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Urinary coproporphyrins as a diagnostic biomarker of Dubin-Johnson syndrome in neonates: A diagnostic pathway is proposed. 尿比例卟啉作为新生儿杜宾-约翰逊综合征的诊断生物标志物:提出了一种诊断途径。
IF 2.7 4区 医学 Q3 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2023-05-01 DOI: 10.4103/sjg.sjg_480_22
Abdulrahman Al-Hussaini, Ali Asery, Omar Alharbi

Background: Dubin-Johnson syndrome (DJS) presents during the neonatal period with a phenotype that overlaps with a broad list of causes of neonatal cholestasis (NC), which makes the identification of DJS challenging for clinicians. We conducted a case-controlled study to investigate the utility of urinary coproporphyrins (UCP) I% as a potential diagnostic biomarker.

Methods: We reviewed our database of 533 cases of NC and identified 28 neonates with disease-causing variants in ATP-binding cassette-subfamily C member 2 (ABCC2) gene "Cases" (Study period 2008-2019). Another 20 neonates with cholestasis due to non-DJS diagnoses were included as "controls." Both groups underwent UCP analysis to measure CP isomer I percentage (%).

Results: Serum alanine aminotransferase (ALT) levels were within the normal range in 26 patients (92%) and mildly elevated in 2 patients. ALT levels were significantly lower in neonates with DJS than in NC from other causes (P < 0.001). The use of normal serum ALT levels to predict DJS among neonates with cholestasis had a sensitivity of 93%, specificity 90%, positive predictive value (PPV) 34%, and negative predictive value (NPV) 99.5%. The median UCPI% was significantly higher in DJS patients [88%, interquartile range (IQR) 1-IQR3, 84.2%-92.7%] than in NC from other causes [67%, (IQR1-IQR3, 61%-71.5%; Confidence interval 0.18-0.28; P< 0.001)]. The use of UCPI% >80% to predict DJS had a sensitivity, specificity, PPV, and NPV of 100%.

Conclusion: Based on the results from our study, we propose sequencing of the ABCC2 gene in neonates with normal ALT, presence of cholestasis and UCP1% >80%.

背景:杜宾-约翰逊综合征(DJS)出现在新生儿时期,其表型与新生儿胆汁淤积症(NC)的广泛原因重叠,这使得DJS的识别对临床医生具有挑战性。我们进行了一项病例对照研究,以调查尿比例卟啉(UCP) I%作为潜在诊断生物标志物的效用。方法:我们回顾了533例NC的数据库,并确定了28例atp结合卡带- C亚家族成员2 (ABCC2)基因致病变异的新生儿(研究期间为2008-2019)。另外20名因非dj诊断而患有胆汁淤积症的新生儿被纳入“对照组”。两组均采用UCP分析测定CP异构体I百分比(%)。结果:26例(92%)患者血清谷丙转氨酶(ALT)水平在正常范围内,2例轻度升高。DJS新生儿的ALT水平明显低于其他原因的NC (P < 0.001)。使用正常血清ALT水平预测胆汁潴留新生儿dj的敏感性为93%,特异性为90%,阳性预测值(PPV)为34%,阴性预测值(NPV)为99.5%。DJS患者的中位UCPI%[88%,四分位数范围(IQR) 1-IQR3, 84.2%-92.7%]明显高于其他原因的NC [67%, (IQR1-IQR3, 61%-71.5%;置信区间0.18-0.28;P < 0.001)。使用UCPI% >80%预测dj的敏感性、特异性、PPV和NPV均为100%。结论:根据我们的研究结果,我们建议对ALT正常、存在胆汁淤积、UCP1% >80%的新生儿进行ABCC2基因测序。
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引用次数: 0
Peroral endoscopic myotomy (POEM) for achalasia in the Middle East: The type of myotomy matters. 经口内窥镜肌切开术(POEM)治疗中东贲门失弛缓症:肌切开术的类型很重要。
IF 2.7 4区 医学 Q3 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2023-05-01 DOI: 10.4103/sjg.sjg_167_23
Bahtiyar Muhammedoğlu
Sir, Achalasia is a rare disease, that negatively affects human life with progressive dysphagia.[1] The Chicago Classification and the introduction of the peroral endoscopic myotomy (POEM) procedure (PP) into clinical practice revolutionized the treatment of achalasia.[2] The main goal of current therapeutic modalities is to reduce lower esophageal sphincter (LES) pressure.[3] Recently, Al Lehibi et al. examined 67 patients with achalasia where 95.5% achieved Eckardt scores of ≤3 at ≥3 months after the procedure.[3] It is important to determine myotomy according to the achalasia type, but as the authors stated, 10 cm in types I–II and 12 cm in type III may not be sufficient. It should be noted that in another study, good results were obtained when performing a myotomy with an average of 14.4 cm.[4] Similarly, long myotomy in the PP in patients with type III achalasia (16 vs 8 cm) is associated with better clinical outcomes.[5] The length of myotomy distal to the gastroesophageal junction (GEJ) is important in achalasia. Adequate gastric myotomy has been shown to prevent recurrent dysphagia in achalasia cases. Traditionally, the length of gastric myotomy varies from 2 to 3 cm.[6] İn the study by Al Lehibi et al, we believe that the myotomy was short, which is performed up to 2 cm distal to the GEJ. The authors did not specify what type of myotomy they performed in their study, but several randomized trials and systematic reviews have confirmed that the orientation of myotomy (anterior or posterior), has no substantial impact on the outcomes of POEM.[6] However, Al Lehibi et al. did not state whether selective circular myotomy or full‐thickness myotomy was performed in their study. In addition, the rate of pneumoperitoneum was relatively high (32.8%) during PP, which may be related to the general anesthesia‐related positive pressure ventilation utilized to prevent adverse events of CO2. Sometimes, it is necessary to pause the POEM for a while to prevent CO2 from leaking into the various tissue planes.[7] Generally, air leaks resolve spontaneously and a chest tube should be inserted when severe pneumothorax develops. In essence, POEM is a safe procedure for the treatment of achalasia. Myotomy length should be determined according to achalasia type and distal segment involvement. It may require redo POEM in the case of recurrent disease or esophagectomy in the case of the sigmoid esophagus.
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引用次数: 0
The Saudi Gastroenterology Association guidelines for quality indicators in gastrointestinal endoscopic procedures. 沙特胃肠病学协会胃肠内镜手术质量指标指南。
IF 2.7 4区 医学 Q3 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2023-05-01 DOI: 10.4103/sjg.sjg_391_22
Fahad Alsohaibani, Hesham Aljohany, Abdul Hakim Almakadma, Ahmed Hamed, Resheed Alkhiari, Emad Aljahdli, Majid Almadi

