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Positive Predictive Value of Primary Subarachnoid Hemorrhage Diagnoses on Death Certificates. 死亡证明书上原发性蛛网膜下腔出血诊断的阳性预测价值。
IF 0.8 4区 医学 Q3 Medicine Pub Date : 2022-09-21 DOI: 10.25011/cim.v45i3.38874
Shane English, Carl van Walraven Van Walraven

Purpose: Epidemiological studies of primary subarachnoid hemorrhage (pSAH) frequently include population-based death registries for case finding. The positive predictive value of pSAH diagnoses in death registries is unknown.

Methods: This cross-sectional study identified all people in Ontario, Canada with pSAH listed as a cause of death between 2013 and 2017. pSAH was classified as "very likely" if diagnosis of pSAH was confirmed by autopsy, there was a previous hospitalization where pSAH probability exceeded 85% or death was preceded within a week by an emergency room visit where pSAH probability exceeded 25%. pSAH was classified as "very unlikely" if previous cerebrovascular imaging had never been done. Remaining cases were classified as "pSAH status unknown".

Results: 1,613 deaths attributed to pSAH were identified (mean 322/year). pSAH classification frequencies were as follows: very likely 528 (32.7%); very unlikely 433 (26.8%); and status unknown 652 (40.4%).

Conclusion: We found that a quarter of pSAH cases in our province's death registry were very unlikely to be true pSAH while 40% had unknown veracity. These data should be considered when using death registries for pSAH case finding.

目的:原发性蛛网膜下腔出血(pah)的流行病学研究通常包括基于人群的死亡登记,以发现病例。死亡登记中pah诊断的阳性预测值尚不清楚。方法:本横断面研究确定了2013年至2017年期间加拿大安大略省所有将pah列为死因的人。如果尸检证实pah诊断为pah,既往住院且pah概率超过85%,或死亡前一周内急诊就诊且pah概率超过25%,则pah被归类为“非常可能”。如果以前从未做过脑血管成像,pah被归类为“非常不可能”。其余病例归类为“pah状态未知”。结果:发现1613例pah死亡(平均322例/年)。pah分类频次如下:极有可能528例(32.7%);非常不可能433人(26.8%);身份不明652例(40.4%)。结论:我们发现,在我省死亡登记的pah病例中,有四分之一的病例不太可能是真实的pah,而40%的病例的准确性未知。在使用死亡登记查找pah病例时应考虑这些数据。
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引用次数: 0
Overview of The Canadian Clinician Investigator Trainees' Research Presented at CSCI-CITAC Joint Meeting. CSCI-CITAC联席会议上加拿大临床研究员实习生研究综述。
IF 0.8 4区 医学 Q3 Medicine Pub Date : 2022-09-21 DOI: 10.25011/cim.v45i3.39271
Valera Castanov, Melissa Phuong, Claudia Turco, Sani Eskinazi, Robert Lao, Emmanuelle LeBlanc, Adam Pietrobon, Zacharie Saint-Georges, Wenxuan Wang, Amelia Yuan, Heather Whittaker

The 2021 Annual Joint Meeting (AJM) and Young Investigators' Forum of the Canadian Society for Clinical Investigation / Société Canadienne de Recherches Clinique (CSCI/SCRC) and Clinician Investigator Trainee Association of Canada/Association des Cliniciens-Chercheurs en Formation du Canada (CITAC/ACCFC) was hosted virtually on November 14-16th, 2021. The theme of the AJM was "Communication, Collaboration, and Tools for the Next Generation of Clinician Scientists", and emphasized lectures, panels and interactive workshops designed to provide knowledge and skills for professional development of clinician investigator trainees. The opening remarks were given by Nicola Jones (President of CSCI/SCRC) and Adam Pietrobon (Past President of CITAC/ACCFC). The keynote speaker was Dr. Timothy Caulfield, who delivered the presentation titled "Communication in the Era of Misinformation". Dr. Michael Hill (University of Calgary) received the CSCI Distinguished Scientist Award and Dr. Philippe Campeau (Université de Montréal) received the CSCI Joe Doupe Young Investigator Award. Each of the scientists delivered award winning talks during the symposium titled "All the King's Horses and All the King's Men" and "Understanding Growth Plate Disorders to Better Treat Them", respectively. The three interactive workshops included "Data Visualization", "Science Communication on Social Media" and "Mentorship in Action". The two panels were "CIHR Engagement: Challenges and Opportunities in the Clinician Investigator Career Path" and "Early Career Investigator Panel". The AJM also included presentations from clinician investigator trainees from across the country. Over 60 abstracts were showcased at this year's meeting, most of which are summarized in this review. Six outstanding abstracts were selected for oral presentations during the President's Forum.

