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Impact of potassium test sample rejections on routine laboratory service, South Africa 钾测试样本被拒对常规实验室服务的影响,南非
IF 1.1 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-12-22 DOI: 10.4102/ajlm.v12i1.2239
Sarah McAlpine, B. Chale-Matsau
Background: Accurate potassium measurements are necessary for effective clinical management of hyperkalaemia. Pre-analytical factors may affect laboratory measurements, leading to erroneous results and inappropriate patient management and negatively impact the efficiency and finances of laboratories and hospitals.Objective: This study evaluated the impact of rejected potassium test requests on laboratory service.Methods: We conducted a retrospective descriptive study to assess potassium test data at a public laboratory in Pretoria, Gauteng, South Africa, using samples collected from an academic hospital, peripheral hospitals, and outpatient clinics between January 2018 to December 2018. We assessed the relationship between reasons for rejection and health facility type, as well as financial implications for the laboratory.Results: The potassium result rejection rate was 15.1% (29 806 samples), out of the 197 405 requests received. The most common reasons for rejection were old sample ( 1 day old) (41.4%; 12 348 rejections) and haemolysis (38.2%; 11 398 rejections). The most frequent reason for rejections at the central, academic hospital was haemolysis (42.0%), while old sample was the most common reason for rejection at peripheral hospitals (43.4%; 4119/9493 requests) and outpatient health facilities (57.2%; 7208/12 605 requests) (p = 0.022). The total cost of potassium sample rejection over the study period was substantial, given the resource constraints in this setting.Conclusion: Peripheral hospitals and outpatient departments accounted for the majority of rejected potassium testing results, possibly resulting from delays in transportation; causing substantial financial impact on the laboratory. Improved sample collection, handling, and expedited transportation are recommended.What this study adds: This study highlights the importance of appropriate sample collection and handling and the undesirable consequences of non-adherence to these pre-analytical considerations.
背景:准确的血钾测量是临床有效治疗高钾血症的必要条件。分析前的因素可能会影响实验室的测量结果,导致错误的结果和不恰当的患者管理,并对实验室和医院的效率和财务状况产生负面影响:本研究评估了钾检测申请被拒对实验室服务的影响:我们进行了一项回顾性描述性研究,评估了南非豪登省比勒陀利亚市一家公共实验室的钾测试数据,使用了 2018 年 1 月至 2018 年 12 月期间从一家学术医院、外围医院和门诊诊所收集的样本。我们评估了拒收原因与医疗机构类型之间的关系,以及对实验室的财务影响:在收到的 197 405 份申请中,钾结果拒收率为 15.1%(29 806 份样本)。最常见的拒收原因是样本过旧(1 天前)(41.4%;12 348 例拒收)和溶血(38.2%;11 398 例拒收)。在中心学术医院,最常见的拒绝原因是溶血(42.0%),而在外围医院(43.4%;4119/9493 次申请)和门诊医疗机构(57.2%;7208/12605 次申请),旧样本是最常见的拒绝原因(p = 0.022)。在研究期间,由于资源有限,钾样本被拒绝的总成本相当可观:结论:外围医院和门诊部是钾检测结果被拒的主要原因,这可能是由于运输延误造成的;这对实验室造成了巨大的经济影响。建议改进样本的采集、处理和快速运输:这项研究强调了适当采集和处理样本的重要性,以及不遵守这些分析前注意事项的不良后果。
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引用次数: 0
Critical values notification: A nationwide survey of practices among clinical laboratories across Nigeria. 临界值通知:尼日利亚全国临床实验室实践调查。
IF 1.1 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-12-15 eCollection Date: 2023-01-01 DOI: 10.4102/ajlm.v12i1.2249
Lucius C Imoh, Idris Y Mohammed, Ifeyinwa D Nnakenyi, Ephraim U Egbuagha, Tomisin M Adaja, Chinelo P Onyenekwu

Background: Critical value notification (CVN) entails notifying doctors or other laboratory users of aberrant laboratory results that threaten the patient's life and of any values for which reporting delays could negatively impact the patient's health. Critical value notification practices in clinical laboratories in Nigeria and sub-Saharan Africa are largely unknown.

Objective: We conducted a nationwide survey to obtain baseline information on CVN practice by Nigeria's laboratories.

Methods: This cross-sectional study was conducted among purposively selected secondary- and tertiary-tier, public and private clinical laboratories across northern and southern Nigeria between October 2015 and December 2015. Consenting senior laboratory staff completed and returned a structured questionnaire, that gathered data on respondents' demographics, designations, and institutional characteristics and practices regarding CVN.

