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The Nick Norgan Award 2023. 2023 年尼克-诺根奖
IF 1.7 4区 医学 Q2 ANTHROPOLOGY Pub Date : 2023-02-01 Epub Date: 2024-01-10 DOI: 10.1080/03014460.2023.2298113
Rachel Deevey
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引用次数: 0
Cadmium exposure is associated with chronic kidney disease in a superfund site lead smelter community in Dallas, Texas. 在德克萨斯州达拉斯市的一个铅冶炼厂社区,镉暴露与慢性肾病有关。
IF 1.7 4区 医学 Q2 ANTHROPOLOGY Pub Date : 2023-02-01 DOI: 10.1080/03014460.2023.2236017
Bert B Little, Giang T Vu, Brad Walsh

Background: The study was conducted in a Dallas lead smelter community following an Environmental Protection Agency (EPA) Superfund Cleanup project. Lead smelters operated in the Dallas community since the mid-1930s.Aim: To test the hypothesis that cadmium (Cd) exposure is associated with chronic kidney disease (CKD) ≥ stage 3.Subjects and methods: Subjects were African American residents aged ≥19 to ≤ 89 years (n=835). CKD ≥ stage 3 was predicted by blood Cd concentration with covariates.Results: In logistic regression analysis, CKD ≥ stage 3 was predicted by age ≥ 50 years (OR = 4.41, p < 0.0001), Cd level (OR = 1.89, p < .05), hypertension (OR = 3.15, p < 0.03), decades living in the community (OR = 1.34, p < 0.003) and T2DM (OR = 2.51, p < 0.01). Meta-analysis of 11 studies of Cd and CKD ≥ stage 3 yielded an ORRANDOM of 1.40 (p < 0.0001). Chronic environmental Cd exposure is associated with CKD ≥ stage 3 in a Dallas lead smelter community controlling covariates.Conclusion: Public health implications include screening for heavy metals including Cd, cleanup efforts to remove Cd from the environment and treating CKD with newer renal-sparing medications (e.g., SGLT-2 inhibitors, GLP-1s).

背景:这项研究是在环境保护署(EPA)超级基金清理项目之后在达拉斯铅冶炼厂社区进行的。自20世纪30年代中期以来,达拉斯社区就开始经营铅冶炼厂。目的:验证镉(Cd)暴露与慢性肾病(CKD)≥3期相关的假设。研究对象和方法:研究对象为年龄≥19 ~≤89岁的非裔美国居民(n=835)。血Cd浓度与协变量预测CKD≥3期。结果:在logistic回归分析中,年龄≥50岁(OR = 4.41, p < 0.0001)、Cd水平(OR = 1.89, p < 0.05)、高血压(OR = 3.15, p < 0.03)、社区生活年限(OR = 1.34, p < 0.003)和T2DM (OR = 2.51, p < 0.01)预测CKD≥3期。对11项Cd和CKD≥3期研究的荟萃分析显示,ORRANDOM为1.40 (p < 0.0001)。在达拉斯铅冶炼厂社区控制协变量中,慢性环境镉暴露与CKD≥3期相关。结论:公共卫生影响包括重金属(包括Cd)的筛查,清除环境中Cd的努力,以及使用更新的肾脏保护药物(例如SGLT-2抑制剂,glp -1)治疗CKD。
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引用次数: 0
The association between daytime sleep and general obesity risk differs by sleep duration in Iranian adults. 在伊朗成年人中,白天睡眠与一般肥胖风险之间的关系因睡眠时长而异。
IF 1.7 4区 医学 Q2 ANTHROPOLOGY Pub Date : 2023-02-01 DOI: 10.1080/03014460.2023.2213479
Noushin Mohammadifard, Firoozeh Sajjadi, Fahimeh Haghighatdoost, Soraya Masoodi, Masoumeh Sadeghi, Hamidreza Roohafza, Maryam Maghroun, Hassan Alikhasi, Farzaneh Zamaneh, Parisa Zakeri, Simin Karimi, Nizal Sarrafzadegan

Background: Sleep duration and daytime napping and obesity are related to adiposity; however, it is not clear whether the association between daytime napping and adiposity measures can differ by sleep duration.

Aim: To clarify the association between daytime napping and general and abdominal obesity based on sleep duration of participants.

