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Q&A: Riccardo Dalla-Favera on Cancer Genetics. 问:Riccardo Dalla-Favera关于癌症遗传学。
IF 11.2 Q1 HEMATOLOGY Pub Date : 2023-09-01 DOI: 10.1158/2643-3230.BCD-ND2023-0001
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引用次数: 0
A Single-Cell Taxonomy Predicts Inflammatory Niche Remodeling to Drive Tissue Failure and Outcome in Human AML. 单细胞分类预测炎症小生境重塑以驱动人类AML的组织衰竭和结果。
IF 11.2 Q1 HEMATOLOGY Pub Date : 2023-09-01 DOI: 10.1158/2643-3230.BCD-23-0043
Lanpeng Chen, Eline Pronk, Claire van Dijk, Yujie Bian, Jacqueline Feyen, Tim van Tienhoven, Meltem Yildirim, Paola Pisterzi, Madelon M E de Jong, Alejandro Bastidas, Remco M Hoogenboezem, Chiel Wevers, Eric M Bindels, Bob Löwenberg, Tom Cupedo, Mathijs A Sanders, Marc H G P Raaijmakers

Cancer initiation is orchestrated by an interplay between tumor-initiating cells and their stromal/immune environment. Here, by adapted single-cell RNA sequencing, we decipher the predicted signaling between tissue-resident hematopoietic stem/progenitor cells (HSPC) and their neoplastic counterparts with their native niches in the human bone marrow. LEPR+ stromal cells are identified as central regulators of hematopoiesis through predicted interactions with all cells in the marrow. Inflammatory niche remodeling and the resulting deprivation of critical HSPC regulatory factors are predicted to repress high-output hematopoietic stem cell subsets in NPM1-mutated acute myeloid leukemia (AML), with relative resistance of clonal cells. Stromal gene signatures reflective of niche remodeling are associated with reduced relapse rates and favorable outcomes after chemotherapy across all genetic risk categories. Elucidation of the intercellular signaling defining human AML, thus, predicts that inflammatory remodeling of stem cell niches drives tissue repression and clonal selection but may pose a vulnerability for relapse-initiating cells in the context of chemotherapeutic treatment.

Significance: Tumor-promoting inflammation is considered an enabling characteristic of tumorigenesis, but mechanisms remain incompletely understood. By deciphering the predicted signaling between tissue-resident stem cells and their neoplastic counterparts with their environment, we identify inflammatory remodeling of stromal niches as a determinant of normal tissue repression and clinical outcomes in human AML. See related commentary by Lisi-Vega and Méndez-Ferrer, p. 349. This article is featured in Selected Articles from This Issue, p. 337.

癌症的起始是由肿瘤起始细胞与其基质/免疫环境之间的相互作用所协调的。在这里,通过适应的单细胞RNA测序,我们破译了组织驻留的造血干/祖细胞(HSPC)与其在人类骨髓中具有天然小生境的肿瘤对应物之间的预测信号。LEPR+基质细胞通过预测与骨髓中所有细胞的相互作用被鉴定为造血的中枢调节因子。在NPM1突变的急性髓系白血病(AML)中,炎症小生境重塑和由此导致的关键HSPC调节因子的剥夺被预测会抑制高输出造血干细胞亚群,并具有克隆细胞的相对抗性。反映生态位重塑的基质基因特征与所有遗传风险类别的化疗后复发率降低和良好结果相关。因此,定义人类AML的细胞间信号的阐明预测,干细胞小生境的炎症重塑驱动组织抑制和克隆选择,但在化疗治疗的背景下,可能对复发起始细胞造成脆弱性。意义:促肿瘤炎症被认为是肿瘤发生的一个有利特征,但其机制尚不完全清楚。通过破译组织驻留干细胞及其肿瘤对应物与其环境之间的预测信号,我们确定基质小生境的炎症重塑是人类AML正常组织抑制和临床结果的决定因素。见Lisi Vega和Méndez Ferrer的相关评论,第349页。这篇文章刊登在本期精选文章中,第337页。
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引用次数: 0
HTLV-1 bZIP Factor-Induced Reprogramming of Lactate Metabolism and Epigenetic Status Promote Leukemic Cell Expansion. HTLV-1 bZIP因子诱导的乳酸代谢和表观遗传学状态的重新编程促进白血病细胞的扩增。
IF 11.2 Q1 HEMATOLOGY Pub Date : 2023-09-01 DOI: 10.1158/2643-3230.BCD-22-0139
Kosuke Toyoda, Jun-Ichirou Yasunaga, Takafumi Shichijo, Yuichiro Arima, Kenichi Tsujita, Azusa Tanaka, Tarig Salah, Wenyi Zhang, Osama Hussein, Miyu Sonoda, Miho Watanabe, Daisuke Kurita, Kazutaka Nakashima, Kyohei Yamada, Hiroaki Miyoshi, Koichi Ohshima, Masao Matsuoka