加拿大临床研究学会/加拿大临床研究学会(CSCI/SCRC)和加拿大临床研究员实习生协会/加拿大临床研究协会(CITAC/ACCFC) 2021年年度联席会议(AJM)和青年研究员论坛于2021年11月14日至16日在加拿大举行。AJM的主题是“下一代临床科学家的沟通、协作和工具”,并强调讲座、小组讨论和互动研讨会,旨在为临床研究员培训生提供专业发展的知识和技能。Nicola Jones (CSCI/SCRC主席)和Adam Pietrobon (CITAC/ACCFC前任主席)致开幕词。主讲人是Timothy Caulfield博士,他发表了题为“错误信息时代的沟通”的演讲。Michael Hill博士(卡尔加里大学)获得CSCI杰出科学家奖,Philippe Campeau博士(蒙特卡罗大学)获得CSCI Joe Doupe青年研究者奖。每位科学家分别在题为“所有国王的马和所有国王的人”和“了解生长盘紊乱以更好地治疗它们”的研讨会上发表了获奖演讲。三个互动工作坊包括“数据可视化”、“社交媒体上的科学传播”和“行动导师”。两个小组分别是“CIHR参与:临床医生调查员职业道路的挑战和机遇”和“早期职业调查员小组”。AJM还包括来自全国各地的临床研究员实习生的演讲。在今年的会议上展示了60多篇摘要,其中大部分在本文中进行了总结。选出了六份杰出的摘要作为总统论坛期间的口头报告。
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引用次数: 0
Fall 2022: Clinician Investigator Trainee Association of Canada (CITAC). 2022年秋季:加拿大临床研究员培训协会(CITAC)。
IF 0.8 4区 医学 Q3 Medicine Pub Date : 2022-09-21 DOI: 10.25011/cim.v45i3.39272
Melissa S Phuong Phuong, Valera Castanov, Claudia Turco, Robert Lao, Wenxuan Wang, Amelia Yuan, Heather Whittaker

On behalf of the Clinical Investigator Trainee Association of Canada (CITAC) Board of Directors, I would like to extend an enthusiastic welcome to our new MD+ trainee members! I hope you soaked up all that summer had to offer and are in good back-to-school spirits. A new academic year is upon us, and opportunities abound for the Canadian physician scientist trainee community.

我谨代表加拿大临床研究培训生协会(CITAC)董事会,热烈欢迎我们的MD+培训生新成员!我希望你吸收了夏天所提供的一切,并以良好的返校精神。新的学年即将来临,加拿大医师、科学家和实习生的机会比比皆是。
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引用次数: 0
Facilitators and Barriers to Clinical Pathway Uptake and Utilization Among Primary Care Providers in Saskatchewan - A Qualitative Study. 萨斯喀彻温省初级保健提供者的临床途径吸收和利用的促进因素和障碍-一项定性研究。
IF 0.8 4区 医学 Q3 Medicine Pub Date : 2022-06-26 DOI: 10.25011/cim.v45i2.38450
Gary Groot, Shaliny Ollegasagrem, Mahasti Khakpour, Adel Panahi, Donna Goodridge, Joshua Lloyd, Leigh Kinsman, Thomas Rotter, Zane Tymchak, Tracey Carr

Purpose: Clinical Pathways (CPWs) are multidisciplinary, evidence-based, complex interventions designed to standardize patient care. In Saskatchewan, development, implementation and evaluation of the seven provincial CPWs (Hip & Knee, Spine, Pelvic Floor, Prostate Assessment, Fertility Care, Lower Extremity Wound Care and Acute Stroke) present significant challenges, leading to low utilization. This study aimed to identify facilitators and barriers to CPW utilization by Saskatchewan family physicians.

Methods: To identify the facilitators and barriers to CPWs, a qualitative interpretive approach consisted of eight one-on-one key informant interviews and five focus groups held with 30 family physicians in two larger urban and two smaller Saskatchewan cities. Inductive, thematic analysis of the interviews based on the Theoretical Domain Framework for behavioral changes was used to identify facilitators and barriers to CPW uptake and utilization.

Results: Fifty-one themes were mapped under 14 Theoretical Domain Framework domains. Major barriers included the following: system-level (knowledge and communication, social/professional identity, family physician engagement and education); objective clarification (goals, belief about consequences of implementing CPW); and technical and resource related (administrative, access to local specialists, enforcement and incentives). The most prominent barrier was lack of systematic CPW promotion and inconsistencies in communication between the following: organization-to-practitioner; organization-to-organization; and practitioner-to-practitioner. Facilitators who mitigated barriers were need for optimized and integrated information technology services (i.e., Electronic Medical Records) and optimism towards CPW usage and patient outcomes.

