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Biomedical applications of tyrosinases and tyrosinase inhibitors. 酪氨酸酶和酪氨酸酶抑制剂的生物医学应用。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-09-07 DOI: 10.1016/bs.enz.2024.05.005
Luigi Pisano, Martina Turco, Claudiu T Supuran

Tyrosinase is involved in several human diseases, among which hypopigmentation and depigmentation conditions (vitiligo, idiopathic guttate hypomelanosis, pityriasis versicolor, pityriasis alba) and hyperpigmentations (melasma, lentigines, post-inflammatory and periorbital hyperpigmentation, cervical idiopathic poikiloderma and acanthosis nigricans). There are increasing evidences that tyrosinase plays a relevant role in the formation and progression of melanoma, a difficult to treat skin tumor. Hydroquinone, azelaic acid and tretinoin (all-trans-retinoic acid) are clinically used in the management of some hyperpigmentations, whereas many novel chemotypes acting as tyrosinase inhibitors with potential antimelanoma action are being investigated. Kojic acid, hydroquinone, its glycosylated derivative arbutin, or the resorcinol derivative rucinol are used in cosmesis in creams as skin whitening agents, whereas no antimelanoma tyrosinase inhibitor reached clinical trials so far, although thiamidol is a recently approved new tyrosinase inhibitor for the treatment of melasma. Kojic acid and vitamin C are used for avoiding vegetable/food oxidative browning due to the tyrosinase-catalyzed reactions, whereas bacterial enzymes show potential in biotechnological applications, for the production of mixed melanins, for protein cross-linking reactions, for producing phenol(s) biosensors, of for the production of L-DOPA, an anti-Parkinson's disease drug.

酪氨酸酶与多种人类疾病有关,其中包括色素减退和色素沉着病(白癜风、特发性凹陷性色素减退症、花斑癣、白癣)和色素沉着病(黄褐斑、雀斑、炎症后和眶周色素沉着、特发性颈椎病和黑棘皮病)。越来越多的证据表明,酪氨酸酶在黑色素瘤这种难以治疗的皮肤肿瘤的形成和发展过程中起着重要作用。对苯二酚、壬二酸和维甲酸(全反式维甲酸)被临床用于治疗某些色素沉着,而许多新型化学物质作为酪氨酸酶抑制剂,具有潜在的抗黑色素瘤作用,目前正在研究之中。曲酸、对苯二酚、其糖基化衍生物熊果苷或间苯二酚衍生物芦丁醇作为皮肤美白剂被用于化妆品的面霜中,而迄今为止还没有抗黑色素瘤的酪氨酸酶抑制剂进入临床试验阶段,尽管噻吗洛尔是最近批准用于治疗黄褐斑的一种新的酪氨酸酶抑制剂。曲酸和维生素 C 被用于避免蔬菜/食品因酪氨酸酶催化反应而氧化变褐,而细菌酶则在生物技术应用方面显示出潜力,可用于生产混合黑色素、蛋白质交联反应、生产苯酚生物传感器,以及生产抗帕金森病药物 L-DOPA。
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引用次数: 0
Peptide and peptidomimetic tyrosinase inhibitors. 多肽和拟肽酪氨酸酶抑制剂。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-09-10 DOI: 10.1016/bs.enz.2024.06.005
Fosca Errante, Lucrezia Sforzi, Claudiu T Supuran, Anna Maria Papini, Paolo Rovero

