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Sleep and diurnal alternative polyadenylation sites associated with human APA-linked brain disorders 与人类 APA 相关脑部疾病有关的睡眠和昼夜替代多聚腺苷酸位点
Pub Date : 2024-11-01 DOI: 10.1038/s44323-024-00012-2
Carlos C. Flores, Nickolas A. Pasetto, Hongyang Wang, Alexander G. Dimitrov, Jon F. Davis, Zhihua Jiang, Christopher J. Davis, Jason R. Gerstner
Disruption of sleep and circadian rhythms are a comorbid feature of many pathologies, and can negatively influence many health conditions, including neurodegenerative disease, metabolic illness, cancer, and various neurological disorders. Genetic association studies linking sleep and circadian disturbances with disease susceptibility have mainly focused on changes in gene expression due to mutations, such as single-nucleotide polymorphisms. The interaction between sleep and/or circadian rhythms with the use of Alternative Polyadenylation (APA) has been largely undescribed, particularly in the context of other disorders. APA generates transcript isoforms by utilizing various polyadenylation sites (PASs) from the same gene affecting its mRNA translation, stability, localization, and subsequent function. Here we identified unique APAs expressed in rat brain over time-of-day, immediately following sleep deprivation, and the subsequent recovery period. From these data, we performed a secondary analysis of these sleep- or time-of-day associated PASs with recently described APA-linked human brain disorder susceptibility genes.
睡眠和昼夜节律紊乱是许多疾病的并发症,会对许多健康状况产生负面影响,包括神经退行性疾病、代谢性疾病、癌症和各种神经系统疾病。将睡眠和昼夜节律紊乱与疾病易感性联系起来的遗传关联研究主要集中于基因突变(如单核苷酸多态性)导致的基因表达变化。睡眠和/或昼夜节律与交替多腺苷酸化(APA)之间的相互作用在很大程度上尚未被描述,尤其是在其他疾病的背景下。APA 通过利用同一基因的不同多腺苷酸化位点(PAS)产生转录本异构体,从而影响其 mRNA 的翻译、稳定性、定位和后续功能。在这里,我们发现了大鼠大脑在不同时间段、睡眠剥夺后和随后的恢复期所表达的独特 APA。根据这些数据,我们对这些与睡眠或睡眠时间相关的 PAS 与最近描述的与 APA 相关的人类脑部疾病易感基因进行了二次分析。
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引用次数: 0
Bridging the gap: examining circadian biology and fatigue alongside work schedules 缩小差距:研究昼夜节律生物学和疲劳与工作时间表的关系
Pub Date : 2024-11-01 DOI: 10.1038/s44323-024-00011-3
Malena Mul Fedele, Leandro P. Casiraghi, Santiago A. Plano, Giannina Bellone, Diego A. Golombek, Daniel E. Vigo
We compared three different work schedules in a large oil company: 1) two days of 12 h of daytime shifts followed by two consecutive 12 h night shifts, followed by four work-free days (“2 x 2 x 4”), 2) four consecutive 12 h daytime shifts and four consecutive 12 h night shifts, flanked by four work-free days (“4 x 4 x 4”), 3) a non-rotating schedule involving continuous 12 h daytime shifts during 40 days (“fixed 12 h”). We measured wrist-actigraphy, peripheral temperature rhythms, and subjective self-reports regarding fatigue, somnolence, and psycho-affective features. Sleep duration on the resting period was significantly less than the recommended 7 h. The “2 x 2 x 4” schedule resulted in decreased sleep regularity and increased circadian disruption, higher levels of insomnia, increased fatigue impact, lower alertness levels, and heightened symptoms of depression associated with more nocturnal sleep time after diurnal work. Our findings indicate that health and safety vary depending on the type of schedule employed.