The quality and safety of gastrointestinal endoscopy varies considerably across regions and facilities worldwide. In this field, quality management has traditionally focused on individual performance of endoscopists, with most indicators addressing process measures and limited evidence of improvement in health outcomes. Indicators of quality can be classified according to their nature and sequence. The various professional societies and organizations have proposed many systems of indicators, but a universal system is necessary so that healthcare professionals are not overburdened and confused with a variety of quality improvement approaches. In this paper, we propose guidelines by the Saudi Gastroenterology Association pertaining to quality in endoscopic procedures aiming to improve the awareness of endoscopy unit staff toward important quality indications to enhance and standardize quality of care provided to our patients.

胃肠道内窥镜检查的质量和安全性在世界各地不同地区和设施差异很大。在这一领域,质量管理传统上侧重于内窥镜医师的个人表现,大多数指标涉及过程措施,健康结果改善的证据有限。质量指标可以按其性质和顺序进行分类。各种专业协会和组织提出了许多指标体系,但一个通用的系统是必要的,这样医疗保健专业人员就不会负担过重,并与各种质量改进方法混淆。在本文中,我们提出了沙特胃肠病学协会关于内窥镜检查质量的指导方针,旨在提高内窥镜检查单位工作人员对重要质量指征的认识,以提高和规范为患者提供的护理质量。
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引用次数: 1
Incidence and clinical characteristics of pediatric inflammatory bowel disease in Oman. 阿曼儿童炎症性肠病的发病率和临床特点
IF 2.7 4区 医学 Q3 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2023-05-01 DOI: 10.4103/sjg.sjg_473_22
Tawfiq Taki Al Lawati, Yusriya Al Rawahi, Al Qasim Al Bahlani, Adawiya Al Jamei, Dafalla Ramatalla, Omar I Saadah

Background: Pediatric inflammatory bowel disease (PIBD) has been documented all over the world, and there is now a large body of clinical, pathological, and treatment knowledge and protocols in place in many countries. There is currently limited knowledge on the prevalence and pathology of PIBD in Omani population. The aim of this study is to report the incidence and clinical features of PIBD in Oman.

Methods: This was a retrospective, cross-sectional, multicenter study carried out on all children <13 years of age between January 1, 2010 and December 31, 2021.

Results: Fifty-one children were identified, 22 males (43.1%) and 29 females (56.9%), who were mostly from the Muscat region of Oman. The median incidence in the country was 0.57 (confidence interval [CI]: 0.31-0.64) per 105 children for inflammatory bowel disease (IBD), 0.18 (CI: 0.07-0.38) per 105 children for ulcerative colitis (UC), and 0.19 (CI: 0.12-0.33) per 105 children for Crohn's disease (CD). There was a significant increase in the incidence of all PIBD types after the year 2015. Bloody diarrhea was the most common symptom, followed by abdominal pain. Perianal disease affected nine children (40.9%) with CD.

Conclusion: The incidence of PIBD in Oman is lower than in some neighboring Gulf countries but similar to that of Saudi Arabia. An alarming upward trend was noted from the year 2015. Large-scale population-based studies are required to investigate the possible causes of this increasing incidence.