Melanin, which is produced by melanocytes and spread over keratinocytes, is responsible for human skin browning. There are several processes involved in melanogenesis, mostly prompted by enzymatic activities. Tyrosinase (TYR), a copper containing metalloenzyme, is considered the main actor in melanin production, as it catalyzes two crucial steps that modify tyrosine residues in dopaquinone. For this reason, TYR inhibition has been exploited as a possible mechanism of modulation of hyper melanogenesis. There are various types of molecules used to block TYR activity, principally used as skin whitening agents in cosmetic products, e.g., tretinoin, hydroquinone, azelaic acid, kojic acid, arbutin and peptides. Peptides are highly valued for their versatile nature, making them promising candidates for various functions. Their specificity often leads to excellent safety, tolerability, and efficacy in humans, which can be considered their primary advantage over traditional small molecules. There are several examples of tyrosinase inhibitor peptides (TIPs) operating as possible hypo-pigmenting agents, which can be classified according to their origin: natural, hybrid or synthetically produced. Moreover, the possibility of variating their backbones, introducing non-canonical amino acids or modifying one or more peptide bond(s), to obtain peptidomimetic molecules, is an added value to avoid or delay proteolytic activity, while the possibility of conjugation with other bioactive peptides or organic moieties can bring other specific activity leading to dual-functional peptides.

黑色素由黑色素细胞产生,并分布在角质细胞上,是造成人体皮肤褐变的原因。黑色素的生成有几个过程,主要是由酶促活动引起的。酪氨酸酶(TYR)是一种含铜的金属酶,被认为是黑色素生成的主要角色,因为它催化了两个关键步骤,对多巴醌中的酪氨酸残基进行修饰。因此,抑制 TYR 被认为是调节黑色素生成亢进的一种可能机制。用于阻断 TYR 活性的分子种类繁多,主要用作化妆品中的美白剂,如曲替诺、氢醌、杜鹃花酸、曲酸、熊果苷和肽。肽因其多用途的性质而备受推崇,使其有望发挥各种功能。肽的特异性往往使其对人体具有极佳的安全性、耐受性和有效性,这可以说是肽相对于传统小分子药物的主要优势。酪氨酸酶抑制剂肽(TIPs)可作为色素减退剂使用,根据其来源可分为天然、杂交或人工合成几类。此外,通过改变肽的骨架、引入非典型氨基酸或修改一个或多个肽键来获得拟肽分子的可能性,是避免或延缓蛋白水解活性的附加值,而与其他生物活性肽或有机分子共轭的可能性则可带来其他特殊活性,从而产生双功能肽。
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引用次数: 0
History of The Enzymes: 1950-2023. 酶的历史:1950-2023。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 Epub Date: 2023-09-27 DOI: 10.1016/bs.enz.2023.09.001
Fuyuhiko Tamanoi

Since its publication in 1950, the series "The Enzymes" has been established as an important reference book for researchers and students in the field of enzymology, biochemistry and biophysics and medical research. A number of scientists have served as a series editor for the Enzymes. Topics covered range from characterizations of various enzymes, biochemical processes and medical applications. This chapter provides an overview of the history of The Enzymes.

自1950年出版以来,《酶》系列已成为酶学、生物化学、生物物理学和医学研究领域研究人员和学生的重要参考书。许多科学家曾担任《酶》的系列编辑。涵盖的主题包括各种酶的特性、生物化学过程和医学应用。本章概述了酶的历史。
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引用次数: 0
The NPAC-LSD2 complex in nucleosome demethylation. 核小体脱甲基过程中的NPAC-LSD2复合物。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 Epub Date: 2023-04-21 DOI: 10.1016/bs.enz.2023.03.003
Jonatan Caroli, Andrea Mattevi

NPAC is a transcriptional co-activator widely associated with the H3K36me3 epigenetic marks present in the gene bodies. NPAC plays a fundamental role in RNA polymerase progression, and its depletion downregulates gene transcription. In this chapter, we review the current knowledge on the functional and structural features of this multi-domain protein. NPAC (also named GLYR1 or NP60) contains a PWWP motif, a chromatin binder and epigenetic reader that is proposed to weaken the DNA-histone contacts facilitating polymerase passage through the nucleosomes. The C-terminus of NPAC is a catalytically inactive dehydrogenase domain that forms a stable and rigid tetramer acting as an oligomerization module for the formation of co-transcriptional multimeric complexes. The PWWP and dehydrogenase domains are connected by a long, mostly disordered, linker that comprises putative sites for protein and DNA interactions. A short dodecapeptide sequence (residues 214-225) forms the binding site for LSD2, a flavin-dependent lysine-specific histone demethylase. This stretch of residues binds on the surface of LSD2 and facilitates the capture and processing of the H3 tail in the nucleosome context, thus promoting the H3K4me1/2 epigenetic mark removal. LSD2 is associated with other two chromatin modifiers, G9a and NSD3. The LSD2-G9a-NSD3 complex modifies the pattern of the post translational modifications deposited on histones, thus converting the relaxed chromatin into a transcriptionally refractory state after the RNA polymerase passage. NPAC is a scaffolding factor that organizes and coordinates the epigenetic activities required for optimal transcription elongation.