Results: One hundred and thirty-four laboratories responded to the questionnaires. Only 69 (51.5 %) laboratories practised CVN; only 23 (33.3%) had existing written policies guiding the practice. Most (43; 62.3%) laboratories use similar critical values (CVs) for adult and paediatric populations. Most laboratories (27; 39.1%) obtained their CVs by combining published literature and local opinions from stakeholders. Physical dispatch (42; 60.9%) followed by telephone calls (38; 55.1%) were the most common means of notification. Private laboratories, compared with public hospital laboratories, were likelier to have separate paediatric CV lists (p = 0.019) and practise telephone notifications (p < 0.001).

Conclusion: Critical value notification practices vary and are often suboptimal in many clinical laboratories in Nigeria, which is exacerbated by the absence of guiding policies and national recommendations for post-analytical procedures.

What this study adds: This study provides baseline information on CVN practice by Nigeria's laboratories. The study explores the causes of practice variations that can serve as a foundation for enhancing critical reporting and post-analytical services, particularly in clinical laboratories in sub-Saharan Africa.

背景:临界值通知(CVN)是指将危及患者生命的异常化验结果通知医生或其他化验室使用者,以及将报告延误可能对患者健康产生负面影响的任何数值通知医生或其他化验室使用者。尼日利亚和撒哈拉以南非洲地区临床实验室的临界值通知做法大多不为人知:我们在全国范围内开展了一项调查,以获得尼日利亚实验室临界值通报实践的基线信息:这项横断面研究于 2015 年 10 月至 2015 年 12 月期间在尼日利亚北部和南部有目的地选择了二级和三级、公立和私立临床实验室进行。经同意的高级实验室工作人员填写并交回了一份结构化问卷,该问卷收集了受访者的人口统计学、职称、机构特点以及有关 CVN 的做法等方面的数据:134家实验室对问卷做出了回复。只有 69 家实验室(51.5%)实施了 CVN;只有 23 家实验室(33.3%)制定了指导 CVN 实践的书面政策。大多数实验室(43;62.3%)对成人和儿童使用相似的临界值(CV)。大多数实验室(27;39.1%)的临界值是结合已发表的文献和当地相关人员的意见得出的。最常见的通知方式是派人送达(42;60.9%),其次是电话通知(38;55.1%)。与公立医院实验室相比,私立实验室更有可能拥有单独的儿科 CV 列表(p = 0.019),并采用电话通知(p < 0.001):尼日利亚许多临床实验室的临界值通知做法各不相同,而且往往不尽如人意,而缺乏分析后程序的指导政策和国家建议又加剧了这种情况:本研究提供了尼日利亚实验室 CVN 实践的基线信息。本研究的贡献:本研究提供了尼日利亚实验室 CVN 实践的基线信息,探讨了实践差异的原因,为加强关键报告和分析后服务奠定了基础,尤其是在撒哈拉以南非洲地区的临床实验室。
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引用次数: 0
Bridging the gaps in newborn screening programmes: Challenges and opportunities to detect haemoglobinopathies in Africa. 缩小新生儿筛查计划的差距:非洲检测血红蛋白病的挑战与机遇。
IF 1.1 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-12-14 eCollection Date: 2023-01-01 DOI: 10.4102/ajlm.v12i1.2225
Seth Twum, Kwadwo Fosu, Robin A Felder, Kwabena A N Sarpong

Background: Haemoglobinopathies, including sickle cell disease and β-thalassaemia, are monogenic disorders with a relatively higher prevalence among malaria-endemic areas in Africa. Despite this prevalence, most African countries lack the necessary resources for diagnosing and managing these debilitating conditions.

Aim: This study provides a critical review of newborn screening for detecting haemoglobinopathies in Africa, highlighting challenges and proposing strategies for improved diagnosis and management.

Methods: A literature search on haemoglobinopathies in Africa was conducted in PubMed, Google Scholar and ScienceDirect, using specific keywords and Boolean operators, including articles published from January 1981 to December 2022.

Results: The data show that sickle cell disease is prevalent among populations in Central and West Africa; however, β-thalassaemia is prevalent among people in the northern parts of Africa. Newborn screening pilot initiatives for haemoglobinopathies were being implemented in Angola, Nigeria, Ghana, the Democratic Republic of Congo and the Republic of Benin. The cost of testing, lack of sufficient and accessible medical records, and inadequacy in healthcare infrastructure pose significant challenges in bridging the gaps in newborn screening. Furthermore, the stigmatisation and lack of awareness of haemoglobinopathies and access to newborn screening programmes pose additional challenges.

Conclusion: This review highlights the challenges associated with haemoglobinopathy testing, effective strategies for mitigating these challenges, and future perspectives for expanding efforts toward detecting and managing these disorders across Africa. Providing affordable diagnostic tools, mobile clinics, government subsidies, education campaigns, and the implementation of electronic medical records systems could help bridge the gaps in newborn screening in Africa.

What this study adds: The study presents a comprehensive view of newborn screening of haemoglobinopathies in Africa, provides a detailed outline of the challenges faced by newborn screening for haemoglobinopathies in Africa, and offers strategies for better diagnosis and care.