Acceleration of glycolysis is a common trait of cancer. A key metabolite, lactate, is typically secreted from cancer cells because its accumulation is toxic. Here, we report that a viral oncogene, HTLV-1 bZIP factor (HBZ), bimodally upregulates TAp73 to promote lactate excretion from adult T-cell leukemia-lymphoma (ATL) cells. HBZ protein binds to EZH2 and reduces its occupancy of the TAp73 promoter. Meanwhile, HBZ RNA activates TAp73 transcription via the BATF3-IRF4 machinery. TAp73 upregulates the lactate transporters MCT1 and MCT4. Inactivation of TAp73 leads to intracellular accumulation of lactate, inducing cell death in ATL cells. Furthermore, TAp73 knockout diminishes the development of inflammation in HBZ-transgenic mice. An MCT1/4 inhibitor, syrosingopine, decreases the growth of ATL cells in vitro and in vivo. MCT1/4 expression is positively correlated with TAp73 in many cancers, and MCT1/4 upregulation is associated with dismal prognosis. Activation of the TAp73-MCT1/4 pathway could be a common mechanism contributing to cancer metabolism.

Significance: An antisense gene encoded in HTLV-1, HBZ, reprograms lactate metabolism and epigenetic modification by inducing TAp73 in virus-positive leukemic cells. A positive correlation between TAp73 and its target genes is also observed in many other cancer cells, suggesting that this is a common mechanism for cellular oncogenesis. This article is featured in Selected Articles from This Issue, p. 337.

加速糖酵解是癌症的常见特征。一种关键的代谢产物乳酸盐通常由癌症细胞分泌,因为它的积累是有毒的。在这里,我们报道了一种病毒癌基因,HTLV-1 bZIP因子(HBZ),双向上调TAp73,以促进成人T细胞白血病淋巴瘤(ATL)细胞的乳酸排泄。HBZ蛋白与EZH2结合并减少其对TAp73启动子的占有。同时,HBZ RNA通过BATF3-IRF4机制激活TAp73转录。TAp73上调乳酸转运蛋白MCT1和MCT4。TAp73的失活导致细胞内乳酸的积累,诱导ATL细胞中的细胞死亡。此外,TAp73敲除减少了HBZ转基因小鼠中炎症的发展。MCT1/4抑制剂syrosingopine在体外和体内降低ATL细胞的生长。在许多癌症中,MCT1/4表达与TAp73呈正相关,而MCT1/4上调与预后不佳有关。TAp73-MCT1/4通路的激活可能是促进癌症代谢的常见机制。意义:HTLV-1、HBZ中编码的反义基因通过诱导病毒阳性白血病细胞中的TAp73,重新编程乳酸代谢和表观遗传学修饰。在许多其他癌症细胞中也观察到TAp73与其靶基因之间的正相关性,这表明这是细胞致癌的常见机制。这篇文章刊登在本期精选文章中,第337页。
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引用次数: 0
The Inflamed Niche: A Double-Edged Sword in AML? 发炎的壁龛:AML中的双刃剑?
IF 11.2 Q1 HEMATOLOGY Pub Date : 2023-09-01 DOI: 10.1158/2643-3230.BCD-23-0125
Livia E Lisi-Vega, Simón Méndez-Ferrer

Summary: Although inflammation has long been recognized as a hallmark of many cancers, including acute myeloid leukemia (AML), how it affects individual cells of the tumor microenvironment and their interaction with normal and neoplastic cells is incompletely understood. A comprehensive single-cell transcriptomic analysis of human bone marrow from patients with AML and healthy individuals identified skewing of stem cell and stromal cell populations in AML toward proinflammatory states associated with reduced risk of relapse, paralleling previous findings in mouse models and suggesting that inflamed bone marrow mesenchymal stromal cells might be a double-edged sword in AML by hampering normal hematopoiesis (while AML cells appear comparatively more resilient) but also rendering AML cells more susceptible to chemotherapy or immune attack. See related article by Chen et al., p. 394 (7) .