Conclusions: This exploratory study identified specific improvements and recommendations required to promote uptake of CPWs based on perceived facilitators and barriers.

目的:临床路径(cpw)是多学科、循证、复杂的干预措施,旨在规范患者护理。在萨斯喀彻温省,七种省级cpw(髋关节和膝关节、脊柱、骨盆底、前列腺评估、生育护理、下肢伤口护理和急性中风)的发展、实施和评估面临重大挑战,导致利用率低。本研究旨在确定萨斯喀彻温省家庭医生使用CPW的促进因素和障碍。方法:采用定性解释方法,对萨斯喀彻温省两个较大城市和两个较小城市的30名家庭医生进行了8次一对一的关键信息提供者访谈和5次焦点小组访谈,以确定CPWs的促进因素和障碍。基于行为改变的理论领域框架,对访谈进行归纳和专题分析,以确定CPW吸收和利用的促进因素和障碍。结果:51个主题被映射到14个理论领域框架域中。主要障碍包括:系统层面(知识和沟通、社会/职业认同、家庭医生参与和教育);客观澄清(目标,对实施CPW后果的信念);以及技术和资源相关(行政、获得当地专家、执法和奖励)。最突出的障碍是缺乏系统的CPW推广和以下方面的沟通不一致:组织对从业者;组织;和practitioner-to-practitioner。减少障碍的推动者是对优化和综合信息技术服务(即电子医疗记录)的需求以及对CPW使用和患者结果的乐观态度。结论:这项探索性研究确定了基于感知到的促进因素和障碍,促进cpw吸收所需的具体改进和建议。
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引用次数: 0
Metabolomics and Cytokine Analysis for Identification of Schizophrenia with Auditory Hallucination. 代谢物组学和细胞因子分析鉴别精神分裂症伴幻听。
IF 0.8 4区 医学 Q3 Medicine Pub Date : 2022-06-26 DOI: 10.25011/cim.v45i2.38096
Xinchun Li, Chao Yang, Xiaoli Liang, Dongfeng Li, Zhiqiang Zhou, Huiqiong Xiao, Xuejun Liu, Jie Li, Dong Yang, Meizhi Li

Purpose: To investigate the metabolic profile and biomarkers of schizophrenia with auditory hallucinations (AHs).

Methods: A total of 18 schizophrenic patients with the symptom of pure AHs (pAHs), 28 without AH (nAHs) and 43 age-matched healthy persons (Con) were enrolled in this study. Participants in pAHs and nAHs groups had relapsed into exacerbations of psychosis after self-discontinuing antipsychotics for at least one month; blood samples were drawn prior to restarting anti-psychotic treatment. Participants with history of recreational substance use were excluded. Positive and Negative Syndrome Scale (PANSS) and Auditory Hallucinations Rating Scale (AHRS) were used to assess the clinical mental state of all samples. Enzyme-linked immunosorbent assay (ELISA) was used to estimate the level of cytokines, and metabolomics analysis to identify potential biomarkers and pathways in the three groups. Graphpad 8.0 software was used to calculate the area under the receiver operating characteristic (ROC) curve. The relationship between metabolites and cytokines were determined using correlation analysis.

Results: Questionnaire scores showed significant differences in the positive symptom scale and PANSS total between nAHs and pAHs groups. Four cytokines (BDNF, IL-2, NGF-β and TNF-α) differed significantly among the three groups. Six molecules in the nAHs group (phenylalanine, hippurate, serine, glutamate, valine and cystine) and four in the pAHs group (phenylalanine, serine, glutamate and cystine) were identified as potential biomarkers. In addition, phenylalanine was shown as a potential independent diagnostic biomarker for pAHs. Correlation analysis revealed that cystine and serine were significantly negatively correlated with IL-2 in the pAHs group.

Conclusions: This study revealed the metabolic profile of patients with schizophrenia with AHs and provided new information to support the diagnosis. The identification of unique biomarkers would contribute to objective and reliable diagnoses of patients with schizophrenia with AH.