NPAC是一种与基因体中存在的H3K36me3表观遗传学标记广泛相关的转录共激活剂。NPAC在RNA聚合酶的进展中起着重要作用,其缺失下调了基因转录。在本章中,我们回顾了目前关于这种多结构域蛋白质的功能和结构特征的知识。NPAC(也称为GLYR1或NP60)含有PWWP基序、染色质结合物和表观遗传学读取器,被认为可以削弱DNA组蛋白接触,促进聚合酶通过核小体。NPAC的C末端是一个催化失活的脱氢酶结构域,其形成稳定和刚性的四聚体,作为形成共转录多聚体复合物的低聚模块。PWWP和脱氢酶结构域由一个长的、大多是无序的连接体连接,该连接体包括蛋白质和DNA相互作用的假定位点。短十二肽序列(残基214-225)形成LSD2的结合位点,LSD2是一种黄素依赖性赖氨酸特异性组蛋白去甲基化酶。这段残基结合在LSD2的表面,并促进核小体中H3尾部的捕获和处理,从而促进H3K4me1/2表观遗传标记的去除。LSD2与另外两种染色质修饰因子G9a和NSD3相关。LSD2-G9a-NSD3复合物改变了组蛋白上沉积的翻译后修饰的模式,从而在RNA聚合酶通过后将松弛的染色质转化为转录难治状态。NPAC是一种支架因子,它组织和协调最佳转录延伸所需的表观遗传学活动。
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引用次数: 0
A century of mitochondrial research, 1922-2022. 线粒体研究的一个世纪,1922-2022。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 Epub Date: 2023-07-31 DOI: 10.1016/bs.enz.2023.07.002
Howard T Jacobs

Although recognized earlier as subcellular entities by microscopists, mitochondria have been the subject of functional studies since 1922, when their biochemical similarities with bacteria were first noted. In this overview I trace the history of research on mitochondria from that time up to the present day, focussing on the major milestones of the overlapping eras of mitochondrial biochemistry, genetics, pathology and cell biology, and its explosion into new areas in the past 25 years. Nowadays, mitochondria are considered to be fully integrated into cell physiology, rather than serving specific functions in isolation.

尽管线粒体早期被显微镜学家认为是亚细胞实体,但自1922年首次发现其与细菌的生化相似性以来,线粒体一直是功能研究的主题。在这篇综述中,我追溯了从那时到今天线粒体研究的历史,重点关注线粒体生物化学、遗传学、病理学和细胞生物学重叠时代的主要里程碑,以及在过去25年中向新领域的发展。如今,线粒体被认为是完全融入细胞生理的,而不是孤立地发挥特定功能。
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引用次数: 0
Mitogen-activated protein kinase (MAPK) cascades-A yeast perspective. 丝裂原活化蛋白激酶(MAPK)级联——酵母视角。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 Epub Date: 2023-07-28 DOI: 10.1016/bs.enz.2023.07.001
Lee Bardwell, Jeremy Thorner