摘要:尽管炎症长期以来一直被认为是许多癌症的标志,包括急性髓细胞白血病(AML),但它如何影响肿瘤微环境中的单个细胞及其与正常细胞和肿瘤细胞的相互作用尚不完全清楚。对AML患者和健康个体的人类骨髓进行的全面单细胞转录组学分析发现,AML中的干细胞和基质细胞群体向与复发风险降低相关的促炎状态倾斜,与之前在小鼠模型中的发现相类似,并表明发炎的骨髓间充质基质细胞可能是AML的一把双刃剑,它阻碍了正常的造血(而AML细胞看起来相对更有弹性),但也使AML细胞更容易受到化疗或免疫攻击。见Chen等人的相关文章,第394(7)页。
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引用次数: 0
A Phase Ib/II Study of Ivosidenib with Venetoclax ± Azacitidine in IDH1-Mutated Myeloid Malignancies. Ivosidenib与Venetoclax±阿扎胞苷治疗IDH1突变髓系恶性肿瘤的Ib/II期研究
IF 11.2 Q1 HEMATOLOGY Pub Date : 2023-07-05 DOI: 10.1158/2643-3230.BCD-22-0205
Curtis A Lachowiez, Sanam Loghavi, Zhihong Zeng, Tomoyuki Tanaka, Yi June Kim, Hidetaka Uryu, Sven Turkalj, Niels Asger Jakobsen, Marlise R Luskin, Dzifa Y Duose, Rebecca S S Tidwell, Nicholas J Short, Gautam Borthakur, Tapan M Kadia, Lucia Masarova, George D Tippett, Prithviraj Bose, Elias J Jabbour, Farhad Ravandi, Naval G Daver, Guillermo Garcia-Manero, Hagop Kantarjian, Jacqueline S Garcia, Paresh Vyas, Koichi Takahashi, Marina Konopleva, Courtney D DiNardo

The safety and efficacy of combining the isocitrate dehydrogenase-1 (IDH1) inhibitor ivosidenib (IVO) with the BCL2 inhibitor venetoclax (VEN; IVO + VEN) ± azacitidine (AZA; IVO + VEN + AZA) were evaluated in four cohorts of patients with IDH1-mutated myeloid malignancies (n = 31). Most (91%) adverse events were grade 1 or 2. The maximal tolerated dose was not reached. Composite complete remission with IVO + VEN + AZA versus IVO + VEN was 90% versus 83%. Among measurable residual disease (MRD)-evaluable patients (N = 16), 63% attained MRD--negative remissions; IDH1 mutation clearance occurred in 64% of patients receiving ≥5 treatment cycles (N = 14). Median event-free survival and overall survival were 36 [94% CI, 23-not reached (NR)] and 42 (95% CI, 42-NR) months. Patients with signaling gene mutations appeared to particularly benefit from the triplet regimen. Longitudinal single-cell proteogenomic analyses linked cooccurring mutations, antiapoptotic protein expression, and cell maturation to therapeutic sensitivity of IDH1-mutated clones. No IDH isoform switching or second-site IDH1 mutations were observed, indicating combination therapy may overcome established resistance pathways to single-agent IVO.

Significance: IVO + VEN + AZA is safe and active in patients with IDH1-mutated myeloid malignancies. Combination therapy appears to overcome resistance mechanisms observed with single-agent IDH-inhibitor use, with high MRD-negative remission rates. Single-cell DNA ± protein and time-of-flight mass-cytometry analysis revealed complex resistance mechanisms at relapse, highlighting key pathways for future therapeutic intervention. This article is highlighted in the In This Issue feature, p. 247.