目的:探讨精神分裂症伴幻听(AHs)的代谢特征和生物标志物。方法:选取18例单纯AH (pAHs)症状的精神分裂症患者、28例无AH (nAHs)症状的精神分裂症患者和43例年龄匹配的健康人作为研究对象。多环芳烃组和nAHs组的参与者在自我停用抗精神病药物至少一个月后精神病复发加重;在重新开始抗精神病治疗前抽取了血样。有娱乐性物质使用史的参与者被排除在外。采用阳性与阴性综合征量表(PANSS)和幻听评定量表(AHRS)对所有样本的临床精神状态进行评定。使用酶联免疫吸附试验(ELISA)估计细胞因子水平,并使用代谢组学分析确定三组中潜在的生物标志物和途径。采用Graphpad 8.0软件计算受试者工作特征(ROC)曲线下面积。利用相关分析确定代谢物与细胞因子之间的关系。结果:nAHs组和pAHs组的阳性症状量表和PANSS总分在问卷得分上存在显著差异。四种细胞因子(BDNF、IL-2、NGF-β、TNF-α)在三组间差异显著。nAHs组的6个分子(苯丙氨酸、马尾氨酸、丝氨酸、谷氨酸、缬氨酸和胱氨酸)和pAHs组的4个分子(苯丙氨酸、丝氨酸、谷氨酸和胱氨酸)被确定为潜在的生物标志物。此外,苯丙氨酸被证明是多环芳烃潜在的独立诊断生物标志物。相关性分析显示,多环芳烃组胱氨酸和丝氨酸与IL-2呈显著负相关。结论:本研究揭示了精神分裂症合并AHs患者的代谢谱,为支持诊断提供了新的信息。鉴定独特的生物标志物将有助于客观可靠地诊断精神分裂症合并AH患者。
{"title":"Metabolomics and Cytokine Analysis for Identification of Schizophrenia with Auditory Hallucination.","authors":"Xinchun Li,&nbsp;Chao Yang,&nbsp;Xiaoli Liang,&nbsp;Dongfeng Li,&nbsp;Zhiqiang Zhou,&nbsp;Huiqiong Xiao,&nbsp;Xuejun Liu,&nbsp;Jie Li,&nbsp;Dong Yang,&nbsp;Meizhi Li","doi":"10.25011/cim.v45i2.38096","DOIUrl":"https://doi.org/10.25011/cim.v45i2.38096","url":null,"abstract":"<p><strong>Purpose: </strong>To investigate the metabolic profile and biomarkers of schizophrenia with auditory hallucinations (AHs).</p><p><strong>Methods: </strong>A total of 18 schizophrenic patients with the symptom of pure AHs (pAHs), 28 without AH (nAHs) and 43 age-matched healthy persons (Con) were enrolled in this study. Participants in pAHs and nAHs groups had relapsed into exacerbations of psychosis after self-discontinuing antipsychotics for at least one month; blood samples were drawn prior to restarting anti-psychotic treatment. Participants with history of recreational substance use were excluded. Positive and Negative Syndrome Scale (PANSS) and Auditory Hallucinations Rating Scale (AHRS) were used to assess the clinical mental state of all samples. Enzyme-linked immunosorbent assay (ELISA) was used to estimate the level of cytokines, and metabolomics analysis to identify potential biomarkers and pathways in the three groups. Graphpad 8.0 software was used to calculate the area under the receiver operating characteristic (ROC) curve. The relationship between metabolites and cytokines were determined using correlation analysis.</p><p><strong>Results: </strong>Questionnaire scores showed significant differences in the positive symptom scale and PANSS total between nAHs and pAHs groups. Four cytokines (BDNF, IL-2, NGF-β and TNF-α) differed significantly among the three groups. Six molecules in the nAHs group (phenylalanine, hippurate, serine, glutamate, valine and cystine) and four in the pAHs group (phenylalanine, serine, glutamate and cystine) were identified as potential biomarkers. In addition, phenylalanine was shown as a potential independent diagnostic biomarker for pAHs. Correlation analysis revealed that cystine and serine were significantly negatively correlated with IL-2 in the pAHs group.</p><p><strong>Conclusions: </strong>This study revealed the metabolic profile of patients with schizophrenia with AHs and provided new information to support the diagnosis. The identification of unique biomarkers would contribute to objective and reliable diagnoses of patients with schizophrenia with AH.</p>","PeriodicalId":50683,"journal":{"name":"Clinical and Investigative Medicine","volume":null,"pages":null},"PeriodicalIF":0.8,"publicationDate":"2022-06-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40398901","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Editor-In-Chief for Clinical and Investigative Medicine. 《临床与调查医学》主编。
IF 0.8 4区 医学 Q3 Medicine Pub Date : 2022-06-26 DOI: 10.25011/cim.v45i2.38850
The Canadian Society For Clinical Investigation Csci
The Canadian Society for Clinical Investigation (CSCI) is seeking an Editor-in-Chief for the Society's journal, "Clinical and Investigative Medicine". The Canadian Society for Clinical Investigation (CSCI) is seeking an Editor-in-Chief for the Society's journal, "Clinical and Investigative Medicine". If you are knowledgeable in the areas of clinical research that span disciplines from fundamental to clinical to population health, and you are keenly interested in encouraging the careers of young investigators, this may provide an exciting opportunity. Editor-in-Chief is an important role for the Society. Clinical and Investigative Medicine (CIM) is a well-established open-access peer-reviewed journal owned by CSCI. The person selected for this role will be responsible for choosing articles based on their scientific quality and for overseeing all aspects of their review and publication. The journal focuses on clinical and research articles that provide insights into the scientific basis for clinical disease processes. The journal also actively supports the careers of young investigators and encourages publication of their work. Five-year Impact Factor: 1.32 Citations: 1,200/year History: 1978-present Published: Four times annually ISSN: 1488-2353 (electronic) NLM ID: 7804071 Indexing: Index Medicus; Medline; and PubMed; v1n1, (1978) to present. Print issues v1n1- v29n5 (2006); electronic issues v30n1-v45n1 (present) Please contact CIM Manager rob@Gallaher.ca for more information.
加拿大临床研究学会(CSCI)现为其期刊《临床与调查医学》招聘总编辑。加拿大临床研究学会(CSCI)现为其期刊《临床与调查医学》招聘总编辑。如果您在从基础到临床再到人口健康的临床研究领域知识渊博,并且您对鼓励年轻研究人员的职业生涯非常感兴趣,这可能会提供一个令人兴奋的机会。总编辑是学会的重要角色。《临床与调查医学》(Clinical and Investigative Medicine, CIM)是CSCI旗下一份成熟的开放获取同行评议期刊。被选为该职位的人将负责根据其科学质量选择文章,并监督其审查和发表的各个方面。该杂志侧重于临床和研究文章,为临床疾病过程的科学基础提供见解。该杂志还积极支持年轻研究人员的职业生涯,并鼓励发表他们的工作。五年影响因子:1.32引文:1200 /年历史:1978年至今出版:每年四次ISSN: 1488-2353(电子)NLM ID: 7804071索引:Index Medicus;Medline;和PubMed;V1n1,(1978)至今。印刷版v1n1- v29n5 (2006);电子问题v30n1-v45n1(目前)更多信息请联系CIM经理rob@Gallaher.ca。
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引用次数: 0
Muscarinic Receptor Antagonism and Allergen Induced Airway Responses in Allergic Asthma: A Scoping Review. 毒蕈碱受体拮抗剂和过敏原诱导的过敏性哮喘气道反应:范围综述。
IF 0.8 4区 医学 Q3 Medicine Pub Date : 2022-06-26 DOI: 10.25011/cim.v45i2.38229
Beth E Davis, Kayla J Cropper, Donald W Cockcroft Cockcroft

