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2022 29th National and 7th International Iranian Conference on Biomedical Engineering (ICBME)最新文献

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An experimental and numerical study of microfluidic preparation of chitosan nanoparticle 微流控制备壳聚糖纳米颗粒的实验与数值研究
Pub Date : 2022-12-21 DOI: 10.1109/ICBME57741.2022.10052866
Sara Movahedi, Farshad Bahramian, Fatemeh Ghorbani-Bidkorbeh
Nanoparticle characteristics play a significant role in determining to proper nanocarrier for drug delivery. The improvement of cell response can obtain by simply manipulating the size of the implemented nanocarrier. This study aims to optimize nanoparticle characteristics (size and the polydispersity of chitosan, a common polymer, for further investigation. We used both numerical and experimental studies for this purpose. The coaxial microfluidic device was fabricated for the semi-automatic synthesis of nanoparticles. A real three-dimensional model of the chip was modeled in COMSOL Multiphysics (version 6.0) to evaluate the optimum mixing condition. In the result, the nanoparticle synthesized via microfluidic had a hydrodynamic size of 314 nm with narrow dispersity presented by low polydispersity. Consequently, the correlation between the nanoparticle's size, flow ratio, and mixing condition was discussed briefly.
纳米颗粒的特性对选择合适的纳米药物载体起着至关重要的作用。细胞反应的改善可以通过简单地操纵纳米载体的大小来实现。本研究旨在优化壳聚糖(一种常见的聚合物)的纳米颗粒特性(尺寸和多分散性),为进一步的研究做准备。为此,我们使用了数值和实验研究。研制了同轴微流控装置,用于纳米颗粒的半自动合成。在COMSOL Multiphysics(6.0)软件中建立了芯片的真实三维模型,以评估最佳混合条件。结果表明,微流控合成的纳米颗粒流体力学尺寸为314 nm,分散性较窄,多分散性较低。在此基础上,简要讨论了纳米颗粒粒径、流动比和混合条件之间的关系。
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引用次数: 0
QuickHap: a Quick heuristic algorithm for the single individual Haplotype reconstruction problem QuickHap:单个单倍型重构问题的快速启发式算法
Pub Date : 2022-12-21 DOI: 10.1109/ICBME57741.2022.10052910
Melina Bagher, Reza Karimzadeh, M. Jahed, B. Khalaj
Single individual haplotype reconstruction refers to the computational problem of inferring the two distinct copies of each chromosome. Determination of haplotypes offers many advantages for genomic-based studies in various fields of human genetics. Although many methods have been proposed to obtain haplotypes with high accuracy, the rapid and accurate solution of haplotype assembly is still a challenging problem. The largeness of the high-throughput sequence data and the length of the human genome emphasize the importance of the speed of algorithms. In this paper, we propose QuickHap, a heuristic algorithm to achieve a high speed of haplotyping with acceptable accuracy. Our algorithm contains two phases; first, a partial haplotype is built and expanded during several iterations. In this phase, we utilize a new metric to measure the quality of the reconstructed haplotype in each iteration to achieve the optimum solution. The second phase is applied to refine the reconstructed haplotypes to improve accuracy. The result demonstrates that the proposed method can reconstruct the haplotypes with promising accuracy. It outperforms the comparing methods in speed, particularly in dealing with high coverage sequencing data.