背景:血红蛋白病(包括镰状细胞病和β-地中海贫血)是一种单基因疾病,在非洲疟疾流行地区的发病率相对较高。目的:本研究对非洲新生儿血红蛋白病筛查进行了深入研究,指出了面临的挑战,并提出了改进诊断和管理的策略:方法:使用特定关键词和布尔运算符在 PubMed、Google Scholar 和 ScienceDirect 上对非洲血红蛋白病进行文献检索,包括 1981 年 1 月至 2022 年 12 月期间发表的文章:数据显示,镰状细胞病在非洲中部和西部的人群中很普遍;然而,β-地中海贫血症在非洲北部地区的人群中很普遍。安哥拉、尼日利亚、加纳、刚果民主共和国和贝宁共和国正在实施新生儿血红蛋白病筛查试点举措。检测费用高昂、缺乏充足且可获取的医疗记录以及医疗保健基础设施不足,都对缩小新生儿筛查方面的差距构成了巨大挑战。此外,人们对血红蛋白病和新生儿筛查计划的轻蔑和缺乏认识也构成了额外的挑战:本综述强调了与血红蛋白病检测相关的挑战、减轻这些挑战的有效策略以及在非洲各地扩大检测和管理这些疾病的工作的未来前景。提供负担得起的诊断工具、流动诊所、政府补贴、教育活动以及实施电子病历系统有助于缩小非洲在新生儿筛查方面的差距:本研究全面介绍了非洲新生儿血红蛋白病筛查的情况,详细概述了非洲新生儿血红蛋白病筛查所面临的挑战,并提出了改善诊断和护理的策略。
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引用次数: 0
Impact of novel software on laboratory expenditure at an academic hospital in South Africa. 新型软件对南非一家学术医院实验室支出的影响。
IF 1.1 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-11-30 eCollection Date: 2023-01-01 DOI: 10.4102/ajlm.v12i1.2159
Zoliswa Mayekiso, Kelechi E Oladimeji, Guillermo A Pulido Estrada, Charles Hongoro, Teke R Apalata

Background: Countries across the globe report an increase in expenditure associated with medical laboratory testing. In 2020, the United States Department of Health and Human Services reported that laboratory test expenditures increased by $459 million US dollars (USD) from $7.1 billion USD in 2018. In South Africa, laboratory testing expenditure in the public sector increased from $415 million USD in 2014 to $723 million USD in 2021.

Objective: This study aimed to evaluate the impact of an innovative software, electronic gatekeeping (EGK), on medical laboratory test expenditures at Nelson Mandela Academic Hospital, in the Eastern Cape, South Africa.

Methods: In this cross-sectional study, an interrupted time series analysis technique was used to evaluate trends in expenditure during a 48-month study period. To measure the impact of EGK on laboratory expenditure, we analysed laboratory expenditure over two study periods: a period of 24 months occurring before EGK implementation (01 June 2013 to 31 May 2015) and a period of 24 months occurring during EGK implementation (01 June 2015 to 30 May 2017).

Results: There was a significant reduction (211 928 fewer tests) in the number of tests performed during the intervention (434 790) compared to before the intervention (646 718). Laboratory test expenditure was $1 663 756.72 USD before the intervention period and $1 105 036.88 USD during the intervention period, demonstrating a cost savings of $558 719.84 USD.

Conclusion: Electronic gatekeeping is a cost-effective intervention for managing medical laboratory expenditures. We recommend that the health sector scale up this intervention nationally.

What this study adds: Using an interrupted time series interval, the authors determined that EGK is a cost-effective intervention for managing medical laboratory expenditures at a tertiary hospital. This study's findings can promote and contribute to improved laboratory systems and test investigations.