Purpose: The purpose of this scoping review was to identify existing clinical and basic science knowledge surrounding the effect of muscarinic receptor antagonism on allergen-induced airway responses to inform future clinical research in this area.

Methods: Multiple advanced searches were performed using the National Library of Medicine PubMed search engine. Each search began with two terms; for example, "atropine and asthma" or "tiotropium and airway inflammation". Results were then further refined to include terms such as "allergen" or "ovalbumin (OVA)". Abstracts of refined searches were reviewed for relevance to allergic asthma and allergen-induced airway responses including the early and late asthmatic responses, airway inflammation and tissue remodelling. There was no restriction regarding publication date. Reference lists of selected papers were also reviewed for relevant publications.

Results: Nine human clinical trial publications and fourteen animal model publications were identified. In humans, single dose atropine (n=4), ipratropium (n=4) or oxitropium (n=1) administered pre-challenge produced equivocal effects on allergen-induced early asthmatic responses as reported but favored inhibition in eight of nine studies after re-analyses. Animal model investigations (n=14) showed mostly favorable results, especially with respect to airway inflammation and tissue remodelling, although two studies were negative, and one study showed a worsening in allergen induced airway inflammation following muscarinic receptor antagonism.

Conclusion: Existing human and animal model data suggest muscarinic receptor antagonism may be beneficial in preventing allergen induced airway responses in those with allergic asthma. Additional human research utilizing current standardized methodologies is required.