单个单倍型重建是指推断每条染色体的两个不同拷贝的计算问题。单倍型的确定为人类遗传学各个领域的基因组学研究提供了许多优势。虽然已经提出了许多方法来获得高精度的单倍型,但快速准确地解决单倍型组装仍然是一个具有挑战性的问题。高通量序列数据的庞大和人类基因组的长度强调了算法速度的重要性。在本文中,我们提出了QuickHap,一种启发式算法,以实现高速度的单倍型和可接受的精度。我们的算法包含两个阶段;首先,在几次迭代中构建和扩展部分单倍型。在这一阶段,我们利用一个新的度量来衡量每次迭代中重建的单倍型的质量,以获得最优解。第二阶段用于改进重建的单倍型以提高准确性。结果表明,该方法能较好地重建单倍型。它在速度上优于比较方法,特别是在处理高覆盖率测序数据方面。
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引用次数: 0
Fully Automated Centrifugal Microfluidic Disc for Qualitative Evaluation of Rheumatoid Factor (RF) Utilizing Portable and Low-Cost Centrifugal Device 利用便携式低成本离心装置进行类风湿因子定性评价的全自动离心微流控盘
Pub Date : 2022-12-21 DOI: 10.1109/ICBME57741.2022.10052878
R. Khodadadi, Alireza Balaei, M. Eghbal, J. Fallah, K. Abrinia
Rheumatoid factor is a biomarker for diagnosing rheumatoid arthritis and other inflammatory diseases, and latex agglutination is a qualitative method for Rheumatoid factor evaluation. In this study, in addition to manufacturing a portable and low-cost centrifugal device, a microfluidic disc was designed and manufactured to meter 400 µl of a whole blood sample. Next, it separates serum from whole blood and meters 40 µl of serum to mix it with coated latex buffer on the detection chamber surfaces. Finally, Qualitative examinations of the mixed samples were performed by checking the detection chambers, positive or negative in terms of agglutination. As a result, 100% agreement was observed between manual and microfluidic disc-based methods. Accordingly, centrifugal microfluidic discs showed excellent potential for integrating and automating several latex-based assays such as C-Reactive Protein (CRP), D-dimer, and blood type in a disc for utilization in a low resource setting, clinics, and as a point of care test (POC).
类风湿因子是诊断类风湿关节炎等炎性疾病的生物标志物,胶乳凝集是类风湿因子评价的定性方法。在本研究中,除了制造便携式和低成本的离心装置外,还设计并制造了一个微流控盘,用于测量400µl的全血样本。然后,从全血中分离血清,取40µl血清,与涂布乳胶缓冲液混合在检测室表面。最后,通过检查检测室对混合样品进行定性检查,根据凝集情况进行阳性或阴性检查。结果,在手动和基于微流控盘的方法之间观察到100%的一致性。因此,离心微流控圆盘在整合和自动化几种基于乳胶的检测方面表现出了极好的潜力,如c -反应蛋白(CRP)、d -二聚体和血型检测,可用于低资源环境、诊所和护理点检测(POC)。
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引用次数: 0
Fault Detection of Piezoelectric Array Element Using Acoustic Field and Particle Swarm Optimization 基于声场和粒子群优化的压电阵列元件故障检测
Pub Date : 2022-12-21 DOI: 10.1109/ICBME57741.2022.10052990
M. S. Z. Dehabadi, M. Jahed
Medical ultrasonic array transducers are prone to various defects due to hardware malfunction, mechanical damages, aging, and fatigue issues. Faulty elements result in distorted acoustic field, higher side lobe level (SLL), and image resolution degradation. Fault detection of piezoelectric array element is an obvious and important prerequisite for any restoration or compensative reaction. In this work, an inverse optimization approach on the few measured samples of the radiated acoustic field is proposed to estimate the contribution of the element, its position and severity of its faulty condition. The proposed method is evaluated by 100 random simulated test datasets, based on finite element model (FEM) of a linear array transducer. Three element faulty types inclusive of Intact,Weak, and Dead, are considered in the datasets to measure a lateral profile of the radiated far-field acoustic field from the transducer. The problem on the acoustic field is solved by Particle Swarm Optimization (PSO) algorithm. The high detection accuracy of about 99%, as depicted in the results section, demonstrates the effectiveness of this method to detect Weak and Dead elements. The proposed method outperforms the electrical test equipment to check the sensitivity and capacitance of individual elements, especially for the 2D transducers containing large number of elements and physically unavailable sub-elements for the electrical tests.
