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Effect of adamantane derivative on expression of biofilm-associated genes in methicillin-resistant Staphylococcus aureus 金刚烷衍生物对耐甲氧西林金黄色葡萄球菌生物膜相关基因表达的影响
Q2 Medicine Pub Date : 2023-06-01 DOI: 10.1016/j.medidd.2023.100155
Nataliia Humeniuk , Liubov Zelena , Nina Vrynchanu , Liudmyla Ishchenko , Tetiana Bukhtiarova , Yurii Korotkij , Elena Vazhnichaya

In the etiology of nosocomial infections, the leading role belongs to such microorganisms as Staphylococcus aureus. Insufficient effectiveness of antimicrobial chemotherapy and practical absence of drugs with an antibiofilm activity encourage the development of new remedies. The study presents results on antibiofilm activity of the adamantane derivative 1-[4-(1-adamantyl)phenoxy]-3-(N-benzyl,N-dimethylamino)-2-propanol chloride (KVM-97) against methicillin-resistant S. aureus (MRSA) and the effect of this agent on the expression genes that provide regulatory and biosynthetic functions of biofilms. The ability of adamantane derivative to affect S. aureus biofilms was tested by microtiter dish biofilm formation assay. The effect of KVM-97 on expression level of genes icaA, icaD, icaR, agrA, sarA, clfB, fib, fnbB, ebpS, and eno was detected by the real-time PCR. The KVM-97 inhibits the formation of S. aureus biofilms at 5.0 MIC by 95.1 % and at 0.5 MIC – by 22.4 %. Under the action of KVM-97, destruction of the mature biofilms was not detected. It inhibits expression of the icaADBC operon and agrA gene, as well as stimulates a transcriptional activity of the icaR regulator. Subinhibitory concentrations of the KVM-97 significantly inhibit the expression of clfB, fib, fnbB, ebpS, and eno, but does not change the sarA gene expression. Thus, 1-[4-(1-adamantyl)phenoxy]-3-(N-benzyl,N-dimethylamino)-2-propanol chloride shows pronounced antibiofilm activity against MRSA at the early stages of the biofilm forming. This effect may be relating to influence on the expression of genes that regulate adhesion to the substrate and formation of S. aureus biofilms.

在医院感染的病因中,起主导作用的是金黄色葡萄球菌等微生物。抗微生物化疗的有效性不足,以及实际上缺乏具有抗生物膜活性的药物,都鼓励了新疗法的开发。本研究介绍了金刚烷衍生物1-[4-(1-金刚烷基)苯氧基]-3-(N-苄基,N-二甲基氨基)-2-丙醇氯(KVM-97)对耐甲氧西林金黄色葡萄球菌(MRSA)的抗生物膜活性,以及该制剂对提供生物膜调节和生物合成功能的表达基因的影响。金刚烷衍生物影响金黄色葡萄球菌生物膜的能力通过微量滴定皿生物膜形成试验进行测试。通过实时PCR检测KVM-97对基因icaA、icaD、icaR、agrA、sarA、clfB、fib、fnbB、ebpS和eno表达水平的影响。KVM-97在5.0 MIC和0.5 MIC下分别抑制金黄色葡萄球菌生物膜的形成95.1%和22.4%。在KVM-97的作用下,未检测到成熟生物膜的破坏。它抑制icaADBC操纵子和agrA基因的表达,并刺激icaR调节因子的转录活性。亚抑制浓度的KVM-97显著抑制clfB、fib、fnbB、ebpS和eno的表达,但不改变sarA基因的表达。因此,1-[4-(1-金刚烷基)苯氧基]-3-(N-苄基,N-二甲基氨基)-2-丙醇氯化物在生物膜形成的早期阶段显示出对MRSA的显著抗生物膜活性。这种效应可能与对调节与基质粘附和金黄色葡萄球菌生物膜形成的基因表达的影响有关。
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引用次数: 0
Fluid mechanics in circulating tumour cells: Role in metastasis and treatment strategies 循环肿瘤细胞的流体力学:在转移中的作用及治疗策略
Q2 Medicine Pub Date : 2023-06-01 DOI: 10.1016/j.medidd.2023.100158
Shivam Rajput, Pramod Kumar Sharma, Rishabha Malviya