背景:儿童炎症性肠病(PIBD)在世界各地都有文献记载,现在许多国家都有大量的临床、病理和治疗知识和方案。目前对阿曼人群中PIBD的患病率和病理了解有限。本研究的目的是报告阿曼PIBD的发病率和临床特征。方法:这是一项对所有儿童进行的回顾性、横断面、多中心研究。结果:确定了51名儿童,其中22名男性(43.1%),29名女性(56.9%),主要来自阿曼马斯喀特地区。该国的中位发病率为每105名炎症性肠病(IBD)儿童0.57例(可信区间[CI]: 0.31-0.64),每105名溃疡性结肠炎(UC)儿童0.18例(CI: 0.07-0.38),每105名克罗恩病(CD)儿童0.19例(CI: 0.12-0.33)。2015年后,所有PIBD类型的发病率均有显著增加。最常见的症状是带血腹泻,其次是腹痛。结论:阿曼的PIBD发病率低于邻近的一些海湾国家,但与沙特阿拉伯相似。从2015年开始出现了令人担忧的上升趋势。需要大规模的基于人群的研究来调查这种发病率增加的可能原因。
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引用次数: 0
Exploring treatment of inflammatory bowel disease with infliximab in the Middle East and Northern Africa: An analysis of the HARIR observational cohort study. 探索英夫利昔单抗在中东和北非治疗炎症性肠病:HARIR观察性队列研究分析
IF 2.7 4区 医学 Q3 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2023-05-01 DOI: 10.4103/sjg.sjg_434_22
Othman Alharbi, Waleed Hamed, Osama Salem, Catherine Taylor, Ahmed Besar, Mohamed Sharaf

Background: In 2017, inflammatory bowel disease, including Crohn's disease (CD) and ulcerative colitis (UC) affected more than 6.8 million people worldwide, with increased incidence in newly industrialized countries. Although treatment options were previously limited to symptom reduction, current approaches benefit from disease-modifying biologics. In this study, we aimed to explore disease characteristics, treatment, and outcomes of patients with CD or UC treated with infliximab or golimumab in routine clinical practice in the Middle East and Northern Africa.

Methods: HARIR was a prospective, observational, multicenter study (NCT03006198), in patients who were treatment naïve or who received two or fewer biologic agents. Observed data from routine clinical practice were presented descriptively.

Results: Data from 86 patients enrolled from five countries (Algeria, Egypt, Kuwait, Qatar, and Saudi Arabia) were analyzed, 62 with CD and 24 with UC. All patients received infliximab. Clinically meaningful efficacy data were observed only for the CD group (up to Month 3) due to limited patient numbers. Crohn's Disease Activity Index (CDAI) scores at Month 3 indicated a positive response to treatment (reduced score of ≥70 and ≥25% compared with baseline) for 14/48 (29.2%) patients; notably, 28/52 (53.8%) patients had CDAI score <150 at baseline. Rates of serious and severe adverse events (AEs) were low in both groups. The most common AEs were gastrointestinal disorders.

Conclusion: Infliximab treatment was well tolerated in this Middle Eastern and Northern African population, and a clinical response was observed for 29.2% of CD patients. Limited accessibility to biologics and concomitant treatments restricted study conduct.

背景:2017年,包括克罗恩病(CD)和溃疡性结肠炎(UC)在内的炎症性肠病影响了全球超过680万人,新兴工业化国家的发病率有所增加。虽然治疗方案以前仅限于减轻症状,但目前的方法受益于疾病修饰生物制剂。在这项研究中,我们的目的是探讨在中东和北非常规临床实践中使用英夫利昔单抗或戈利姆单抗治疗CD或UC患者的疾病特征、治疗和结局。方法:HARIR是一项前瞻性、观察性、多中心研究(NCT03006198),研究对象为接受naïve治疗或接受两种或更少生物制剂治疗的患者。对常规临床实践的观察数据进行描述性描述。结果:我们分析了来自5个国家(阿尔及利亚、埃及、科威特、卡塔尔和沙特阿拉伯)的86例患者的数据,其中62例为CD, 24例为UC。所有患者均接受英夫利昔单抗治疗。由于患者数量有限,仅在CD组(截至第3个月)观察到有临床意义的疗效数据。第3个月时克罗恩病活动度指数(CDAI)评分显示14/48(29.2%)患者对治疗有积极反应(与基线相比评分降低≥70和≥25%);值得注意的是,28/52(53.8%)患者有CDAI评分。结论:英夫利昔单抗在中东和北非人群中耐受良好,29.2%的CD患者有临床反应。生物制剂和伴随治疗的可及性限制了研究的开展。
{"title":"Exploring treatment of inflammatory bowel disease with infliximab in the Middle East and Northern Africa: An analysis of the HARIR observational cohort study.","authors":"Othman Alharbi,&nbsp;Waleed Hamed,&nbsp;Osama Salem,&nbsp;Catherine Taylor,&nbsp;Ahmed Besar,&nbsp;Mohamed Sharaf","doi":"10.4103/sjg.sjg_434_22","DOIUrl":"https://doi.org/10.4103/sjg.sjg_434_22","url":null,"abstract":"<p><strong>Background: </strong>In 2017, inflammatory bowel disease, including Crohn's disease (CD) and ulcerative colitis (UC) affected more than 6.8 million people worldwide, with increased incidence in newly industrialized countries. Although treatment options were previously limited to symptom reduction, current approaches benefit from disease-modifying biologics. In this study, we aimed to explore disease characteristics, treatment, and outcomes of patients with CD or UC treated with infliximab or golimumab in routine clinical practice in the Middle East and Northern Africa.</p><p><strong>Methods: </strong>HARIR was a prospective, observational, multicenter study (NCT03006198), in patients who were treatment naïve or who received two or fewer biologic agents. Observed data from routine clinical practice were presented descriptively.</p><p><strong>Results: </strong>Data from 86 patients enrolled from five countries (Algeria, Egypt, Kuwait, Qatar, and Saudi Arabia) were analyzed, 62 with CD and 24 with UC. All patients received infliximab. Clinically meaningful efficacy data were observed only for the CD group (up to Month 3) due to limited patient numbers. Crohn's Disease Activity Index (CDAI) scores at Month 3 indicated a positive response to treatment (reduced score of ≥70 and ≥25% compared with baseline) for 14/48 (29.2%) patients; notably, 28/52 (53.8%) patients had CDAI score <150 at baseline. Rates of serious and severe adverse events (AEs) were low in both groups. The most common AEs were gastrointestinal disorders.</p><p><strong>Conclusion: </strong>Infliximab treatment was well tolerated in this Middle Eastern and Northern African population, and a clinical response was observed for 29.2% of CD patients. Limited accessibility to biologics and concomitant treatments restricted study conduct.</p>","PeriodicalId":48881,"journal":{"name":"Saudi Journal of Gastroenterology","volume":"29 3","pages":"164-170"},"PeriodicalIF":2.7,"publicationDate":"2023-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/0d/8e/SJG-29-164.PMC10358795.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10206731","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The impact of preoperative total parenteral nutrition on the surgical complications of Crohn's disease: A retrospective cohort study. 术前全肠外营养对克罗恩病手术并发症的影响:一项回顾性队列研究
IF 2.7 4区 医学 Q3 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2023-05-01 DOI: 10.4103/sjg.sjg_425_22
Thamer A Bin Traiki, Sulaiman A Alshammari, Nadia A Aljomah, Monirah M Alsalouli, Esraa S Altawil, Maha-Hamadien Abdulla, Noura S Alhassan, Khayal A Alkhayal