由于硬件故障、机械损伤、老化和疲劳问题,医用超声阵列换能器容易出现各种缺陷。故障元件会导致声场失真、旁瓣电平(SLL)升高和图像分辨率下降。压电阵列元件的故障检测是进行任何修复或补偿反应的一个明显而重要的前提。本文提出了一种基于少量辐射声场测量样本的逆优化方法来估计元件的贡献、位置和故障状态的严重程度。基于线性阵列换能器的有限元模型,对该方法进行了100个随机模拟测试数据集的评估。数据集中考虑了三种元件故障类型,包括完好、弱和死,以测量来自换能器的辐射远场声场的横向剖面。利用粒子群优化算法求解声场问题。如结果部分所示,检测准确率高达99%左右,证明了该方法检测弱元素和死元素的有效性。该方法在检测单个元件的灵敏度和电容方面优于电试验设备,尤其适用于包含大量元件和物理上不可用的子元件进行电试验的二维传感器。
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引用次数: 0
Fabrication of MIL-100 (Fe) metal-organic framework nanocarrier for the controlled release of Paclitaxel against MCF-7 breast cancer cells MIL-100 (Fe)金属有机骨架纳米载体的制备及其对MCF-7乳腺癌细胞控释紫杉醇的作用
Pub Date : 2022-12-21 DOI: 10.1109/ICBME57741.2022.10053070
Navid Razavi, N. Nemati, S. Sardari
Metal-organic frameworks (MOFs) are suitable as carriers for drug delivery systems (DDSs) due to their large specific surface area and high biocompatibility. In the present study, paclitaxel (PTX) as an anticancer drug was loaded into MIL-100 (Fe) to reduce the abuse side effects of PTX and enhance its efficacy through the controlled release of PTX from MOF. MIL-100 (Fe) was synthesized via the hydrothermal technique and characterized through BET, FESEM, FTIR, and XRD analysis. The BET surface area of MIL-100 (Fe) was found to be 1336 m2g-1. Drug release profiles from synthesized MIL-100 (Fe) and pharmacokinetic studies were investigated. The PTX release data of MIL-100 (Fe) was evaluated under pH values of 5.5, and 7.4, at temperatures of 37 °C. The biocompatibility of drug-loaded MIL-100 (Fe) was also assessed by incubating them in MCF-7 breast cancer cells. The maximum cytotoxicity of MCF-7 cancer cells treated with MIL-100 (Fe)/PTX 10 µg mL-1 was found to be 77%. It can be concluded that MIL-100 (Fe) can be used as an effective pH-sensitive carrier to load anticancer drugs. Therefore, all these findings indicate that MIL-100(Fe) is a promising drug delivery platform for PTX and the treatment of various cancers.
金属有机骨架(mof)具有比表面积大、生物相容性好等优点,适合作为药物递送系统的载体。本研究将紫杉醇(PTX)作为抗癌药物加载到MIL-100 (Fe)中,通过MOF控释PTX来减少PTX的滥用副作用,提高其疗效。采用水热法合成了MIL-100 (Fe),并通过BET、FESEM、FTIR和XRD分析对其进行了表征。MIL-100 (Fe)的BET表面积为1336 m2g-1。研究了合成MIL-100 (Fe)的药物释放谱和药代动力学研究。MIL-100 (Fe)的PTX释放数据在pH值为5.5和7.4,温度为37°C下进行评估。MIL-100 (Fe)在MCF-7乳腺癌细胞中的生物相容性也得到了评价。MIL-100 (Fe)/PTX 10µg mL-1对MCF-7癌细胞的最大细胞毒性为77%。MIL-100 (Fe)可以作为一种有效的ph敏感载体来装载抗癌药物。因此,这些研究结果表明MIL-100(Fe)是一个很有前景的PTX和各种癌症治疗的药物传递平台。
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引用次数: 0
Microstructured Droplet Based Porous Capacitive Pressure Sensor 基于微结构液滴的多孔电容压力传感器
Pub Date : 2022-12-21 DOI: 10.1109/ICBME57741.2022.10053042
Mohammad Mahdi Eskandari Sani, Mahdi Aliverdinia, R. Javidi, Shaghayegh Mirhosseini, M M Zand
Devices that imitate the functions of human skin are known as “electronic skin,” and they must have characteristics like high sensitivity, a wide dynamic range, high spatial homogeneity, cheap cost, wide area easy processing, and the ability to distinguish between diverse external inputs. Here, we describe a flexible droplet-based microfluidic-assisted emulsion self-assembly (DMESA) method for producing highly efficient capacitive pressure sensors based on three-dimensional microstructures for electronic skin applications. Our method may produce evenly sized micropores that self-assemble across a vast area in an ordered close-packed manner, leading to excellent spatial homogeneity. Dynamic amplitude and sensitivity were readily regulated to as high as 0.62 kPa -1and up to 100 kPa by adjusting the micropore size, which can be simply adjusted from 100 to 600 µm. Our gadget may be molded into a variety of forms and printed on curved surfaces. These examples show how our method and sensors may be used for a broad range of e-skin applications.
