首页 > 最新文献

Latin American Data in Science最新文献

英文 中文
Database of oceanographic anomalies and atmospheric surface fluxes for the study of climate change in the Brazilian Northeast. 用于研究巴西东北部气候变化的海洋异常和大气表面通量数据库。
Pub Date : 2022-02-07 DOI: 10.53805/lads.v2i1.39
H. L. Varona, M. Araújo, M. Silva, M. Maida, B. Ferreira
This paper presents three datasets of anomalies of oceanic physical parameters and surface atmospheric fluxes in the northeast region of Brazil, geographically limited by 42.5°W - 29.75°W / 20.5°S - 1.25°N, calculated from the SODA, TROPFLUX and GPCP datasets. The DASAF-BNE (Daily Anomalies of the Surface Atmospheric Fluxes of the Brazilian Northeast), DRA-BNE (Daily Rainfall Anomalies in the Brazilian Northeast), and MAOP-BNE (Monthly Anomalies of Oceanographic Parameters in the Brazilian Northeast) datasets are generated with 0.25° resolution bilinearly interpolating the original datasets. This database includes four files in NetCDF format, which facilitates its handling due to the diversity of freeware tools that exist, DASAF-BNE and DRA-BNE have a daily frequency, while MAOP-BNE has a monthly frequency. This database is mainly intended to research climate changes in the Brazilian Northeast.
本文利用SODA、TROPFLUX和GPCP数据集计算了巴西东北部42.5°W ~ 29.75°W / 20.5°S ~ 1.25°N范围内的海洋物理参数异常和地表大气通量的3个数据集。采用0.25°分辨率双线性插值方法,生成了巴西东北部地表大气通量日距平(DASAF-BNE)、巴西东北部日降水距平(DRA-BNE)和巴西东北部海洋参数月距平(MAOP-BNE)数据集。该数据库包括四个NetCDF格式的文件,由于存在各种免费软件工具,这便于其处理,DASAF-BNE和DRA-BNE具有每日频率,而MAOP-BNE具有每月频率。该数据库主要用于研究巴西东北部的气候变化。
{"title":"Database of oceanographic anomalies and atmospheric surface fluxes for the study of climate change in the Brazilian Northeast.","authors":"H. L. Varona, M. Araújo, M. Silva, M. Maida, B. Ferreira","doi":"10.53805/lads.v2i1.39","DOIUrl":"https://doi.org/10.53805/lads.v2i1.39","url":null,"abstract":"This paper presents three datasets of anomalies of oceanic physical parameters and surface atmospheric fluxes in the northeast region of Brazil, geographically limited by 42.5°W - 29.75°W / 20.5°S - 1.25°N, calculated from the SODA, TROPFLUX and GPCP datasets. The DASAF-BNE (Daily Anomalies of the Surface Atmospheric Fluxes of the Brazilian Northeast), DRA-BNE (Daily Rainfall Anomalies in the Brazilian Northeast), and MAOP-BNE (Monthly Anomalies of Oceanographic Parameters in the Brazilian Northeast) datasets are generated with 0.25° resolution bilinearly interpolating the original datasets. This database includes four files in NetCDF format, which facilitates its handling due to the diversity of freeware tools that exist, DASAF-BNE and DRA-BNE have a daily frequency, while MAOP-BNE has a monthly frequency. This database is mainly intended to research climate changes in the Brazilian Northeast.","PeriodicalId":415033,"journal":{"name":"Latin American Data in Science","volume":"414 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2022-02-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"133417344","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Data on FTIR spectra of mixtures of sodium valproate (VPA) and histones H1 and H3 丙戊酸钠(VPA)与组蛋白H1和H3混合物的FTIR光谱数据
Pub Date : 2022-01-09 DOI: 10.53805/lads.v1i3.36
M. Mello, B. Vidal
Valproic acid/sodium valproate (VPA), a drug primarily used for treatment of seizure disorders, is recognized as an efficient epigenetic agent, inducing inhibition of histone deacetylases, promoting changes in the methylation status of DNA and histones, and affecting chromatin structure. In addition to these epigenetic effects, molecular affinity of VPA for histone H1 has been proposed based on thermal denaturation, fluorescence spectroscopy and circular dichroism assays. VPA interactions with DNA and histones using Fourier transform infrared (FTIR) microspectroscopy and high-performance polarization microscopy that are not related to the effects promoted on epigenetic markers have been recently explored. Data in this article provide supplementary information for a better understanding of the resulting FTIR spectra for mixtures of VPA and histones H1 and H3 and of the potential effect of VPA directly on histones that has been reported in the literature.
