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Deep tech innovation for parasite diagnosis: New dimensions and opportunities. 寄生虫诊断的深度技术创新:新的维度和机遇。
Q3 Medicine Pub Date : 2023-01-01 Epub Date: 2023-05-19 DOI: 10.4103/tp.tp_12_23
Subhash Chandra Parija, Abhijit Poddar

By converging advanced science, engineering, and design, deep techs are bringing a great wave of future innovations by mastering challenges and problem complexity across sectors and the field of parasitology is no exception. Remarkable research and advancements can be seen in the field of parasite detection and diagnosis through smartphone applications. Supervised and unsupervised data deep learnings are heavily exploited for the development of automated neural network models for the prediction of parasites, eggs, etc., From microscopic smears and/or sample images with more than 99% accuracy. It is expected that several models will emerge in the future wherein greater attention is being paid to improving the model's accuracy. Invariably, it will increase the chances of adoption across the commercial sectors dealing in health and related applications. However, parasitic life cycle complexity, host range, morphological forms, etc., need to be considered further while developing such models to make the deep tech innovations perfect for bedside and field applications. In this review, the recent development of deep tech innovations focusing on human parasites has been discussed focusing on the present and future dimensions, opportunities, and applications.

通过融合先进的科学、工程和设计,深度技术通过掌握跨部门的挑战和问题复杂性,带来了未来的创新浪潮,寄生虫学领域也不例外。通过智能手机应用程序在寄生虫检测和诊断领域可以看到显著的研究和进步。有监督和无监督的数据深度学习被大量用于开发自动神经网络模型,用于预测寄生虫、卵子等。从显微镜涂片和/或样本图像中,准确率超过99%。预计未来将出现几个模型,其中将更加关注提高模型的准确性。它将不断增加在卫生和相关应用的商业部门被采用的机会。然而,在开发此类模型时,需要进一步考虑寄生生命周期的复杂性、宿主范围、形态等,以使深度技术创新非常适合床边和现场应用。在这篇综述中,重点讨论了以人类寄生虫为重点的深度技术创新的最新发展,重点是当前和未来的维度、机会和应用。
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引用次数: 0
Paleoparasitology and human evolution. 古寄生虫学与人类进化。
Q3 Medicine Pub Date : 2023-01-01 Epub Date: 2023-05-19 DOI: 10.4103/tp.tp_23_23
Subhash Chandra Parija
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引用次数: 0
In silico study to predict promiscuous peptides for immunodiagnosis of cystic echinococcosis. 预测混杂肽用于囊性棘球蚴病免疫诊断的计算机研究。
Q3 Medicine Pub Date : 2023-01-01 Epub Date: 2023-05-19 DOI: 10.4103/tp.tp_70_22
Varun Chauhan, Azhar Khan, Umar Farooq

Background: Cystic echinococcosis (CE), caused by Echinococcus granulosus, is a major zoonotic disease that causes significant human morbidity and mortality. This cosmopolitan disease is difficult to diagnose, treat, and control. So far, crude extracts of hydatid cyst fluid containing antigen B or antigen 5 have been used as the primary antigenic source for its immunodiagnosis. The main issue is that it reacts with sera from people infected with other helminths. There is currently no standard, specific, or sensitive test for disease diagnosis, and no human vaccine has been reported.

Aims and objectives: Considering the need for efficient immunization and/or immunodiagnosis, six E. granulosus antigens, antigen 5, antigen B, heat shock proteins such as Hsp-8 and Hsp-90, phosphoenolpyruvate carboxykinase, and tetraspanin-1, were chosen.

Materials and methods: Using various in silico tools, T cell and B cell epitopes (promiscuous peptides) were predicted by targeting antigen 5, antigen B, heat shock proteins such as Hsp-8 and Hsp-90, phosphoenolpyruvate carboxykinase, and tetraspanin-1.

Results: There are twelve promiscuous peptides with overlapping human leukocyte antigen (HLA) class-I, class-II, and conformational B cell epitopes. Such immunodominant peptides could be useful as subunit vaccines. Furthermore, six peptides specific for E. granulosus were also discovered, which may prove to be important markers in the diagnosis of CE, potentially preventing misdiagnosis and mismanagement.

Conclusion: These epitopes may be the most important vaccine targets in E. granulosus because they have the most promiscuous peptides and B cell epitopes, as well as the highest affinity for different alleles, as determined by docking scores. However, additional research using in vitro and in vivo models is undertaken.