Background: Crohn's disease (CD) is associated with malnutrition, an independent risk factor for surgical morbidity and mortality in more than 65% of patients, with a significant impact on disease outcomes. In this single-center retrospective cohort study, we aimed to investigate the impact of total parenteral nutrition (TPN) on the surgical outcomes of patients with CD.

Methods: This study included patients with CD who underwent abdominal surgery. We compared patients who received preoperative total parenteral nutrition (TPN group) to those who did not (non-TPN group). Prolonged oral intolerance, albumin level <30 g/L, and body mass index <18.5 were the main indications for TPN. We evaluated postoperative surgical complications in both groups.

Results: Between January 2010 and October 2018, 169 eligible patients underwent abdominal surgery. The TPN and non-TPN groups included 40 and 129 patients, respectively. The mean albumin level was significantly lower in the TPN group (P = 0.013). Laparoscopic surgery was performed in 76.9% of the patients, with a conversion rate of 11.6%. Infectious and non-infectious complications developed in 8.9% and 16% of patients, respectively. Surgical complications were comparable between the groups (P >0.05).

Conclusions: Despite oral intake intolerance and severe disease in the TPN group, the surgical complications were comparable between the groups.

背景:克罗恩病(CD)与营养不良有关,是65%以上患者手术发病率和死亡率的独立危险因素,对疾病结局有显著影响。在这项单中心回顾性队列研究中,我们旨在探讨全肠外营养(TPN)对CD患者手术结果的影响。方法:本研究纳入了接受腹部手术的CD患者。我们比较术前接受全肠外营养(TPN组)和未接受全肠外营养(非TPN组)的患者。结果:2010年1月至2018年10月,169例符合条件的患者接受了腹部手术。TPN组和非TPN组分别为40例和129例。TPN组平均白蛋白水平显著低于对照组(P = 0.013)。76.9%的患者行腹腔镜手术,转换率为11.6%。感染性和非感染性并发症发生率分别为8.9%和16%。两组手术并发症比较,差异有统计学意义(P >0.05)。结论:尽管TPN组存在口服摄入不耐受和严重疾病,但两组之间的手术并发症具有可比性。
{"title":"The impact of preoperative total parenteral nutrition on the surgical complications of Crohn's disease: A retrospective cohort study.","authors":"Thamer A Bin Traiki,&nbsp;Sulaiman A Alshammari,&nbsp;Nadia A Aljomah,&nbsp;Monirah M Alsalouli,&nbsp;Esraa S Altawil,&nbsp;Maha-Hamadien Abdulla,&nbsp;Noura S Alhassan,&nbsp;Khayal A Alkhayal","doi":"10.4103/sjg.sjg_425_22","DOIUrl":"https://doi.org/10.4103/sjg.sjg_425_22","url":null,"abstract":"<p><strong>Background: </strong>Crohn's disease (CD) is associated with malnutrition, an independent risk factor for surgical morbidity and mortality in more than 65% of patients, with a significant impact on disease outcomes. In this single-center retrospective cohort study, we aimed to investigate the impact of total parenteral nutrition (TPN) on the surgical outcomes of patients with CD.</p><p><strong>Methods: </strong>This study included patients with CD who underwent abdominal surgery. We compared patients who received preoperative total parenteral nutrition (TPN group) to those who did not (non-TPN group). Prolonged oral intolerance, albumin level <30 g/L, and body mass index <18.5 were the main indications for TPN. We evaluated postoperative surgical complications in both groups.</p><p><strong>Results: </strong>Between January 2010 and October 2018, 169 eligible patients underwent abdominal surgery. The TPN and non-TPN groups included 40 and 129 patients, respectively. The mean albumin level was significantly lower in the TPN group (P = 0.013). Laparoscopic surgery was performed in 76.9% of the patients, with a conversion rate of 11.6%. Infectious and non-infectious complications developed in 8.9% and 16% of patients, respectively. Surgical complications were comparable between the groups (P >0.05).</p><p><strong>Conclusions: </strong>Despite oral intake intolerance and severe disease in the TPN group, the surgical complications were comparable between the groups.</p>","PeriodicalId":48881,"journal":{"name":"Saudi Journal of Gastroenterology","volume":"29 3","pages":"158-163"},"PeriodicalIF":2.7,"publicationDate":"2023-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/d8/22/SJG-29-158.PMC10358801.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9845181","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Let food be thy medicine…. 让食物成为你的良药....
