) signals. If not treated on time, PVCs become life-threatening. In this paper, a high-performance approach is proposed for detecting PVCs in an unsupervised manner. The main objective is to perform an automatic PVCs detection in ECG without prior knowledge. Ten different statistical features are extracted to represent various characteristics of the signal. Thereafter, the proposed approach explores PVCs detection by two different strategies. Performance evaluation results over the MIT-BIH Arrhythmia Database (MIT-BIH-AD) show that the strategy based on Agglomerative Hierarchical Clustering (AHC) Method outperforms K-means Clustering Method with an average Accuracy (ACC), Specificity (SPE), Sensitivity (SEN), and Positive Predictive Value (PPV) of 98.43%, 99.23%, 94.47%, and 96.67%, respectively. With less complexity and computation load, AHC can be an accurate candidate for PVCs detection to be used in clinical applications.","PeriodicalId":294393,"journal":{"name":"2021 Sixth International Conference on Advances in Biomedical Engineering (ICABME)","volume":"13 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123425907","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
CoBra: Towards Adaptive Robotized Prostate Brachytherapy under MRI Guidance CoBra:在MRI引导下的自适应机器人前列腺近距离治疗
Pub Date : 2021-10-07 DOI: 10.1109/ICABME53305.2021.9604818
Sepaldeep Singh Dhaliwal, A. Belarouci, Mario Sanz Lopez, Fabien Verbrugghe, Othman Lakhal, G. Dherbomez, T. Chettibi, R. Merzouki
This paper presents a novel concept for robotized adaptive prostate Brachytherapy (BT) under Magnetic Resonance Imaging (MRI). The Cooperative Brachytherapy (CoBra) concept with compact modular design robot-guide is capable of serving mount of Low Dose Rate (LDR-BT), High Dose Rate (HDR-BT), and Biopsy modules and operate in-bore 3 Tesla MRI. CoBra integrates the multi-components - radiotherapy, imaging, needle, robot-guide as one global system. CoBra MR-robot is a 5 degrees-of-freedom, actuated using non-magnetic piezo-ultrasonic motors. CoBra Robot intends to place BT seeds to the patient positioned in-bore in lithotomy under MRI-feedback control for the purpose of adaptive brachytherapy. The robot is capable of posing biopsy and BT needle modules for both straight and oblique orientation. It is controlled with an absolute sensor for position sensing. The paper presents recent advances in designing a robotic system for adaptive tumor-targeting in-bore intraoperatively under real-time MRI.
本文提出了一种基于磁共振成像(MRI)的机器人自适应前列腺近距离放射治疗(BT)的新概念。协同近距离治疗(CoBra)概念与紧凑的模块化设计机器人指南,能够服务安装低剂量率(LDR-BT),高剂量率(HDR-BT)和活检模块,并在3特斯拉MRI内操作。CoBra集成了多个组件-放射治疗,成像,针,机器人引导作为一个全局系统。CoBra MR-robot是一个5自由度的机器人,使用非磁性压电超声电机驱动。CoBra机器人打算在mri反馈控制下,将BT种子放置在取石术中定位的患者体内,以达到适应性近距离治疗的目的。该机器人能够将活检和BT针模块放置在垂直和倾斜方向。它是由一个绝对传感器控制的位置传感。本文介绍了一种在实时MRI下术中自适应肿瘤靶向机器人系统的最新进展。
{"title":"CoBra: Towards Adaptive Robotized Prostate Brachytherapy under MRI Guidance","authors":"Sepaldeep Singh Dhaliwal, A. Belarouci, Mario Sanz Lopez, Fabien Verbrugghe, Othman Lakhal, G. Dherbomez, T. Chettibi, R. Merzouki","doi":"10.1109/ICABME53305.2021.9604818","DOIUrl":"https://doi.org/10.1109/ICABME53305.2021.9604818","url":null,"abstract":"This paper presents a novel concept for robotized adaptive prostate Brachytherapy (BT) under Magnetic Resonance Imaging (MRI). The Cooperative Brachytherapy (CoBra) concept with compact modular design robot-guide is capable of serving mount of Low Dose Rate (LDR-BT), High Dose Rate (HDR-BT), and Biopsy modules and operate in-bore 3 Tesla MRI. CoBra integrates the multi-components - radiotherapy, imaging, needle, robot-guide as one global system. CoBra MR-robot is a 5 degrees-of-freedom, actuated using non-magnetic piezo-ultrasonic motors. CoBra Robot intends to place BT seeds to the patient positioned in-bore in lithotomy under MRI-feedback control for the purpose of adaptive brachytherapy. The robot is capable of posing biopsy and BT needle modules for both straight and oblique orientation. It is controlled with an absolute sensor for position sensing. The paper presents recent advances in designing a robotic system for adaptive tumor-targeting in-bore intraoperatively under real-time MRI.","PeriodicalId":294393,"journal":{"name":"2021 Sixth International Conference on Advances in Biomedical Engineering (ICABME)","volume":"15 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123344454","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Speech Command Recognition Using Deep Learning 使用深度学习的语音命令识别
Pub Date : 2021-10-07 DOI: 10.1109/ICABME53305.2021.9604862
M. Ayache, Hussien Kanaan, Kawthar Kassir, Yasser Kassir