背景:由细粒棘球蚴引起的囊性棘球蚴病(CE)是一种主要的人畜共患疾病,可导致显著的人类发病率和死亡率。这种世界性疾病很难诊断、治疗和控制。迄今为止,含有抗原B或抗原5的棘球蚴囊液粗提物已被用作其免疫诊断的主要抗原来源。主要问题是它会与感染其他蠕虫的人的血清发生反应。目前还没有标准的、特异的或敏感的疾病诊断测试,也没有人类疫苗的报道。目的:考虑到高效免疫和/或免疫诊断的需要,选择了6种颗粒大肠杆菌抗原,抗原5、抗原B、热休克蛋白如Hsp-8和Hsp-90、磷酸烯醇丙酮酸羧激酶和四spanin-1。材料和方法:使用各种计算机工具,通过靶向抗原5、抗原B、热休克蛋白如Hsp-8和Hsp-90、磷酸烯醇丙酮酸羧激酶和四氢叶酸1来预测T细胞和B细胞表位(混杂肽),和构象B细胞表位。这种免疫优势肽可以用作亚单位疫苗。此外,还发现了六种颗粒大肠杆菌特异性肽,这些肽可能被证明是诊断CE的重要标志物,有可能防止误诊和管理不善。结论:这些表位可能是颗粒大肠杆菌最重要的疫苗靶点,因为它们具有最混杂的肽和B细胞表位,并且对不同等位基因的亲和力最高,这是通过对接得分确定的。然而,使用体外和体内模型进行了额外的研究。
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引用次数: 0
Concomitant multiple subretinal cysticerci in neurocysticercosis 神经囊虫病并发多发性视网膜下囊虫
Q3 Medicine Pub Date : 2023-01-01 DOI: 10.4103/2229-5070.368525
Simran Chhabra, S. Narang, Anusuya Bhattacharyya, Ravinder Kaur
We present a unique case of asymptomatic NCC that was accidently diagnosed on radiological investigations after a road traffic accident. An Ophthalmologic consult was sought to rule out intraocular or optic nerve cysticercosis. Fundoscopy showed multiple white-pale yellow lesions in the right eye which on ultrasonography confirmed cyst lined by a cyst wall consistent with subretinal cysticercosis. The patient was treated with diode laser photocoagulation. A high index of suspicion is required to diagnose NCCin endemic areas. In the right eye which on ultrasonography confirmed cyst lined by a cyst wall consistent with subretinal cysticercosis. The patient was treated with diode laser photocoagulation.
我们提出一个独特的病例无症状的NCC,是意外诊断的放射调查后,道路交通事故。寻求眼科会诊以排除眼内或视神经囊虫病。眼底镜检查显示右眼多发白色淡黄色病变,超声检查证实为视网膜下囊虫病。采用二极管激光光凝治疗。诊断NCCin流行地区需要高度的怀疑指数。右眼超声检查证实囊肿内嵌有囊壁,符合视网膜下囊虫病。采用二极管激光光凝治疗。
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引用次数: 0
Cysticercosis and co-incidence with COVID-19. 囊尾蚴病与新冠肺炎合并发病。
Q3 Medicine Pub Date : 2022-07-01 Epub Date: 2022-11-24 DOI: 10.4103/tp.tp_86_21
Rujittika Mungmunpuntipantip, Viroj Wiwanitkit
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引用次数: 1
Obituary: Dr. Ramesh Chander Mahajan 讣告:Ramesh Chander Mahajan博士
Q3 Medicine Pub Date : 2022-07-01 DOI: 10.4103/tp.tp_10_22
S. Khurana
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引用次数: 1
Detection of a Lophomonas, a rare pathogen in Bronchoalveolar lavage. 支气管肺泡灌洗中一种罕见病原体Lophomonas的检测。
Q3 Medicine Pub Date : 2022-07-01 Epub Date: 2022-11-24 DOI: 10.4103/tp.tp_97_21
Archana Keche, Shagufta Khatoon, Dibakar Sahu
Lophomonas infection is an emerging parasitic disease-causing respiratory infection. Although common in immunocompromised patient, it has been observed also in some immunocompetent cases. We report the case of a 45-year-old male who presented with productive cough, fever, and chest pain, with marked eosinophilia and cavitary lesion in the X-ray chest. KOH preparation and acid-fast bacilli microscopy of bronchoalveolar lavage (BAL) were negative. Direct microscopic examination of BAL accidentally showed a large number of living Lophomonas species with the movement of flagella. Methylene blue and Giemsa staining showed the plume of flagella and the nucleus. The patient was managed conservatively with metronidazole and get cured. It was concluded that the patient presented with signs and symptoms of pneumonia must be evaluated for rare events also if the patient was not responding with typical management of pneumonia. We reported the first case of this rare entity in Chhattisgarh state in an immunocompetent young Indian male.
Lophomonas感染是一种新出现的引起呼吸道感染的寄生虫病。尽管在免疫功能受损的患者中很常见,但在一些免疫功能正常的病例中也观察到了这种情况。我们报告了一例45岁男性,其表现为生产性咳嗽、发烧和胸痛,X光胸部有明显的嗜酸性粒细胞增多和空洞性病变。KOH制剂及支气管肺泡灌洗液抗酸杆菌镜检均为阴性。对BAL的直接显微镜检查意外地显示大量活的Lophomonas物种具有鞭毛的运动。亚甲蓝和Giemsa染色显示鞭毛羽和细胞核。病人用甲硝唑保守治疗并治愈。结论是,如果患者对典型的肺炎治疗没有反应,则必须对出现肺炎体征和症状的患者进行罕见事件评估。我们报道了恰蒂斯加尔邦第一例这种罕见疾病,发生在一名具有免疫活性的印度年轻男性身上。
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引用次数: 1
Acanthamoeba keratitis: Experience from a tertiary eye care center in North India. 棘阿米巴角膜炎:北印度一家三级眼科护理中心的经验。
Q3 Medicine Pub Date : 2022-07-01 Epub Date: 2022-11-24 DOI: 10.4103/tp.tp_16_22
Nishat Hussain Ahmed, Prachala G Rathod, Gita Satpathy, Radhika Tandon, Namrata Sharma, Jeewan S Titiyal