Cancer patients have a shorter life expectancy because of metastasis, which is the dynamic chain of events that leads to the spread of tumour cells to distant places inside the body. Cancer's development, spread, metastasis, and treatment all involve fluid mechanics in some way. Cancer cells and their associated components take advantage of the body's many fluid systems as a means of dissemination throughout the body and colonisation of distant organs. Cancerous tissues rely on the blood supply for oxygen and nutrition, metastasis to other organs, and medication delivery. Cancer cells' ability to travel from the main tumour, extravasate, and seed metastases can be enhanced by exploiting the flow mechanics of the blood and lymphatic circulatory systems. Cancer cell survival in the circulation and the regulation of organotropic seeding patterns are affected by flow rates, channel size, and shear stress. Therefore, cancer cells not only use these fluids as a mode of transport throughout the body, but also as a fertile ground to seed distant metastases by taking advantage of the fundamental physical forces among these fluids. Metastasis, tumor growth, & nanoparticle-mediated medication delivery is all under the control of multiscale flow-structure interaction processes, whereas an increase in interstitial pressure is caused by the tumour vasculature's irregularity and leakiness. This Review discusses the role that fluids play in metastasis, including the forces and stresses that are utilised by circulating tumour cells & tumour-associated factors. Given the intriguing concerns raised by the role of physiological fluids and their mechanics in the biology of the metastatic cascade, gaining insight into this process may reveal a novel strategy for intercepting cancer cells on their route.

癌症患者的预期寿命较短,因为转移是导致肿瘤细胞扩散到体内远处的动态事件链。癌症的发展、扩散、转移和治疗都在某种程度上涉及流体力学。癌症细胞及其相关成分利用身体的许多流体系统,作为在全身传播和远处器官定植的手段。癌症组织依赖血液供应氧气和营养,转移到其他器官,以及药物输送。癌症细胞从主要肿瘤、外渗和种子转移转移的能力可以通过利用血液和淋巴循环系统的流动机制来增强。癌症细胞在循环中的存活和器官生长模式的调节受到流速、通道大小和剪切应力的影响。因此,癌症细胞不仅将这些液体用作全身的运输模式,而且还将其作为肥沃的土壤,通过利用这些液体中的基本物理力来播种远处转移。转移,肿瘤生长;纳米粒子介导的药物递送都在多尺度流动-结构相互作用过程的控制下,而间质压力的增加是由肿瘤血管系统的不规则性和渗漏引起的。这篇综述讨论了液体在转移中的作用,包括循环肿瘤细胞利用的力和应力;肿瘤相关因素。鉴于生理液及其机制在转移级联生物学中的作用引起了人们的关注,深入了解这一过程可能会揭示一种新的策略来拦截癌症细胞。
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引用次数: 3
Modality diversification and best-in-class small-molecule drugs: Recent trend of orphan drug development 形态多样化和一流的小分子药物:孤儿药发展的最新趋势
Q2 Medicine Pub Date : 2023-06-01 DOI: 10.1016/j.medidd.2023.100156
Ryo Okuyama

Only 5% of orphan diseases have approved drugs, leading to a high demand for new treatment. As a result, pharmaceutical companies have shifted their focus of drug development to orphan diseases. This study conducted a database search to analyze the modality and development strategy of orphan drugs approved by the Food and Drug Administration from 2011 to 2022. The analysis showed that the modalities used for orphan drugs have diversified with increasing emergence of nucleic acid drugs, gene therapies, cell therapies, antibody drugs including next-generation antibodies, and engineered proteins, suggesting that modality diversification enhances the drug development for orphan diseases that are otherwise challenging to treat with conventional drugs. The ratio of orphan drugs targeting only a single disease has increased, likely due to the emergence of gene-specific treatments such as nucleic acid drugs and gene therapies. Moreover, this study found that orphan drugs using different modalities have been competitively developed with the same mechanism of action targeting only a single orphan disease in recent years. In several cases, small-molecule drugs with unique characteristics offer advantages such as dosing convenience and non-genetic patient coverage over nucleic acid drugs, antibody drugs, and gene therapy. These trends suggest the importance of modality technology development and advancement of small molecule optimization technology for future orphan drug development.