目的:本综述的目的是确定现有的临床和基础科学知识,围绕毒蕈碱受体拮抗剂对过敏原诱导的气道反应的影响,为该领域未来的临床研究提供信息。方法:使用国家医学图书馆PubMed搜索引擎进行多次高级搜索。每次搜索都以两个词开始;例如,“阿托品和哮喘”或“噻托溴铵和气道炎症”。结果进一步细化,包括“过敏原”或“卵白蛋白(OVA)”等术语。摘要综述了精细化搜索与过敏性哮喘和过敏原诱导的气道反应的相关性,包括早期和晚期哮喘反应、气道炎症和组织重构。对出版日期没有限制。还审查了选定论文的参考文献清单,以供有关出版物参考。结果:确定了9篇人类临床试验出版物和14篇动物模型出版物。在人类中,单剂量阿托品(n=4)、异丙托品(n=4)或奥氧托品(n=1)预激发对过敏原诱导的早期哮喘反应产生模棱两可的影响,但在重新分析后的9项研究中有8项有利于抑制。动物模型研究(n=14)显示了大多数有利的结果,特别是在气道炎症和组织重塑方面,尽管有两项研究是阴性的,一项研究显示在毒蕈碱受体拮抗剂后过敏原诱导的气道炎症恶化。结论:现有的人和动物模型数据表明,毒蕈碱受体拮抗剂可能有助于预防变应性哮喘患者的过敏原诱导的气道反应。需要利用目前的标准化方法进行更多的人体研究。
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引用次数: 1
Screening for Immune-Related RNA Biomarkers of Aneurysmal Subarachnoid Hemorrhage. 动脉瘤性蛛网膜下腔出血免疫相关RNA生物标志物的筛选。
IF 0.8 4区 医学 Q3 Medicine Pub Date : 2022-06-26 DOI: 10.25011/cim.v45i2.38449
Lin Cheng, Yun Zhao, Hong Ke

Purpose: Through comprehensive bioinformatics analysis based on the immune microenvironment, this study aimed to identify immune-related RNA biomarkers that indicate aneurysmal subarachnoid hemorrhage (aSAH).

Methods: The GSE73378 dataset was downloaded from the National Center for Biotechnology Information GEO database, providing blood from 107 normal controls and 103 patients with aSAH. The immune infiltration types in the aSAH blood samples were assessed and RNAs that were differentially expressed (DE) between 1) the aSAH and control groups and 2) the immune infiltration groups (high and low) were identified. The intersecting genes were subjected to weighted gene co-expression network analysis followed by co-expression network construction. The aSAH-related genes and pathways were identified from the Comparative Toxicogenomics Database: update 2019.

Results: A total of three DE long non-coding RNAs (lncRNAs) and 301 DE mRNAs were identified. Of the 301 mRNAs, 91 were significantly enriched in three modules. Based on the 91 mRNAs and three lncRNAs, a co-expression network related to the disease pathway was constructed. This pathway consisted of 16 factors, including the 13 mRNAs (e.g., TNFSF13B, TNFSF10, MYD88, GNA12 and NSMAF) and three lncRNAs (FAM66A, LINC00954 and CELF2-AS2), as well as six pathways, including the NF-κB, toll-like receptor, and sphingolipid signalling pathways.

Conclusion: TNFSF13B, MYD88, GNA12, NSMAF, FAM66A, LINC00954 and CELF2-AS2 may serve as biomarkers for aSAH. The NF-κB, toll-like receptor and sphingolipid signalling pathways may play critical roles in the progression of aSAH.

目的:通过基于免疫微环境的综合生物信息学分析,寻找提示动脉瘤性蛛网膜下腔出血(aSAH)的免疫相关RNA生物标志物。方法:从国家生物技术信息中心GEO数据库下载GSE73378数据集,提供107例正常对照和103例aSAH患者的血液。评估aSAH血液样本中的免疫浸润类型,并鉴定1)aSAH与对照组和2)免疫浸润组(高浸润组和低浸润组)差异表达的rna (DE)。对交叉基因进行加权共表达网络分析,构建共表达网络。从比较毒物基因组学数据库中确定了asah相关基因和途径:2019年更新。结果:共鉴定出3个DE长非编码rna (lncRNAs)和301个DE mrna。在301个mrna中,有91个在三个模块中显著富集。基于91个mrna和3个lncrna,构建了与疾病通路相关的共表达网络。该通路由16个因子组成,包括13个mrna(如TNFSF13B、TNFSF10、MYD88、GNA12和NSMAF)和3个lncrna (FAM66A、LINC00954和CELF2-AS2),以及6个通路,包括NF-κB、toll样受体和鞘脂信号通路。结论:TNFSF13B、MYD88、GNA12、NSMAF、FAM66A、LINC00954和CELF2-AS2可能是aSAH的生物标志物。NF-κB、toll样受体和鞘脂信号通路可能在aSAH的进展中起关键作用。
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引用次数: 0
Estimating Disease Prevalence in Administrative Data. 估算行政数据中的疾病患病率。
IF 0.8 4区 医学 Q3 Medicine Pub Date : 2022-06-26 DOI: 10.25011/cim.v45i2.38100
Jacek A Kopec

Purpose: Disease prevalence estimates from population-based administrative databases are often biased due to measurement (misclassification) errors. The purpose of this article is to review the methodology for estimating disease prevalence in administrative data, with a focus on bias correction.