丙戊酸/丙戊酸钠(VPA)是一种主要用于治疗癫痫的药物,被认为是一种有效的表观遗传药物,可诱导组蛋白去乙酰化酶的抑制,促进DNA和组蛋白甲基化状态的改变,并影响染色质结构。除了这些表观遗传效应外,VPA对组蛋白H1的分子亲和性已经基于热变性、荧光光谱和圆二色性分析提出。最近利用傅里叶变换红外(FTIR)微光谱和高性能偏振显微镜研究了VPA与DNA和组蛋白的相互作用,这些相互作用与表观遗传标记的促进作用无关。本文的数据为更好地理解VPA与组蛋白H1和H3混合物的FTIR光谱以及文献中报道的VPA直接对组蛋白的潜在影响提供了补充信息。
{"title":"Data on FTIR spectra of mixtures of sodium valproate (VPA) and histones H1 and H3","authors":"M. Mello, B. Vidal","doi":"10.53805/lads.v1i3.36","DOIUrl":"https://doi.org/10.53805/lads.v1i3.36","url":null,"abstract":"Valproic acid/sodium valproate (VPA), a drug primarily used for treatment of seizure disorders, is recognized as an efficient epigenetic agent, inducing inhibition of histone deacetylases, promoting changes in the methylation status of DNA and histones, and affecting chromatin structure. In addition to these epigenetic effects, molecular affinity of VPA for histone H1 has been proposed based on thermal denaturation, fluorescence spectroscopy and circular dichroism assays. VPA interactions with DNA and histones using Fourier transform infrared (FTIR) microspectroscopy and high-performance polarization microscopy that are not related to the effects promoted on epigenetic markers have been recently explored. Data in this article provide supplementary information for a better understanding of the resulting FTIR spectra for mixtures of VPA and histones H1 and H3 and of the potential effect of VPA directly on histones that has been reported in the literature.","PeriodicalId":415033,"journal":{"name":"Latin American Data in Science","volume":"8 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2022-01-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126320927","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Database of rainfall erosivity factor for 141 locations in Brazil. 巴西141个地点的降雨侵蚀系数数据库。
Pub Date : 2021-12-20 DOI: 10.53805/lads.v1i3.37
R. Cecílio, J. P. Oliveira, D. B. D. S. Teixeira, F. F. Pruski, S. S. Zanetti
Soil erosion is a serious agricultural and environmental problem considered as a threat to sustainable development around the world. Rainfall is the primary cause of soil erosion, what leads the knowledge of its potential to cause soil erosion (rainfall erosivity – R-factor) to be a valuable tool for the design of land conservation best practices. As Brazil has a lack of information about rainfall erosivity, the present paper has determined the R-factor of 141 pluviographic stations distributed over Brazilian territory. Initially, erosive rainfalls were identified, and then the EI30 erosivity index was used to obtain the rainfall erosivity values. Regression models for the estimation of rainfall erosivity using daily rainfall data were established based on the correlation between the monthly average values of erosivity and the modified Fournier index. Results showed that the annual rainfall erosivity in the Brazilian stations analyzed ranged from 368.7 to 16,850.6 MJ mm ha-1 h-1 year-1. The results presented help to expand information about the spatial distribution of rainfall erosivity in Brazil, contributing to better conservation planning of land use.
土壤侵蚀是一个严重的农业和环境问题,被认为对世界各地的可持续发展构成威胁。降雨是土壤侵蚀的主要原因,因此,了解降雨对土壤侵蚀的潜在影响(降雨侵蚀力- r因子)是设计土地保护最佳做法的宝贵工具。由于巴西缺乏有关降雨侵蚀力的资料,本文确定了分布在巴西境内的141个雨位站的r因子。首先对侵蚀性降雨进行识别,然后利用EI30侵蚀力指数获得降雨侵蚀力值。基于侵蚀力月平均值与修正富尼尔指数的相关性,建立了利用日降水资料估算降雨侵蚀力的回归模型。结果表明,巴西站年降雨侵蚀力在368.7 ~ 16850.6 MJ mm ha-1 h-1年-1之间。研究结果有助于扩大巴西降雨侵蚀力的空间分布信息,有助于更好地进行土地利用保护规划。
{"title":"Database of rainfall erosivity factor for 141 locations in Brazil.","authors":"R. Cecílio, J. P. Oliveira, D. B. D. S. Teixeira, F. F. Pruski, S. S. Zanetti","doi":"10.53805/lads.v1i3.37","DOIUrl":"https://doi.org/10.53805/lads.v1i3.37","url":null,"abstract":"Soil erosion is a serious agricultural and environmental problem considered as a threat to sustainable development around the world. Rainfall is the primary cause of soil erosion, what leads the knowledge of its potential to cause soil erosion (rainfall erosivity – R-factor) to be a valuable tool for the design of land conservation best practices. As Brazil has a lack of information about rainfall erosivity, the present paper has determined the R-factor of 141 pluviographic stations distributed over Brazilian territory. Initially, erosive rainfalls were identified, and then the EI30 erosivity index was used to obtain the rainfall erosivity values. Regression models for the estimation of rainfall erosivity using daily rainfall data were established based on the correlation between the monthly average values of erosivity and the modified Fournier index. Results showed that the annual rainfall erosivity in the Brazilian stations analyzed ranged from 368.7 to 16,850.6 MJ mm ha-1 h-1 year-1. The results presented help to expand information about the spatial distribution of rainfall erosivity in Brazil, contributing to better conservation planning of land use.","PeriodicalId":415033,"journal":{"name":"Latin American Data in Science","volume":"15 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-12-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115235138","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Database of the historical series of fisheries production in the middle Madeira River region, southwest of the Amazon, from 2001 to 2013 2001年至2013年亚马逊西南部马德拉河中部地区渔业生产历史序列数据库
