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Genome-scale chromatin binding dynamics of RNA Polymerase II general transcription machinery components. RNA 聚合酶 II 一般转录机制组件的基因组尺度染色质结合动力学。
Pub Date : 2024-04-02 DOI: 10.1038/s44318-024-00089-2
K. Kupkova, S. Shetty, Elizabeth A. Hoffman, Stefan Bekiranov, D. Auble
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引用次数: 0
ARGONAUTE10 controls cell fate specification and formative cell divisions in the Arabidopsis root. ARGONAUTE10控制拟南芥根的细胞命运规格和形成细胞分裂。
Pub Date : 2024-04-02 DOI: 10.1038/s44318-024-00072-x
Nabila El Arbi, Ann-Kathrin Schürholz, Marlene U Handl, Alexei Schiffner, Inés Hidalgo Prados, Liese Schnurbusch, Christian Wenzl, Xin'Ai Zhao, Jian Zeng, J. Lohmann, Sebastian Wolf
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引用次数: 1
A POTluck of peptide transporters. 多肽转运蛋白的杂烩。
IF 11.4 Pub Date : 2012-08-15 Epub Date: 2012-07-27 DOI: 10.1038/emboj.2012.206
Poul Nissen
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引用次数: 1
Hypertrophic growth in cardiac myocytes is mediated by Myc through a Cyclin D2-dependent pathway. 心肌细胞的肥厚生长是由Myc通过细胞周期蛋白d2依赖性途径介导的。
IF 11.4 Pub Date : 2006-08-23 Epub Date: 2006-08-10 DOI: 10.1038/sj.emboj.7601252
Weiguang Zhong, Songyan Mao, Scott Tobis, Ekaterini Angelis, Maria C Jordan, Kenneth P Roos, Michael C Fishbein, Ignacio Moreno de Alborán, W Robb MacLellan

c-Myc (Myc) is highly expressed in developing embryos where it regulates body size by controlling proliferation but not cell size. However, Myc is also induced in many postmitotic tissues, including adult myocardium, in response to stress where the predominant form of growth is an increase in cell size (hypertrophy) and not number. The function of Myc induction in this setting is unproven. Therefore, to explore Myc's role in hypertrophic growth, we created mice where Myc can be inducibly inactivated, specifically in adult myocardium. Myc-deficient hearts demonstrated attenuated stress-induced hypertrophic growth, secondary to a reduction in cell growth of individual myocytes. To explore the dependence of Myc-induced cell growth on CycD2, we created bigenic mice where Myc can be selectively activated in CycD2-null adult myocardium. Myc-dependent hypertrophic growth and cell cycle reentry is blocked in CycD2-deficient hearts. However, in contrast to Myc-induced DNA synthesis, hypertrophic growth is independent of CycD2-induced Cdk2 activity. These data suggest that Myc is required for a normal hypertrophic response and that its growth-promoting effects are also mediated through a CycD2-dependent pathway.

c-Myc (Myc)在发育中的胚胎中高度表达,它通过控制增殖而不是细胞大小来调节体型。然而,Myc也在许多有丝分裂后组织中被诱导,包括成人心肌,在应激反应中,主要的生长形式是细胞大小的增加(肥大)而不是数量的增加。在这种情况下,Myc诱导的功能尚未得到证实。因此,为了探索Myc在肥厚性生长中的作用,我们创建了Myc可以诱导灭活的小鼠,特别是在成人心肌中。myc缺陷心脏表现出应力诱导的肥厚生长减弱,继发于单个肌细胞的细胞生长减少。为了探索Myc诱导的细胞生长对CycD2的依赖性,我们创建了双基因小鼠,其中Myc可以在CycD2缺失的成人心肌中选择性激活。在cycd2缺陷的心脏中,myc依赖性肥厚生长和细胞周期再进入被阻断。然而,与myc诱导的DNA合成相反,肥厚性生长不依赖于cycd2诱导的Cdk2活性。这些数据表明Myc是正常肥厚反应所必需的,其促进生长的作用也通过cycd2依赖性途径介导。
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引用次数: 110
LppX is a lipoprotein required for the translocation of phthiocerol dimycocerosates to the surface of Mycobacterium tuberculosis. LppX是一种脂蛋白,是将硫代苯酚二根霉酸酯转运到结核分枝杆菌表面所必需的。
IF 11.4 Pub Date : 2006-04-05 Epub Date: 2006-03-16 DOI: 10.1038/sj.emboj.7601048
Gerlind Sulzenbacher, Stéphane Canaan, Yann Bordat, Olivier Neyrolles, Gustavo Stadthagen, Véronique Roig-Zamboni, Jean Rauzier, Damien Maurin, Françoise Laval, Mamadou Daffé, Christian Cambillau, Brigitte Gicquel, Yves Bourne, Mary Jackson

Cell envelope lipids play an important role in the pathogenicity of mycobacteria, but the mechanisms by which they are transported to the outer membrane of these prokaryotes are largely unknown. Here, we provide evidence that LppX is a lipoprotein required for the translocation of complex lipids, the phthiocerol dimycocerosates (DIM), to the outer membrane of Mycobacterium tuberculosis. Abolition of DIM transport following disruption of the lppX gene is accompanied by an important attenuation of the virulence of the tubercle bacillus. The crystal structure of LppX unveils an U-shaped beta-half-barrel dominated by a large hydrophobic cavity suitable to accommodate a single DIM molecule. LppX shares a similar fold with the periplasmic molecular chaperone LolA and the outer membrane lipoprotein LolB, which are involved in the localization of lipoproteins to the outer membrane of Gram-negative bacteria. Based on the structure and although an indirect participation of LppX in DIM transport cannot yet be ruled out, we propose LppX to be the first characterized member of a family of structurally related lipoproteins that carry lipophilic molecules across the mycobacterial cell envelope.