IF 2.7 4区 医学 Q3 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2023-05-01 DOI: 10.4103/sjg.sjg_180_23
Htar Htar Hlaing, Lisa Mary Sharkey
Although Hippocrates probably never stated the exact words that are often attributed to him (let food be thy medicine, and medicine be thy food), he did consider nutrition as an integral part of a doctor’s armamentarium. Perioperative nutrition support should be at the forefront of every surgeon’s mind, especially as many conditions requiring surgery are naturally associated with a catabolic state and a high risk of nutritional deficiencies, including inflammatory bowel disease (IBD). There have been significant advances in the medical management of IBD over the past 20 years; however, many patients with Crohn’s disease (CD) still require surgery. The prevalence of malnutrition has been reported as high as 82.8% in patients with active CD[1] and that of sarcopenia to be up to 70%,[2] and these are associated with increased frequency and severity of postoperative complications.[3]
{"title":"Let food be thy medicine….","authors":"Htar Htar Hlaing,&nbsp;Lisa Mary Sharkey","doi":"10.4103/sjg.sjg_180_23","DOIUrl":"https://doi.org/10.4103/sjg.sjg_180_23","url":null,"abstract":"Although Hippocrates probably never stated the exact words that are often attributed to him (let food be thy medicine, and medicine be thy food), he did consider nutrition as an integral part of a doctor’s armamentarium. Perioperative nutrition support should be at the forefront of every surgeon’s mind, especially as many conditions requiring surgery are naturally associated with a catabolic state and a high risk of nutritional deficiencies, including inflammatory bowel disease (IBD). There have been significant advances in the medical management of IBD over the past 20 years; however, many patients with Crohn’s disease (CD) still require surgery. The prevalence of malnutrition has been reported as high as 82.8% in patients with active CD[1] and that of sarcopenia to be up to 70%,[2] and these are associated with increased frequency and severity of postoperative complications.[3]","PeriodicalId":48881,"journal":{"name":"Saudi Journal of Gastroenterology","volume":"29 3","pages":"145-147"},"PeriodicalIF":2.7,"publicationDate":"2023-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/33/ee/SJG-29-145.PMC10358794.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9839174","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Gut virome profile in healthy Saudi children. 健康沙特儿童肠道病毒谱
IF 2.7 4区 医学 Q3 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2023-05-01 DOI: 10.4103/sjg.sjg_444_22
Mohammad I El Mouzan, Asaad A Assiri, Ahmed A Al Sarkhy, Mona M Alasmi

Background: The role of viruses is well known in health and disease. The aim of this report was to describe the profile of viruses in the gut of healthy Saudi children.

Methods: In 20 randomly selected school age children from Riyadh, stool samples were collected in cryovials and stored at -80° C. At the time of analysis, the samples were sent by express mail in a temperature-controlled container to the laboratory in the USA, Viral DNA was isolated and shotgun metagenomic sequencing was performed. The abundance of each organism was expressed as an average relative percentage across the viral phylogenetic tree from phyla to species.

Results: The median age of the children was 11.3 (range 6.8-15.4) years, and 35% were males. Caudovirales were the most abundant bacteriophage order (77%) and Siphoviridae, Myoviridae, and Podoviridae families predominated, accounting for 41%, 25%, and 11%, respectively. Among the viral bacteriophage species, the most abundant were the Enterobacteria phages.

Conclusion: The profile and abundance of the gut virome in healthy Saudi children reveal important differences from the literature. Further studies from different populations with larger sample sizes are needed to understand the role of gut viruses in the pathogenesis of disease in general and in the response to fecal microbiota therapy in particular.