Pub Date : 2021-11-16 DOI: 10.53805/lads.v1i2.27
Keythiane Freire Ramos, L. S. Pelegrini, Jéssica Vieira Sardinha, R. Tartari, M. R. Anjos
The Amazon is very important regarding the continental extractive fishing as it has the greatest diversity of freshwater fish in the world. Some factors can contribute to identify significant changes in fish production, such as characterization based on common names, and synonyms or classifications only at the genus level. This creates noise in different types of analyzes and mistakes in determining effective productions, as well as levels of exploitation for management. Thus, this study aims to demonstrate the variation in fish production over the years 2001 and 2013, using control data from the fishing colony "Dr. Renato Pereira Gonçalves Z-31" in the municipality of Humaitá, southern Amazonas. These data were analyzed by collaborators from the Laboratory of Ichthyology and Fisheries Management of the Madeira River Valley, at the Federal University of Amazonas. The fish landing monitoring allowed the determination of the species caught in the regional fishery and evaluated the effect of the hydrological level and the pre- and post-installation periods of the Santo Antônio and Jirau HPPs in Rondônia, on the total production. The data set showed the significant decrease in fish production between 2008 and 2013. Among the factors that explain the observed changes are the mistakes in determining the effective production due to the lack of criteria in the grouping of many species, the absence of regulations, such as the "Portaria IBAMA Nº 48" which was created only in 2007, in addition to the installation period of the HPPs on the Madeira River. It was also possible to verify the effect of seasonality through hydrological quotas on fish production, with the highest values observed in July, August and September of the years analyzed.
亚马逊对于大陆采掘渔业来说非常重要,因为它拥有世界上最丰富的淡水鱼种类。一些因素有助于识别鱼类生产的重大变化,例如基于共同名称的特征,以及仅在属水平上的同义词或分类。这在不同类型的分析和确定有效产品的错误中产生了噪音,以及管理的开发水平。因此,本研究旨在展示2001年和2013年鱼类产量的变化,使用来自亚马逊州南部humait市“Dr. Renato Pereira gon alves Z-31”渔业殖民地的对照数据。来自亚马逊联邦大学马德拉河谷鱼类学和渔业管理实验室的合作者对这些数据进行了分析。鱼类登陆监测可以确定区域渔业捕获的物种,并评估Rondônia Santo Antônio和Jirau hpp的水文水平和安装前后时期对总产量的影响。该数据集显示,2008年至2013年期间鱼类产量显著下降。造成这些变化的原因包括:由于缺乏对许多物种进行分类的标准,在确定有效产量方面存在错误;缺乏法规,例如2007年才制定的“Portaria IBAMA Nº48”;此外,马德拉河上的hpp安装期也存在问题。还可以通过水文配额来核实季节性对鱼类生产的影响,在所分析的年份中,7月、8月和9月观察到的值最高。
{"title":"Database of the historical series of fisheries production in the middle Madeira River region, southwest of the Amazon, from 2001 to 2013","authors":"Keythiane Freire Ramos, L. S. Pelegrini, Jéssica Vieira Sardinha, R. Tartari, M. R. Anjos","doi":"10.53805/lads.v1i2.27","DOIUrl":"https://doi.org/10.53805/lads.v1i2.27","url":null,"abstract":"The Amazon is very important regarding the continental extractive fishing as it has the greatest diversity of freshwater fish in the world. Some factors can contribute to identify significant changes in fish production, such as characterization based on common names, and synonyms or classifications only at the genus level. This creates noise in different types of analyzes and mistakes in determining effective productions, as well as levels of exploitation for management. Thus, this study aims to demonstrate the variation in fish production over the years 2001 and 2013, using control data from the fishing colony \"Dr. Renato Pereira Gonçalves Z-31\" in the municipality of Humaitá, southern Amazonas. These data were analyzed by collaborators from the Laboratory of Ichthyology and Fisheries Management of the Madeira River Valley, at the Federal University of Amazonas. The fish landing monitoring allowed the determination of the species caught in the regional fishery and evaluated the effect of the hydrological level and the pre- and post-installation periods of the Santo Antônio and Jirau HPPs in Rondônia, on the total production. The data set showed the significant decrease in fish production between 2008 and 2013. Among the factors that explain the observed changes are the mistakes in determining the effective production due to the lack of criteria in the grouping of many species, the absence of regulations, such as the \"Portaria IBAMA Nº 48\" which was created only in 2007, in addition to the installation period of the HPPs on the Madeira River. It was also possible to verify the effect of seasonality through hydrological quotas on fish production, with the highest values observed in July, August and September of the years analyzed.","PeriodicalId":415033,"journal":{"name":"Latin American Data in Science","volume":"50 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-11-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"131170941","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