Speech Recognition Software is a computer program that is trained to take the input of human speech, interpret it, and transcribe it into text. Most recently, the field has benefited from advances in deep learning and big data. The advances are evidenced not only by the surge of academic papers published in the field, but more importantly by the worldwide industry adoption of a variety of deep learning methods in designing and deploying speech recognition systems. The objective of this paper is to propose an advanced and accurate end-user software system that is able to recognize specific commands to control a robot to perform specified tasks in a hospital. This model will be based on Deep Learning since it is effective in models having huge data as for the two versions of Google TensorFlow and AIY datasets used in our model. Convolutional neural network will be used since it is able to extract features from the dataset instead of traditional methods of feature extraction, thus saving training time and reducing the complexity of the system. With addition to that, NVIDIA CUDA will be also used to train the model with GPU to decrease the training time. During training, some experiments have been done to see the effect of some parameters on the results of the system, and to make sure that the chosen parameters in our model are the best. The results indicate that the training, validation, and testing accuracies of the proposed approach were high, the training duration reached very low values due to the innovation used (CUDA Toolkit) and the commands were successfully recognized by the model. These results outcome the results of the papers that developed similar work which will be presented in the coming sections.
语音识别软件是一种计算机程序,它被训练来接受人类语音的输入,解释它,并将其转录成文本。最近,该领域受益于深度学习和大数据的进步。这些进步不仅体现在该领域发表的学术论文的激增上,更重要的是,世界范围内的行业在设计和部署语音识别系统时采用了各种深度学习方法。本文的目的是提出一种先进而准确的最终用户软件系统,该系统能够识别特定命令来控制医院中的机器人执行特定任务。这个模型将基于深度学习,因为对于我们模型中使用的两个版本的Google TensorFlow和AIY数据集来说,深度学习在拥有大量数据的模型中是有效的。将使用卷积神经网络,因为它能够从数据集中提取特征,而不是传统的特征提取方法,从而节省了训练时间,降低了系统的复杂性。除此之外,NVIDIA CUDA还将使用GPU来训练模型,以减少训练时间。在训练过程中,我们做了一些实验来观察一些参数对系统结果的影响,以确保我们的模型中选择的参数是最好的。结果表明,该方法的训练、验证和测试精度较高,训练持续时间较短,并且模型能够成功识别命令。这些结果产生了将在接下来的部分中提出的开发类似工作的论文的结果。
{"title":"Speech Command Recognition Using Deep Learning","authors":"M. Ayache, Hussien Kanaan, Kawthar Kassir, Yasser Kassir","doi":"10.1109/ICABME53305.2021.9604862","DOIUrl":"https://doi.org/10.1109/ICABME53305.2021.9604862","url":null,"abstract":"Speech Recognition Software is a computer program that is trained to take the input of human speech, interpret it, and transcribe it into text. Most recently, the field has benefited from advances in deep learning and big data. The advances are evidenced not only by the surge of academic papers published in the field, but more importantly by the worldwide industry adoption of a variety of deep learning methods in designing and deploying speech recognition systems. The objective of this paper is to propose an advanced and accurate end-user software system that is able to recognize specific commands to control a robot to perform specified tasks in a hospital. This model will be based on Deep Learning since it is effective in models having huge data as for the two versions of Google TensorFlow and AIY datasets used in our model. Convolutional neural network will be used since it is able to extract features from the dataset instead of traditional methods of feature extraction, thus saving training time and reducing the complexity of the system. With addition to that, NVIDIA CUDA will be also used to train the model with GPU to decrease the training time. During training, some experiments have been done to see the effect of some parameters on the results of the system, and to make sure that the chosen parameters in our model are the best. The results indicate that the training, validation, and testing accuracies of the proposed approach were high, the training duration reached very low values due to the innovation used (CUDA Toolkit) and the commands were successfully recognized by the model. These results outcome the results of the papers that developed similar work which will be presented in the coming sections.","PeriodicalId":294393,"journal":{"name":"2021 Sixth International Conference on Advances in Biomedical Engineering (ICABME)","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130048596","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 8
CNN for multiple sclerosis lesion segmentation: How many patients for a fully supervised method? CNN用于多发性硬化症病灶分割:有多少患者需要完全监督的方法?