我们比较了一家大型石油公司的三种不同工作安排:1)两天 12 小时的白班,然后是连续两次 12 小时的夜班,接着是四天的无工作日("2 x 2 x 4");2)连续四次 12 小时的白班和连续四次 12 小时的夜班,中间是四天的无工作日("4 x 4 x 4");3)40 天内连续 12 小时白班的非轮换时间表("固定 12 小时")。我们测量了腕动仪、外周温度节律以及有关疲劳、嗜睡和心理情感特征的主观自我报告。2 x 2 x 4 "时间表导致睡眠规律性降低、昼夜节律紊乱加剧、失眠程度升高、疲劳影响增加、警觉性降低,以及与昼间工作后夜间睡眠时间增加有关的抑郁症状加剧。我们的研究结果表明,健康和安全因采用的时间表类型而异。
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引用次数: 0
Insomnia and its treatments—trend analysis and publication profile of randomized clinical trials 失眠症及其治疗方法--随机临床试验的趋势分析和出版概况
Pub Date : 2024-11-01 DOI: 10.1038/s44323-024-00014-0
Viviane Akemi Kakazu, Marcia Assis, Andrea Bacelar, Andréia Gomes Bezerra, Giovanna Lira Rosa Ciutti, Silvia Gonçalves Conway, José Carlos Fernandes Galduróz, Luciano F. Drager, Mariana Pery Khoury, Ingrid Porto Araújo Leite, Ygor de Matos Luciano, Dalva Poyares, Sergio Tufik, Gabriel Natan Pires
This study aimed to describe the publication profile of randomized controlled trials (RCTs) for insomnia. A systematic review of RCTs regarding interventions for non-comorbid insomnia in adults retrieved 132 RCTs: 58 related to pharmacological treatments, 71 to non-pharmacological treatments, and 3 to both interventions. The treatments with the biggest publication profile were digital CBT-I (dCBT-I) (n = 35), in-person CBT-I (n = 28) and zolpidem (n = 22). Regarding dCBT-I, the median publication year is 2019, with 1.13 ± 1.91 RCTs published per year. Regarding zolpidem, the median publication year is 2008, with 0.71 ± 0.97 RCTs per year. Regarding in-person CBT-I, the median publication year is 2018, with 0.90 ± 1.14 RCTs per year. The majority of the available RCTs are on non-pharmacological interventions, particularly CBT-I (mostly in the 2000s) and dCBT-I (mostly in the last decade), although presenting a reduced methodological quality in comparison to pharmacological interventions. These data suggest an increasing focus on non-pharmacological interventions for insomnia.
本研究旨在描述失眠症随机对照试验(RCT)的出版概况。我们对有关成人非合并失眠症干预措施的 RCT 进行了系统回顾,共检索到 132 项 RCT,其中 58 项涉及药物治疗,71 项涉及非药物治疗,3 项涉及两种干预措施:其中58项涉及药物治疗,71项涉及非药物治疗,3项涉及两种干预措施。发表论文最多的治疗方法是数字CBT-I(dCBT-I)(35例)、面对面CBT-I(28例)和唑吡坦(22例)。关于 dCBT-I,发表年份的中位数是 2019 年,每年发表 1.13 ± 1.91 篇 RCT。关于唑吡坦,发表年份的中位数为 2008 年,每年发表的 RCT 为 0.71 ± 0.97 篇。关于面对面 CBT-I,中位发表年份为 2018 年,每年发表 0.90 ± 1.14 篇 RCT。现有的研究性临床试验大多是关于非药物干预的,尤其是 CBT-I(大多是在 2000 年代)和 dCBT-I(大多是在最近十年),尽管与药物干预相比,其方法学质量有所下降。这些数据表明,对失眠的非药物干预越来越受到重视。
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引用次数: 0
Melatonin’s role in the timing of sleep onset is conserved in nocturnal mice 褪黑激素在夜行性小鼠睡眠开始时间中的作用是一致的
Pub Date : 2024-11-01 DOI: 10.1038/s44323-024-00013-1
Pureum Kim, Nicholas Garner, Annaleis Tatkovic, Rex Parsons, Prasad Chunduri, Jana Vukovic, Michael Piper, Martina Pfeffer, Marco Weiergräber, Henrik Oster, Oliver Rawashdeh
Melatonin supplementation strengthens non‐restorative sleep rhythms and its temporal alignment in both humans and night-active rodents. Of note, although the sleep cycle is reversed in day-active and night-active (nocturnal) mammals, both, produce melatonin at night under the control of the circadian clock. The effects of exogenous melatonin on sleep and sleepiness are relatively clear, but its endogenous role in sleep, particularly, in timing sleep onset (SO), remains poorly understood. We show in nocturnal mice that the increases in mid-nighttime sleep episodes, and the mid-nighttime decline in activity, are coupled to nighttime melatonin signaling. Furthermore, we show that endogenous melatonin modulates SO by reducing the threshold for wake-to-sleep transitioning. Such link between melatonin and SO timing may explain phenomena such as increased sleep propensity in circadian rhythm sleep disorders and chronic insomnia in patients with severely reduced nocturnal melatonin levels. Our findings demonstrate that melatonin’s role in sleep is evolutionarily conserved, effectively challenging the argument that melatonin cannot play a major role in sleep regulation in nocturnal mammals, where the main activity phase coincides with high melatonin levels.