背景:病毒在健康和疾病中的作用是众所周知的。本报告的目的是描述健康沙特儿童肠道中的病毒概况。方法:随机选择20名来自利雅得的学龄儿童,将粪便样本放入低温冷冻瓶中,-80℃保存。分析时,将样本放入温控容器中,通过快递邮寄至美国实验室,分离病毒DNA并进行鸟枪元基因组测序。每个生物体的丰度表示为从门到种的病毒系统发育树的平均相对百分比。结果:患儿中位年龄11.3岁(范围6.8 ~ 15.4岁),男性占35%。尾状病毒科是噬菌体数量最多的目(77%),而Siphoviridae、Myoviridae和Podoviridae分别占41%、25%和11%。在病毒噬菌体种类中,以肠杆菌噬菌体数量最多。结论:健康的沙特儿童肠道病毒的特征和丰度与文献显示了重要的差异。需要对不同人群进行更大样本量的进一步研究,以了解肠道病毒在一般疾病发病机制中的作用,特别是在对粪便微生物群治疗的反应中。
{"title":"Gut virome profile in healthy Saudi children.","authors":"Mohammad I El Mouzan,&nbsp;Asaad A Assiri,&nbsp;Ahmed A Al Sarkhy,&nbsp;Mona M Alasmi","doi":"10.4103/sjg.sjg_444_22","DOIUrl":"https://doi.org/10.4103/sjg.sjg_444_22","url":null,"abstract":"<p><strong>Background: </strong>The role of viruses is well known in health and disease. The aim of this report was to describe the profile of viruses in the gut of healthy Saudi children.</p><p><strong>Methods: </strong>In 20 randomly selected school age children from Riyadh, stool samples were collected in cryovials and stored at -80° C. At the time of analysis, the samples were sent by express mail in a temperature-controlled container to the laboratory in the USA, Viral DNA was isolated and shotgun metagenomic sequencing was performed. The abundance of each organism was expressed as an average relative percentage across the viral phylogenetic tree from phyla to species.</p><p><strong>Results: </strong>The median age of the children was 11.3 (range 6.8-15.4) years, and 35% were males. Caudovirales were the most abundant bacteriophage order (77%) and Siphoviridae, Myoviridae, and Podoviridae families predominated, accounting for 41%, 25%, and 11%, respectively. Among the viral bacteriophage species, the most abundant were the Enterobacteria phages.</p><p><strong>Conclusion: </strong>The profile and abundance of the gut virome in healthy Saudi children reveal important differences from the literature. Further studies from different populations with larger sample sizes are needed to understand the role of gut viruses in the pathogenesis of disease in general and in the response to fecal microbiota therapy in particular.</p>","PeriodicalId":48881,"journal":{"name":"Saudi Journal of Gastroenterology","volume":"29 3","pages":"171-176"},"PeriodicalIF":2.7,"publicationDate":"2023-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/39/e5/SJG-29-171.PMC10358797.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10206728","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Combining serum uric acid and fatty liver index to improve prediction quality of nonalcoholic fatty liver disease. 结合血清尿酸和脂肪肝指数提高非酒精性脂肪肝的预测质量。
IF 2.7 4区 医学 Q3 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2023-05-01 DOI: 10.4103/sjg.sjg_484_22
Yajie Ding, Zongzhe Tang, Minxian Wang, Min Wang, Ru Zhang, Liuxin Zhang, Mengting Zhang, Qing Guan, Jie Wang

Background: The significant association between serum uric acid (SUA) and nonalcoholic fatty liver disease (NAFLD) is well documented. In this report, we tested the hypothesis that SUA might improve the widely studied fatty liver index (FLI) to predict NAFLD.

Methods: A cross-sectional study was performed in a community of Nanjing, China. The population data on sociodemographics, physical examinations, and biochemical tests were collected from July to September 2018. The associations of SUA and FLI with NAFLD were analyzed using linear correlation, multiple linear regressions, binary logistic analyses, and area under receiver-operating characteristic curve (AUROC).

Results: A total of 3,499 people were included in this study, of which 36.9% had NAFLD. The prevalence of NAFLD increased with the increase of SUA levels (all P <.05). Logistic regression analyses revealed that SUA was significantly associated with an increased risk of NAFLD (all P <.001). The NAFLD predictive value after combining SUA with FLI was superior to FLI, especially in females (AUROCSUA + FLI = 0.911 vs. AUROCFLI = 0.903, P <.05). The reclassification of NAFLD also significantly improved, based on net reclassification improvement (0.053, 95% confidence interval [CI]: 0.022-0.085, P <.001) and integrated discrimination improvement (0.096, 95% CI: 0.090-0.102, P <.001). A regression formula of this combined algorithm was proposed as: The novel formula = 0.032* waist circumference + 0.303* body mass index + 1.301* natural logarithm of triglyceride + 0.478* natural logarithm of glutamyl transpeptidase + 0.002* SUA- 18.823. At the cutoff value of 13.3, the sensitivity and specificity of this model were 89.2% and 78.4%, respectively.

Conclusions: SUA level was positively associated with NAFLD prevalence. A new formula combining SUA with FLI may serve as a better indicator to predict NAFLD compared to FLI, especially in females.