Discovery of the class of protein kinase now dubbed a mitogen (or messenger)-activated protein kinase (MAPK) is an illustrative example of how disparate lines of investigation can converge and reveal an enzyme family universally conserved among eukaryotes, from single-celled microbes to humans. Moreover, elucidation of the circuitry controlling MAPK function defined a now overarching principle in enzyme regulation-the concept of an activation cascade mediated by sequential phosphorylation events. Particularly ground-breaking for this field of exploration were the contributions of genetic approaches conducted using several model organisms, but especially the budding yeast Saccharomyces cerevisiae. Notably, examination of how haploid yeast cells respond to their secreted peptide mating pheromones was crucial in pinpointing genes encoding MAPKs and their upstream activators. Fully contemporaneous biochemical analysis of the activities elicited upon stimulation of mammalian cells by insulin and other growth- and differentiation-inducing factors lead eventually to the demonstration that components homologous to those in yeast were involved. Continued studies of these pathways in yeast were integral to other foundational discoveries in MAPK signaling, including the roles of tethering, scaffolding and docking interactions.

现在被称为有丝分裂原(或信使)激活蛋白激酶(MAPK)的一类蛋白激酶的发现是一个例证,说明了不同的研究路线如何融合,并揭示了从单细胞微生物到人类等真核生物中普遍保守的酶家族。此外,对控制MAPK功能的电路的阐明定义了酶调节中目前最重要的原理——由顺序磷酸化事件介导的激活级联的概念。这一探索领域尤其具有突破性的是使用几种模式生物进行的遗传方法的贡献,尤其是萌芽酵母酿酒酵母。值得注意的是,检查单倍体酵母细胞如何对其分泌的肽交配信息素作出反应,对于精确定位编码MAPK及其上游激活剂的基因至关重要。对胰岛素和其他生长和分化诱导因子刺激哺乳动物细胞时引发的活性进行完全同期的生化分析,最终证明与酵母中的成分同源。对酵母中这些途径的持续研究是MAPK信号传导的其他基础发现的组成部分,包括系留、支架和对接相互作用的作用。
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引用次数: 0
The Hsp70 and JDP proteins: Structure-function perspective on molecular chaperone activity. Hsp70和JDP蛋白:分子伴侣活性的结构-功能视角。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 Epub Date: 2023-09-29 DOI: 10.1016/bs.enz.2023.07.008
Szymon J Ciesielski, Cameron Young, Elena J Ciesielska, Grzegorz L Ciesielski

Proteins are the most structurally diverse cellular biomolecules that act as molecular machines driving essential activities of all living organisms. To be functional, most of the proteins need to fold into a specific three-dimensional structure, which on one hand should be stable enough to oppose disruptive conditions and on the other hand flexible enough to allow conformational dynamics necessary for their biological functions. This compromise between stability and dynamics makes proteins susceptible to stress-induced misfolding and aggregation. Moreover, the folding process itself is intrinsically prone to conformational errors. Molecular chaperones are proteins that mitigate folding defects and maintain the structural integrity of the cellular proteome. Promiscuous Hsp70 chaperones are central to these processes and their activity depends on the interaction with obligatory J-domain protein (JDP) partners. In this review, we discuss structural aspects of Hsp70s, JDPs, and their interaction in the context of biological activities.

蛋白质是结构最为多样的细胞生物分子,是驱动所有生物体基本活动的分子机器。为了发挥功能,大多数蛋白质需要折叠成一个特定的三维结构,一方面,该结构应该足够稳定,以对抗破坏性条件,另一方面,它应该足够灵活,以允许其生物功能所需的构象动力学。这种稳定性和动力学之间的折衷使得蛋白质容易受到应激诱导的错误折叠和聚集的影响。此外,折叠过程本身本质上容易出现构象错误。分子伴侣是减轻折叠缺陷并保持细胞蛋白质组结构完整性的蛋白质。混杂的Hsp70伴侣是这些过程的核心,它们的活性取决于与强制性J结构域蛋白(JDP)伴侣的相互作用。在这篇综述中,我们讨论了Hsp70s、JDPs的结构方面,以及它们在生物活性背景下的相互作用。
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引用次数: 0
Perspectives on ATP-dependent chromatin remodeling. ATP依赖性染色质重塑的展望。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 Epub Date: 2023-04-19 DOI: 10.1016/bs.enz.2023.03.002
James T Kadonaga