在人类和夜间活动的啮齿类动物中,补充褪黑激素可加强非恢复性睡眠节律及其时间调整。值得注意的是,虽然昼行性和夜行性(夜行性)哺乳动物的睡眠周期是相反的,但两者都在昼夜节律钟的控制下于夜间产生褪黑激素。外源性褪黑激素对睡眠和嗜睡的影响相对明确,但其在睡眠中的内源性作用,特别是在睡眠开始(SO)的时间上的作用,仍然鲜为人知。我们在夜间活动的小鼠身上发现,午夜睡眠发作的增加和午夜活动的减少与夜间褪黑激素信号传导有关。此外,我们还发现内源性褪黑激素通过降低唤醒到睡眠转换的阈值来调节睡眠时间。褪黑激素与睡眠时间之间的这种联系可以解释昼夜节律睡眠障碍中睡眠倾向增加以及夜间褪黑激素水平严重降低的患者长期失眠等现象。我们的研究结果表明,褪黑激素在睡眠中的作用在进化过程中得到了保留,从而有效地质疑了褪黑激素不能在夜间哺乳动物的睡眠调节中发挥主要作用的论点,因为夜间哺乳动物的主要活动阶段与褪黑激素的高水平相吻合。
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引用次数: 0
How stepping out helped us tune in: finding space and time to think as an early career researcher 走出如何帮助我们调整:作为一名早期职业研究人员,寻找思考的空间和时间
Pub Date : 2024-10-01 DOI: 10.1038/s44323-024-00010-4
Manuel Spitschan, Laura Kervezee, Renske Lok, Elise McGlashan, Raymond P. Najjar
The transition from postdoc to junior faculty is exciting and uniquely challenging. On one hand, it allows for increased creative freedom and the opportunity to grow into an independent scientist. On the other hand, it comes with increasing administrative responsibilities, feelings of isolation, and high pressure to perform. The result is an environment that can leave very limited time for creative thinking and reflection. Here, we describe how participating in a program that allowed us to step out of our routine and work together helped us become more independent—and regain time to think.
从博士后到青年教师的转变令人兴奋,同时也具有独特的挑战性。一方面,博士后可以获得更多的创造自由,并有机会成长为一名独立的科学家。另一方面,随之而来的是越来越多的行政责任、孤独感和工作压力。结果是,在这种环境下,留给创造性思维和反思的时间非常有限。在这里,我们将描述如何通过参加一个让我们跳出常规、一起工作的项目来帮助我们变得更加独立,并重新获得思考的时间。
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引用次数: 0
AAV8-P301L tau expression confers age-related disruptions in sleep quantity and timing AAV8-P301L tau表达会导致与年龄有关的睡眠数量和时间紊乱
Pub Date : 2024-10-01 DOI: 10.1038/s44323-024-00009-x
Bryan R. Alava, Andrew R. Morris, Andrew C. Liu, Jose F. Abisambra, Karyn A. Esser
Sleep timing and quantity disturbances persist in tauopathy patients. This has been studied in transgenic models of primary tau neuropathology using traditional electroencephalograms (EEGs) and more recently, the PiezoSleep Mouse Behavioral Tracking System. Here, we generated a primary tauopathy model using an intracerebroventricular injection of human mutant hSyn-P301L-tau, using adeno-associated virus of serotype 8 (AAV8). We discovered distinctions in sleep architecture with altered quantity and timing in AAV8-P301L tau expressing mice of both sexes using the noninvasive PiezoSleep System. The AAV8-P301L tau mice exhibit striking age-related increases in sleep duration specifically at the active phase onset, suggesting a critical and sensitive time-of-day for tauopathy related sleep disturbances to occur. Since our findings show sleep behavior changes at specific transitional periods of the day, tau neuropathology may impact normal diurnal variation in biological processes, which should be explored using the AAV8-P301L tauopathy model.