effect of short-term meteorological disturbances on the submerged aquatic vegetation and associated fauna in the Patos Lagoon estuary, southern Brazil 短期气象扰动对巴西南部帕托斯泻湖河口水下植被及相关动物群的影响
Pub Date : 2021-11-12 DOI: 10.53805/lads.v1i2.26
Dairana Misturini, Marianna Lanari, V. Lemos, Leonir A Colling
Occluded fronts are naturally cyclogenic areas that have been intensified by global warming. Studies evaluating the effects of occluded fronts in the submerged aquatic vegetation (SAV) and its associated fauna in shallow estuarine areas may provide insights on the impacts of climate change-induced extreme weather events on coastal ecosystems functioning. The present dataset describes data on benthic fauna and flora in the Patos Lagoon Estuary (PLE), in southern Brazil, seasonally obtained during intense occluded fronts. Using a hierarchical sample design, based on Beyond BACI protocols (Before/After and Control/Impact), fauna and flora were sampled before and after four occluded fronts passage throughout 2019.Three habitats were sampled: SAV Meadow, SAV Edge and adjacent Sandflat. A total of 432 macrozoobenthic samples (216 samples for stratum); 216 samples for bellow and aboveground biomass, vegetation coverage, canopy height and marine macrophytes morphology; 144 samples by sedimentology and organic matter; 72 water column depth measurements; and 8 temperature and salinity measurements were collected during the study period. The data is available at the Global Biodiversity Information Facility (GBIF), in Darwin Core standard format (DwC), organized according to the OBIS-ENV-DATA model, with CC-BY-NC-4-0 license for use. The present dataset adds to the comprehension of the temporal variability of estuarine benthic communities in subtropical systems, and how short-term meteorological process can affect zoo and fitobenthic communities in the context of climate changes.
闭塞锋是由于全球变暖而加剧的自然环流区。对浅水河口地区水下植被(SAV)及其相关动物群遮挡锋影响的评估研究,可能为气候变化引起的极端天气事件对沿海生态系统功能的影响提供见解。本数据集描述了巴西南部帕托斯泻湖河口(PLE)底栖动物和植物群的数据,这些数据是在强烈的闭塞锋期间季节性获得的。使用分层样本设计,基于Beyond BACI协议(前/后和控制/影响),在2019年全年四个被遮挡的前沿通过前后对动植物群进行了采样。三种生境分别为:SAV草甸、SAV边缘和邻近的沙滩。大型底栖动物标本432份(地层标本216份);216个地下和地上生物量、植被覆盖度、冠层高度和海洋大型植物形态样本;沉积学和有机质样品144份;72水柱深度测量;在研究期间收集了8次温度和盐度测量数据。这些数据可在全球生物多样性信息设施(GBIF)获得,采用达尔文核心标准格式(DwC),根据OBIS-ENV-DATA模型进行组织,并获得CC-BY-NC-4-0许可使用。本数据集有助于理解亚热带系统河口底栖生物群落的时间变化,以及气候变化背景下短期气象过程如何影响动物园和底栖生物群落。
{"title":"effect of short-term meteorological disturbances on the submerged aquatic vegetation and associated fauna in the Patos Lagoon estuary, southern Brazil","authors":"Dairana Misturini, Marianna Lanari, V. Lemos, Leonir A Colling","doi":"10.53805/lads.v1i2.26","DOIUrl":"https://doi.org/10.53805/lads.v1i2.26","url":null,"abstract":"Occluded fronts are naturally cyclogenic areas that have been intensified by global warming. Studies evaluating the effects of occluded fronts in the submerged aquatic vegetation (SAV) and its associated fauna in shallow estuarine areas may provide insights on the impacts of climate change-induced extreme weather events on coastal ecosystems functioning. The present dataset describes data on benthic fauna and flora in the Patos Lagoon Estuary (PLE), in southern Brazil, seasonally obtained during intense occluded fronts. Using a hierarchical sample design, based on Beyond BACI protocols (Before/After and Control/Impact), fauna and flora were sampled before and after four occluded fronts passage throughout 2019.Three habitats were sampled: SAV Meadow, SAV Edge and adjacent Sandflat. A total of 432 macrozoobenthic samples (216 samples for stratum); 216 samples for bellow and aboveground biomass, vegetation coverage, canopy height and marine macrophytes morphology; 144 samples by sedimentology and organic matter; 72 water column depth measurements; and 8 temperature and salinity measurements were collected during the study period. The data is available at the Global Biodiversity Information Facility (GBIF), in Darwin Core standard format (DwC), organized according to the OBIS-ENV-DATA model, with CC-BY-NC-4-0 license for use. The present dataset adds to the comprehension of the temporal variability of estuarine benthic communities in subtropical systems, and how short-term meteorological process can affect zoo and fitobenthic communities in the context of climate changes.","PeriodicalId":415033,"journal":{"name":"Latin American Data in Science","volume":"39 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128279754","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dados georreferenciados da pandemia de COVID-19 para o estado do Rio Grande do Sul 大南州COVID-19大流行的地理参考数据