背景:血清尿酸(SUA)与非酒精性脂肪性肝病(NAFLD)之间的显著关联已被充分证实。在本报告中,我们验证了SUA可能改善被广泛研究的脂肪肝指数(FLI)以预测NAFLD的假设。方法:在中国南京的一个社区进行横断面研究。收集2018年7 - 9月的社会人口统计、体格检查和生化检测等人口数据。采用线性相关、多元线性回归、二元logistic分析和受试者工作特征曲线下面积(AUROC)分析SUA和FLI与NAFLD的相关性。结果:本研究共纳入3499人,其中36.9%的人患有NAFLD。随着SUA水平的升高,NAFLD患病率增加(所有P SUA + FLI = 0.911 vs. AUROCFLI = 0.903, P)。结论:SUA水平与NAFLD患病率呈正相关。与FLI相比,将SUA与FLI结合的新公式可能作为预测NAFLD的更好指标,特别是在女性中。
{"title":"Combining serum uric acid and fatty liver index to improve prediction quality of nonalcoholic fatty liver disease.","authors":"Yajie Ding,&nbsp;Zongzhe Tang,&nbsp;Minxian Wang,&nbsp;Min Wang,&nbsp;Ru Zhang,&nbsp;Liuxin Zhang,&nbsp;Mengting Zhang,&nbsp;Qing Guan,&nbsp;Jie Wang","doi":"10.4103/sjg.sjg_484_22","DOIUrl":"https://doi.org/10.4103/sjg.sjg_484_22","url":null,"abstract":"<p><strong>Background: </strong>The significant association between serum uric acid (SUA) and nonalcoholic fatty liver disease (NAFLD) is well documented. In this report, we tested the hypothesis that SUA might improve the widely studied fatty liver index (FLI) to predict NAFLD.</p><p><strong>Methods: </strong>A cross-sectional study was performed in a community of Nanjing, China. The population data on sociodemographics, physical examinations, and biochemical tests were collected from July to September 2018. The associations of SUA and FLI with NAFLD were analyzed using linear correlation, multiple linear regressions, binary logistic analyses, and area under receiver-operating characteristic curve (AUROC).</p><p><strong>Results: </strong>A total of 3,499 people were included in this study, of which 36.9% had NAFLD. The prevalence of NAFLD increased with the increase of SUA levels (all P <.05). Logistic regression analyses revealed that SUA was significantly associated with an increased risk of NAFLD (all P <.001). The NAFLD predictive value after combining SUA with FLI was superior to FLI, especially in females (AUROC<sub>SUA + FLI</sub> = 0.911 vs. AUROC<sub>FLI</sub> = 0.903, P <.05). The reclassification of NAFLD also significantly improved, based on net reclassification improvement (0.053, 95% confidence interval [CI]: 0.022-0.085, P <.001) and integrated discrimination improvement (0.096, 95% CI: 0.090-0.102, P <.001). A regression formula of this combined algorithm was proposed as: The novel formula = 0.032* waist circumference + 0.303* body mass index + 1.301* natural logarithm of triglyceride + 0.478* natural logarithm of glutamyl transpeptidase + 0.002* SUA- 18.823. At the cutoff value of 13.3, the sensitivity and specificity of this model were 89.2% and 78.4%, respectively.</p><p><strong>Conclusions: </strong>SUA level was positively associated with NAFLD prevalence. A new formula combining SUA with FLI may serve as a better indicator to predict NAFLD compared to FLI, especially in females.</p>","PeriodicalId":48881,"journal":{"name":"Saudi Journal of Gastroenterology","volume":"29 3","pages":"191-198"},"PeriodicalIF":2.7,"publicationDate":"2023-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/03/cc/SJG-29-191.PMC10358798.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9851075","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Predictors of biliary atresia outcome: Saudi National Study (2000 - 2018). 胆道闭锁结果的预测因素:沙特国家研究(2000-2018)。
IF 2.7 4区 医学 Q3 GASTROENTEROLOGY & HEPATOLOGY Pub Date : 2023-03-20 DOI: 10.4103/sjg.sjg_512_22
Mohammed Abanemai, Mohammed AlEdreesi, Ahmed Al Sarkhy, Omar I Saadah, Homoud Alhebbi, Razan Bader, Maher Alhatlani, Hana Halabi, Ahmed Aladsani, Sami Wali, Talal Alguofi, Fahad Alsayed, Amira NasserAllah, Ahmed Almehmadi, Afnan Qurban, Muhammed Salman Bashir, Aisha Alamri, Abdulrahman Al-Hussaini

Background: Outcomes in biliary atresia (BA) have been well-documented in large national cohorts from Europe, North America, and East Asia. Understanding the challenges that preclude success of the Kasai portoenterostomy (KPE) is the key to improve the overall outcomes of BA and implementing intervention strategies. Here, we analyzed the data from the Saudi national BA study (204 BA cases diagnosed between 2000 and 2018) to identify the prognostic factors of BA outcomes.

Methods: One hundred and forty-three cases underwent KPE. Several prognostic factors (center case load, congenital anomalies, serum gamma-glutamyl transferase, use of steroids, ascending cholangitis post-operatively, and degree of portal fibrosis at time of KPE) were investigated and correlated with the primary outcomes of interest: 1) success of KPE (clearance of jaundice and total serum bilirubin <20 mmol/l after KPE), 2) survival with native liver (SNL), and 3) overall survival.

Results: Use of steroids after KPE was associated with clearance of jaundice, 68% vs. 36.8% in the BA cases that did not receive steroids (P = 0.013; odds ratio 2.5) and a significantly better SNL rate at 2 - and 10-year of 62.22% and 57.77% vs. 39.47% and 31.57%, respectively (P = 0.01). A better 10-year SNL was observed in centers with caseload <1/year (group 1) as compared to centers that performed ≥1/year (group 2) [45.34% vs. 26.66%, respectively; P = 0.047]. On comparison of the 2 groups, cases in group 1 had KPE at significantly earlier age (median 59.5 vs. 75 days, P = 0.006) and received steroids after KPE more frequently than group 2 (69% vs. 31%, P < 0.001). None of the remaining prognostic variables were identified as being significantly related to BA outcome.