Pub Date : 2021-10-07 DOI: 10.1109/ICABME53305.2021.9604859
A. Fenneteau, P. Bourdon, D. Helbert, C. Fernandez-Maloigne, C. Habas, R. Guillevin
In this study we propose to improve an existing artificial neural network architecture, the MPU-net, which is designed for having very few parameters for multiple sclerosis lesion segmentation on magnetic resonance images. With this improved architecture we conducted a study to assess the influence of the number of training examples on the model performance and generalization. The question behind this study is: "With an appropriate architecture, how many patients do we need?". We evaluated 9 different adaptations of the MPU-net architecture. Then, after the selection of the best architecture we learned the model multiple times with different numbers of patients and assessed its performances. The addition of deep supervision, the reduction of number of convolutional layers and the addition of regularization layers produced a more stable and performant architecture. Learnings of selected model with only 10 exams delivered performances equivalent to learnings with 23 exams. So, in our experimental setup, it is possible to learn a performant model with only 10 fully annotated examples.
在这项研究中,我们提出了改进现有的人工神经网络架构,MPU-net,它是为磁共振图像上的多发性硬化症病变分割而设计的,具有很少的参数。利用这种改进的体系结构,我们进行了一项研究,以评估训练样本数量对模型性能和泛化的影响。这项研究背后的问题是:“在一个合适的架构下,我们需要多少病人?”我们评估了9种不同的MPU-net架构。然后,在选择出最佳架构后,我们对不同患者数量的模型进行多次学习,并评估其性能。深度监督的加入、卷积层数的减少和正则化层的增加产生了一个更加稳定和高性能的体系结构。只有10次考试的选定模型的学习效果与23次考试的学习效果相当。因此,在我们的实验设置中,仅用10个完全注释的示例就可以学习一个高性能模型。
{"title":"CNN for multiple sclerosis lesion segmentation: How many patients for a fully supervised method?","authors":"A. Fenneteau, P. Bourdon, D. Helbert, C. Fernandez-Maloigne, C. Habas, R. Guillevin","doi":"10.1109/ICABME53305.2021.9604859","DOIUrl":"https://doi.org/10.1109/ICABME53305.2021.9604859","url":null,"abstract":"In this study we propose to improve an existing artificial neural network architecture, the MPU-net, which is designed for having very few parameters for multiple sclerosis lesion segmentation on magnetic resonance images. With this improved architecture we conducted a study to assess the influence of the number of training examples on the model performance and generalization. The question behind this study is: \"With an appropriate architecture, how many patients do we need?\". We evaluated 9 different adaptations of the MPU-net architecture. Then, after the selection of the best architecture we learned the model multiple times with different numbers of patients and assessed its performances. The addition of deep supervision, the reduction of number of convolutional layers and the addition of regularization layers produced a more stable and performant architecture. Learnings of selected model with only 10 exams delivered performances equivalent to learnings with 23 exams. So, in our experimental setup, it is possible to learn a performant model with only 10 fully annotated examples.","PeriodicalId":294393,"journal":{"name":"2021 Sixth International Conference on Advances in Biomedical Engineering (ICABME)","volume":"52 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"133303235","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Distinguishing Hearts: How Machine Learning identifies People based on their Heartbeat 区分心脏:机器学习如何根据心跳识别人
Pub Date : 2021-10-07 DOI: 10.1109/ICABME53305.2021.9604855
C. Lipps, Lea Bergkemper, H. Schotten
Though biometrics are moving into a recent focus, they are actually the oldest form of identification. Humans, and even some animals, recognize each other by their voice, body shape and face. But with the emergence of sensors close to the body combined with the possibilities of Artificial Intelligence (AI), other factors such as the gait and behaviorals are also becoming of increasingly interest.Therefore, this paper illustrates how individuals, supported by Machine Learning (ML) methods, can be distinguished based on their Electrocardiogram (ECG) signals. ECG values recorded with an Microcontroller Unit (MCU) are used and the applicability of three different ML methods -K-Nearest Neighbor (KNN), Support Vector Machine (SVM) and Gaussian Naive Bayes (GNB)- are compared. The results also indicate the potential of ML in terms of applications in (tele)medicine and disease prevention.
