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Photoisomerization in rhodopsins: Shape-changing reactions of retinal at low temperatures 犀牛蛋白中的光异构化:低温下视网膜的形状变化反应
Pub Date : 2024-07-11 DOI: 10.1063/5.0183056
Hideki Kandori, Masahiro Sugiura, Kota Katayama
Rhodopsins are photoreceptive membrane proteins containing 11-cis (animal rhodopsins) and all-trans (microbial rhodopsins) retinal chromophores. Animal rhodopsins act as G protein–coupled receptors, whereas microbial rhodopsins serve numerous roles and can act as light-driven ion pumps, photosensors, light-gated ion channels, and light-activated enzymes. Microbial rhodopsins play crucial roles in optogenetics. Isomerization is a shape-changing reaction that does not occur at low temperatures. In contrast, primary photo-intermediates are formed in rhodopsins even at 77 K. Therefore, the primary reactions in rhodopsins were debated in the 1970s, although isomerization was initially proposed. The ultrafast spectroscopy analysis of bovine rhodopsin containing an 11-cis-locked retinal chromophore revealed that the primary event in our vision is retinal photoisomerization. Moreover, molecular motions have been directly visualized by time-resolved x-ray crystallography. The unique ability of rhodopsins to undergo isomerization at 77 K was used to determine structural changes by low-temperature Fourier transform infrared spectroscopy, with detailed vibrational analysis providing structural information on animal and microbial rhodopsins, including protein-bound water. In contrast, unusual isomerization pathways (all-trans to 7-cis or 11-cis) and temperature effects (no reactions at <273 or <170 K) have been found for near-infrared light–absorbing microbial rhodopsins.
犀牛蛋白是一种感光膜蛋白,含有 11-顺式(动物犀牛蛋白)和全反式(微生物犀牛蛋白)视网膜发色团。动物的视黄素是 G 蛋白偶联受体,而微生物的视黄素则有多种作用,可以充当光驱动离子泵、光敏元件、光门控离子通道和光激活酶。微生物斜视素在光遗传学中发挥着至关重要的作用。异构化是一种改变形状的反应,在低温下不会发生。因此,尽管最初提出了异构化的观点,但在 20 世纪 70 年代,人们一直在争论犀牛蛋白中的主要反应。对含有 11-顺式锁定视网膜发色团的牛视黄素进行超快光谱分析后发现,我们视觉中的主要反应是视网膜光异构化。此外,分子运动还可通过时间分辨 X 射线晶体学直接观察到。通过低温傅立叶变换红外光谱分析,详细的振动分析提供了动物和微生物视网膜素的结构信息,包括与蛋白质结合的水。与此相反,在近红外光吸收微生物荷尔蒙蛋白中发现了不寻常的异构化途径(全反式到 7 顺式或 11 顺式)和温度效应(在小于 273 K 或小于 170 K 时没有反应)。
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引用次数: 0
Perfluoroaryl⋯aryl interaction: The most important subset of π -hole⋯ π bonding 全氟芳基⋯芳基相互作用:π -孔⋯ π键的最重要子集
Pub Date : 2024-07-09 DOI: 10.1063/5.0205540
Weizhou Wang, Wen Xin Wu, Yu Zhang, Wei Jun Jin
The perfluoroaryl⋯aryl interaction, the most important subset of π-hole⋯π bonding, refers to the attractive stacking interaction between a perfluoroaryl group and an aryl group. In contrast to the aryl⋯aryl interaction with the same size, the much stronger perfluoroaryl⋯aryl interaction has its own characteristics and applications. A brief history of the development of the perfluoroaryl⋯aryl interaction was given first in this review, followed by an overview of the state-of-the-art of the nature of the perfluoroaryl⋯aryl interaction. Much attention was paid to the application of the perfluoroaryl⋯aryl interaction both in the traditional research fields such as crystal engineering and organic luminescent materials and in the hot research fields such as photovoltaics materials and biological engineering. It is believed that this timely and comprehensive review provides a foundation and guide for the future development and application of the perfluoroaryl⋯aryl interaction.