Source: Several approaches to bias correction in administrative data were reviewed and application of these methods was demonstrated using an example from the literature: physician claims and hospitalization data were employed to estimate diabetes prevalence in Ontario, Canada.

Findings: Misclassification bias in prevalence estimates from administrative data can be reduced by developing and selecting an optimal algorithm for case identification, applying a bias correction formula, or using statistical modelling. An algorithm for which sensitivity equals positive predictive value provides an unbiased estimate of prevalence. Bias reduction methods generally require information about the measurement properties of the algorithm, such as sensitivity, specificity, or predictive value. These properties depend on disease type, prevalence, algorithm definition (including the observation window), and may vary by population and time. Prevalence estimates can be improved by applying multivariable disease prediction models.

Conclusion: Frequency of a positive case identification algorithm in administrative data is generally not equivalent to disease prevalence. Although prevalence estimates can be corrected for bias using known measurement properties of the algorithm, these properties may be difficult to estimate accurately; therefore, disease prevalence estimates based on administrative data must be treated with caution.

目的:基于人群的行政数据库的疾病患病率估计常常由于测量(误分类)错误而有偏差。本文的目的是回顾估算行政数据中疾病患病率的方法,重点是偏差校正。资料来源:本文回顾了几种对行政数据进行偏倚校正的方法,并以文献中的一个例子说明了这些方法的应用:采用医生索赔和住院数据来估计加拿大安大略省的糖尿病患病率。研究结果:通过开发和选择病例识别的最佳算法、应用偏差校正公式或使用统计建模,可以减少行政数据中患病率估计的错误分类偏差。灵敏度等于阳性预测值的算法提供了对患病率的无偏估计。偏倚减少方法通常需要有关算法测量特性的信息,例如灵敏度、特异性或预测值。这些属性取决于疾病类型、患病率、算法定义(包括观察窗口),并可能随人群和时间而变化。应用多变量疾病预测模型可以改进患病率估计。结论:行政数据中阳性病例识别算法的频率通常不等同于疾病患病率。虽然患病率估计可以使用算法的已知测量属性来纠正偏差,但这些属性可能难以准确估计;因此,必须谨慎对待基于行政数据的疾病患病率估计。
{"title":"Estimating Disease Prevalence in Administrative Data.","authors":"Jacek A Kopec","doi":"10.25011/cim.v45i2.38100","DOIUrl":"https://doi.org/10.25011/cim.v45i2.38100","url":null,"abstract":"<p><strong>Purpose: </strong>Disease prevalence estimates from population-based administrative databases are often biased due to measurement (misclassification) errors. The purpose of this article is to review the methodology for estimating disease prevalence in administrative data, with a focus on bias correction.</p><p><strong>Source: </strong>Several approaches to bias correction in administrative data were reviewed and application of these methods was demonstrated using an example from the literature: physician claims and hospitalization data were employed to estimate diabetes prevalence in Ontario, Canada.</p><p><strong>Findings: </strong>Misclassification bias in prevalence estimates from administrative data can be reduced by developing and selecting an optimal algorithm for case identification, applying a bias correction formula, or using statistical modelling. An algorithm for which sensitivity equals positive predictive value provides an unbiased estimate of prevalence. Bias reduction methods generally require information about the measurement properties of the algorithm, such as sensitivity, specificity, or predictive value. These properties depend on disease type, prevalence, algorithm definition (including the observation window), and may vary by population and time. Prevalence estimates can be improved by applying multivariable disease prediction models.</p><p><strong>Conclusion: </strong>Frequency of a positive case identification algorithm in administrative data is generally not equivalent to disease prevalence. Although prevalence estimates can be corrected for bias using known measurement properties of the algorithm, these properties may be difficult to estimate accurately; therefore, disease prevalence estimates based on administrative data must be treated with caution.</p>","PeriodicalId":50683,"journal":{"name":"Clinical and Investigative Medicine","volume":null,"pages":null},"PeriodicalIF":0.8,"publicationDate":"2022-06-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40398900","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Association Between ESR1 XBAI and Breast Cancer Susceptibility: A Systematic Review and Meta-Analysis. ESR1 XBAI与乳腺癌易感性之间的关系:一项系统综述和荟萃分析。