Pub Date : 2021-11-12 DOI: 10.53805/lads.v1i2.23
Adriano De Cezaro, D. A. Sales, Jean Marcel de Almeida Espinoza, Joice Chaves Marques, M. Lazo, Paulo Victor Moreira Brito, Deivid Cristian Leal Alves
Nesta contribuição descrevemos como os dados referente ao número de casos positivos para COVID-19, reportados em cada um dos 21 agrupamentos estabelecidos pela secretaria de saúde pública do estado do Rio Grande do Sul (RS), entre os meses de Março de 2020 e Junho de 2021, são obtidos, georreferenciados e utilizados como suporte para a modelagem matemática proposta, a qual descreve de maneira preditiva a evolução da COVID-19 no estado. Tal conjunto de dados epidemiológicos, bem como as informações da progressão da COVID-19 provenientes da modelagem matemática são armazenadas em um banco de dados como parte do projeto “Exactum - Núcleo Transdisciplinar de Teoria, Modelagem, Tecnologia e Educação de Combate a Surtos, Endemias, Epidemias e Pandemias”
这种贡献描述数据的COVID阳性病例数-19,每一个报道的21个池由注册中心的公共卫生状况的南里奥格兰德州(RS),在2020年3月和2021年6月,是……georreferenciados和支持用于预测数学模型,描述了提出的方法的进化COVID -19。这组流行病学数据以及来自数学建模的COVID-19进展信息存储在一个数据库中,作为“Exactum——抗击疫情、地方病、流行病和大流行的理论、建模、技术和教育跨学科核心”项目的一部分。
{"title":"Dados georreferenciados da pandemia de COVID-19 para o estado do Rio Grande do Sul","authors":"Adriano De Cezaro, D. A. Sales, Jean Marcel de Almeida Espinoza, Joice Chaves Marques, M. Lazo, Paulo Victor Moreira Brito, Deivid Cristian Leal Alves","doi":"10.53805/lads.v1i2.23","DOIUrl":"https://doi.org/10.53805/lads.v1i2.23","url":null,"abstract":"Nesta contribuição descrevemos como os dados referente ao número de casos positivos para COVID-19, reportados em cada um dos 21 agrupamentos estabelecidos pela secretaria de saúde pública do estado do Rio Grande do Sul (RS), entre os meses de Março de 2020 e Junho de 2021, são obtidos, georreferenciados e utilizados como suporte para a modelagem matemática proposta, a qual descreve de maneira preditiva a evolução da COVID-19 no estado. Tal conjunto de dados epidemiológicos, bem como as informações da progressão da COVID-19 provenientes da modelagem matemática são armazenadas em um banco de dados como parte do projeto “Exactum - Núcleo Transdisciplinar de Teoria, Modelagem, Tecnologia e Educação de Combate a Surtos, Endemias, Epidemias e Pandemias”","PeriodicalId":415033,"journal":{"name":"Latin American Data in Science","volume":"8 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129659307","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Functional DNA annotation from a preliminary de novo genome assembly of Brycon orbignyanus, an endangered Neotropical migratory fish 濒危新热带洄游鱼类Brycon orbignyanus初步基因组组装的功能DNA注释
Pub Date : 2021-11-12 DOI: 10.53805/lads.v1i2.12
Raíssa D. Graciano, R. Oliveira, Isllas Miguel dos Santos, G. Yazbeck
The predicted sequence for thousands of genes revealed by a preliminary low-coverage genome assembly is presented for Brycon orbignyanus, an endangered migratory fish. Neotropical migratory fish stocks have been drastically reduced due to accumulated environmental pressure. Brycon orbignyanus, once one of the main fisheries species in the Platine Basin, is now very rare in nature and relies on spawning programs and a few well preserved or still untouched sites. The use of high-throughput DNA sequencing is still untapped regarding the functional genome information from B. orbignyanus. In order to help bridging this gap, we present a dataset resulting from the first functional annotation from a de novo genome assembly for B. orbignyanus, from short reads (90 bp), obtained by the HiSeq 2000 platform (Illumina). The annotation was performed for scaffolds over 10 kb using the Maker pipeline, with reference sequences taken from the NCBI for the Characiformes order. This annotation resulted in the prediction of 12,734 genes, classified with the aid of PANTHER. The data presented here can facilitate the development of basic research in this threatened species, along with practical biotechnological tools for different areas, such as commercial and environmental fish spawning operations (e.g. hormonal induction, growth) and human health.