背景:全球各国报告与医学实验室检测相关的支出有所增加。2020年,美国卫生与公众服务部报告称,实验室检测支出从2018年的71亿美元增加了4.59亿美元。在南非,公共部门的实验室检测支出从2014年的4.15亿美元增加到2021年的7.23亿美元。目的:本研究旨在评估一种创新软件——电子把关(EGK)对南非东开普省纳尔逊·曼德拉学术医院医学实验室检测支出的影响。方法:在这项横断面研究中,采用中断时间序列分析技术来评估48个月研究期间的支出趋势。为了衡量EGK对实验室支出的影响,我们分析了两个研究期间的实验室支出:EGK实施前的24个月(2013年6月1日至2015年5月31日)和EGK实施期间的24个月(2015年6月1日至2017年5月30日)。结果:与干预前(646 718)相比,干预期间(434 790)进行的测试次数显著减少(减少了211 928次)。干预前的实验室检测支出为1 663 756.72美元,干预期间为1 105 036.88美元,节省成本为558 719.84美元。结论:电子把关是一种具有成本效益的管理医学实验室支出的干预措施。我们建议卫生部门在全国范围内扩大这种干预措施。本研究补充的内容:使用中断的时间序列间隔,作者确定EGK是管理三级医院医学实验室支出的一种具有成本效益的干预措施。本研究的发现可以促进和有助于改进实验室系统和测试调查。
{"title":"Impact of novel software on laboratory expenditure at an academic hospital in South Africa.","authors":"Zoliswa Mayekiso, Kelechi E Oladimeji, Guillermo A Pulido Estrada, Charles Hongoro, Teke R Apalata","doi":"10.4102/ajlm.v12i1.2159","DOIUrl":"10.4102/ajlm.v12i1.2159","url":null,"abstract":"<p><strong>Background: </strong>Countries across the globe report an increase in expenditure associated with medical laboratory testing. In 2020, the United States Department of Health and Human Services reported that laboratory test expenditures increased by $459 million US dollars (USD) from $7.1 billion USD in 2018. In South Africa, laboratory testing expenditure in the public sector increased from $415 million USD in 2014 to $723 million USD in 2021.</p><p><strong>Objective: </strong>This study aimed to evaluate the impact of an innovative software, electronic gatekeeping (EGK), on medical laboratory test expenditures at Nelson Mandela Academic Hospital, in the Eastern Cape, South Africa.</p><p><strong>Methods: </strong>In this cross-sectional study, an interrupted time series analysis technique was used to evaluate trends in expenditure during a 48-month study period. To measure the impact of EGK on laboratory expenditure, we analysed laboratory expenditure over two study periods: a period of 24 months occurring before EGK implementation (01 June 2013 to 31 May 2015) and a period of 24 months occurring during EGK implementation (01 June 2015 to 30 May 2017).</p><p><strong>Results: </strong>There was a significant reduction (211 928 fewer tests) in the number of tests performed during the intervention (434 790) compared to before the intervention (646 718). Laboratory test expenditure was $1 663 756.72 USD before the intervention period and $1 105 036.88 USD during the intervention period, demonstrating a cost savings of $558 719.84 USD.</p><p><strong>Conclusion: </strong>Electronic gatekeeping is a cost-effective intervention for managing medical laboratory expenditures. We recommend that the health sector scale up this intervention nationally.</p><p><strong>What this study adds: </strong>Using an interrupted time series interval, the authors determined that EGK is a cost-effective intervention for managing medical laboratory expenditures at a tertiary hospital. This study's findings can promote and contribute to improved laboratory systems and test investigations.</p>","PeriodicalId":45412,"journal":{"name":"African Journal of Laboratory Medicine","volume":"12 1","pages":"2159"},"PeriodicalIF":1.1,"publicationDate":"2023-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10696537/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138499739","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Taking the train of digital health and artificial intelligence to improve medical laboratory service in Africa: Key considerations. 接受数字健康和人工智能培训,改善非洲医疗实验室服务:关键考虑因素。
IF 1.1 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-11-30 eCollection Date: 2023-01-01 DOI: 10.4102/ajlm.v12i1.2329
Rajiv Erasmus, Pascale Ondoa
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引用次数: 0
Serum-free light chain test utilisation at a South African academic laboratory and comparison with serum protein electrophoresis results. 无血清轻链测试在南非学术实验室的应用和血清蛋白电泳结果的比较。
IF 1.1 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-11-24 eCollection Date: 2023-01-01 DOI: 10.4102/ajlm.v12i1.2201
Razia B Banderker, Fatima B Fazel, Annalise E Zemlin, Aye-Aye Khine, Thumeka P Jalavu

Background: Serum protein electrophoresis (SPE), urine protein electrophoresis and immunofixation electrophoresis were traditionally utilised for the diagnosis of monoclonal gammopathies. The quantitative serum-free light chain (SFLC) assay is reportedly more sensitive and has been introduced to recent clinical guidelines.

Objective: This study aimed to investigate SFLC test utilisation and describe SPE findings in patients with abnormal SFLC ratios.

Methods: A retrospective audit of SFLC analyses was conducted in Cape Town, South Africa, from May 2018 to April 2020. Agreement between abnormal SFLC ratios and SPE results was determined in a sub-group of patients screened for monoclonal gammopathies. Serum-free light chains were analysed using Freelite® Kappa and Lambda assays.

Results: Of the 1425 patients included in the audit, 741 (52%) had abnormal SFLC ratios; 636 (45%) had increased and 105 (7%) had decreased SFLC ratios. In a sub-group analysis of 117 new patients with an abnormal SFLC ratio, 57 had a monoclonal protein (M-protein) on SPE (49%), and 60 (51%) did not. Four out of 60 patients without M-protein had a plasma cell dyscrasia, while renal impairment or inflammatory response accounted for the rest. Of the 57 patients with a M-protein and abnormal SFLC ratio, 41 (72%) had a plasma cell dyscrasia, seven (12%) had lymphomas and nine patients (16%) were unclassifiable.