Subjects and methods: This cross-sectional study was conducted on 1,683 individuals (837 men and 846 women) aged ≥ 35 years. Height, weight and waist circumference (WC) were measured according to the standard protocols. Body mass index (BMI) was calculated. Self-reported sleep duration (in a 24-hour cycle) was recorded. The odds of general and abdominal obesity were compared between nappers and non-nappers, stratified by their sleep duration (≤ 6 h, 6-8 h, ≥ 8 h).

Results: The mean (SD) age of participants was 47.48 ± 9.35 years. Nappers with a short sleep duration (≤ 6 h) had greater BMI and higher risk for overweight/obesity compared with counterpart non-nappers after adjustment for potential confounders (OR = 1.61, 95% CI = 1.07-2.41). In subjects with moderate sleep duration (6-8 h), nappers had a tendency towards higher BMI in comparison with non-nappers (28.04 ± 0.25 vs. 26.93 ± 0.51 kg/m2; p = 0.05), however, no significant difference was observed for the risk of obesity. Daytime napping was not related to the risk of obesity in long sleepers. No significant association was observed for abdominal obesity measures.

Conclusions: Daytime napping is associated with increased risk of overweight/obesity in short sleepers. However, in subjects with longer sleep duration, it is not related to the risk of overweight/obesity.

背景:睡眠时间和白天午睡与肥胖有关;然而,目前还不清楚白天小睡和肥胖之间的联系是否会因睡眠时间的不同而不同。目的:根据参与者的睡眠时间,阐明白天午睡与一般肥胖和腹部肥胖之间的关系。对象和方法:本横断面研究纳入年龄≥35岁的1683人(男性837人,女性846人)。根据标准方案测量身高、体重和腰围(WC)。计算身体质量指数(BMI)。记录自我报告的睡眠时间(以24小时为周期)。根据睡眠时间(≤6小时,6-8小时,≥8小时)对午睡者和不午睡者进行一般肥胖和腹部肥胖的发生率进行比较。结果:参与者的平均(SD)年龄为47.48±9.35岁。调整潜在混杂因素后,睡眠时间短(≤6小时)的午睡者与不午睡者相比,BMI更高,超重/肥胖风险更高(OR = 1.61, 95% CI = 1.07-2.41)。在中等睡眠时间(6-8小时)的受试者中,午睡者与不午睡者相比有更高BMI的趋势(28.04±0.25 vs. 26.93±0.51 kg/m2;P = 0.05),但肥胖风险无显著差异。白天小睡与长睡眠者肥胖的风险无关。腹部肥胖测量没有观察到显著的关联。结论:白天小睡与短睡眠者超重/肥胖的风险增加有关。然而,在睡眠时间较长的受试者中,它与超重/肥胖的风险无关。
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引用次数: 0
Haplotypic polymorphisms and forensic applications in Chinese Hunan Han population based on a series of Y-STR loci: a perspective of paternal inheritance. 基于一系列Y-STR位点的中国湖南汉族人群单倍型多态性及其法医学应用:父系遗传的视角
IF 1.7 4区 医学 Q2 ANTHROPOLOGY Pub Date : 2023-02-01 DOI: 10.1080/03014460.2023.2171120
Ming Zhao, Wei Cui, Yunying Zhang, Qiong Lan, Bofeng Zhu

Background: Hunan, a multinational province in China, possesses more than fifty ethnic groups, such as the Han, Yao, Tujia, Miao, and so on.

Aims: To evaluate the forensic efficiency of the novel panel and investigate the genetic relationships between Hunan Han population and 12 other reference populations from China.

Subjects and methods: Haplotypic data of 153 unrelated males of Hunan Han population were investigated using the AGCU Y SUPP Plus amplification system containing 27 Y-chromosomal short tandem repeat (STR) loci. Forensic parameters were calculated to evaluate the application efficiency of this panel in Hunan Han population.

Results: Haplotype diversity, discrimination capability, and match probability values were 0.9999999977, 1.0000, and 0.0065, respectively. Pairwise fixation index values demonstrated that the minimal genetic differentiation (0.0073) was found between Hunan Han population and Hunan Yao group, while the maximal genetic differentiation (0.0651) was observed between Hunan Han and Guangxi Yao group from the perspective of the patrilineal DNA analysis.