本文提出了一种濒危洄游鱼类Brycon orbignyanus的初步低覆盖率基因组组装所揭示的数千个基因的预测序列。由于累积的环境压力,新热带洄游鱼类种群急剧减少。Brycon orbignyanus曾经是Platine盆地的主要渔业物种之一,现在在自然界中非常罕见,依赖于产卵计划和一些保存完好或仍未被破坏的地点。利用高通量DNA测序的方法来获取B. orbignyanus的功能基因组信息仍然是一个未开发的领域。为了帮助弥补这一差距,我们提出了一个数据集,该数据集来自于B. orbignyanus从头开始的基因组组装的第一个功能注释,来自于HiSeq 2000平台(Illumina)获得的短读(90 bp)。使用Maker管道对超过10 kb的支架进行注释,并根据characteries顺序从NCBI中获取参考序列。该注释结果预测了12,734个基因,并借助PANTHER进行了分类。这里提供的数据可以促进对这一受威胁物种的基础研究,以及为不同领域,例如商业和环境鱼类产卵作业(例如激素诱导、生长)和人类健康提供实用的生物技术工具。
{"title":"Functional DNA annotation from a preliminary de novo genome assembly of Brycon orbignyanus, an endangered Neotropical migratory fish","authors":"Raíssa D. Graciano, R. Oliveira, Isllas Miguel dos Santos, G. Yazbeck","doi":"10.53805/lads.v1i2.12","DOIUrl":"https://doi.org/10.53805/lads.v1i2.12","url":null,"abstract":"The predicted sequence for thousands of genes revealed by a preliminary low-coverage genome assembly is presented for Brycon orbignyanus, an endangered migratory fish. Neotropical migratory fish stocks have been drastically reduced due to accumulated environmental pressure. Brycon orbignyanus, once one of the main fisheries species in the Platine Basin, is now very rare in nature and relies on spawning programs and a few well preserved or still untouched sites. The use of high-throughput DNA sequencing is still untapped regarding the functional genome information from B. orbignyanus. In order to help bridging this gap, we present a dataset resulting from the first functional annotation from a de novo genome assembly for B. orbignyanus, from short reads (90 bp), obtained by the HiSeq 2000 platform (Illumina). The annotation was performed for scaffolds over 10 kb using the Maker pipeline, with reference sequences taken from the NCBI for the Characiformes order. This annotation resulted in the prediction of 12,734 genes, classified with the aid of PANTHER. The data presented here can facilitate the development of basic research in this threatened species, along with practical biotechnological tools for different areas, such as commercial and environmental fish spawning operations (e.g. hormonal induction, growth) and human health.","PeriodicalId":415033,"journal":{"name":"Latin American Data in Science","volume":"51 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"128904264","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Giant otter (Pteronura brasiliensis): a database of specimens held in major Brazilian zoological collections 巨型水獭(巴西利亚翼龙):巴西主要动物收藏的标本数据库
Pub Date : 2021-08-12 DOI: 10.53805/lads.v1i1.9
S. Siciliano, G. Lessa, R. Feio, Renata Emin‐Lima, A. Costa, F. O. Nascimento, F. R. Melo, G. Garbino
This dataset compiles information on giant otter (Pteronura brasiliensis) specimens housed in the major zoological collections of Brazil. We have personally examined the specimens, which constitute of skins, crania, and partial skeletons. We compiled information on collector, date, and locality of the specimens. A total of 56 giant otter specimens housed in six zoological collections were located. Of this total, 12 specimens do not have associated locality information. Of special relevance are the specimens from the Brazilian state of Rio Grande do Sul, Minas Gerais, and São Paulo, as they document the presence of the giant otter in the Atlantic rainforest, where it is now extirpated. Our dataset may be used in studies on distribution (past and present) of the species, and to delineate conservation policies of the giant otter. The specimens from the Atlantic rainforest may be used in museomics analyses, as they may represent lost haplotypes of P. brasiliensis.
该数据集汇编了巴西主要动物收藏馆中巨水獭(巴西翼獭)标本的信息。我们亲自检查了这些标本,包括皮肤、头盖骨和部分骨骼。我们收集了标本的收集者、日期和地点等信息。共有56个巨型水獭标本被安置在6个动物收藏馆。在这总数中,12个标本没有相关的地点信息。特别重要的是来自巴西南巴西大德州、米纳斯吉拉斯州和圣保罗州的标本,因为它们记录了大西洋雨林中巨型水獭的存在,现在它已经灭绝了。我们的数据集可用于研究该物种的分布(过去和现在),并描绘保护政策。来自大西洋雨林的标本可能用于博物馆组学分析,因为它们可能代表了巴西疟原虫的消失的单倍型。
{"title":"Giant otter (Pteronura brasiliensis): a database of specimens held in major Brazilian zoological collections","authors":"S. Siciliano, G. Lessa, R. Feio, Renata Emin‐Lima, A. Costa, F. O. Nascimento, F. R. Melo, G. Garbino","doi":"10.53805/lads.v1i1.9","DOIUrl":"https://doi.org/10.53805/lads.v1i1.9","url":null,"abstract":"This dataset compiles information on giant otter (Pteronura brasiliensis) specimens housed in the major zoological collections of Brazil. We have personally examined the specimens, which constitute of skins, crania, and partial skeletons. We compiled information on collector, date, and locality of the specimens. A total of 56 giant otter specimens housed in six zoological collections were located. Of this total, 12 specimens do not have associated locality information. Of special relevance are the specimens from the Brazilian state of Rio Grande do Sul, Minas