全氟芳基⋯芳基相互作用是π-孔⋯π键最重要的子集,指的是全氟芳基与芳基之间的吸引力堆积相互作用。与相同大小的芳基⋯芳基相互作用相比,强得多的全氟芳基⋯芳基相互作用有其自身的特点和应用。本综述首先简要介绍了全氟芳基⋯芳基相互作用的发展历史,然后概述了全氟芳基⋯芳基相互作用性质的最新进展。无论是在晶体工程和有机发光材料等传统研究领域,还是在光伏材料和生物工程等热点研究领域,全氟芳基⋯芳基相互作用的应用都备受关注。相信这篇及时而全面的综述将为全氟芳基⋯芳基相互作用的未来发展和应用提供基础和指导。
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引用次数: 0
Long carbon–carbon bonds and beyond 长碳碳键及其他
Pub Date : 2024-07-01 DOI: 10.1063/5.0214406
Masaya Kishimoto, Takashi Kubo
Advances in synthetic organic chemistry have facilitated the preparation and exploration of compounds exhibiting unusual bonding states. This review delves into carbon–carbon single bonds that are exceeding typical length of bonds, elucidating recent advances in understanding their bonding nature, properties, and chemical reactivity. Additionally, we examine factors contributing to the occurrence of such elongated bonds and their effects on other bonding parameters. Furthermore, we shift our focus toward the π-dimers of radical species, surpassing the limit of two-center two-electron (2c/2e) bonds, discussing their formation mechanisms, stability, and inherent properties. A key feature in the electronic structure of π-dimers is the bonding interaction of two unpaired electrons spanning multiple atoms, that is, multicenter two-electron (mc/2e) bonding. This review sheds light on the significant role played by extended carbon–carbon bonds (2c/2e bonds) and radical π-dimers (mc/2e bonding) in organic chemistry, providing valuable insight for future research on new functional materials.
合成有机化学的进步促进了对表现出不寻常键合状态的化合物的制备和探索。本综述深入探讨了超过典型键长的碳-碳单键,阐明了在了解其键合性质、属性和化学反应性方面的最新进展。此外,我们还研究了导致出现这种拉长键的因素及其对其他成键参数的影响。此外,我们将重点转向自由基物种的 π 二聚体,超越双中心双电子(2c/2e)键的极限,讨论它们的形成机制、稳定性和固有特性。π-二聚体电子结构的一个关键特征是跨越多个原子的两个未成对电子的成键相互作用,即多中心双电子(mc/2e)键。本综述揭示了碳-碳扩展键(2c/2e 键)和基π-二聚体(mc/2e 键)在有机化学中的重要作用,为今后研究新型功能材料提供了宝贵的启示。
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引用次数: 0
Energy and mass flow in photocatalytic water splitting by coupling photothermal effect 光热效应耦合光催化水分离中的能量流和质量流
Pub Date : 2024-07-01 DOI: 10.1063/5.0202991
Shujian Wang, Yitao Si, Kejian Lu, Feng Liu, Biao Wang, Shidong Zhao, Yi Wang, Shiyue Zhang, Youjun Lu, Naixu Li, Maochang Liu
Solar photocatalytic water splitting for hydrogen production represents an ideal approach to address the current energy and environmental challenges, while also achieving “carbon peak and carbon neutrality” goals. The incorporation of photothermal effect into photocatalysis enables dual utilization of both light and heat energies, resulting in improved solar-to-hydrogen efficiency. In this review, we first discussed the behavior of energy flow and mass flow, and the characteristics of photogenerated carrier throughout the photocatalytic water splitting process, with particular focus on the behaviors induced by photothermal effect. Subsequently, we elaborate on strategies for designing high-efficiency photothermal catalytic systems and novel photothermal–photocatalytic integrated systems based upon concentrating-photothermal coupling effects. We then illustrate the development and large-scale demonstrations that utilize concentrated solar irradiation. Finally, we outline the challenges and highlight the future research directions of photothermal catalysis toward hydrogen production from water. This review aims to provide fundamental references and principal strategies for efficient utilization of solar energy in photothermal catalytic processes.