tau蛋白病患者的睡眠时间和数量障碍持续存在。利用传统脑电图(EEG)和最近的压电睡眠小鼠行为跟踪系统(PiezoSleep Mouse Behavioral Tracking System)在原发性tau神经病理的转基因模型中对此进行了研究。在这里,我们利用 8 号血清型腺相关病毒(AAV8),通过脑室内注射人类突变体 hSyn-P301L-tau,建立了原发性 tau 病模型。我们利用无创压电睡眠系统(PiezoSleep System)发现,在表达 AAV8-P301L tau 的雌雄小鼠中,睡眠结构的数量和时间都发生了改变。AAV8-P301L tau小鼠的睡眠持续时间与年龄相关,特别是在活跃期开始时显著增加,这表明与tauopathy相关的睡眠障碍发生在一天中的一个关键而敏感的时间段。由于我们的研究结果表明睡眠行为在一天中特定的过渡时期会发生变化,因此tau神经病变可能会影响生物过程的正常昼夜变化,这一点应使用AAV8-P301L tau病模型进行探索。
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引用次数: 0
Prior-night sleep predicts next-day symptoms over ten days among military personnel with sleep problems 前一晚的睡眠可预测有睡眠问题的军人在十天内第二天出现的症状
Pub Date : 2024-10-01 DOI: 10.1038/s44323-024-00008-y
Emerson M. Wickwire, Jacob Collen, Vincent F. Capaldi II, Zhiwei Zhao, Scott G. Williams, Connie L. Thomas, Samson Z. Assefa, Jennifer S. Albrecht, Shuo Chen
This study employed remote monitoring/ecological momentary assessment methods to test the hypothesis that prior-night sleep is associated with next-day symptoms. Military personnel with sleep problems (N = 270) completed daily sleep diaries and twice-daily symptom surveys via smartphone and wore a commercial wearable for ten days. In lagged analyses controlling for age and sex, prior-night sleep was robustly associated with next-day symptoms. Findings support remote approaches to assess sleep and next-day symptoms.
本研究采用远程监控/生态瞬间评估方法来验证前一天晚上的睡眠与第二天症状相关的假设。有睡眠问题的军人(270 人)通过智能手机完成每日睡眠日记和每日两次症状调查,并佩戴商用可穿戴设备十天。在控制年龄和性别的滞后分析中,前一晚的睡眠与第二天的症状密切相关。研究结果支持远程评估睡眠和第二天症状的方法。
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引用次数: 0
Chronobiotic and cytoprotective activity of melatonin in the cardiovascular system. Doses matter 褪黑素在心血管系统中的慢性生物和细胞保护活性。剂量问题
Pub Date : 2024-09-09 DOI: 10.1038/s44323-024-00007-z
Daniel P. Cardinali, Daniel E. Vigo
A circadian disruption, manifested by disturbed sleep and low-grade inflammation, is commonly seen in cardiovascular diseases (CVDs). The decline in plasma melatonin, which is a conserved phylogenetic molecule across all known aerobic creatures, is also a common feature in CVDs. The daily evening pineal melatonin surge synchronizes both the central pacemaker located in the hypothalamic suprachiasmatic nuclei and myriads of cellular clocks in the periphery (“chronobiotic effect”). Melatonin also has cytoprotective properties, acting primarily not only as an antioxidant by buffering free radicals but also by regulating inflammation. In CVDs, exogenous melatonin administration decreases nocturnal hypertension, improves systolic and diastolic blood pressure, reduces the pulsatility index in the internal carotid artery, decreases platelet aggregation, and reduces serum catecholamine levels. Melatonin evokes an increase in parasympathetic activity in the heart. Allometric calculations based on animal research show that melatonin’s cytoprotective benefits in CVDs may require high doses to be fully manifested (in the 100–200 mg/day range). If melatonin is expected to improve health in CVDs, the low doses currently used in clinical trials (i.e., 2–10 mg) are presumably insufficient.