只有5%的孤儿疾病获得了药物批准,这导致对新治疗的需求很高。因此,制药公司将药物开发的重点转移到了孤儿疾病上。本研究进行了数据库检索,分析了2011-2022年美国食品药品监督管理局批准的孤儿药的模式和开发策略。分析表明,随着核酸药物、基因疗法、细胞疗法、抗体药物(包括下一代抗体)和工程蛋白的日益出现,孤儿药物的使用模式已经多样化,这表明模式多样化促进了孤儿疾病的药物开发,否则用常规药物治疗是很有挑战性的。仅针对单一疾病的孤儿药物比例有所增加,这可能是由于核酸药物和基因疗法等基因特异性治疗方法的出现。此外,这项研究发现,近年来,使用不同模式的孤儿药物以相同的作用机制竞争性地开发出来,只针对一种孤儿疾病。在某些情况下,与核酸药物、抗体药物和基因治疗相比,具有独特特征的小分子药物具有给药方便和非基因患者覆盖率等优势。这些趋势表明了模态技术的发展和小分子优化技术的进步对未来孤儿药开发的重要性。
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引用次数: 0
Comparing monopharmacotherapy of antiarrhythmic and anticoagulant drugs with other drugs for atrial fibrillation: A complete review of clinical trials 比较抗心律失常和抗凝药物单药治疗与其他药物治疗心房颤动:临床试验的完整回顾
Q2 Medicine Pub Date : 2023-06-01 DOI: 10.1016/j.medidd.2023.100154
Akshat D. Modi , Yajan N. Pancholi , Dharmeshkumar M. Modi

Atrial fibrillation (AF) is a life-changing and life-threatening cardiac electropathological condition, especially in patients with prior history of cardiovascular diseases. This multifaceted condition is one of the top 5 leading causes of cardiovascular death with a rapidly increasing prevalence and death rate. From inception till now, numerous clinical trials have been conducted to explore novel therapeutic targets and strategies along with pre-existing treatments for patients suffering from atrial fibrillation. The pharmacotherapy approach to treat AF (acute, chronic, persistent, paroxysmal, non-valvular, nonrheumatic, and rapid) comprises mainly antiarrhythmic drugs (AAD) and anticoagulant drugs (ACD) for rate and rhythm control along with the prevention of strokes. This narrative review aims to discuss monotherapeutic clinical trials that compared AADs (class II: carvedilol and xamoterol; class III: amiodarone; class IV: verapamil, diltiazem, and nifedipine) and ACDs (vitamin K antagonist: warfarin; factor Xa inhibitor: apixaban; factor IIa and Xa inhibitor: heparin) with cardiac glycoside (digoxin), angiotensin II receptor antagonist (telmisartan), platelet inhibitor (indobufen), anti-convulsant (magnesium sulfate), anti-inflammatory (aspirin), and antipyretic drugs (aspirin) to treat various types of AF in patients with a diverse history of cardiovascular diseases. This study provides a review of all clinical trials on this topic and provides a comparative chart for healthcare professionals to determine the best-suited treatment for their patients.

心房颤动(AF)是一种改变生命、危及生命的心脏电病理学疾病,尤其是有心血管病史的患者。这种多方面的疾病是心血管死亡的五大主要原因之一,发病率和死亡率迅速上升。从一开始到现在,已经进行了大量的临床试验,以探索新的治疗靶点和策略,以及对心房颤动患者已有的治疗方法。治疗房颤(急性、慢性、持续性、阵发性、非瓣膜性、非风湿性和快速)的药物治疗方法主要包括抗心律失常药物(AAD)和抗凝药物(ACD),用于控制心率和节律以及预防中风。这篇叙述性综述旨在讨论将AADs(II类:卡维地洛和沙莫特罗;III类:胺碘酮;IV类:维拉帕米、地尔硫卓和硝苯地平)和ACDs(维生素K拮抗剂:华法林;Xa因子抑制剂:阿哌沙班;IIa因子和Xa抑制剂:肝素)与强心苷(地高辛)、血管紧张素II受体拮抗剂(替米沙坦),血小板抑制剂(吲哚布芬)、抗惊厥药(硫酸镁)、抗炎药(阿司匹林)和解热药物(阿司匹林),用于治疗有不同心血管病史的患者的各种类型的房颤。这项研究对该主题的所有临床试验进行了回顾,并为医疗保健专业人员提供了一张比较图表,以确定最适合患者的治疗方法。
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引用次数: 0
Drug binding and drug-drug interaction considerations in individuals with obesity before and after bariatric surgery: A retrospective cross-sectional study 肥胖患者在减肥手术前后药物结合和药物相互作用的考虑因素:一项回顾性横断面研究
Q2 Medicine Pub Date : 2023-06-01 DOI: 10.1016/j.medidd.2023.100152
Emerita Quintina de Andrade Moura , Carolina Dumke de Siqueira , Ana Carolina Martins , Bruno Fonseca Nunes , Ana Carolina Rabello de Moraes , Fabíola Branco Filippin-Monteiro