太阳能光催化水分离制氢是应对当前能源和环境挑战的理想方法,同时还能实现 "碳峰值和碳中和 "目标。将光热效应融入光催化技术可实现光能和热能的双重利用,从而提高太阳能制氢的效率。在这篇综述中,我们首先讨论了整个光催化水分离过程中的能量流和质量流的行为,以及光生载流子的特性,尤其侧重于光热效应引起的行为。随后,我们阐述了基于聚光-光热耦合效应的高效光热催化系统和新型光热-光催化集成系统的设计策略。然后,我们说明了利用太阳聚光照射进行开发和大规模示范的情况。最后,我们概述了光热催化从水中制氢所面临的挑战,并强调了未来的研究方向。本综述旨在为光热催化过程中有效利用太阳能提供基本参考和主要策略。
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引用次数: 0
Ultrafast planarization of photoexcited ligands in metal–organic frameworks gates charge transfer to promote photocatalysis 金属有机框架中光激发配体的超快平面化门电荷转移促进光催化
Pub Date : 2024-05-07 DOI: 10.1063/5.0194451
Logan S. Lancaster, Taylor D. Krueger, Cheng Chen, E. N. Musa, Jacob M. Lessard, Nan-Chieh Chiu, Makenzie T. Nord, Kyriakos C. Stylianou, Chong Fang
Metal–organic frameworks (MOFs) have emerged as a highly tunable class of porous materials with wide-ranging applications from gas capture to photocatalysis. Developing these exciting properties to their fullest extent requires a thorough mechanistic understanding of the structure–function relationships. We implement an ultrafast spectroscopic toolset, femtosecond transient absorption and femtosecond stimulated Raman spectroscopy (FSRS), to elucidate the correlated electronic and vibrational dynamics of two isostructural 1,3,6,8-tetrakis(p-benzoic acid)pyrene (TBAPy)-based MOFs, which manifest drastically different photocatalytic behaviors. Systematic comparisons between the M3+-TBAPy MOFs and bare ligands in various environments reveal the unproductive dimer formation in Al-TBAPy, whereas Sc-TBAPy is dominated by a catalytically active charge-transfer (CT) process. Two ground-state FSRS marker bands of the TBAPy ligand at ∼1267 and 1617 cm−1 probe the chromophore environment at thermal equilibrium. For comparison, the excited-state FSRS of Sc-TBAPy suspended in neutral water unveils a key ∼300 fs twisting motion of the TBAPy peripheral phenyl groups toward planarity, promoting an efficient generation of CT species. This motion also exhibits high sensitivity to solvent environment, which can be a useful probe; we also showed the CT variation for ultrafast dynamics of Sc-TBAPy in the glyphosate aqueous solution. These new insights showcase the power of table-top tunable FSRS methodology to delineate structural dynamics of functional molecular systems in action, including MOFs and other photosensitive “nanomachines.” We expect the uncovered ligand motions (ultrafast planarization) to enable the targeted design of new MOFs with improved CT state characteristics (formation and lifetime) to power applications, including photocatalysis and herbicide removal from waterways.
金属有机框架(MOFs)是一类高度可调的多孔材料,具有从气体捕获到光催化的广泛应用。要最大限度地开发这些令人兴奋的特性,就必须对其结构-功能关系有透彻的机理了解。我们利用飞秒瞬态吸收和飞秒受激拉曼光谱(FSRS)这一超快光谱工具集,阐明了两种同结构的 1,3,6,8-四(对苯甲酸)芘 (TBAPy) 基 MOFs 的相关电子和振动动力学,它们表现出截然不同的光催化行为。对各种环境中的 M3+-TBAPy MOFs 和裸配体进行系统比较后发现,Al-TBAPy 中会形成非生产性二聚体,而 Sc-TBAPy 则以催化活跃的电荷转移(CT)过程为主。TBAPy 配体在 1267 和 1617 cm-1 处的两条基态 FSRS 标记带探测了热平衡时的发色团环境。相比之下,悬浮在中性水中的 Sc-TBAPy 的激发态 FSRS 揭示了 TBAPy 外围苯基基团朝向平面性的关键 ∼300 fs 扭转运动,促进了 CT 物种的有效生成。这种运动对溶剂环境也表现出高度敏感性,可作为一种有用的探针;我们还展示了草甘膦水溶液中 Sc-TBAPy 超快动力学的 CT 变化。这些新发现展示了桌面可调 FSRS 方法在描述功能分子系统(包括 MOFs 和其他光敏 "纳米机器")的结构动态方面的强大功能。我们希望所揭示的配体运动(超快平面化)能够帮助我们有针对性地设计出具有更好 CT 状态特征(形成和寿命)的新型 MOFs,为光催化和去除水道中的除草剂等应用提供动力。
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引用次数: 0
From technical lignin to native lignin: Depolymerization, functionalization, and applications 从工业木质素到天然木质素:解聚、功能化和应用
Pub Date : 2024-04-24 DOI: 10.1063/5.0196825
Gavin J. Giardino, Hongyan Wang, Jia Niu, Dunwei Wang