The free-living amebae of genus Acanthamoeba are an important cause of microbial keratitis. The clinical appearance of Acanthamoeba keratitis (AK) usually mimics viral or fungal keratitis. Thus, microbiological workup plays a significant role in the diagnosis and timely treatment of such cases. We report a retrospective case series of seven culture-confirmed AK cases from a tertiary eye care center in North India. Various risk factors and triggers of infection, clinical presentations, microbiological findings, and management of AK are elucidated.

棘阿米巴属的自由生活阿米巴是引起微生物性角膜炎的重要原因。棘阿米巴角膜炎(AK)的临床表现通常与病毒性或真菌性角膜炎相似。因此,微生物检查在此类病例的诊断和及时治疗中发挥着重要作用。我们报告了来自北印度一家三级眼科护理中心的7例文化确诊AK病例的回顾性病例系列。阐明了感染的各种危险因素和诱因、临床表现、微生物学发现和AK的管理。
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引用次数: 1
Clinical and laboratory profile of patients with amoebic liver abscess. 阿米巴肝脓肿患者的临床和实验室资料。
Q3 Medicine Pub Date : 2022-07-01 Epub Date: 2022-11-24 DOI: 10.4103/tp.TP_38_20
Yashik Bansal, Vinod Maurya, Vibhor Tak, Gopal Krishna Bohra, Deepak Kumar, Akhil Dhanesh Goel, Taruna Yadav, Vijaya Lakshmi Nag

Context: Amebic liver abscess (ALA) occurs in 3%-9% of the amebiasis cases, with complications seen in 20%-40% of the cases and 2%-18% mortality rate. Successful treatment thus requires the accurate identification of these cases.

Aims and objectives: We aimed to assess the seropositivity and profile of ALA patients in western Rajasthan.

Materials and methods: This retrospective study was conducted at a tertiary care center in western Rajasthan from November 2017 to May 2019. Serological diagnosis of ALA was done by detecting immunoglobulin G (IgG) antibodies in the serum of the patients by ELISA. The derangements in laboratory profile (hematological and biochemical parameters) and ultrasonography findings were assessed from the hospital records. Statistical analysis was performed using Mann-Whitney U-test.