IF 0.8 4区 医学 Q3 Medicine Pub Date : 2022-03-23 DOI: 10.25011/cim.v45i1.37842
Tongyou Sunemail, R. Lian, Xiujun Liang, Dayong Sun
PURPOSEEstrogen receptor 1 (ESR1) XbaI polymorphisms may affect breast cancer susceptibility; however, the results of previously published studies are inconsistent. This meta-analysis aimed to investigate the relationship between ESR1 XbaI polymorphism and breast cancer risk.  Methods: Articles from the PubMed, Embase, Cochrane Library, WoS, Scopus, Wanfang Data, CNKI, CBM and CQVIP databases were systematically searched to determine the association between ESR1 XbaI polymorphism and breast cancer risk. The pooled results were assessed using odds ratios (ORs) and 95% confidence intervals (CIs), followed by subgroup analysis.  Results: Twenty-two studies involving 12,821 cases and 14,739 control subjects were analyzed. The pooled results indicated that ESR1 XbaI polymorphism may decrease risk of breast cancer in AG vs. AA (co-dominant model: OR = 0.88, 95% CI = 0.79-0.97, P = 0.015) and AG + GG vs. AA models (dominant model: OR = 0.89, 95% CI = 0.80-0.98, P = 0.022). Subgroup analysis indicated significant associations between the ESR1 XbaI polymorphism and breast cancer risk were observed in Asian subjects, non-Hardy-Weinberg equilibrium study, post-menopausal status and hospital-based subgroups under the AG vs. AA and AG + GG vs. AA models (all P < 0.05).  Conclusions: Our analysis of pooled data indicated that AG genotype in ESR1 XbaI may be a protective factor for breast cancer patients in some subgroups.
目的雌激素受体1 (ESR1) XbaI基因多态性可能影响乳腺癌易感性;然而,之前发表的研究结果并不一致。本荟萃分析旨在探讨ESR1 XbaI多态性与乳腺癌风险之间的关系。方法:系统检索PubMed、Embase、Cochrane Library、WoS、Scopus、万方数据、CNKI、CBM、CQVIP等数据库的文章,确定ESR1 XbaI多态性与乳腺癌风险的关系。采用优势比(ORs)和95%置信区间(ci)对合并结果进行评估,然后进行亚组分析。结果:共纳入22项研究,共纳入12821例病例和14739例对照。合并结果显示,ESR1 XbaI多态性可降低AG与AA(共显性模型:OR = 0.88, 95% CI = 0.79-0.97, P = 0.015)和AG + GG与AA(显性模型:OR = 0.89, 95% CI = 0.80-0.98, P = 0.022)的乳腺癌风险。亚组分析显示,在亚洲受试者、非hardy - weinberg平衡研究、绝经后状态和基于医院的AG与AA模型、AG + GG与AA模型的亚组中,ESR1 XbaI多态性与乳腺癌风险之间存在显著相关性(均P < 0.05)。结论:我们对汇总数据的分析表明,ESR1 XbaI中的AG基因型可能是某些亚组乳腺癌患者的保护因素。
{"title":"Association Between ESR1 XBAI and Breast Cancer Susceptibility: A Systematic Review and Meta-Analysis.","authors":"Tongyou Sunemail, R. Lian, Xiujun Liang, Dayong Sun","doi":"10.25011/cim.v45i1.37842","DOIUrl":"https://doi.org/10.25011/cim.v45i1.37842","url":null,"abstract":"PURPOSE\u0000Estrogen receptor 1 (ESR1) XbaI polymorphisms may affect breast cancer susceptibility; however, the results of previously published studies are inconsistent. This meta-analysis aimed to investigate the relationship between ESR1 XbaI polymorphism and breast cancer risk.  Methods: Articles from the PubMed, Embase, Cochrane Library, WoS, Scopus, Wanfang Data, CNKI, CBM and CQVIP databases were systematically searched to determine the association between ESR1 XbaI polymorphism and breast cancer risk. The pooled results were assessed using odds ratios (ORs) and 95% confidence intervals (CIs), followed by subgroup analysis.  Results: Twenty-two studies involving 12,821 cases and 14,739 control subjects were analyzed. The pooled results indicated that ESR1 XbaI polymorphism may decrease risk of breast cancer in AG vs. AA (co-dominant model: OR = 0.88, 95% CI = 0.79-0.97, P = 0.015) and AG + GG vs. AA models (dominant model: OR = 0.89, 95% CI = 0.80-0.98, P = 0.022). Subgroup analysis indicated significant associations between the ESR1 XbaI polymorphism and breast cancer risk were observed in Asian subjects, non-Hardy-Weinberg equilibrium study, post-menopausal status and hospital-based subgroups under the AG vs. AA and AG + GG vs. AA models (all P < 0.05).  Conclusions: Our analysis of pooled data indicated that AG genotype in ESR1 XbaI may be a protective factor for breast cancer patients in some subgroups.","PeriodicalId":50683,"journal":{"name":"Clinical and Investigative Medicine","volume":null,"pages":null},"PeriodicalIF":0.8,"publicationDate":"2022-03-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"83000104","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Clinical and Investigative Medicine
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