昼夜节律紊乱表现为睡眠紊乱和低度炎症,常见于心血管疾病(CVDs)。血浆中褪黑激素的下降也是心血管疾病的一个共同特征,褪黑激素是所有已知有氧生物的系统发育保守分子。每天傍晚松果体褪黑激素的激增会使位于下丘脑上核的中央起搏器和外围的无数细胞时钟同步("时间生物效应")。褪黑激素还具有细胞保护特性,它不仅是一种缓冲自由基的抗氧化剂,还能调节炎症。在心血管疾病中,外源性褪黑素可降低夜间高血压,改善收缩压和舒张压,降低颈内动脉的搏动指数,减少血小板聚集,降低血清儿茶酚胺水平。褪黑激素能增强心脏的副交感神经活动。根据动物研究进行的计量计算显示,褪黑素对心血管疾病的细胞保护作用可能需要高剂量才能充分体现(100-200 毫克/天)。如果褪黑激素有望改善心血管疾病患者的健康状况,那么目前临床试验中使用的低剂量(即 2-10 毫克)可能是不够的。
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引用次数: 0
Crosstalk between salicylic acid signalling and the circadian clock promotes an effective immune response in plants 水杨酸信号传导与昼夜节律时钟之间的相互联系促进了植物的有效免疫反应
Pub Date : 2024-09-02 DOI: 10.1038/s44323-024-00006-0
Olivia J. P. Fraser, Samantha J. Cargill, Steven H. Spoel, Gerben van Ooijen
The rotation of Earth creates a cycle of day and night, leading to predictable changes in environmental conditions. The circadian clock synchronizes an organism with these environmental changes and alters their physiology in anticipation. Prediction of the probable timing of pathogen infection enables plants to prime their immune system without wasting resources or sacrificing growth. Here, we explore the relationship between the immune hormone salicylic acid (SA), and the circadian clock in Arabidopsis. We found that SA altered circadian rhythmicity through the SA receptor and master transcriptional coactivator, NPR1. Reciprocally, the circadian clock gates SA-induced transcript levels of NPR1-dependent immune genes. Furthermore, the clock gene CCA1 is essential for SA-induced immunity to the major bacterial plant pathogen Pseudomonas syringae. These results build upon existing studies of the relationship between the circadian clock and SA signalling and how interactions between these systems produce an effective immune response. Understanding how and why the immune response in plants is linked to the circadian clock is crucial in working towards improved crop productivity.
地球的自转形成了昼夜循环,导致环境条件发生可预测的变化。昼夜节律使生物体与这些环境变化同步,并根据预期改变其生理机能。预测病原体感染的可能时间能让植物在不浪费资源或牺牲生长的情况下启动免疫系统。在这里,我们探讨了免疫激素水杨酸(SA)与拟南芥昼夜节律时钟之间的关系。我们发现,水杨酸通过水杨酸受体和主转录辅激活因子 NPR1 改变了昼夜节律性。与此相对应,昼夜节律钟会控制 SA 诱导的 NPR1 依赖性免疫基因的转录水平。此外,时钟基因 CCA1 对于 SA 诱导的对主要细菌性植物病原体丁香假单胞菌的免疫至关重要。这些结果建立在对昼夜节律时钟和 SA 信号之间的关系以及这些系统之间的相互作用如何产生有效免疫反应的现有研究基础之上。了解植物的免疫反应如何以及为什么与昼夜节律时钟有关,对于提高作物产量至关重要。
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引用次数: 0
Evidence for ~12-h ultradian gene programs in humans 人类约 12 小时昼夜节律基因程序的证据
Pub Date : 2024-08-09 DOI: 10.1038/s44323-024-00005-1
Bokai Zhu, Silvia Liu, Natalie L. David, William Dion, Nandini K. Doshi, Lauren B. Siegel, Tânia Amorim, Rosemary E. Andrews, G. V. Naveen Kumar, Hanwen Li, Saad Irfan, Tristan Pesaresi, Ankit X. Sharma, Michelle Sun, Pouneh K. Fazeli, Matthew L. Steinhauser
Mice and many marine organisms exhibit ~12-h ultradian rhythms, however, direct evidence of ~12-h ultradian rhythms in humans is lacking. Here, we performed prospective, temporal transcriptome profiling of peripheral white blood cells from three healthy humans. All three participants independently exhibited robust ~12-h transcriptional rhythms in molecular programs involved in RNA and protein metabolism, with strong homology to circatidal gene programs previously identified in Cnidarian marine species.
小鼠和许多海洋生物都表现出 ~12 小时的超昼夜节律,但人类却缺乏 ~12 小时超昼夜节律的直接证据。在这里,我们对三名健康人的外周白细胞进行了前瞻性的时间转录组分析。在涉及 RNA 和蛋白质代谢的分子程序中,所有三名参与者都独立地表现出了强烈的 ~12-h 转录节律,这与之前在蛇尾目海洋物种中发现的环流基因程序有很强的同源性。
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引用次数: 0
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npj Biological Timing and Sleep
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