Conclusions: The haplotype distributions of 27 Y-STR loci in Hunan Han population exhibited remarkable polymorphisms. Moreover, this panel has potential advantages for the forensic applications regarding family investigations, paternity testing of the paternal line, and population genetics.

背景:湖南是中国的一个多民族省份,有汉族、瑶族、土家族、苗族等五十多个民族。目的:评价新群体的法医学鉴定效率,探讨湖南汉族群体与中国其他12个参考群体的遗传关系。对象与方法:采用AGCU Y SUPP Plus基因扩增系统对153名湖南汉族无亲缘关系男性进行单倍型分析,该系统包含27个Y染色体短串联重复(STR)位点。计算法医学参数,评价该面板在湖南汉族人群中的应用效率。结果:单倍型多样性值为0.9999999977,辨别能力值为1.0000,匹配概率值为0.0065。父系DNA分析结果显示,湖南汉族群体与湖南瑶族群体的遗传分化最小(0.0073),而湖南汉族与广西瑶族群体的遗传分化最大(0.0651)。结论:湖南汉族人群27个Y-STR基因座单倍型分布具有显著的多态性。此外,该小组在家庭调查,父系亲子鉴定和群体遗传学的法医应用方面具有潜在的优势。
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引用次数: 0
Genetic polymorphisms and phylogenetic characteristics of Tibeto-Burman-speaking Lahu population from southwest China based on 41 Y-STR loci. 基于41个Y-STR位点的中国西南藏缅语系拉祜族群体遗传多态性及系统发育特征
IF 1.7 4区 医学 Q2 ANTHROPOLOGY Pub Date : 2023-02-01 DOI: 10.1080/03014460.2023.2171123
Chongchong Xu, Wei Wei, Mingxin Zuo, Wu Zuo, Kuan Li, Xinqing Lian, Shixu Wang, Xuemei Zhou, Xiufeng Zhang, Shurong Zhong

Background: Male sex-linked Y-chromosome short tandem repeats (Y-STRs) have been widely used in forensic cases and population genetics research. At present, the forensic-related Y-STR data in the Chinese Lahu population are still poorly understood.

Aim: To enrich the available Y-STR data of this Chinese minority population and investigate its phylogenetic relationships with other reported populations.

Subjects and methods: The genetic polymorphisms of 41 Y-STR loci were analysed in 299 unrelated healthy Lahu male individuals from Southwest China. Phylogenetic analyses were performed by multidimensional scaling analysis and neighbor-joining phylogenetic tree construction.

Results: A total of 379 alleles were observed at the 41 Y-STR loci. The allele frequencies ranged from 0.0033 to 0.9666. The genetic diversity values ranged from 0.0653 to 0.9072. A total of 254 different haplotypes of the 41 Y-STR loci were observed in 299 individuals. The values of haplotype diversity, haplotype match probability, and discrimination capacity were 0.9987, 0.0047, and 0.8495, respectively. The phylogenetic analysis indicated that the Tibeto-Burman-speaking Lahu population showed a close genetic relationship with the Yunnan Yi population.

Conclusions: The haplotype data of the present study can enrich the forensic databases of this Chinese minority population and will be useful for population genetics and forensic DNA application.

背景:男性性连锁y染色体短串联重复序列(Y-STRs)已广泛应用于法医案件和群体遗传学研究。目前,中国拉祜族人群的法医相关Y-STR数据仍然知之甚少。目的:丰富中国少数民族人群的Y-STR数据,探讨其与其他已报道人群的系统发育关系。对象和方法:对299例无亲缘关系拉祜族健康男性进行41个Y-STR基因座遗传多态性分析。系统发育分析采用多维尺度分析和邻居连接系统发育树构建。结果:41个Y-STR位点共检测到379个等位基因。等位基因频率范围为0.0033 ~ 0.9666。遗传多样性值为0.0653 ~ 0.9072。在299个个体中共观察到41个Y-STR基因座的254个不同的单倍型。单倍型多样性、单倍型匹配概率和辨别能力分别为0.9987、0.0047和0.8495。系统发育分析表明,藏缅语系拉祜族与云南彝族有密切的亲缘关系。结论:本研究的单倍型数据可丰富中国少数民族人群的法医数据库,对群体遗传学和法医DNA应用具有重要意义。
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引用次数: 1
Unveiling genetic diversity and forensic utility of SureID® human DNA identification kits: a comprehensive analysis of 44 autosomal STR loci in English and Irish populations. 揭示SureID®人类DNA鉴定试剂盒的遗传多样性和法医实用性:对英国和爱尔兰人群中44个常染色体STR基因座的综合分析。
IF 1.7 4区 医学 Q2 ANTHROPOLOGY Pub Date : 2023-02-01 Epub Date: 2023-10-10 DOI: 10.1080/03014460.2023.2265814
Sasitaran Iyavoo, Jessica Perry, Simon Knights, Michalis Mavrommatis, Tatiana Petrova, Abigail Bevan, Stephen Cummings, Sharlize Pedroza Matute, Danlu Song, Thomas Haizel