Results: Among the total cases (n = 34), 20 were diagnosed as ALA. Twenty-one (61.8%) were positive for anti-amebic IgG antibodies. Among ALA patients, 14 (70%) were >40 years old and only 6 (30%) patients were of age ≤40 years. Male: female ratio was 5.7:1, and ultrasonography records of 15 ALA patients revealed the presence of hepatomegaly (n = 7, 46.7%), pleural effusion (n = 3, 20%), lung collapse (n = 2, 13.3%), and vascular involvement (n = 1, 6.7%). The right lobe of the liver was involved in majority of the patients (n = 12, 80%). Total white blood cell count (P < 0.001), absolute neutrophil count (P = 0.001), total serum bilirubin (P = 0.019), and serum alkaline phosphatase (P = 0.018) were significantly elevated in ALA patients.

Conclusions: Seroprevalence shows that ALA still remains the dominant etiology in liver abscess patients in this region. There are significant derangements in the laboratory profile that require a larger study for corroboration.

背景:阿米巴肝脓肿(ALA)发生在3%-9%的阿米巴病病例中,并发症发生在20%-40%的病例中,死亡率为2%-18%。因此,成功的治疗需要准确识别这些病例。目的和目的:我们旨在评估拉贾斯坦邦西部ALA患者的血清阳性率和概况。材料和方法:这项回顾性研究于2017年11月至2019年5月在拉贾斯坦邦西部的一家三级护理中心进行。ALA的血清学诊断是通过ELISA检测患者血清中的免疫球蛋白G(IgG)抗体来完成的。根据医院记录评估实验室特征(血液学和生化参数)和超声检查结果的紊乱。使用Mann-Whitney U型检验进行统计分析。结果:34例患者中,20例诊断为ALA,21例(61.8%)抗阿米巴IgG抗体阳性。在ALA患者中,14名(70%)患者年龄>40岁,只有6名(30%)患者年龄≤40岁。男女比例为5.7:1,15名ALA患者的超声记录显示存在肝肿大(n=7,46.7%)、胸腔积液(n=3,20%)、肺塌陷(n=2,13.3%)和血管受累(n=1,6.7%)。大多数患者的肝脏右叶受累(n=12,80%)。ALA患者的总白细胞计数(P<0.001)、中性粒细胞绝对计数(P=0.001)、血清总胆红素(P=0.019)和血清碱性磷酸酶(P=0.018)显著升高。结论:血清流行率表明ALA仍然是该地区肝脓肿患者的主要病因。实验室概况中存在显著的混乱,需要进行更大规模的研究来证实。
{"title":"Clinical and laboratory profile of patients with amoebic liver abscess.","authors":"Yashik Bansal,&nbsp;Vinod Maurya,&nbsp;Vibhor Tak,&nbsp;Gopal Krishna Bohra,&nbsp;Deepak Kumar,&nbsp;Akhil Dhanesh Goel,&nbsp;Taruna Yadav,&nbsp;Vijaya Lakshmi Nag","doi":"10.4103/tp.TP_38_20","DOIUrl":"10.4103/tp.TP_38_20","url":null,"abstract":"<p><strong>Context: </strong>Amebic liver abscess (ALA) occurs in 3%-9% of the amebiasis cases, with complications seen in 20%-40% of the cases and 2%-18% mortality rate. Successful treatment thus requires the accurate identification of these cases.</p><p><strong>Aims and objectives: </strong>We aimed to assess the seropositivity and profile of ALA patients in western Rajasthan.</p><p><strong>Materials and methods: </strong>This retrospective study was conducted at a tertiary care center in western Rajasthan from November 2017 to May 2019. Serological diagnosis of ALA was done by detecting immunoglobulin G (IgG) antibodies in the serum of the patients by ELISA. The derangements in laboratory profile (hematological and biochemical parameters) and ultrasonography findings were assessed from the hospital records. Statistical analysis was performed using Mann-Whitney U-test.</p><p><strong>Results: </strong>Among the total cases (<i>n</i> = 34), 20 were diagnosed as ALA. Twenty-one (61.8%) were positive for anti-amebic IgG antibodies. Among ALA patients, 14 (70%) were >40 years old and only 6 (30%) patients were of age ≤40 years. Male: female ratio was 5.7:1, and ultrasonography records of 15 ALA patients revealed the presence of hepatomegaly (<i>n</i> = 7, 46.7%), pleural effusion (<i>n</i> = 3, 20%), lung collapse (<i>n</i> = 2, 13.3%), and vascular involvement (<i>n</i> = 1, 6.7%). The right lobe of the liver was involved in majority of the patients (<i>n</i> = 12, 80%). Total white blood cell count (<i>P</i> < 0.001), absolute neutrophil count (<i>P</i> = 0.001), total serum bilirubin (<i>P</i> = 0.019), and serum alkaline phosphatase (<i>P</i> = 0.018) were significantly elevated in ALA patients.</p><p><strong>Conclusions: </strong>Seroprevalence shows that ALA still remains the dominant etiology in liver abscess patients in this region. There are significant derangements in the laboratory profile that require a larger study for corroboration.</p>","PeriodicalId":37825,"journal":{"name":"Tropical Parasitology","volume":"12 2","pages":"113-118"},"PeriodicalIF":0.0,"publicationDate":"2022-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9832495/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9099820","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Gut Parasites of medical importance harboured by Musca domestica in Calabar, Nigeria. 尼日利亚卡拉巴尔的家蝇携带的具有重要医学意义的肠道寄生虫。
Q3 Medicine Pub Date : 2022-07-01 Epub Date: 2022-11-24 DOI: 10.4103/tp.tp_51_21
Iquo Bassey Otu-Bassey, Glory Kingsley Efretuei, Maurice Mbah