Gerais, and São Paulo, as they document the presence of the giant otter in the Atlantic rainforest, where it is now extirpated. Our dataset may be used in studies on distribution (past and present) of the species, and to delineate conservation policies of the giant otter. The specimens from the Atlantic rainforest may be used in museomics analyses, as they may represent lost haplotypes of P. brasiliensis.","PeriodicalId":415033,"journal":{"name":"Latin American Data in Science","volume":"25 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-08-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130453690","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Banco de dados das aves amostradas no Parque Nacional Saint-Hilaire/Lange e entorno em 2012 e 2013, Floresta Atlântica no Litoral do Paraná. 2012年和2013年在圣希莱尔/兰格国家公园及其周边地区取样的鸟类数据库,parana海岸的大西洋森林。
Pub Date : 2021-08-12 DOI: 10.53805/lads.v1i1.22
L. A. M. Mestre
Neste estudo, apresentamos os dados de amostragens das aves registradas no Parque Nacional Saint Hilaire/Lange e em áreas de seu entorno (no município de Matinhos, Paraná). Os dados foram coletados em florestas submontana das encostas, abaixo de 200m de altitude, em quatro expedições de campo (1–13 de outubro 2012, 7–17 de dezembro 2012, 19–27 de março 2013 e 18–26 de julho 2013). Foram usadas 30 redes de neblina para as capturas (2 grupos de 15 redes de 12m, malha 30cm), abertas em dois dias consecutivos em cada área (total 5400h/redes). Ainda foram registradas as aves em 184 pontos de escuta (10 minutos, raio 50m) feitos próximos as áreas amostradas. Foram capturados 1666 indivíduos de 98 espécies (destes, 416 foram recapturados). Nos pontos de escuta, foram registrados 2051 indivíduos de 143 espécies. As espécies mais capturadas foram Turdus albicollis, Ramphodon naevius, Chiroxiphia caudata, Thalurania glaucopis e Tachyphonus coronatus. Nos pontos de escuta, as espécies mais frequentemente registradas foram Tangara cyanocephala, Basileuterus culicivorus, Turdus flavipes, Chiroxiphia caudata e Ramphodon naevius. A avifauna ocorrente nas áreas modificadas no entorno do Parque é influenciada pela matriz e pela estrutura local da vegetação. O presente estudo fornece dados da abundância e riqueza de aves para uma região pouco estudada e de grande diversidade biológica, permitindo avaliar a distribuição de aves e as áreas no entorno do Parque Nacional Saint Hilaire/Lange. Essas informações podem ser utilizadas em futuros estudos e ações conservacionistas na área. 
在这项研究中,我们提供了在圣希莱尔/兰格国家公园及其周边地区(马汀霍斯市,parana)记录的鸟类样本数据。通过4次实地考察(2012年10月1 - 13日、2012年12月7 - 17日、2013年3月19 - 27日和2013年7月18 - 26日),在海拔200米以下的亚山地山坡森林收集了数据。使用30张雾网(2组15张网,12米,30厘米目),每个区域连续开放2天(共5400h/网)。在取样区域附近的184个监测点(10分钟,半径50米)也记录了鸟类。共捕获98种1666只,其中416只被捕获。在监测点共记录143种2051只。捕获最多的物种有白斑Turdus albicollis、Ramphodon naevius、Chiroxiphia caudata、Thalurania glaucopis和Tachyphonus coronatus。在监测点,最常被记录的物种为蓝头坦加拉、库利西沃斯、黄Turdus flavipes、尾Chiroxiphia caudata和Ramphodon naevius。公园周围改良区域的鸟类受到基质和当地植被结构的影响。本研究提供了一个生物多样性高、研究较少的地区的鸟类丰度和丰富度数据,以评估鸟类分布和圣希莱尔/兰格国家公园周边地区。这些信息可用于该地区未来的研究和保护行动。
{"title":"Banco de dados das aves amostradas no Parque Nacional Saint-Hilaire/Lange e entorno em 2012 e 2013, Floresta Atlântica no Litoral do Paraná.","authors":"L. A. M. Mestre","doi":"10.53805/lads.v1i1.22","DOIUrl":"https://doi.org/10.53805/lads.v1i1.22","url":null,"abstract":"Neste estudo, apresentamos os dados de amostragens das aves registradas no Parque Nacional Saint Hilaire/Lange e em áreas de seu entorno (no município de Matinhos, Paraná). Os dados foram coletados em florestas submontana das encostas, abaixo de 200m de altitude, em quatro expedições de campo (1–13 de outubro 2012, 7–17 de dezembro 2012, 19–27 de março 2013 e 18–26 de julho 2013). Foram usadas 30 redes de neblina para as capturas (2 grupos de 15 redes de 12m, malha 30cm), abertas em dois dias consecutivos em cada área (total 5400h/redes). Ainda foram registradas as aves em 184 pontos de escuta (10 minutos, raio 50m) feitos próximos as áreas amostradas. Foram capturados 1666 indivíduos de 98 espécies (destes, 416 foram recapturados). Nos pontos de escuta, foram registrados 2051 indivíduos de 143 espécies. As espécies mais capturadas foram Turdus albicollis, Ramphodon naevius, Chiroxiphia caudata, Thalurania glaucopis e Tachyphonus coronatus. Nos pontos de escuta, as espécies mais frequentemente registradas foram Tangara cyanocephala, Basileuterus culicivorus, Turdus flavipes, Chiroxiphia caudata e Ramphodon naevius. A avifauna ocorrente nas áreas modificadas no entorno do Parque é influenciada pela matriz e pela estrutura local da vegetação. O presente estudo fornece dados da abundância e riqueza de aves para uma região pouco estudada e de grande diversidade biológica, permitindo avaliar a distribuição de aves e as áreas no entorno do Parque Nacional Saint Hilaire/Lange. Essas informações podem ser utilizadas em futuros estudos e ações conservacionistas na área. ","PeriodicalId":415033,"journal":{"name":"Latin American Data in Science","volume":"245 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-08-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"129786804","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Data analysis reveals that extreme events have increased the flood inundations in the Taquari River´s Valley, southern Brazil 数据分析显示,极端事件增加了巴西南部塔夸里河谷的洪水泛滥