Background: Human identification and kinship testing in forensic science rely on Short Tandem Repeat (STR) multiplex kits, typically containing loci recommended by standard sets. However, complementary kits with additional STR loci can be valuable in complex cases. Allele frequency databases specific to the population are essential for accurate forensic analysis.Aim: This study aimed to generate allele frequencies and population genetic data for 44 autosomal STR loci from SureID® PanGlobal and 27comp kits in English and Irish populations for forensic casework, human identification, and kinship testing.Subjects and methods: Buccal swab samples from 645 White Caucasians (365 English, 280 Irish) were collected. DNA was extracted and amplified using the mentioned kits. Quality control, statistical analysis, and genetic distance calculations were performed.Results: Both kits demonstrated robustness with no significant deviations from Hardy-Weinberg Equilibrium (HWE). Variant alleles and minor discordances between kits were observed. Syntenic STR pairs were identified but showed no significant linkage. A close genetic relationship was found between English and Irish populations, allowing for combined databases.Conclusions: The SureID® PanGlobal and 27comp kits showed high discriminatory power and reliability in the English and Irish populations. Care is needed when handling variant alleles, discordances, and syntenic loci. Combining data from both populations is feasible for a comprehensive database. Further studies are required to explore their effectiveness in diverse populations.

背景:法医学中的人类鉴定和亲缘关系检测依赖于短串联重复序列(STR)多重试剂盒,通常包含标准集推荐的基因座。然而,具有额外STR基因座的互补试剂盒在复杂情况下可能很有价值。特定人群的等位基因频率数据库对于准确的法医学分析至关重要。目的:本研究旨在从英国和爱尔兰人群中的SureID®PanGlobal和27comp试剂盒中生成44个常染色体STR基因座的等位基因频率和群体遗传数据,用于法医案例工作、人类鉴定和亲属关系测试。受试者和方法:采集645名白人高加索人(365名英国人,280名爱尔兰人)的颊拭子样本。使用上述试剂盒提取并扩增DNA。进行质量控制、统计分析和遗传距离计算。结果:两个试剂盒都表现出了稳健性,与Hardy-Weinberg平衡(HWE)没有显著偏差。观察到变异等位基因和试剂盒之间的微小不一致。已鉴定出同源STR对,但没有显示出显著的连锁。在英国和爱尔兰人口之间发现了密切的基因关系,从而可以建立联合数据库。结论:SureID®PanGlobal和27comp试剂盒在英国和爱尔兰人群中显示出较高的辨别力和可靠性。处理变异等位基因、不一致和同基因座时需要小心。将这两个群体的数据结合起来建立一个全面的数据库是可行的。需要进一步的研究来探索它们在不同人群中的有效性。
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引用次数: 0
Bioinformatics analysis of the potential mechanisms of Alzheimer's disease induced by exposure to combined triazine herbicides. 接触三嗪类除草剂诱发阿尔茨海默病潜在机制的生物信息学分析。
IF 1.7 4区 医学 Q2 ANTHROPOLOGY Pub Date : 2023-02-01 Epub Date: 2023-10-11 DOI: 10.1080/03014460.2023.2259242
Jianan Li, Ling Qi, Yuxin Chen, Haoming Lv, Haoran Bi

Background: The development of Alzheimer's disease (AD) is promoted by a combination of genetic and environmental factors. Notably, combined exposure to triazine herbicides atrazine (ATR), simazine (SIM), and propazine (PRO) may promote the development of AD, but the mechanism is unknown.

Aim: To study the molecular mechanism of AD induced by triazine herbicides.