我们在四组IDH1突变的髓系恶性肿瘤患者(n = 31)中评估了异柠檬酸脱氢酶-1(IDH1)抑制剂伊沃西地尼(IVO)与BCL2抑制剂venetoclax(VEN;IVO + VEN)±阿扎胞苷(AZA;IVO + VEN + AZA)联合治疗的安全性和有效性。大多数(91%)不良反应为 1 级或 2 级。未达到最大耐受剂量。IVO+VEN+AZA与IVO+VEN的复合完全缓解率分别为90%和83%。在有可测量残留疾病(MRD)价值的患者(16例)中,63%的患者获得了MRD阴性缓解;在接受≥5个治疗周期的患者中,64%的患者(14例)清除了IDH1突变。无事件生存期和总生存期的中位数分别为36个月[94% CI,23个月未达到(NR)]和42个月(95% CI,42-NR)。信号转导基因突变的患者似乎尤其受益于三联疗法。纵向单细胞蛋白基因组分析将共生突变、抗凋亡蛋白表达和细胞成熟与IDH1突变克隆的治疗敏感性联系起来。没有观察到IDH同工酶转换或第二位点IDH1突变,这表明联合疗法可以克服单药IVO的既有耐药途径:IVO+VEN+AZA对IDH1突变的髓系恶性肿瘤患者安全且有效。联合疗法似乎克服了单药IDH抑制剂的耐药机制,MRD阴性缓解率很高。单细胞DNA±蛋白质和飞行时间质量计量分析揭示了复发时复杂的耐药机制,突出了未来治疗干预的关键途径。本期特刊第 247 页重点介绍了这篇文章。
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引用次数: 0
Patient-Derived iPSCs Faithfully Represent the Genetic Diversity and Cellular Architecture of Human Acute Myeloid Leukemia. 患者来源的iPSC忠实地代表了人类急性髓细胞白血病的遗传多样性和细胞结构。
IF 11.5 Q1 HEMATOLOGY Pub Date : 2023-07-05 DOI: 10.1158/2643-3230.BCD-22-0167
Andriana G Kotini, Saul Carcamo, Nataly Cruz-Rodriguez, Malgorzata Olszewska, Tiansu Wang, Deniz Demircioglu, Chan-Jung Chang, Elsa Bernard, Mark P Chao, Ravindra Majeti, Hanzhi Luo, Michael G Kharas, Dan Hasson, Eirini P Papapetrou

The reprogramming of human acute myeloid leukemia (AML) cells into induced pluripotent stem cell (iPSC) lines could provide new faithful genetic models of AML, but is currently hindered by low success rates and uncertainty about whether iPSC-derived cells resemble their primary counterparts. Here we developed a reprogramming method tailored to cancer cells, with which we generated iPSCs from 15 patients representing all major genetic groups of AML. These AML-iPSCs retain genetic fidelity and produce transplantable hematopoietic cells with hallmark phenotypic leukemic features. Critically, single-cell transcriptomics reveal that, upon xenotransplantation, iPSC-derived leukemias faithfully mimic the primary patient-matched xenografts. Transplantation of iPSC-derived leukemias capturing a clone and subclone from the same patient allowed us to isolate the contribution of a FLT3-ITD mutation to the AML phenotype. The results and resources reported here can transform basic and preclinical cancer research of AML and other human cancers.

Significance: We report the generation of patient-derived iPSC models of all major genetic groups of human AML. These exhibit phenotypic hallmarks of AML in vitro and in vivo, inform the clonal hierarchy and clonal dynamics of human AML, and exhibit striking similarity to patient-matched primary leukemias upon xenotransplantation. See related commentary by Doulatov, p. 252. This article is highlighted in the In This Issue feature, p. 247.

将人类急性髓性白血病(AML)细胞重编程为诱导多能干细胞(iPSC)系可以提供AML的新的忠实遗传模型,但目前由于成功率低和iPSC衍生细胞是否与原代细胞相似的不确定性而受到阻碍。在这里,我们开发了一种专门针对癌症细胞的重编程方法,用它我们从15名代表AML所有主要遗传群的患者中产生了iPSC。这些AML iPSC保持遗传保真度,并产生具有标志性表型白血病特征的可移植造血细胞。至关重要的是,单细胞转录组学显示,在异种移植后,iPSC衍生的白血病忠实地模拟了原代患者匹配的异种移植物。移植iPSC衍生的白血病,捕获来自同一患者的克隆和亚克隆,使我们能够分离FLT3-ITD突变对AML表型的贡献。本文报道的结果和资源可以改变AML和其他人类癌症的基础和临床前癌症研究。意义:我们报道了人类AML所有主要基因组的患者衍生iPSC模型的生成。这些在体外和体内表现出AML的表型特征,为人类AML的克隆层次和克隆动力学提供信息,并在异种移植后与患者匹配的原发性白血病表现出惊人的相似性。见Doulatov的相关评论,第252页。这篇文章在第247页的《在这个问题上》专题文章中有重点介绍。
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引用次数: 0
iPSC Models of Leukemia Come of Age. iPSC 白血病模型进入成熟期
IF 11.2 Q1 HEMATOLOGY Pub Date : 2023-07-05 DOI: 10.1158/2643-3230.BCD-23-0041
Sergei Doulatov