Conclusion: Serum-free light chains should be requested when there is a high index of clinical suspicion. Neither SFLC nor SPE should be performed in isolation when screening patients for monoclonal gammopathy, to ensure that no patient is missed.

What this study adds: The study adds to the evidence on SFLC test utilisation. Serum protein electrophoresis alone may miss cases of light chain myeloma, while SFLC performed in isolation may produce false positive results in the setting of inflammatory disorders or renal impairment, leading to unnecessary further investigation.

背景:血清蛋白电泳(SPE)、尿蛋白电泳和免疫固定电泳传统上用于单克隆伽玛病的诊断。据报道,定量无血清轻链(SFLC)测定更敏感,并已被引入最近的临床指南。目的:本研究旨在调查SFLC测试的使用情况,并描述SFLC比率异常患者的SPE结果。方法:对2018年5月至2020年4月在南非开普敦进行的SFLC分析进行回顾性审核。在筛选单克隆伽玛病的患者亚组中,确定了异常SFLC比率和SPE结果之间的一致性。使用Freelite®Kappa和Lambda法分析无血清轻链。结果:纳入审核的1425例患者中,SFLC异常741例(52%);636例(45%)患者SFLC增高,105例(7%)患者SFLC降低。在117例SFLC比例异常的新患者的亚组分析中,57例(49%)在SPE上有单克隆蛋白(m蛋白),60例(51%)没有。在60名没有m蛋白的患者中,有4名患有浆细胞病变,而其余的则是肾脏损害或炎症反应。在57例m蛋白和SFLC比例异常的患者中,41例(72%)有浆细胞病变,7例(12%)有淋巴瘤,9例(16%)无法分类。结论:临床怀疑指数高时应要求进行无血清轻链检测。在筛查单克隆伽玛病患者时,SFLC和SPE都不应单独进行,以确保没有遗漏患者。这项研究补充了什么:这项研究增加了SFLC测试使用的证据。单独进行血清蛋白电泳可能会遗漏轻链骨髓瘤病例,而单独进行SFLC可能会在炎症性疾病或肾脏损害的情况下产生假阳性结果,导致不必要的进一步调查。
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引用次数: 0
Time to treat the climate and nature crisis as one indivisible global health emergency. 是时候将气候和自然危机视为一个不可分割的全球卫生紧急事件。
IF 1.1 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-11-21 eCollection Date: 2023-01-01 DOI: 10.4102/ajlm.v12i1.2335
Kamran Abbasi, Parveen Ali, Virginia Barbour, Thomas Benfield, Kirsten Bibbins, Stephen Hancocks, Richard Horton, Laurie Laybourn-Langton, Robert Mash, Peush Sahni, Wadeia M Sharief, Paul Yonga, Chris Zielinski
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引用次数: 0
Role of CTX-M-15 gene in spread of extended-spectrum beta-lactamases among immunocompetent patients in Ghana. CTX-M-15基因在加纳免疫功能正常患者中广谱β -内酰胺酶传播中的作用
IF 1.1 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-11-20 eCollection Date: 2023-01-01 DOI: 10.4102/ajlm.v12i1.2135
Noah Obeng-Nkrumah, Gloria D Tawiah-Abrokwa, Enid Owusu, Francisca Duah, Daniel Oduro-Mensah, Paul Kwao, Bako Evariste, Appiah-Korang Labi

Background: Patients with faecal carriage of extended-spectrum beta-lactamases (ESBL)-producing Enterobacterales serve as reservoirs and sources of dissemination and infection.

Objective: This report examined immunocompetent patients for faecal carriage of ESBL-producing Enterobacterales in a district care hospital setting in Ghana.

Methods: Between March 2019 and May 2020, cross-sectional sampling was performed to enrol patients and conduct questionnaire-structured interviews for factors that predispose patients to ESBL faecal carriage. Faecal samples from study patients were quantified for ESBL-producing Enterobacterales. The ESBL genes were characterised by polymerase chain reaction and sequencing.

Results: The overall proportion of ESBL faecal carriage was 35.5% (n = 38/107). The blaCTX-M gene, mostly CTX-M-15, was detected in 89.5% (n = 34/38) of the ESBL-producing isolates. The other ESBL types included blaSHV (n = 3) and blaOXA (n = 1). The CTX-M-15-positive isolates, when present in a faecal sample compared to the non-ESBL-CTX-M-15 isolates, constituted the predominant faecal Enterobacterales, with significantly higher colony counts than all other enterobacteria in that sample. In multivariate regression, independent risk factors for faecal carriage of ESBL-producing Enterobacterales were hospitalisation in the past year, infections since admission, use of antibiotics in the past 6 weeks, and admission from another hospital.