Methods: Differentially expressed genes (DEGs) of AD patients and controls were identified. The intersectional targets of ATR, SIM, and PRO for possible associations with AD were screened through network pharmacology and used for gene ontology (GO) and Kyoto Encyclopaedia of Genes and Genomes (KEGG) enrichment analysis. The binding potentials between the core targets and herbicides were validated by molecular docking and molecular dynamics.

Results: A total of 1,062 DEGs were screened between the AD patients and controls, which identified 148 intersectional targets of herbicides causing AD that were screened by network pharmacology analysis. GO and KEGG enrichment analysis revealed that cell cycling and cellular senescence were important signalling pathways. Finally, the core targets EGFR, FN1, and TYMS were screened and validated by molecular docking and molecular dynamics.

Conclusion: Our results suggest that combined exposure to triazine herbicides might promote the development of AD, thereby providing new insights for the prevention of AD.

背景:阿尔茨海默病(AD)的发展是由遗传和环境因素共同推动的。值得注意的是,联合暴露于三嗪类除草剂阿特拉津(ATR)、西马嗪(SIM)和丙嗪(PRO)可能会促进AD的发展,但其机制尚不清楚。目的:研究三嗪类除草剂诱发AD的分子机制。方法:对AD患者和对照组的差异表达基因(DEGs)进行鉴定。通过网络药理学筛选ATR、SIM和PRO可能与AD相关的交叉靶标,并用于基因本体论(GO)和京都基因和基因组百科全书(KEGG)富集分析。通过分子对接和分子动力学验证了核心靶标与除草剂之间的结合潜力。结果:AD患者和对照组共筛选出1062个DEG,通过网络药理学分析筛选出148个除草剂引起AD的交叉靶标。GO和KEGG富集分析表明,细胞周期和细胞衰老是重要的信号通路。最后,通过分子对接和分子动力学对核心靶点EGFR、FN1和TYMS进行了筛选和验证。结论:三嗪类除草剂联合暴露可能促进AD的发展,为AD的预防提供了新的思路。
{"title":"Bioinformatics analysis of the potential mechanisms of Alzheimer's disease induced by exposure to combined triazine herbicides.","authors":"Jianan Li,&nbsp;Ling Qi,&nbsp;Yuxin Chen,&nbsp;Haoming Lv,&nbsp;Haoran Bi","doi":"10.1080/03014460.2023.2259242","DOIUrl":"10.1080/03014460.2023.2259242","url":null,"abstract":"<p><strong>Background: </strong>The development of Alzheimer's disease (AD) is promoted by a combination of genetic and environmental factors. Notably, combined exposure to triazine herbicides atrazine (ATR), simazine (SIM), and propazine (PRO) may promote the development of AD, but the mechanism is unknown.</p><p><strong>Aim: </strong>To study the molecular mechanism of AD induced by triazine herbicides.</p><p><strong>Methods: </strong>Differentially expressed genes (DEGs) of AD patients and controls were identified. The intersectional targets of ATR, SIM, and PRO for possible associations with AD were screened through network pharmacology and used for gene ontology (GO) and Kyoto Encyclopaedia of Genes and Genomes (KEGG) enrichment analysis. The binding potentials between the core targets and herbicides were validated by molecular docking and molecular dynamics.</p><p><strong>Results: </strong>A total of 1,062 DEGs were screened between the AD patients and controls, which identified 148 intersectional targets of herbicides causing AD that were screened by network pharmacology analysis. GO and KEGG enrichment analysis revealed that cell cycling and cellular senescence were important signalling pathways. Finally, the core targets EGFR, FN1, and TYMS were screened and validated by molecular docking and molecular dynamics.</p><p><strong>Conclusion: </strong>Our results suggest that combined exposure to triazine herbicides might promote the development of AD, thereby providing new insights for the prevention of AD.</p>","PeriodicalId":50765,"journal":{"name":"Annals of Human Biology","volume":"50 1","pages":"442-451"},"PeriodicalIF":1.7,"publicationDate":"2023-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41219362","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of orthodontic treatment on masticatory muscles activity: a meta-analysis. 正畸治疗对咀嚼肌活动的影响:一项荟萃分析。
IF 1.7 4区 医学 Q2 ANTHROPOLOGY Pub Date : 2023-02-01 Epub Date: 2023-11-06 DOI: 10.1080/03014460.2023.2271840
Yuxiang Zhan, Minjie Yang, Shuoqiu Bai, Siqin Zhang, Yunqin Huang, Fansheng Gong, Xiaolin Nong