Summary: In this issue of Blood Cancer Discovery, Kotini and colleagues present a strategy for large-scale reprogramming of primary human acute myeloid leukemias (AML) to induced pluripotent stem cell (iPSC). They show that the hematopoietic differentiation of AML iPSCs gives rise to transplantable leukemias with remarkable molecular similarity to the original patients' AML, providing new models and insights into the disease. See related article by Kotini et al., p. 318 (7) .

摘要:在本期《血癌发现》(Blood Cancer Discovery)杂志上,Kotini及其同事介绍了一种将原发性人类急性髓性白血病(AML)大规模重编程为诱导多能干细胞(iPSC)的策略。他们的研究表明,AML iPSC 的造血分化产生的可移植白血病与原始患者的急性髓性白血病具有显著的分子相似性,这为研究这种疾病提供了新的模型和见解。见 Kotini 等人的相关文章,第 318 页(7)。
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引用次数: 0
The Polyamine-Hypusine Circuit Controls an Oncogenic Translational Program Essential for Malignant Conversion in MYC-Driven Lymphoma. 多胺-秋水仙碱回路控制着对 MYC 驱动的淋巴瘤恶性转化至关重要的致癌转化程序。
IF 11.2 Q1 HEMATOLOGY Pub Date : 2023-07-05 DOI: 10.1158/2643-3230.BCD-22-0162
Shima Nakanishi, Jiannong Li, Anders E Berglund, Youngchul Kim, Yonghong Zhang, Ling Zhang, Chunying Yang, Jinming Song, Raghavendra G Mirmira, John L Cleveland

The MYC oncoprotein is activated in a broad spectrum of human malignancies and transcriptionally reprograms the genome to drive cancer cell growth. Given this, it is unclear if targeting a single effector of MYC will have therapeutic benefit. MYC activates the polyamine-hypusine circuit, which posttranslationally modifies the eukaryotic translation factor eIF5A. The roles of this circuit in cancer are unclear. Here we report essential intrinsic roles for hypusinated eIF5A in the development and maintenance of MYC-driven lymphoma, where the loss of eIF5A hypusination abolishes malignant transformation of MYC-overexpressing B cells. Mechanistically, integrating RNA sequencing, ribosome sequencing, and proteomic analyses revealed that efficient translation of select targets is dependent upon eIF5A hypusination, including regulators of G1-S phase cell-cycle progression and DNA replication. This circuit thus controls MYC's proliferative response, and it is also activated across multiple malignancies. These findings suggest the hypusine circuit as a therapeutic target for several human tumor types.

Significance: Elevated EIF5A and the polyamine-hypusine circuit are manifest in many malignancies, including MYC-driven tumors, and eIF5A hypusination is necessary for MYC proliferative signaling. Not-ably, this circuit controls an oncogenic translational program essential for the development and maintenance of MYC-driven lymphoma, supporting this axis as a target for cancer prevention and treatment. See related commentary by Wilson and Klein, p. 248. This article is highlighted in the In This Issue feature, p. 247.