Nucleosomes are intrinsically immobile, and thus, ATP-dependent chromatin remodeling factors are needed to alter nucleosomes to facilitate DNA-directed processes such as transcription. More generally, chromatin remodeling factors mediate chromatin dynamics, which encompasses nucleosome assembly, movement, and disruption as well as histone exchange. Here, I present selected thoughts and perspectives on the past, present, and future of these fascinating ATP-driven motor proteins.

核小体本质上是不动的,因此,需要ATP依赖性染色质重塑因子来改变核小体,以促进DNA导向的过程,如转录。更普遍地说,染色质重塑因子介导染色质动力学,包括核小体组装、运动和破坏以及组蛋白交换。在这里,我对这些迷人的ATP驱动的运动蛋白的过去、现在和未来提出了一些想法和观点。
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引用次数: 0
Coordination of cross-talk between metabolism and epigenetic regulation by the SIN3 complex. SIN3复合物代谢和表观遗传学调控之间的串扰协调。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 Epub Date: 2023-07-28 DOI: 10.1016/bs.enz.2023.06.001
Imad Soukar, Anjalie Amarasinghe, Lori A Pile

Post-translational modifications of histone proteins control the expression of genes. Metabolites from central and one-carbon metabolism act as donor moieties to modify histones and regulate gene expression. Thus, histone modification and gene regulation are connected to the metabolite status of the cell. Histone modifiers, such as the SIN3 complex, regulate genes involved in proliferation and metabolism. The SIN3 complex contains a histone deacetylase and a histone demethylase, which regulate the chromatin landscape and gene expression. In this chapter, we review the cross-talk between metabolic pathways that produce donor moieties, and epigenetic complexes regulating proliferation and metabolic genes. This cross-talk between gene regulation and metabolism is tightly controlled, and disruption of this cross-talk leads to metabolic diseases. We discuss promising therapeutics that directly regulate histone modifiers, and can affect the metabolic status of the cell, alleviating some metabolic diseases.

组蛋白的翻译后修饰控制基因的表达。来自中央和单碳代谢的代谢产物作为供体部分来修饰组蛋白并调节基因表达。因此,组蛋白修饰和基因调控与细胞的代谢状态有关。组蛋白修饰物,如SIN3复合物,调节参与增殖和代谢的基因。SIN3复合物含有组蛋白脱乙酰酶和组蛋白脱甲基酶,它们调节染色质景观和基因表达。在本章中,我们回顾了产生供体部分的代谢途径与调节增殖和代谢基因的表观遗传复合物之间的串扰。基因调节和代谢之间的这种串扰受到严格控制,这种串扰的破坏会导致代谢性疾病。我们讨论了有前景的治疗方法,这些方法可以直接调节组蛋白修饰物,并可以影响细胞的代谢状态,缓解一些代谢性疾病。
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引用次数: 0
Five decades of metalloenzymology. 50年的金属酶学。
Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 Epub Date: 2023-03-30 DOI: 10.1016/bs.enz.2023.03.001
Robert P Hausinger

Metalloenzymes have been detailed in The Enzymes since its inception over half a century ago. Here, I review selected metal-containing enzyme highlights from early chapters in this series and I describe advances made since those contributions. Three topics are emphasized: nickel-containing enzymes, Fe(II)/2-oxoglutarate-dependent oxygenases, and enzymes containing non-canonical iron-sulfur clusters.

金属酶自半个多世纪前问世以来就在《酶》中有详细介绍。在这里,我回顾了本系列早期章节中精选的含金属酶亮点,并描述了自这些贡献以来取得的进展。重点介绍了三个主题:含镍酶、Fe(II)-2-氧戊二酸依赖性加氧酶和含非典型铁硫簇的酶。
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引用次数: 0
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