Lignocellulose as a form of biomass is inedible. It represents a renewable feedstock for the synthesis of chemicals and materials. Its utilization has become an area of growing interest. Of lignocellulose components, lignin is comparatively under-explored and under-utilized, despite its abundance. This Focus Review recognizes this missed opportunity and presents a concise overview on some of the most recent progress involving the generation and application of functional materials derived from lignin. Between the two commonly encountered forms of lignin, technical lignin is a by-product of the paper production industry and is highly processed under harsh conditions. As such, it has generally been used for filler and resin materials. By comparison, native lignin is rich in chemical functionalities and holds great promise for downstream chemical synthesis. In recognition of these potentials, “lignin-first” strategies have emerged to directly convert native lignin to building blocks rich in functional groups, such as alcohols and carbonyls, while maintaining the integrity of the aromatic structures in lignin. The lignin-first strategy complements the already well explored field of technical lignin utilization. These chemoselective, lignin-first methods promise routes to native lignin valorization into high-value building blocks while keeping cellulose and hemicellulose intact and, therefore, are particularly appealing. This Focus Review first recognizes the importance of the traditional strategies for technical lignin utilization and highlights some of the newest developments. It then puts an emphasis on these lignin-first approaches for improved native lignin utilizations.
木质纤维素是一种不可食用的生物质。它是合成化学品和材料的可再生原料。对它的利用已成为人们日益关注的领域。在木质纤维素成分中,尽管木质素含量丰富,但对其的开发和利用却相对不足。本焦点综述认识到了这一错失的机会,并简要概述了有关木质素衍生功能材料的生成和应用的一些最新进展。在两种常见的木质素形式中,工业木质素是造纸业的副产品,需要在苛刻的条件下进行高度加工。因此,它通常被用于填料和树脂材料。相比之下,原生木质素具有丰富的化学功能,在下游化学合成中大有可为。由于认识到这些潜力,"木质素优先 "战略应运而生,可将原生木质素直接转化为富含官能团(如醇和羰基)的构建模块,同时保持木质素中芳香结构的完整性。木质素优先 "战略是对木质素技术利用领域的有益补充。这些化学选择性、木质素优先的方法有望在保持纤维素和半纤维素完整性的同时,将木质素转化为高价值构筑物,因此特别具有吸引力。本重点综述首先肯定了传统木质素技术利用策略的重要性,并重点介绍了一些最新进展。然后重点介绍这些木质素优先的方法,以提高原生木质素的利用率。
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引用次数: 0
Advances in functionalized annihilators to extend triplet–triplet annihilation upconversion performances 扩展三重-三重湮灭上转换性能的官能化湮灭剂研究进展
Pub Date : 2024-04-01 DOI: 10.1063/5.0185259
Wen-Yue Lin, Zhi Huang, Ling Huang, Gang Han
Triplet–triplet annihilation upconversion (TTA-UC) has made major advances in many emerging fields in recent years, such as solar light harvesting, photocatalysis, biological imaging, and sensing. TTA-UC consists of photosensitizers and annihilators. In addition to acting as emitters, chemical modification of annihilators has expanded their roles to include the formation of organic gel to avoid oxygen-mediated triplet quenching, amplifying the asymmetry factor of circularly polarized luminescence, constructing an upconversion sensor as recognition units, serving as photoremovable protecting groups, and photocatalysts to realize long-wavelength light-driven organic transformations. Here, we will focus on the significant applications of functionalized annihilators other than photoluminescence, which are manifested via chemical modification with other functional units. Finally, we will elaborate on the existent issues with TTA-UC, including challenges in molecular design, material development, and emerging field applications. In accordance with our research experience, we will propose potential solutions.