Introduction: Housefly (Musca domestica), because of its body structure, filthy and feeding habits, is reported to be capable of carrying a variety of microbes, including potential pathogens, over its body appendages.

Aims: This study aimed to investigate M. domestica in Calabar for pathogenic gut parasites, determine its role in parasitic diseases transmission, make appropriate recommendations toward its management and effective control of the associated parasitic diseases, and hence promote the society health status.

Settings and design: This was a cross-sectional study.

Materials and methods: A total of 300 M. domestica specimens (150 each from sanitary and insanitary areas, pooled in batches of five flies per pool) were used for the study. The parasites were detected from the spun deposits of fly body surface wash and gut contents using direct microscopy and formol-ether technique.

Statistical analysis used: Data were analyzed using Statistical Package for the Social Sciences (SPSS), version 21.0, and Chi-square test at a significant level of P < 0.05.

Results: Overall frequency of parasites detection was 46.7%, with helminths and protozoa showing similar frequency, 23.3% each. External body surface of flies recorded a statistically significant higher parasites frequency 76.7% than their gut contents 16.7% (P = 0.000). A statistically significant higher parasite detection rate was observed in the insanitary (63.3%) than in sanitary areas (30.0%) (P = 0.0114). The parasites detected in this study were Entamoeba histolytica/dispar 39.9%, hookworm (21.4%), Ascaris lumbricoides (17.9%), Trichuris trichiura (14.3%), and Giardia intestinalis (7.2%).

Conclusion: This study has confirmed M. domestica in Calabar as a mechanical carrier of potential pathogenic gut parasites, especially in the insanitary areas, with E. histolytica/dispar being the most frequently encountered. Effective control of flies' population in the human and animal habitats and increased public awareness on their health hazards are recommended.

引言:家蝇(Musca domestica)由于其身体结构、肮脏和进食习惯,据报道能够在其身体附属物上携带多种微生物,包括潜在的病原体。目的:本研究旨在调查卡拉巴尔的家蝇对肠道寄生虫的致病性,确定其在寄生虫病传播中的作用,为其管理和有效控制相关寄生虫病提出适当的建议,从而提高社会健康水平。设置和设计:这是一项横断面研究。材料和方法:共使用300个家蝇标本(每个150个来自卫生和不卫生区域,每池5只)进行研究。使用直接显微镜和甲醛醚技术从苍蝇体表洗涤液和肠道内容物的旋转沉积物中检测到寄生虫。使用的统计分析:使用社会科学统计软件包(SPSS)21.0版和卡方检验对数据进行分析,结果:寄生虫检测的总体频率为46.7%,蠕虫和原生动物的频率相似,各为23.3%。苍蝇的体表寄生虫发生率为76.7%,高于其肠道内容物的16.7%(P=0.000)。在不卫生地区(63.3%)的寄生虫检出率高于卫生地区(30.0%)(P=0.0114),具有统计学意义,蛔虫(17.9%)、鞭虫(14.3%)和肠贾第鞭毛虫(7.2%)。建议有效控制人类和动物栖息地的苍蝇数量,提高公众对其健康危害的认识。
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引用次数: 1
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Tropical Parasitology
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