Pub Date : 2021-07-26 DOI: 10.53805/lads.v1i1.20
F. M. Tognoli, Sabrina Deconti Bruski, T. P. Araújo
Flood inundations represent more than 62% of the deaths caused by natural disasters in Brazil. The dataset comprises the records of the Encantado´s pluviometric station, a municipality located beside the margin of the Taquari River in southern Brazil, which comprises the rainfall time series (n = 36,466) over 78 years, from April 1943 to December 2020. Complementary datasets also include the annual volume of precipitation per year and the level reached by the Taquari River during 44 flood inundations since 1941. The number of events is subsampled because only 32 years have the complete record of the river level. Three of the five major flood inundations at Encantado occurred after 2001, and the more severe flood recorded the maximum level of the Taquari River (20,27 meters) on July 8th, 2020. Thirty-four percent of all flood inundations in the city were recorded between 2011 and 2020. The months of July to October record 70% of all the events, but there is no record of floods in February and December throughout the data series. The human occupation of the floodplain has been fast in the last decades, and most of the urban area has a potential risk of being affected by flood inundations. Moreover, extreme rainfall events and flood events have been more frequent in the last 30 years. This database can contribute as a starting point for developing predictive models and verifying a possible correlation of floods with extreme events and global climatic changes.
洪水淹没占巴西自然灾害造成的死亡人数的62%以上。该数据集包括Encantado的降雨测量站的记录,该站点位于巴西南部Taquari河边缘的一个自治市,其中包括1943年4月至2020年12月78年的降雨时间序列(n = 36,466)。补充数据集还包括每年的年降水量和塔夸里河自1941年以来44次洪水淹没期间达到的水位。事件的数量是次采样的,因为只有32年有完整的河流水位记录。Encantado的5次大洪水中有3次发生在2001年以后,更严重的一次洪水在2020年7月8日达到了Taquari河的最高水位(20,27米)。2011年至2020年期间,该市有34%的洪水被淹没。7月至10月记录了所有事件的70%,但在整个数据系列中没有2月和12月的洪水记录。在过去的几十年里,人类对洪泛区的占领速度很快,大部分城市地区都有受到洪水淹没影响的潜在风险。此外,极端降雨事件和洪水事件在过去30年中更加频繁。该数据库可以作为开发预测模型和验证洪水与极端事件和全球气候变化之间可能的相关性的起点。
{"title":"Data analysis reveals that extreme events have increased the flood inundations in the Taquari River´s Valley, southern Brazil","authors":"F. M. Tognoli, Sabrina Deconti Bruski, T. P. Araújo","doi":"10.53805/lads.v1i1.20","DOIUrl":"https://doi.org/10.53805/lads.v1i1.20","url":null,"abstract":"Flood inundations represent more than 62% of the deaths caused by natural disasters in Brazil. The dataset comprises the records of the Encantado´s pluviometric station, a municipality located beside the margin of the Taquari River in southern Brazil, which comprises the rainfall time series (n = 36,466) over 78 years, from April 1943 to December 2020. Complementary datasets also include the annual volume of precipitation per year and the level reached by the Taquari River during 44 flood inundations since 1941. The number of events is subsampled because only 32 years have the complete record of the river level. Three of the five major flood inundations at Encantado occurred after 2001, and the more severe flood recorded the maximum level of the Taquari River (20,27 meters) on July 8th, 2020. Thirty-four percent of all flood inundations in the city were recorded between 2011 and 2020. The months of July to October record 70% of all the events, but there is no record of floods in February and December throughout the data series. The human occupation of the floodplain has been fast in the last decades, and most of the urban area has a potential risk of being affected by flood inundations. Moreover, extreme rainfall events and flood events have been more frequent in the last 30 years. This database can contribute as a starting point for developing predictive models and verifying a possible correlation of floods with extreme events and global climatic changes.","PeriodicalId":415033,"journal":{"name":"Latin American Data in Science","volume":"158 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2021-07-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"122889456","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
期刊
Latin American Data in Science
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1