Obesity impacts pharmacokinetic and pharmacodynamic parameters, changing the drug-binding state via plasma proteins, which is critical for drug effectiveness and toxicity. Albumin and α1-acid glycoprotein (AAG) are the two main proteins accountable for drug binding in humans. Previous studies have shown higher values of AAG in individuals with obesity, but the interference of AAG in the pharmacokinetics of drugs remains unclear. We, therefore, aimed to analyze the pharmacotherapeutic profile and interfering factors in patients undergoing bariatric surgery in the pre-operative period and after 12 months. A retrospective cross-sectional study design was conducted and serum AAG was determined, and potential drug-drug interactions were monitored in patients with severe obesity who underwent bariatric surgery. The drug classes most used were antidepressants, cardiovascular agents, and lipid-modifying agents, with a decrease in use after 12 months of surgery. Before surgery, it was found that more than half of the patients had at least one drug interaction in their therapeutic regimen. Of these, most were classified as moderate. After surgery, a decrease in drug interaction was observed. Serum AAG showed a significant reduction after 12 months, which can influence the free fraction of drugs with a high-affinity rate and how they impact therapeutic efficacy.

肥胖影响药代动力学和药效学参数,通过血浆蛋白改变药物结合状态,这对药物有效性和毒性至关重要。白蛋白和α1-酸性糖蛋白(AAG)是人类与药物结合的两种主要蛋白质。先前的研究表明,AAG在肥胖患者中的值更高,但AAG对药物药代动力学的干扰尚不清楚。因此,我们旨在分析术前和术后12个月接受减肥手术的患者的药物治疗概况和干扰因素。对接受减肥手术的严重肥胖患者进行了回顾性横断面研究设计,测定了血清AAG,并监测了潜在的药物相互作用。最常用的药物类别是抗抑郁药、心血管药物和脂质修饰剂,手术12个月后使用量有所减少。手术前,发现超过一半的患者在治疗方案中至少有一种药物相互作用。其中,大多数被归类为中度。手术后,观察到药物相互作用减少。12个月后,血清AAG显著降低,这会影响具有高亲和力的药物的游离部分以及它们如何影响疗效。
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引用次数: 1
Potent anti-Toxoplasma gondii activity of 4-chlorophenylthioacetone-derived thiosemicarbazones: Involvement of CCR2 and CCR5 receptors and 5-lipoxygenase in the mode of action 4-氯苯基硫代丙酮衍生的硫代氨基脲类抗刚地弓形虫活性:CCR2和CCR5受体和5-脂氧合酶参与作用模式
Q2 Medicine Pub Date : 2023-06-01 DOI: 10.1016/j.medidd.2023.100157
Rayane Aparecida Nonato Rabelo , Diego Rodney Rodrigues de Assis , Alexandre Almeida Oliveira , César Luís Nascimento Barbosa , Rafaela das Dores Pereira , Ricardo Wagner de Almeida Vitor , Wiliam César Bento Régis , Mauro Martins Teixeira , Heloísa Beraldo , Fabiana Simão Machado

Toxoplasmosis is a disease requiring therapeutic innovation, and thiosemicarbazones with antimicrobial activity are candidates to control Toxoplasma gondii infection. Here, the anti-T. gondii activities of (E)-2-(1-(4-chlorophenylthio)propan-2-ylidene)-hydrazinecarbothioamides (Ca and Cb) were investigated. T. gondii-infected macrophages (MOs) or glial cells treated with Ca or Cb showed a decrease in the number of intracellular parasites. A deficiency in the chemokine receptor CCR2, but not CCR5, partially reduced anti-T. gondii activity induced by Ca or Cb. In contrast, a deficiency in 5-lipoxygenase (5-LO) activity potentiated anti-T. gondii activities induced by these compounds. In vivo treatment with Ca increased the survival of T. gondii-infected wild-type mice, and this was associated with increased IFN-γ and IL-12 production. A deficiency in CCR5 or CCR2 abolished the protective effect of Ca treatment in vivo, while a deficiency in 5-LO increased Cb anti-T. gondii effects. Collectively, our data suggest that Ca and Cb are potential therapeutic candidates for the treatment of toxoplasmosis.