近年来,三重-三重湮灭上转换(TTA-UC)在太阳能光收集、光催化、生物成像和传感等许多新兴领域取得了重大进展。TTA-UC 由光敏剂和湮灭剂组成。除了作为发射体之外,湮灭剂的化学修饰还将其作用扩展到形成有机凝胶以避免氧介导的三重淬灭、放大圆偏振发光的不对称系数、作为识别单元构建上转换传感器、作为光可移动保护基团以及光催化剂以实现长波长光驱动的有机转化。在此,我们将重点介绍除光致发光外,功能化湮灭剂的其他重要应用,这些应用可通过与其他功能单元进行化学修饰来实现。最后,我们将阐述 TTA-UC 目前存在的问题,包括分子设计、材料开发和新兴领域应用方面的挑战。根据我们的研究经验,我们将提出潜在的解决方案。
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引用次数: 0
Aggregation-induced emission luminogens for super-resolution imaging 用于超分辨率成像的聚集诱导发射发光剂
Pub Date : 2024-02-27 DOI: 10.1063/5.0170812
Yunfei Zuo, R. K. Kwok, Jianwei Sun, J. Lam, Ben Zhong Tang
Over the past three decades, humanity has successfully surpassed Abbe's diffraction limit through the development of super-resolution microscopy (SRM), which leads to an increasing demand for specialized fluorescent molecules. The concept of aggregation-induced emission (AIE) has emerged as a powerful tool in fluorescence imaging since its inception in 2001. While thousands of distinctive AIE-based fluorescent molecules have been extensively utilized, their application in SRM was not explored until 2013. Although fewer than one hundred works on AIE and SRM have been published so far, this field is experiencing rapid growth. This review provides a comprehensive summary of advancements made by these intersecting domains over the last decade. The recent research is outlined, and four future directions are highlighted to guide the design of high-quality AIE-based probes for SRM applications that can further advance and promote this exciting area of research.
在过去的三十年里,人类通过开发超分辨率显微镜(SRM)成功超越了阿贝衍射极限,这导致对专用荧光分子的需求不断增加。聚集诱导发射(AIE)的概念自 2001 年提出以来,已成为荧光成像的有力工具。虽然数千种基于 AIE 的独特荧光分子已被广泛应用,但其在 SRM 中的应用直到 2013 年才开始探索。虽然迄今为止有关 AIE 和 SRM 的著作不足百篇,但这一领域正在经历快速发展。本综述全面总结了这些交叉领域在过去十年中取得的进展。本文概述了近期的研究,并强调了未来的四个方向,以指导设计基于 AIE 的高质量 SRM 应用探针,从而进一步推动和促进这一令人兴奋的研究领域。
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引用次数: 0
Particle–polymer interactions for 3D printing material design 用于 3D 打印材料设计的粒子-聚合物相互作用
Pub Date : 2024-01-31 DOI: 10.1063/5.0179181
Kellen Mitchell, W. Hua, Erick Bandala, A. Gaharwar, Yifei Jin
Embedded ink writing (EIW) and direct ink writing (DIW) constitute the primary strategies for three-dimensional (3D) printing within the realm of material extrusion. These methods enable the rapid fabrication of complex 3D structures, utilizing either yield-stress support baths or self-supporting inks. Both these strategies have been extensively studied across a range of fields, including biomedical, soft robotics, and smart sensors, due to their outstanding print fidelity and compatibility with diverse ink materials. Particle additives capable of forming volume-filling 3D networks are frequently incorporated into polymer solvents. This integration is crucial for engineering the requisite microstructures essential for the formulation of successful support bath and ink materials. The interplay between the particle additives and polymer solvents is critical for achieving rheological tunability in various 3D printing strategies, yet this area has not been systematically reviewed. Therefore, in this critical review, we examined various mechanisms of particle–polymer interactions, the resulting microstructures, and their subsequent impact on mechanical and rheological properties. Overall, this work aims to serve as a foundational guideline for the design of next-generation materials in the field of extrusion additive manufacturing, specifically for EIW and DIW.