尽管生物识别技术最近才成为人们关注的焦点,但它们实际上是最古老的身份识别形式。人类,甚至一些动物,通过声音、体型和脸来识别彼此。但随着靠近身体的传感器的出现,加上人工智能(AI)的可能性,步态和行为等其他因素也越来越受到关注。因此,本文说明了如何在机器学习(ML)方法的支持下,根据他们的心电图(ECG)信号来区分个体。利用单片机记录的心电图值,比较了k -最近邻(KNN)、支持向量机(SVM)和高斯朴素贝叶斯(GNB)三种不同的机器学习方法的适用性。结果还表明机器学习在(远程)医学和疾病预防方面的应用潜力。
{"title":"Distinguishing Hearts: How Machine Learning identifies People based on their Heartbeat","authors":"C. Lipps, Lea Bergkemper, H. Schotten","doi":"10.1109/ICABME53305.2021.9604855","DOIUrl":"https://doi.org/10.1109/ICABME53305.2021.9604855","url":null,"abstract":"Though biometrics are moving into a recent focus, they are actually the oldest form of identification. Humans, and even some animals, recognize each other by their voice, body shape and face. But with the emergence of sensors close to the body combined with the possibilities of Artificial Intelligence (AI), other factors such as the gait and behaviorals are also becoming of increasingly interest.Therefore, this paper illustrates how individuals, supported by Machine Learning (ML) methods, can be distinguished based on their Electrocardiogram (ECG) signals. ECG values recorded with an Microcontroller Unit (MCU) are used and the applicability of three different ML methods -K-Nearest Neighbor (KNN), Support Vector Machine (SVM) and Gaussian Naive Bayes (GNB)- are compared. The results also indicate the potential of ML in terms of applications in (tele)medicine and disease prevention.","PeriodicalId":294393,"journal":{"name":"2021 Sixth International Conference on Advances in Biomedical Engineering (ICABME)","volume":"37 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114948707","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
Observation of biological vs non-biological of squat vertical jump to improve the motor performance of a similar task 观察生物与非生物深蹲垂直跳对类似任务运动表现的改善
Pub Date : 2021-10-07 DOI: 10.1109/ICABME53305.2021.9604875
Mazen Kabbara, Joy Khayat, Saja Haj Hassan, F. Ayoubi, A. R. Sarraj
It is claimed that humans are particularly sensitive to biological motion. A biological motion is a pattern and class of articulated motion specific to animals and humans. The ability to perceive biological motion pattern over non-biological ones has been discussed in the research literature. Johansson et al. in 1973 has confirmed that human can perceive biological motion pattern from movements of little dots. Here, we investigate the difference between observing biological and non-biological task of squat vertical jump (SVJ). Action Observation has been proved also to improve motor performance of SVJ in several previous studies. Results of this study didn’t show any difference in observing both movements upon the performance of SVJ. We concluded that a kinogram may be internally represented from previous daily life experiences or scenes and therefore improvement of SVJ was confirmed with AO, but for both stimuli. Further research should stress the importance of the cognitive stimuli et its meaning for the observers.