Context: A comprehensive meta-analysis was carried out to investigate the impact of orthodontics on masticatory muscles.Methods: A thorough search of various databases, including CNKI, Wan Fang, VIP, CBM, MEDLINE, PubMed, Cochrane Library, EMBASE, Web of Science, and Google Scholar, was performed to identify relevant studies on patients undergoing orthodontics or functional corrections. Six case-control studies were finally included in this analysis, which specifically examined the effect of orthodontic treatment on masticatory muscle function.Results: The results revealed that the mean masticatory muscle voltage in patients treated with orthodontics was found to be higher after treatment compared to before treatment [odds ratio (OR)=1.57, 95% confidence interval (CI) (0.57, 2.57), p = 0.002], which could potentially have an impact on masticatory muscle function, particularly in individuals with Class II Division 1 malocclusion.Conclusion: These findings contribute to our understanding of the effects of orthodontic interventions on masticatory muscles, further highlighting the importance of orthodontics in optimising masticatory function.

背景:进行了一项全面的荟萃分析,以研究正畸对咀嚼肌的影响。方法:对CNKI、万方、VIP、CBM、MEDLINE、PubMed、Cochrane Library、EMBASE、Web of Science和Google Scholar等数据库进行全面检索,以确定对接受正畸或功能矫正的患者的相关研究。本分析最终纳入了六项病例对照研究,专门研究了正畸治疗对咀嚼肌功能的影响。结果:结果显示,接受正畸治疗的患者在治疗后的平均咀嚼肌电压高于治疗前[比值比(OR)=1.57,95%置信区间(CI)(0.57,2.57),p = 0.002],这可能对咀嚼肌功能产生潜在影响,尤其是对II类1类错牙合患者。结论:这些发现有助于我们理解正畸干预对咀嚼肌的影响,进一步强调正畸在优化咀嚼功能方面的重要性。
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引用次数: 0
Population genetic analysis of 12 X-STR markers in Slovakia. 斯洛伐克12个X-STR标记的群体遗传分析。
IF 1.7 4区 医学 Q2 ANTHROPOLOGY Pub Date : 2023-02-01 Epub Date: 2023-10-09 DOI: 10.1080/03014460.2023.2264769
Zdenko Červenák, Filip Červenák, Andrej Choma, Marián Baldovič, Soňa Masnicová

Background: During the last 20 years, X-chromosomal STR markers have become widely used in forensic genetics and paternity testing. Nevertheless, to exploit their full potential in any given population, a reliable reference dataset needs to be established. Since no relevant studies concerning these markers have been performed on the Slovak population so far, we decided to analyse several commonly used markers in this population.Aim: To create an informative set of Slovak population data concerning X-STR markers.Subjects and methods: We genotyped 378 individuals and analysed 12 loci (DXS10148, DX10135, DXS8378, DXS7132, DXS10079, DXS10074, DXS10103, HPRTB, DXS10101, DXS10146, DXS10134 and DXS742) localised in four distinct linkage groups.Results: Our analysis showed that the most informative marker is DXS10135 (PIC = 0,927) and the most informative linkage group (LG) is LG1 with 149 different haplotypes. This analysis also confirmed linkage disequilibrium for two pairs of markers (DX10101-DX10103 and DX10101-HPRTB) within LG3 in female samples. No statistically significant departure from HWE was observed for any locus. Moreover, the interpopulation comparison of 8 European populations based on haplotype frequencies showed no statistically significant FST values in any LG, except for LG2 in comparison with the German population.Conclusion: We created a haplotype database for forensic analyses and kinship testing in Slovakia, as well as the CE dataset which can be used to further increase the decision power in similar analyses in the future.