弓形虫病是一种需要创新治疗的疾病,具有抗菌活性的氨基硫脲是控制弓形虫感染的候选药物。在这里,抗T。研究了(E)-2-(1-(4-氯苯基硫基)丙-2-亚基)-肼甲硫酰胺(Ca和Cb)的弓形虫活性。弓形虫感染的巨噬细胞(MO)或用Ca或Cb处理的神经胶质细胞显示出细胞内寄生虫数量的减少。趋化因子受体CCR2而非CCR5的缺乏部分降低了抗T。Ca或Cb诱导的弓形虫活性。相反,5-脂氧合酶(5-LO)活性的缺乏增强了抗T。这些化合物诱导的弓形虫活性。Ca的体内治疗增加了弓形虫感染的野生型小鼠的存活率,这与IFN-γ和IL-12的产生增加有关。CCR5或CCR2的缺乏消除了体内Ca处理的保护作用,而5-LO的缺乏增加了Cb抗T。贡迪效应。总之,我们的数据表明,Ca和Cb是治疗弓形虫病的潜在候选治疗药物。
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引用次数: 0
Mechanism-based approaches of 1,3,4 thiadiazole scaffolds as potent enzyme inhibitors for cytotoxicity and antiviral activity 1,3,4-噻二唑支架作为细胞毒性和抗病毒活性的强效酶抑制剂的机制研究
Q2 Medicine Pub Date : 2023-02-01 DOI: 10.1016/j.medidd.2022.100150
Davinder Kumar , Harsh Kumar , Virender Kumar , Aakash Deep , Aastha Sharma , Minakshi Gupta Marwaha , Rakesh Kumar Marwaha

Significant progress in understanding cancer pathogenesis, it remains one of the leading causes of death after cardiovascular diseases. Similarly viral infections have emerged from wildlife or re-emerged, generating serious threats to the global health. As a result, there is an urgent need for the development of novel, more effective anticancer and antiviral therapeutics. Scientists, medicinal chemists and researchers are continuously finding novel targets, mechanisms and molecules against theses severe and dangerous infections. Therefore, ongoing extensively study and research emphasizes 1,3,4 thiadiazole pharmacophore have versatile pharmacological actions. Due to mesoionic behaviour of 1,3,4 thiadiazole pharmacophore allows to enter and easily cross biological membrane which allow to interact various biological proteins. In this review study an attempt has been made of various mechanisms involved in cancer and viral prevalence with updated studies done so far. This review study also findings the role of 1,3,4 thiadiazole motif in the management of various cancers and viral infection. This study also highlighting research statics on clinical trials and various patents containing 1,3,4 thiadiazole derivatives.

在理解癌症发病机制方面取得了重大进展,它仍然是心血管疾病后死亡的主要原因之一。类似的病毒感染也出现在野生动物身上或再次出现,对全球健康构成严重威胁。因此,迫切需要开发新的、更有效的抗癌和抗病毒疗法。科学家、药物化学家和研究人员正在不断寻找新的靶点、机制和分子来对抗这些严重和危险的感染。因此,正在进行的广泛研究强调1,3,4噻二唑药效团具有多种药理作用。由于1,3,4噻二唑药效团的介电行为,它可以进入并容易地穿过生物膜,从而与各种生物蛋白质相互作用。在这项综述研究中,对癌症和病毒流行的各种机制进行了尝试,并进行了迄今为止最新的研究。这项综述研究还发现了1,3,4噻二唑基序在治疗各种癌症和病毒感染中的作用。本研究还强调了含有1,3,4噻二唑衍生物的临床试验和各种专利的研究静态。
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引用次数: 5
Improved prediction of drug-drug interactions using ensemble deep neural networks 利用集成深度神经网络改进药物相互作用预测
Q2 Medicine Pub Date : 2023-02-01 DOI: 10.1016/j.medidd.2022.100149
Thanh Hoa Vo , Ngan Thi Kim Nguyen , Nguyen Quoc Khanh Le