Conclusion: The study found that CTX-M-15-producing isolates were the predominant faecal Enterobacterales, and that further investigations are needed to determine the reasons behind this dominance.

What this study adds: The CTX-M-15-producing isolates dominance in this study shows the misuse and abuse of antibiotics in an African medical facility and indicates the potential role of immunity in controlling ESBL spread, which is to be investigated further.

背景:粪便携带广谱β -内酰胺酶(ESBL)产生肠杆菌的患者是传播和感染的储存库和来源。目的:本报告在加纳的一家地区护理医院检查了免疫功能正常的患者粪便携带产esbl肠杆菌。方法:在2019年3月至2020年5月期间,采用横断面抽样方法招募患者,并对患者易患ESBL粪便携带的因素进行问卷式访谈。对研究患者的粪便样本进行了产esbl肠杆菌的定量检测。ESBL基因经聚合酶链反应和测序鉴定。结果:ESBL粪便携带总比例为35.5% (n = 38/107)。89.5% (n = 34/38)的产esbl分离株中检测到blaCTX-M基因,主要为CTX-M-15。其他ESBL类型包括blaSHV (n = 3)和blaOXA (n = 1)。与非ESBL- ctx - m -15分离株相比,粪便样本中ctx - m -15阳性分离株构成了粪便肠杆菌的优势菌群,其菌落计数明显高于该样本中的所有其他肠杆菌。在多因素回归中,产esbl肠杆菌粪便携带的独立危险因素为过去一年内住院、入院后感染、过去6周内使用抗生素以及从其他医院入院。结论:本研究发现产生ctx - m -15的分离株是粪便肠杆菌的优势菌株,需要进一步调查以确定这种优势背后的原因。本研究补充的内容:本研究中产生ctx - m -15的分离株占主导地位,表明非洲医疗设施中抗生素的误用和滥用,并表明免疫在控制ESBL传播方面的潜在作用,这有待进一步调查。
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引用次数: 0
Epidemic forecast and preparedness for explosive-cerebrospinal meningitis outbreak in Nigeria using the preventive vaccination strategy. 使用预防性疫苗接种战略对尼日利亚爆炸性脑脊髓膜炎疫情进行流行病预测和防备。
IF 1.1 Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-11-17 eCollection Date: 2023-01-01 DOI: 10.4102/ajlm.v12i1.2086
Iseimokumo C Peletiri, Rosemary C Nwachukwu, Diweni C Peletiri, Esther Q Onoja, Charity T Tulagha, Ikaprite I Igbalibo, Grace M Ayanbimpe, Eugene I Ikeh

Background: Within the African meningitis belt, yearly outbreaks of cerebrospinal meningitis (CSM), with incidence rates of 10-100 cases per 100 000 population, are typically punctuated by explosive epidemics occurring every 8-12 years, with incidence rates that can exceed 1000 cases per 100 000 population. From 1928 to 2018, Nigeria recorded the highest number (21%) of cases in the region. The reactive vaccination strategy, a protocol with major drawbacks, has been the vaccination method utilised in Nigeria.

Aim: This review highlights the need for governments within the African meningitis belt to start preparations against the next explosive CSM epidemic expected to occur between 2024 and 2028 using the preventive vaccination strategy.

Methods: We performed a literature search on the Google Scholar search engine using relevant search strings and included studies and reports between 1905 and 2022 that met set criteria.

Results: Neisseria meningitidis serogroups A, B, C, W135, X, and Y; Haemophilus influenzae serotypes a, b, c, e, and f; and Streptococcus pneumoniae serotypes 1, 4, 5, 6, 9, 19, 19F, and 20 were implicated as aetiologies. However, the reactive vaccination strategy was only used against N. meningitidis A or C, H. influenzae b, and pneumococcal conjugate vaccine. Between 2011 and 2017, a polysaccharide vaccine (ACW or ACYW) active against serogroups A, C, W and Y was used within the African meningitis belt for the first time. Varying genotypes of N. meningitidis, H. influenzae and S. pneumoniae were identified.

Conclusion: Our results revealed a very high success rate for the preventive vaccination strategy.

What this study adds: In order to ensure reductions in the morbidity and mortality associated with invasive CSM, the Federal Ministry of Health, Nigeria, should leverage existing knowledge of the circulating serogroups, serotypes, and genotypes of the primary bacterial aetiologies and commence the implementation of the preventive vaccination strategy.