Conclusion: Steroids use post-KPE predicted clearance of jaundice and better short- and long-term SNL. There is a need to establish a national BA registry in Saudi Arabia aiming to standardize the pre- and post-operative clinical practices and facilitate clinical and basic research to evaluate factors that influence BA outcome.

背景:来自欧洲、北美和东亚的大型国家队列已经充分记录了胆道闭锁(BA)的结果。了解阻碍Kasai门肠造口术(KPE)成功的挑战是提高BA整体疗效和实施干预策略的关键。在这里,我们分析了沙特国家BA研究的数据(2000年至2018年间诊断的204例BA病例),以确定BA结果的预后因素。方法:对143例患者进行KPE检查。研究了几个预后因素(中心病例数、先天性异常、血清γ-谷氨酰转移酶、类固醇的使用、术后上行性胆管炎和KPE时门脉纤维化程度),并与主要关注结果相关:1)KPE的成功(黄疸清除率和血清总胆红素结果:在未接受类固醇治疗的BA病例中,KPE后使用类固醇与黄疸清除率相关,分别为68%和36.8%(P=0.013;比值比2.5),2年和10年的SNL率分别为62.22%和57.77%和39.47%和31.57%,在有病例量的中心观察到更好的10年SNL。结论:KPE后使用类固醇可以预测黄疸的清除率以及更好的短期和长期SNL。有必要在沙特阿拉伯建立一个国家BA注册中心,旨在规范术前和术后的临床实践,并促进临床和基础研究,以评估影响BA结果的因素。
{"title":"Predictors of biliary atresia outcome: Saudi National Study (2000 - 2018).","authors":"Mohammed Abanemai,&nbsp;Mohammed AlEdreesi,&nbsp;Ahmed Al Sarkhy,&nbsp;Omar I Saadah,&nbsp;Homoud Alhebbi,&nbsp;Razan Bader,&nbsp;Maher Alhatlani,&nbsp;Hana Halabi,&nbsp;Ahmed Aladsani,&nbsp;Sami Wali,&nbsp;Talal Alguofi,&nbsp;Fahad Alsayed,&nbsp;Amira NasserAllah,&nbsp;Ahmed Almehmadi,&nbsp;Afnan Qurban,&nbsp;Muhammed Salman Bashir,&nbsp;Aisha Alamri,&nbsp;Abdulrahman Al-Hussaini","doi":"10.4103/sjg.sjg_512_22","DOIUrl":"https://doi.org/10.4103/sjg.sjg_512_22","url":null,"abstract":"<p><strong>Background: </strong>Outcomes in biliary atresia (BA) have been well-documented in large national cohorts from Europe, North America, and East Asia. Understanding the challenges that preclude success of the Kasai portoenterostomy (KPE) is the key to improve the overall outcomes of BA and implementing intervention strategies. Here, we analyzed the data from the Saudi national BA study (204 BA cases diagnosed between 2000 and 2018) to identify the prognostic factors of BA outcomes.</p><p><strong>Methods: </strong>One hundred and forty-three cases underwent KPE. Several prognostic factors (center case load, congenital anomalies, serum gamma-glutamyl transferase, use of steroids, ascending cholangitis post-operatively, and degree of portal fibrosis at time of KPE) were investigated and correlated with the primary outcomes of interest: 1) success of KPE (clearance of jaundice and total serum bilirubin <20 mmol/l after KPE), 2) survival with native liver (SNL), and 3) overall survival.</p><p><strong>Results: </strong>Use of steroids after KPE was associated with clearance of jaundice, 68% vs. 36.8% in the BA cases that did not receive steroids (P = 0.013; odds ratio 2.5) and a significantly better SNL rate at 2 - and 10-year of 62.22% and 57.77% vs. 39.47% and 31.57%, respectively (P = 0.01). A better 10-year SNL was observed in centers with caseload <1/year (group 1) as compared to centers that performed ≥1/year (group 2) [45.34% vs. 26.66%, respectively; P = 0.047]. On comparison of the 2 groups, cases in group 1 had KPE at significantly earlier age (median 59.5 vs. 75 days, P = 0.006) and received steroids after KPE more frequently than group 2 (69% vs. 31%, P < 0.001). None of the remaining prognostic variables were identified as being significantly related to BA outcome.</p><p><strong>Conclusion: </strong>Steroids use post-KPE predicted clearance of jaundice and better short- and long-term SNL. There is a need to establish a national BA registry in Saudi Arabia aiming to standardize the pre- and post-operative clinical practices and facilitate clinical and basic research to evaluate factors that influence BA outcome.</p>","PeriodicalId":48881,"journal":{"name":"Saudi Journal of Gastroenterology","volume":" ","pages":""},"PeriodicalIF":2.7,"publicationDate":"2023-03-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41149543","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
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Saudi Journal of Gastroenterology
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