模仿人体皮肤功能的设备被称为“电子皮肤”,它们必须具有高灵敏度、宽动态范围、高空间同质性、低成本、广域易处理以及区分不同外部输入的能力等特点。在这里,我们描述了一种基于柔性液滴的微流体辅助乳液自组装(DMESA)方法,用于生产基于三维微结构的高效电容压力传感器,用于电子皮肤应用。我们的方法可以产生均匀大小的微孔,这些微孔在大面积上以有序的紧密排列方式自组装,从而产生优异的空间均匀性。通过调节微孔大小,动态振幅和灵敏度可以轻松调节到0.62 kPa -1和100 kPa,微孔大小可以简单地从100µm调节到600µm。我们的小工具可以被塑造成各种各样的形状,并印刷在曲面上。这些例子展示了我们的方法和传感器如何用于广泛的电子皮肤应用。
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引用次数: 0
Patient-Specific Study of Post-Ischemic Cardiac Ventricular Remodeling: A Passive Simulation of Structural Changes in Myofiber Orientation and Stiffness 缺血后心室重构的患者特异性研究:肌纤维取向和硬度结构变化的被动模拟
Pub Date : 2022-12-21 DOI: 10.1109/ICBME57741.2022.10052847
Saeed Torbati, Alireza Heidari, A. Daneshmehr, H. Pouraliakbar, S. H. Tafti, D. Shum-Tim
Despite recent advances in the computational modeling of cardiovascular diseases and therapies, the effect of post-ischemic remodeling has not been thoroughly studied while considering the unloaded ventricles. Further evaluation is, therefore, needed in order to better understand the effect of alterations in myocardial structure. Herein, we have developed a patient-specific computational model of ischemic cardiomyopathy to assess the influence of microstructure and material change on passive ventricular mechanics. The biventricular geometry has been built and unloaded based on cardiac magnetic resonance (CMR) images of a 64-year-old male patient at end-diastole (ED). Different fiber orientations and material scales were assumed for the model. Results indicated that although some fiber structures produce similar end-diastolic pressure-volume relationships (EDPVRs), differences in initial stress-free shapes and strain patterns determine the subsequent damage to the myocardium. Moreover, stiffening the healthy region means lower myofiber strain. However, material change in the ischemic areas of the ventricles does not alter the passive fiber strain considerably. Such evaluations are required when choosing optimal therapies to alleviate the adverse effects of ischemic cardiomyopathy.