背景:在非洲脑膜炎带,每年爆发的脑脊髓膜炎(CSM)发病率为每10万人口10-100例,通常每8-12年发生一次爆炸性流行,发病率可超过每10万人口1000例。从1928年到2018年,尼日利亚在该地区的病例数最高(21%)。反应性疫苗接种战略是尼日利亚使用的疫苗接种方法,这是一种存在重大缺陷的方案。目的:本综述强调非洲脑膜炎带各国政府需要开始利用预防性疫苗接种战略,为预计在2024年至2028年之间发生的下一次爆炸性脊髓炎流行做准备。方法:我们使用相关搜索字符串在Google Scholar搜索引擎上进行文献检索,并纳入1905年至2022年间符合设定标准的研究和报告。结果:脑膜炎奈瑟菌血清A、B、C、W135、X、Y组;流感嗜血杆菌血清型a、b、c、e和f;肺炎链球菌血清型1、4、5、6、9、19、19F和20被认为是病因。然而,反应性疫苗接种策略仅用于脑膜炎奈瑟菌A或C、流感奈瑟菌b和肺炎球菌结合疫苗。2011年至2017年期间,首次在非洲脑膜炎带使用了一种针对a、C、W和Y血清群具有活性的多糖疫苗(ACW或ACYW)。鉴定出不同基因型的脑膜炎奈瑟菌、流感奈瑟菌和肺炎奈瑟菌。结论:我们的结果显示,预防接种策略的成功率非常高。本研究补充的内容:为了确保降低与侵袭性脊髓炎相关的发病率和死亡率,尼日利亚联邦卫生部应利用现有的关于主要细菌病原学的流行血清群、血清型和基因型的知识,并开始实施预防性疫苗接种战略。
{"title":"Epidemic forecast and preparedness for explosive-cerebrospinal meningitis outbreak in Nigeria using the preventive vaccination strategy.","authors":"Iseimokumo C Peletiri, Rosemary C Nwachukwu, Diweni C Peletiri, Esther Q Onoja, Charity T Tulagha, Ikaprite I Igbalibo, Grace M Ayanbimpe, Eugene I Ikeh","doi":"10.4102/ajlm.v12i1.2086","DOIUrl":"10.4102/ajlm.v12i1.2086","url":null,"abstract":"<p><strong>Background: </strong>Within the African meningitis belt, yearly outbreaks of cerebrospinal meningitis (CSM), with incidence rates of 10-100 cases per 100 000 population, are typically punctuated by explosive epidemics occurring every 8-12 years, with incidence rates that can exceed 1000 cases per 100 000 population. From 1928 to 2018, Nigeria recorded the highest number (21%) of cases in the region. The reactive vaccination strategy, a protocol with major drawbacks, has been the vaccination method utilised in Nigeria.</p><p><strong>Aim: </strong>This review highlights the need for governments within the African meningitis belt to start preparations against the next explosive CSM epidemic expected to occur between 2024 and 2028 using the preventive vaccination strategy.</p><p><strong>Methods: </strong>We performed a literature search on the Google Scholar search engine using relevant search strings and included studies and reports between 1905 and 2022 that met set criteria.</p><p><strong>Results: </strong><i>Neisseria meningitidis</i> serogroups A, B, C, W135, X, and Y; <i>Haemophilus influenzae</i> serotypes a, b, c, e, and f; and <i>Streptococcus pneumoniae</i> serotypes 1, 4, 5, 6, 9, 19, 19F, and 20 were implicated as aetiologies. However, the reactive vaccination strategy was only used against <i>N. meningitidis</i> A or C, <i>H. influenzae</i> b, and pneumococcal conjugate vaccine. Between 2011 and 2017, a polysaccharide vaccine (ACW or ACYW) active against serogroups A, C, W and Y was used within the African meningitis belt for the first time. Varying genotypes of <i>N. meningitidis, H. influenzae and S. pneumoniae</i> were identified.</p><p><strong>Conclusion: </strong>Our results revealed a very high success rate for the preventive vaccination strategy.</p><p><strong>What this study adds: </strong>In order to ensure reductions in the morbidity and mortality associated with invasive CSM, the Federal Ministry of Health, Nigeria, should leverage existing knowledge of the circulating serogroups, serotypes, and genotypes of the primary bacterial aetiologies and commence the implementation of the preventive vaccination strategy.</p>","PeriodicalId":45412,"journal":{"name":"African Journal of Laboratory Medicine","volume":"12 1","pages":"2086"},"PeriodicalIF":1.1,"publicationDate":"2023-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10696563/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138499738","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Storage of Mycobacterium tuberculosis culture isolates in MicrobankTM beads at a South African laboratory 在南非实验室MicrobankTM珠中储存结核分枝杆菌培养分离物
Q4 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-10-25 DOI: 10.4102/ajlm.v12i1.2172
Anura David, Lesley E. Scott, Pedro Da Silva, Elizabeth Mayne, Wendy S. Stevens