MYC 癌症蛋白在多种人类恶性肿瘤中被激活,并通过转录重编程基因组来驱动癌细胞生长。有鉴于此,目前还不清楚针对 MYC 的单一效应物是否会产生治疗效果。MYC 可激活多胺-羽扇豆碱回路,该回路可对真核翻译因子 eIF5A 进行翻译后修饰。该回路在癌症中的作用尚不清楚。在这里,我们报告了eIF5A低复性在MYC驱动的淋巴瘤的发展和维持过程中的重要内在作用,其中eIF5A低复性的缺失会取消MYC过表达B细胞的恶性转化。从机理上讲,通过整合 RNA 测序、核糖体测序和蛋白质组分析发现,选择靶点的高效翻译依赖于 eIF5A 的低浓化,包括 G1-S 期细胞周期进展和 DNA 复制的调节因子。因此,这一回路控制着 MYC 的增殖反应,它也在多种恶性肿瘤中被激活。这些研究结果表明,次碱基回路是几种人类肿瘤类型的治疗靶点:意义:EIF5A和多胺-肌松蛋白回路的升高在许多恶性肿瘤中都有表现,包括MYC驱动的肿瘤。值得注意的是,该回路控制着对 MYC 驱动的淋巴瘤的发展和维持至关重要的致癌转化程序,支持将该轴作为癌症预防和治疗的靶点。参见 Wilson 和 Klein 的相关评论,第 248 页。第 247 页的 "本期特写 "重点介绍了这篇文章。
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引用次数: 1
An MYC-Driven Vicious Circuit Is a Targetable Achilles' Heel in Lymphoma. MYC驱动的恶性循环是淋巴瘤的致命弱点。
IF 11.2 Q1 HEMATOLOGY Pub Date : 2023-07-05 DOI: 10.1158/2643-3230.BCD-23-0053
Erica B Wilson, Ulf Klein

Summary: In this issue of Blood Cancer Discovery, Nakanishi et al. uncover a critical role for the elevated activity of the translation initiation factor eIF5A in the malignant growth of MYC-driven lymphoma. eIF5A is posttranslationally modified by hypusination through MYC oncoprotein-mediated hyperactivation of the polyamine-hypusine circuit, which may represent a promising therapeutic target because an enzyme of this circuit that is required for hypusinating eIF5A proved to be essential for lymphoma development. See related article by Nakanishi et al., p. 294 (4).

摘要:在本期《血癌发现》(Blood Cancer Discovery)杂志上,Nakanishi等人发现了翻译起始因子eIF5A活性升高在MYC驱动的淋巴瘤恶性生长中的关键作用。eIF5A通过MYC肿瘤蛋白介导的多胺-羽扇豆碱环路的过度激活进行翻译后修饰,这可能是一个很有前景的治疗靶点,因为事实证明,该环路中的一种酶对eIF5A的过度修饰是淋巴瘤发展所必需的。参见 Nakanishi 等人的相关文章,第 294 页(4)。
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引用次数: 1
The Role of Inflammation in the Initiation and Progression of Myeloid Neoplasms. 炎症在髓系肿瘤的发生和发展中的作用
IF 11.2 Q1 HEMATOLOGY Pub Date : 2023-07-05 DOI: 10.1158/2643-3230.BCD-22-0176
Juan Carlos Balandrán, Audrey Lasry, Iannis Aifantis

Myeloid malignancies are devastating hematologic cancers with limited therapeutic options. Inflammation is emerging as a novel driver of myeloid malignancy, with important implications for tumor composition, immune response, therapeutic options, and patient survival. Here, we discuss the role of inflammation in normal and malignant hematopoiesis, from clonal hematopoiesis to full-blown myeloid leukemia. We discuss how inflammation shapes clonal output from hematopoietic stem cells, how inflammation alters the immune microenvironment in the bone marrow, and novel therapies aimed at targeting inflammation in myeloid disease.

Significance: Inflammation is emerging as an important factor in myeloid malignancies. Understanding the role of inflammation in myeloid transformation, and the interplay between inflammation and other drivers of leukemogenesis, may yield novel avenues for therapy.

髓系恶性肿瘤是破坏性极大的血液癌症,但治疗方案却很有限。炎症正在成为髓系恶性肿瘤的新型驱动因素,对肿瘤的组成、免疫反应、治疗方案和患者生存都有重要影响。在这里,我们将讨论炎症在正常和恶性造血过程中的作用,从克隆造血到全面爆发的髓系白血病。我们将讨论炎症如何影响造血干细胞的克隆输出,炎症如何改变骨髓中的免疫微环境,以及针对髓系疾病炎症的新型疗法:炎症正在成为髓系恶性肿瘤的一个重要因素。了解炎症在骨髓转化中的作用,以及炎症与白血病发生的其他驱动因素之间的相互作用,可能会为治疗提供新的途径。
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引用次数: 0
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