尽管最近在心血管疾病的计算建模和治疗方面取得了进展,但考虑到无负荷心室,缺血后重构的影响尚未得到充分研究。因此,为了更好地了解心肌结构改变的影响,需要进一步的评估。在此,我们开发了一种缺血性心肌病患者特异性计算模型,以评估微观结构和材料变化对被动心室力学的影响。根据一名64岁男性舒张末期(ED)患者的心脏磁共振(CMR)图像,建立和卸载了双心室几何结构。模型假设了不同的纤维取向和材料尺度。结果表明,尽管一些纤维结构产生相似的舒张末期压力-容量关系(EDPVRs),但初始无应力形状和应变模式的差异决定了随后对心肌的损伤。此外,使健康区域变硬意味着肌纤维张力降低。然而,脑室缺血区域的物质变化不会显著改变被动纤维应变。在选择最佳治疗方法以减轻缺血性心肌病的不良反应时,需要进行此类评估。
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引用次数: 1
Measurements of the Lumbar Spine Anatomical Parameters for Use in Musculoskeletal Modeling 用于肌肉骨骼建模的腰椎解剖参数测量
Pub Date : 2022-12-21 DOI: 10.1109/ICBME57741.2022.10052881
Shirin Farsi, S. Naserkhaki
Basic information of anatomical parameters such as cross-sectional area (CSA) and moment arms (MA) of muscles are required for musculoskeletal modeling. Previous studies outlined muscle parameters based on in vivo imaging but extracting these data is invasive and costly. To provide a more realistic musculoskeletal model, for the profile of each individual lumbar spine, 3D vertebral model of each individual was constructed and the anterior-posterior (AP) and medial-lateral (ML) cross-sectional areas (CSAs) and moment arms of all muscles at each lumbar disc level were measured and all these parameters obtained from CT scan images. The CSA of spinal muscles had significant difference between men and women at all muscles and most of level as well as the AP and ML muscles moment arm were significantly different between men and women at all muscles and spinal levels. The geometrical data of the group of subjects of this study can utilized for development of subject-specific model and can help assess spinal loads in different tasks.
肌肉骨骼建模需要肌肉的横截面积(CSA)和力臂(MA)等解剖学参数的基本信息。先前的研究概述了基于体内成像的肌肉参数,但提取这些数据是侵入性的和昂贵的。为了提供更真实的肌肉骨骼模型,针对每个个体腰椎的轮廓,我们构建了每个个体的三维椎体模型,并测量了每个腰椎间盘水平处所有肌肉的前后(AP)和中外侧(ML)横截面积(csa)和力臂,这些参数均来自CT扫描图像。男女脊柱肌CSA在各肌肉和大部分水平上均有显著差异,AP和ML肌肉力臂在各肌肉和脊柱水平上均有显著差异。本研究受试者组的几何数据可用于受试者特定模型的开发,并可帮助评估不同任务下的脊柱负荷。
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引用次数: 0
Biomechanical Analysis of A Mini Force-Closed Cemented Hip Stem for Juvenile Arthritis Patients 小型力封闭骨水泥髋关节干治疗青少年关节炎的生物力学分析
Pub Date : 2022-12-21 DOI: 10.1109/ICBME57741.2022.10053080
Yashar Ebadi, F. Farahmand
Standard implants are available in a wide variety of models and sizes to meet the needs of the normal population. Such implants, however, cannot be used for patients with abnormal hip joint anatomy. This study assessed the mechanical strength and the range of motion of a mini stem, designed for juvenile arthritis patients with substantially small femoral bones. The geometry of the mini stem, designed based on the cemented force-closed philosophy, was determined such that it could accommodate in the very narrow intramedullary canal of a sample patient. A 3D finite element model of the bone-cement-implant construct was developed to assess the strength of the mini stem against yield and fatigue failure, the strength of the cement mantle against yield, and the subsidence of the stem in cement due to the cement creep. Also, the range of motion of the hip implant was estimated by an impingement analysis in which the interference of the femur-pelvis or stem-acetabular cup was examined while rotating the femoral bone in the anatomical planes. Results indicated factors of safety of 7.33 and 4.76 for the mini stem against yield and fatigue failure, and 4 for the cement against yield. The subsidence of the mini stem in the cement over time was obtained as 1.6 micrometers for a 50-hour loading period. Finally, the designed implant could provide large ranges of motion in different planes with no impingement between the implant components and the bones in daily activities. It was concluded that the designed mini stem could satisfy the biomechanical requirements for successful total hip arthroplasty of juvenile arthritis patients.