Background: Mycobacterium tuberculosis complex (MTBC) isolates are typically stored at −70 °C in cryovials containing 1 mL aliquots of a liquid medium, with or without 50% glycerol. Multiple uses of the culture stock may decrease the strain viability while increasing the risk of culture contamination. Small culture aliquots may be more practical; however, storage capacity remains challenging. MicrobankTM beads (25 beads/vial) for the long-term storage of fungal cultures is well documented, but their use for storing MTBC isolates is uninvestigated.Objective: The study aimed to determine the feasibility of using MicrobankTM beads for long-term storage of MTBC isolates at a laboratory in South Africa.Methods: In February 2020, 20 isolates in liquid culture were stored in MicrobankTM beads, following an in-house developed protocol, at −70 °C. At defined time points (16 months [15 June 2021] and 21 months [18 November 2021]), two beads were retrieved from each storage vial and assessed for viability and level of contamination.Results: Stored liquid isolates demonstrated MTBC growth within an average time-to-detection of 18 days following retrieval, even at 21 months post storage. Contaminating organisms were detected in 2 of 80 (2.5%) culture isolates.Conclusion: MicrobankTM beads will allow for the reculture of up to 25 culture isolates using a reduced culture volume compared to current storage methods. MicrobankTM beads represent a storage solution for the medium-term storage of MTBC isolates.What this study adds: This study evaluated the use of MicrobankTM beads as an alternate method for storing MTBC culture isolates at −70 °C and provided a suitable option for medium-term storage of MTBC.
背景:结核分枝杆菌复合体(MTBC)分离株通常在- 70°C下保存在含有1ml等分液体培养基(含或不含50%甘油)的低温瓶中。菌种的多次使用可能会降低菌种的生存能力,同时增加菌种污染的风险。小的文化等价物可能更实际;然而,存储容量仍然具有挑战性。用于长期储存真菌培养物的microbank™珠(25珠/瓶)已得到充分记录,但用于储存MTBC分离物的用途尚未得到调查。目的:本研究旨在确定在南非的一个实验室使用MicrobankTM微球长期保存MTBC分离株的可行性。方法:2020年2月,20株液体培养的分离株按照公司开发的方案,在- 70°C下保存在microbank™珠中。在规定的时间点(16个月[2021年6月15日]和21个月[2021年11月18日]),从每个储存瓶中取出两颗微球,并评估其活力和污染水平。结果:储存的液体分离株在提取后18天的平均检测时间内显示MTBC生长,即使在储存后21个月。80株培养分离物中有2株(2.5%)检出污染菌。结论:与目前的储存方法相比,MicrobankTM珠可以使用更小的培养体积进行多达25个培养分离物的再培养。MicrobankTM微珠是MTBC分离株中期储存的一种储存方案。本研究评估了MicrobankTM微球作为在- 70°C下储存MTBC培养分离物的替代方法的使用,并为MTBC的中期储存提供了合适的选择。
{"title":"Storage of Mycobacterium tuberculosis culture isolates in MicrobankTM beads at a South African laboratory","authors":"Anura David, Lesley E. Scott, Pedro Da Silva, Elizabeth Mayne, Wendy S. Stevens","doi":"10.4102/ajlm.v12i1.2172","DOIUrl":"https://doi.org/10.4102/ajlm.v12i1.2172","url":null,"abstract":"Background: Mycobacterium tuberculosis complex (MTBC) isolates are typically stored at −70 °C in cryovials containing 1 mL aliquots of a liquid medium, with or without 50% glycerol. Multiple uses of the culture stock may decrease the strain viability while increasing the risk of culture contamination. Small culture aliquots may be more practical; however, storage capacity remains challenging. MicrobankTM beads (25 beads/vial) for the long-term storage of fungal cultures is well documented, but their use for storing MTBC isolates is uninvestigated.Objective: The study aimed to determine the feasibility of using MicrobankTM beads for long-term storage of MTBC isolates at a laboratory in South Africa.Methods: In February 2020, 20 isolates in liquid culture were stored in MicrobankTM beads, following an in-house developed protocol, at −70 °C. At defined time points (16 months [15 June 2021] and 21 months [18 November 2021]), two beads were retrieved from each storage vial and assessed for viability and level of contamination.Results: Stored liquid isolates demonstrated MTBC growth within an average time-to-detection of 18 days following retrieval, even at 21 months post storage. Contaminating organisms were detected in 2 of 80 (2.5%) culture isolates.Conclusion: MicrobankTM beads will allow for the reculture of up to 25 culture isolates using a reduced culture volume compared to current storage methods. MicrobankTM beads represent a storage solution for the medium-term storage of MTBC isolates.What this study adds: This study evaluated the use of MicrobankTM beads as an alternate method for storing MTBC culture isolates at −70 °C and provided a suitable option for medium-term storage of MTBC.","PeriodicalId":45412,"journal":{"name":"African Journal of Laboratory Medicine","volume":"37 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135219264","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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African Journal of Laboratory Medicine
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