嵌入式墨水写入(EIW)和直接墨水写入(DIW)是材料挤压领域三维(3D)打印的主要策略。这些方法可以利用屈服应力支撑槽或自支撑油墨快速制造复杂的三维结构。这两种方法都具有出色的打印保真度和与不同油墨材料的兼容性,因此已在生物医学、软机器人和智能传感器等多个领域得到广泛研究。能够形成体积填充三维网络的颗粒添加剂经常被加入聚合物溶剂中。这种整合对于设计成功的支撑槽和油墨材料配方所必需的微观结构至关重要。颗粒添加剂和聚合物溶剂之间的相互作用对于在各种三维打印策略中实现流变可调性至关重要,但这一领域尚未得到系统的研究。因此,在本评论中,我们研究了颗粒与聚合物相互作用的各种机制、由此产生的微观结构及其对机械和流变特性的后续影响。总之,这项工作旨在为挤出增材制造领域(特别是 EIW 和 DIW)的下一代材料设计提供基础指导。
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引用次数: 0
Recent developments in low-dimensional heterostructures of halide perovskites and metal chalcogenides as emergent materials: Fundamental, implementation, and outlook 作为新兴材料的卤化物包晶和金属瑀的低维异质结构的最新发展:基础、实施和展望
Pub Date : 2024-01-30 DOI: 10.1063/5.0176763
P. Y. D. Maulida, Sri Hartati, Yuliar Firdaus, Anjar Taufik Hidayat, L. J. Diguna, Dominik Kowal, Annalisa Bruno, D. Cortecchia, A. Arramel, M. Birowosuto
In the past decades, halide perovskites and chalcogenide materials have provided significant contributions to the vast development for optoelectronic applications. Halide perovskites are known for their tunable properties, while chalcogenides are known for their high efficiency. The combination of these types of materials as heterostructures is thought to have been able to produce a superior device/photophysical performance. A peculiar aspect to consider is an inherent weak interaction between these layers via the stacking of different materials, promoting the realization of van der Waals heterostructures with novel functional properties. In this review, we summarize the progress and foresee the prospectives of material systems obtained by combining low-dimensional (0D, 1D, and 2D) halide perovskite and chalcogenide systems. Both emergent materials share their promise in terms of energy and charge transfer consideration. In addition, several aspects that are mutually important in this context will be outlined, namely, interlayer excitons, interfacial engineering, quantum confinement effect, and light–matter interactions. Based on these fundamental approaches, we translate the current understanding by highlighting several representative heterostructures with prominent performance such as light-emitting diodes, x-ray detectors, photodetectors, and solar cells. In this review, we focus on the rich chemistry and photophysics of these heterostructures, emphasizing the open questions related to their structure–property relationship. Finally, potential research directions and outlooks based on the implementation of halide perovskite–chalcogenide heterostructures are also proposed.
在过去的几十年里,卤化物包晶和钙钛矿材料为光电应用的巨大发展做出了重要贡献。卤化物透镜以其可调特性而闻名,而钙钛矿则以其高效率而闻名。将这些类型的材料组合成异质结构,被认为能够产生卓越的器件/光物理性能。需要考虑的一个特殊方面是,通过不同材料的堆叠,这些层之间会产生固有的微弱相互作用,从而促进具有新功能特性的范德华异质结构的实现。在这篇综述中,我们总结了通过结合低维(0D、1D 和 2D)卤化物包晶和钙钛矿系统而获得的材料系统的进展并展望了其前景。从能量和电荷转移的角度考虑,这两种新兴材料都具有共同的前景。此外,我们还将概述在这方面相互重要的几个方面,即层间激子、界面工程、量子约束效应和光物质相互作用。在这些基本方法的基础上,我们将通过重点介绍几种具有突出性能的代表性异质结构,如发光二极管、X 射线探测器、光电探测器和太阳能电池,来诠释当前的理解。在这篇综述中,我们重点介绍了这些异质结构丰富的化学和光物理特性,并强调了与它们的结构-性能关系相关的未决问题。最后,我们还提出了基于卤化物包晶-钙钛矿异质结构的潜在研究方向和展望。
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引用次数: 0
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