标准植入物有各种各样的模型和尺寸,以满足正常人群的需求。然而,这种植入物不能用于髋关节解剖结构异常的患者。本研究评估了微型骨柄的机械强度和活动范围,该微型骨柄是为患有小股骨的幼年关节炎患者设计的。基于骨水泥力封闭原理设计的迷你柄的几何形状被确定为可以容纳样本患者非常狭窄的髓内管。开发了骨-水泥-种植体结构的三维有限元模型,以评估微型骨杆抗屈服和疲劳破坏的强度,水泥套抗屈服的强度,以及由于水泥蠕变导致的骨杆在水泥中的下沉。此外,髋骨植入物的运动范围是通过撞击分析来估计的,其中当在解剖平面上旋转股骨时,检查股骨-骨盆或茎-髋臼杯的干扰。结果表明,微型管柱抗屈服和抗疲劳失效的安全系数分别为7.33和4.76,水泥抗屈服的安全系数分别为4。在50小时的加载周期内,迷你杆在水泥中的沉降量为1.6微米。最后,设计的种植体可以在不同平面上提供大范围的运动,并且在日常活动中种植体组件与骨骼之间没有碰撞。结果表明,所设计的微型假体可以满足青少年关节炎患者全髋关节置换术成功的生物力学要求。
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引用次数: 0
Three-Dimensional Finite Element Analysis of a Complete Segment in the Lumbar Region (L3-L4) Under the Influence of Cage with Titanium and Peek Materials 钛和Peek材料笼对腰椎(L3-L4)完整节段影响的三维有限元分析
Pub Date : 2022-12-21 DOI: 10.1109/ICBME57741.2022.10052998
Masoome Moradiniya, Hasan Asadi
The vertebrae are irregular bones with very complex shapes, which the study of the stress and strain distribution in them help to identify and evaluate their behavior. • Several biomechanical studies have been performed to improve the use of peek (Poly Ether Ether Ketone) or titanium cage for posterior lumbar intervertebral fusion (PLIF). This study was conducted to evaluate the biomechanical effect of these implants with different levels of hardness. So that for peek implants, the viscoelastic properties and elastic specific titanium implants are posed. To analyze the mechanical behaviors of a complete segment of the spine, a cage is initially designed in the SALIDWORK software, including the well-known cages for spinal vertebrae fusion, as well as two L3 and L4 vertebrae are designed in Abacus software and it is assembled with cage, the disk between the L3 and L4 vertebrae. According to the results obtained, the stress and strain rate in the vertebrae and cage with the peek material (due to the viscoelastic properties discussed in it) is significantly reduced compared to the titanium material, which is in good agreement with previous studies.
脊椎骨是形状非常复杂的不规则骨骼,研究其应力和应变分布有助于识别和评估其行为。•一些生物力学研究已经进行,以改善peek(聚醚醚酮)或钛笼在后路腰椎椎间融合术(PLIF)中的应用。本研究旨在评估这些不同硬度的植入物的生物力学效果。因此,对于peek植入物,提出了粘弹性性能和弹性特异性钛植入物。为了分析一段完整脊柱的力学行为,在SALIDWORK软件中初步设计了一个cage,包括众所周知的脊柱融合cage,并在Abacus软件中设计了两个L3和L4椎体,并与cage、L3和L4椎体之间的椎间盘组合在一起。根据得到的结果,与钛材料相比,peek材料(由于其中讨论的粘弹性特性)显著降低了椎体和笼内的应力应变率,这与先前的研究结果很好地吻合。
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引用次数: 0
期刊
2022 29th National and 7th International Iranian Conference on Biomedical Engineering (ICBME)
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