Nowadays, combining multiple drugs is the optimal therapy to decelerate the pathologic process, which contains various underlying adverse effects due to drug-drug interactions (DDIs). Artificial intelligence (AI) has the potential to evaluate the interaction, pharmacodynamics, and possible side effects between drugs. Over the past years, many AI-based DDI prediction techniques, including both machine learning and deep learning, that harness available big data have been presented. Although significant progressives have been gained through previous methods, improvements are still crucial. In this work, we introduce an ensemble deep neural network that can help to improve the predictive performance of DDIs. As a result, our prediction model could predict 86 types of DDIs on a benchmark dataset with an average accuracy of 93.80%. Our ensemble classifier produces better performance when compared with the existing proposed methods on the same dataset. Our model's high performance places it among the top list of those well-built pharmacovigilance-assisted tools that facilitate the detection of DDIs to support medical decisions and drug development. We released our source codes and models at https://github.com/khanhlee/edn-ddi.

如今,联合多种药物是减缓病理过程的最佳治疗方法,病理过程中由于药物-药物相互作用(DDI)而产生各种潜在的不良反应。人工智能(AI)有潜力评估药物之间的相互作用、药效学和可能的副作用。在过去的几年里,已经提出了许多基于人工智能的DDI预测技术,包括机器学习和深度学习,这些技术利用了可用的大数据。尽管通过以前的方法取得了显著的进步,但改进仍然至关重要。在这项工作中,我们介绍了一种集成深度神经网络,它可以帮助提高DDI的预测性能。因此,我们的预测模型可以在基准数据集上预测86种类型的DDI,平均准确率为93.80%。与在同一数据集上提出的现有方法相比,我们的集成分类器具有更好的性能。我们的模型的高性能使其跻身于构建良好的药物警戒辅助工具之列,这些工具有助于DDI的检测,以支持医疗决策和药物开发。我们在上发布了源代码和模型https://github.com/khanhlee/edn-ddi.
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引用次数: 0
A review of the pharmacodynamic effect of chemo-herbal drug combinations therapy for cancer treatment 化疗-中草药联合治疗癌症的药效学效应综述
Q2 Medicine Pub Date : 2023-02-01 DOI: 10.1016/j.medidd.2022.100147
Ambrose Okem , Charlotte Henstra , Maarten Lambert , Rose Hayeshi

There is mounting evidence that cancer patients co-administer herbal drugs with chemotherapy, however, information on the pharmacodynamic (PD) effects of such combination therapy is scarce. Natural products including crude extracts, herbal formulas, and bioactive compounds from plants hold great potential to prevent and treat cancers. More importantly, some herbal drugs can reduce the incidence of chemotherapy-induced toxicity including oral mucositis, gastrointestinal toxicity, hepatotoxicity etc. This review focuses on the effectiveness of some herbal products as adjuvant therapy and describes the possible mechanisms of chemo-herbal drug PD interactions in enhancing the efficacy/ or reducing the side effects of chemotherapy. We also highlighted recent advances in preclinical in vitro and in vivo studies to establish the effectiveness of herbal medicine to enhance efficacy or counteract chemotherapy-induced side effects. In addition, we draw particular attention to the synergistic effects of chemo-herbal drug combination therapy to prevent and treat cancers using evidence from clinical trials. We concluded that herbal drugs hold great potential as adjuvant therapy for the prevention and treatment of chemotherapy-induced side effects. It is important to also highlight that the clinical evidence on chemo-herbal drug combination therapy is limited. There is an urgent need for an in-depth PD evaluation including the safety pharmacology of chemo-herbal drug combination therapy as well as reliable evidence from multicentre clinical trials to establish the beneficial or negative effects of chemo-herbal drug combination therapy in the ongoing fight against cancer.