据说人类对生物运动特别敏感。生物运动是动物和人类特有的关节运动的模式和类别。对非生物运动模式的感知能力已经在研究文献中进行了讨论。Johansson et al.在1973年证实了人类可以从小点的运动中感知生物的运动模式。在此,我们研究了蹲下垂直跳(SVJ)的生物和非生物任务的观察差异。在之前的一些研究中,动作观察也被证明可以改善上下颌关节的运动性能。本研究的结果显示,观察两种运动对SVJ的表现没有任何差异。我们得出的结论是,运动图可能是由以前的日常生活经历或场景内部表示的,因此,AO证实了SVJ的改善,但对于两种刺激。进一步的研究应强调认知刺激的重要性及其对观察者的意义。
{"title":"Observation of biological vs non-biological of squat vertical jump to improve the motor performance of a similar task","authors":"Mazen Kabbara, Joy Khayat, Saja Haj Hassan, F. Ayoubi, A. R. Sarraj","doi":"10.1109/ICABME53305.2021.9604875","DOIUrl":"https://doi.org/10.1109/ICABME53305.2021.9604875","url":null,"abstract":"It is claimed that humans are particularly sensitive to biological motion. A biological motion is a pattern and class of articulated motion specific to animals and humans. The ability to perceive biological motion pattern over non-biological ones has been discussed in the research literature. Johansson et al. in 1973 has confirmed that human can perceive biological motion pattern from movements of little dots. Here, we investigate the difference between observing biological and non-biological task of squat vertical jump (SVJ). Action Observation has been proved also to improve motor performance of SVJ in several previous studies. Results of this study didn’t show any difference in observing both movements upon the performance of SVJ. We concluded that a kinogram may be internally represented from previous daily life experiences or scenes and therefore improvement of SVJ was confirmed with AO, but for both stimuli. Further research should stress the importance of the cognitive stimuli et its meaning for the observers.","PeriodicalId":294393,"journal":{"name":"2021 Sixth International Conference on Advances in Biomedical Engineering (ICABME)","volume":"4 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115421733","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Bringing AI to Automatic Diagnosis of Diabetic Retinopathy from Optical Coherence Tomography Angiography 将人工智能应用于光学相干断层扫描血管造影中的糖尿病视网膜病变自动诊断
Pub Date : 2021-10-07 DOI: 10.1109/ICABME53305.2021.9604812
A. Zaylaa, Ghiwa I. Wehbe, AbdulJalil M. Ouahabi
Artificial Intelligence (AI) is significantly gaining interest in the field of Diagnostic and Functional Optical Imaging. As cutting-edge algorithms for decision-making are vast and medical imaging machines are diverse, the choice of the ultimate algorithm remains challenging. As a breakthrough in the field, our aim is to explore the adequate machine and deep learning algorithms that improve the classification of Optical Coherence Tomography Angiography (OCTA) Images, between normal and Diabetic Retinopathy (DR) images. The target was to provide an automatic paradigm for the medical staff to detect the presence of DR Lesions from OCTA images for diagnostic and monitoring purposes. Data were collected prospectively over a year from a comprehensive medical center in Lebanon. The mixed Convolution Neural Network (CNN)-Support Vector Machine Network (CNN, SVM) algorithm was utilized in the new paradigm and compared to the feed forward backpropagation NN, to the SVM and to the modified SVM. Results were evaluated independently for the presence or absence of DR using statistical metrics. Experimental results showcased promising association of deep learning to the early diagnosis of DR. Results manifested the high performance of the new paradigm, where the mixed algorithm applied to the functional OCTA surpassed the performance of the feed forward backpropagation NN. The sensitivity of the mixed (CNN, SVM) algorithm was 22.22% higher than that obtained by the feed forward backpropagation NN. Moreover, the specificity of classification of DR from OCTA images using mixed (CNN, SVM) algorithm was 24.44% higher than that obtained by the feed forward backpropagation NN. The precision was 25.47% higher in the new paradigm than that obtained by the feed forward backpropagation network, and the accuracy was 23.35% higher in the mixed (CNN, SVM) than that obtained by the feed forward backpropagation NN. This high performance plays a massive role in improving the diagnosis of DR, and thus Healthcare system and processing of information. As a future prospect, we aim to consider more algorithms and variables in the diagnosis of DR from OCTA images.