细胞包膜脂在分枝杆菌的致病性中起重要作用,但它们被运输到这些原核生物的外膜的机制在很大程度上是未知的。在这里,我们提供的证据表明,LppX是一种脂蛋白所需的转运复杂的脂质,邻苯二酚二真菌酸酯(DIM),到结核分枝杆菌的外膜。随着lppX基因的破坏,DIM转运的取消伴随着结核杆菌毒力的重要衰减。LppX的晶体结构为u形β -半桶状,由一个适合容纳单个DIM分子的大疏水腔主导。LppX与质周分子伴侣LolA和外膜脂蛋白LolB有相似的折叠,它们参与了革兰氏阴性菌的脂蛋白外膜定位。基于其结构,尽管还不能排除LppX间接参与DIM运输的可能性,但我们认为LppX是一个结构相关的脂蛋白家族的第一个特征成员,该家族携带亲脂分子穿过分枝杆菌细胞包膜。
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引用次数: 123
Subtelomeric proteins negatively regulate telomere elongation in budding yeast. 芽殖酵母的亚端粒蛋白负向调控端粒伸长。
IF 11.4 Pub Date : 2006-02-22 Epub Date: 2006-02-09 DOI: 10.1038/sj.emboj.7600975
Anne-Sophie Berthiau, Krassimir Yankulov, Amadou Bah, Emmanuelle Revardel, Pierre Luciano, Raymund J Wellinger, Vincent Géli, Eric Gilson

The Tbf1 and Reb1 proteins are present in yeast subtelomeric regions. We establish in this work that they inhibit telomerase-dependent lengthening of telomere. For example, tethering the N-terminal domain of Tbf1 and Reb1 in a subtelomeric region shortens that telomere proportionally to the number of domains bound. We further identified a 90 amino-acid long sequence within the N-terminal domain of Tbf1 that is necessary but not sufficient for its length regulation properties. The role of the subtelomeric factors in telomere length regulation is antagonized by TEL1 and does not correlate with a global telomere derepression. We show that the absence of TEL1 induces an alteration in the structure of telomeric chromatin, as defined biochemically by an increased susceptibility to nucleases and a greater heterogeneity of products. We propose that the absence of TEL1 modifies the organization of the telomeres, which allows Tbf1 and Reb1 to cis-inhibit telomerase. The involvement of subtelomeric factors in telomere length regulation provides a possible mechanism for the chromosome-specific length setting observed at yeast and human telomeres.

Tbf1和Reb1蛋白存在于酵母亚端粒区。我们在这项工作中建立了它们抑制端粒酶依赖的端粒延长。例如,将Tbf1和Reb1的n端结构域系在亚端粒区域会使端粒与结合的结构域数量成比例地缩短。我们进一步在Tbf1的n端域中发现了一个90个氨基酸的长序列,这对其长度调节特性是必要的,但不是充分的。亚端粒因子在端粒长度调节中的作用被TEL1拮抗,与整体端粒抑制无关。我们发现,TEL1的缺失会引起端粒染色质结构的改变,这在生物化学上被定义为对核酸酶的易感性增加和产物的更大异质性。我们认为,TEL1的缺失改变了端粒的组织,这使得Tbf1和Reb1能够顺式抑制端粒酶。亚端粒因子参与端粒长度调节为在酵母和人类端粒中观察到的染色体特异性长度设置提供了可能的机制。
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引用次数: 67
Actin gene mutations in Drosophila; heat shock activation in the indirect flight muscles. 果蝇肌动蛋白基因突变;间接飞行肌肉的热休克激活。
IF 11.4 Pub Date : 1985-07-01 DOI: 10.1002/j.1460-2075.1985.tb03837.x
Y Hiromi, Y Hotta

We have identified four mutations affecting the actin III isoform in the indirect flight muscles (IFM) of Drosophila. One mutation does not produce any protein product, and three direct the synthesis of electrophoretic variants of actin. Complementation tests and recombination mapping indicate that all mutations are alleles of an actin gene at chromosomal band 88F (act88F gene). The effect of these mutations is restricted to the IFM. We conclude that the act88F gene is expressed only in the IFM to encode actin III, which is its major isoform. In two of the actin mutants, heat shock proteins are constitutively expressed in the IFM. Genetic evidence strongly suggest that this anomaly is primarily caused by the mutations in the act88F structural gene.

我们已经确定了影响果蝇间接飞行肌(IFM)中肌动蛋白III亚型的四个突变。一个突变不产生任何蛋白质产物,三个直接合成肌动蛋白的电泳变体。互补测试和重组定位表明,所有突变均为染色体88F带肌动蛋白基因(act88F基因)的等位基因。这些突变的影响仅限于IFM。我们得出结论,act88F基因仅在IFM中表达以编码肌动蛋白III,这是其主要亚型。在两个肌动蛋白突变体中,热休克蛋白在IFM中组成性表达。遗传证据强烈表明,这种异常主要是由act88F结构基因突变引起的。
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引用次数: 105
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The EMBO Journal
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