越来越多的证据表明,癌症患者在化疗的同时服用草药,然而,关于这种联合治疗的药效学(PD)效果的信息很少。天然产品,包括植物提取物、草药配方和生物活性化合物,在预防和治疗癌症方面具有巨大潜力。更重要的是,一些草药可以降低化疗毒性的发生率,包括口腔粘膜炎、胃肠道毒性、肝毒性等。这篇综述的重点是一些草药产品作为辅助治疗的有效性,并描述了化疗-草药PD相互作用在增强化疗疗效/或减少化疗副作用方面的可能机制。我们还强调了临床前体外和体内研究的最新进展,以确定草药增强疗效或抵消化疗诱导的副作用的有效性。此外,我们利用临床试验的证据,特别注意化学-草药联合治疗对预防和治疗癌症的协同作用。我们的结论是,草药在预防和治疗化疗引起的副作用方面具有巨大的辅助治疗潜力。还需要强调的是,化学-草药联合治疗的临床证据是有限的。迫切需要对PD进行深入评估,包括化学-药物联合治疗的安全性药理学,以及来自多中心临床试验的可靠证据,以确定化学-药物组合治疗在正在进行的对抗癌症的斗争中的有益或负面影响。
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引用次数: 12
Repurposing of drugs for combined treatment of COVID-19 cytokine storm using machine learning 利用机器学习重新利用药物联合治疗新冠肺炎细胞因子风暴
Q2 Medicine Pub Date : 2023-02-01 DOI: 10.1016/j.medidd.2022.100148
Maanaskumar R. Gantla , Igor F. Tsigelny , Valentina L. Kouznetsova

Severe acute respiratory syndrome coronavirus 2 (SARS‑CoV‑2) induced cytokine storm is the major cause of COVID-19 related deaths. Patients have been treated with drugs that work by inhibiting a specific protein partly responsible for the cytokines production. This approach provided very limited success, since there are multiple proteins involved in the complex cell signaling disease mechanisms. We targeted five proteins: Angiotensin II receptor type 1 (AT1R), A disintegrin and metalloprotease 17 (ADAM17), Nuclear Factor‑Kappa B (NF‑κB), Janus kinase 1 (JAK1) and Signal Transducer and Activator of Transcription 3 (STAT3), which are involved in the SARS‑CoV‑2 induced cytokine storm pathway. We developed machine-learning (ML) models for these five proteins, using known active inhibitors. After developing the model for each of these proteins, FDA-approved drugs were screened to find novel therapeutics for COVID‑19. We identified twenty drugs that are active for four proteins with predicted scores greater than 0.8 and eight drugs active for all five proteins with predicted scores over 0.85. Mitomycin C is the most active drug across all five proteins with an average prediction score of 0.886. For further validation of these results, we used the PyRx software to conduct protein–ligand docking experiments and calculated the binding affinity. The docking results support findings by the ML model. This research study predicted that several drugs can target multiple proteins simultaneously in cytokine storm-related pathway. These may be useful drugs to treat patients because these therapies can fight cytokine storm caused by the virus at multiple points of inhibition, leading to synergistically effective treatments.

严重急性呼吸综合征冠状病毒2(SARS-CoV-2)诱导的细胞因子风暴是新冠肺炎相关死亡的主要原因。患者已经接受了通过抑制部分负责细胞因子产生的特定蛋白质来发挥作用的药物治疗。这种方法的成功非常有限,因为有多种蛋白质参与了复杂的细胞信号传导疾病机制。我们靶向了五种蛋白质:血管紧张素II受体1型(AT1R)、A去整合素和金属蛋白酶17(ADAM17)、核因子κB(NF-κB)、Janus激酶1(JAK1)和信号转导子和转录激活子3(STAT3),它们参与了严重急性呼吸系统综合征冠状病毒2诱导的细胞因子风暴途径。我们使用已知的活性抑制剂为这五种蛋白质开发了机器学习(ML)模型。在开发出每种蛋白质的模型后,美国食品药品监督管理局批准的药物进行了筛选,以寻找新的治疗COVID-19的药物。我们确定了20种对4种预测得分大于0.8的蛋白质有活性的药物,以及8种对所有5种预测得分超过0.85的蛋白质有活力的药物。丝裂霉素C是所有五种蛋白质中活性最高的药物,平均预测得分为0.886。为了进一步验证这些结果,我们使用PyRx软件进行了蛋白质-配体对接实验,并计算了结合亲和力。对接结果支持ML模型的发现。这项研究预测,几种药物可以同时靶向细胞因子风暴相关通路中的多种蛋白质。这些药物可能是治疗患者的有用药物,因为这些疗法可以在多个抑制点对抗病毒引起的细胞因子风暴,从而产生协同有效的治疗。
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引用次数: 4
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Medicine in Drug Discovery
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