人工智能(AI)在诊断和功能光学成像领域的兴趣显著增加。由于用于决策的尖端算法数量庞大,医学成像设备种类繁多,最终算法的选择仍然具有挑战性。作为该领域的突破,我们的目标是探索适当的机器和深度学习算法,以改进光学相干断层扫描血管造影(OCTA)图像在正常和糖尿病视网膜病变(DR)图像之间的分类。目标是为医务人员提供一个自动范例,以便从OCTA图像中检测DR病变的存在,以进行诊断和监测。数据是在黎巴嫩的一个综合医疗中心前瞻性地收集了一年多的。在新范式中使用混合卷积神经网络(CNN)-支持向量机网络(CNN, SVM)算法,并与前馈反向传播神经网络、支持向量机和改进的支持向量机进行了比较。使用统计指标独立评估结果是否存在DR。实验结果显示了深度学习与dr早期诊断的良好关联。结果表明了新范式的高性能,其中混合算法应用于功能OCTA的性能超过了前馈反向传播神经网络。与前向反向传播神经网络相比,混合(CNN, SVM)算法的灵敏度提高了22.22%。此外,使用混合(CNN, SVM)算法对OCTA图像进行DR分类的特异性比前馈反向传播NN的分类特异性高24.44%。与前向反向传播神经网络相比,新范式下的准确率提高了25.47%,与前向反向传播神经网络相比,混合模式下(CNN、SVM)的准确率提高了23.35%。这种高性能在改进DR诊断以及医疗保健系统和信息处理方面发挥了巨大的作用。展望未来,我们的目标是考虑更多的算法和变量来从OCTA图像中诊断DR。
{"title":"Bringing AI to Automatic Diagnosis of Diabetic Retinopathy from Optical Coherence Tomography Angiography","authors":"A. Zaylaa, Ghiwa I. Wehbe, AbdulJalil M. Ouahabi","doi":"10.1109/ICABME53305.2021.9604812","DOIUrl":"https://doi.org/10.1109/ICABME53305.2021.9604812","url":null,"abstract":"Artificial Intelligence (AI) is significantly gaining interest in the field of Diagnostic and Functional Optical Imaging. As cutting-edge algorithms for decision-making are vast and medical imaging machines are diverse, the choice of the ultimate algorithm remains challenging. As a breakthrough in the field, our aim is to explore the adequate machine and deep learning algorithms that improve the classification of Optical Coherence Tomography Angiography (OCTA) Images, between normal and Diabetic Retinopathy (DR) images. The target was to provide an automatic paradigm for the medical staff to detect the presence of DR Lesions from OCTA images for diagnostic and monitoring purposes. Data were collected prospectively over a year from a comprehensive medical center in Lebanon. The mixed Convolution Neural Network (CNN)-Support Vector Machine Network (CNN, SVM) algorithm was utilized in the new paradigm and compared to the feed forward backpropagation NN, to the SVM and to the modified SVM. Results were evaluated independently for the presence or absence of DR using statistical metrics. Experimental results showcased promising association of deep learning to the early diagnosis of DR. Results manifested the high performance of the new paradigm, where the mixed algorithm applied to the functional OCTA surpassed the performance of the feed forward backpropagation NN. The sensitivity of the mixed (CNN, SVM) algorithm was 22.22% higher than that obtained by the feed forward backpropagation NN. Moreover, the specificity of classification of DR from OCTA images using mixed (CNN, SVM) algorithm was 24.44% higher than that obtained by the feed forward backpropagation NN. The precision was 25.47% higher in the new paradigm than that obtained by the feed forward backpropagation network, and the accuracy was 23.35% higher in the mixed (CNN, SVM) than that obtained by the feed forward backpropagation NN. This high performance plays a massive role in improving the diagnosis of DR, and thus Healthcare system and processing of information. As a future prospect, we aim to consider more algorithms and variables in the diagnosis of DR from OCTA images.","PeriodicalId":294393,"journal":{"name":"2021 Sixth International Conference on Advances in Biomedical Engineering (ICABME)","volume":"36 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115520669","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
期刊
2021 Sixth International Conference on Advances in Biomedical Engineering (ICABME)
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1