背景:过去20年 近年来,X染色体STR标记在法医遗传学和亲子鉴定中得到了广泛的应用。然而,为了在任何给定的人群中充分利用它们的潜力,需要建立一个可靠的参考数据集。由于到目前为止还没有对斯洛伐克人群进行有关这些标记的相关研究,我们决定分析该人群中几种常用的标记。目的:建立一套关于X-STR标记的斯洛伐克人群数据。受试者和方法:我们对378个个体进行了基因分型,并分析了定位在四个不同连锁群中的12个位点(DXS10148、DX10135、DXS8378、DXS7132、DXS10079、DXS1007 4、DXS10103、HPRTB、DXS10101、DXS10146、DXS10134和DXS742)。结果:我们的分析表明,信息量最大的标记是DXS10135(PIC=0927),信息量最多的连锁群(LG)是具有149种不同单倍型的LG1。该分析还证实了女性样本中LG3内两对标记物(DX10101-DX10103和DX10101-HPRTB)的连锁不平衡。在任何基因座中均未观察到与HWE有统计学意义的偏离。此外,基于单倍型频率对8个欧洲群体进行的群体间比较显示,除LG2与德国群体相比外,任何LG的FST值均无统计学意义。结论:我们在斯洛伐克创建了一个用于法医分析和亲属关系测试的单倍型数据库,以及CE数据集,该数据集可用于进一步提高未来类似分析的决策能力。
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引用次数: 0
Forensic characterisation and polymorphism analysis of 16 X-chromosomal STRs in the Jining Han population in Eastern China. 中国东部济宁汉族人群16个x染色体STRs的法医学特征及多态性分析
IF 1.7 4区 医学 Q2 ANTHROPOLOGY Pub Date : 2023-02-01 DOI: 10.1080/03014460.2023.2213478
Yequan Wang, Ao Gao, Xiudi Hou, Qi Liu, Dan Wang, Zhen Dang

Background: X-chromosomal short tandem repeats (X-STRs) are a useful supplementary approach to analysing autosomal markers in forensics and kinship studies; such markers are not well-characterised in many populations.

Aim: To investigate population genetic polymorphism and forensic characterisation of 16 X-STRs in the Jining Han population, and analyse genetic relationships with other Chinese populations.

Subjects and methods: Allele frequencies for 16 X-STR loci were obtained from a sample set of 527 unrelated individuals from the Jining Han population. Population genetic analyses of Jining Han and another 10 reference populations were conducted using phylogenetic tree, principal component analysis and multidimensional scaling.

Results: We detected 149 alleles, with frequencies ranging from 0.0013 to 0.8242. The combined powers of discrimination in males and females were 0.999999997194774 and 0.999999999999995, respectively. The combined mean exclusion change (MEC)Krüger, MECKishida, MECDesmarais, and MECDesmarais Duos values were 0.999974632649096, 0.999999976997582, 0.999999977013201, and 0.999993755768423, respectively. We detected relatively high genetic homogeneity in populations with similar ethnic or geographic origins, and a close relationship between the Jining Han and Beijing Han populations.

Conclusions: The present findings indicate that the 16 X-STR loci examined are highly polymorphic in the Han population of Jining, providing useful information for forensic science and population genetics studies.

背景:x染色体短串联重复序列(X-STRs)是法医和亲属研究中分析常染色体标记的有用补充方法;这些标记在许多人群中没有很好地表征。目的:研究济宁汉族人群中16个x - str的群体遗传多态性和法医学鉴定,并分析其与其他中国人群的遗传关系。对象和方法:从济宁汉族人群527例无亲缘关系个体中获得16个X-STR基因座的等位基因频率。采用系统发育树、主成分分析和多维标度法对济宁汉和另外10个参考群体进行了群体遗传分析。结果:共检测到149个等位基因,频率范围为0.0013 ~ 0.8242。男性和女性的综合歧视力分别为0.999999997194774和0.99999999999999995。合并MEC kr格、MECKishida、MECDesmarais和MECDesmarais Duos值分别为0.999974632649096、0.999999976997582、0.99999999977013201和0.999993755768423。在具有相似民族或地理来源的人群中,我们发现了相对较高的遗传同质性,并且在济宁汉族和北京汉族人群之间存在密切的关系。结论:16个X-STR基因座在济宁汉族人群中具有高度多态性,为法医学和群体遗传学研究提供了有益的信息。
{"title":"Forensic characterisation and polymorphism analysis of 16 X-chromosomal STRs in the Jining Han population in Eastern China.","authors":"Yequan Wang,&nbsp;Ao Gao,&nbsp;Xiudi Hou,&nbsp;Qi Liu,&nbsp;Dan Wang,&nbsp;Zhen Dang","doi":"10.1080/03014460.2023.2213478","DOIUrl":"https://doi.org/10.1080/03014460.2023.2213478","url":null,"abstract":"<p><strong>Background: </strong>X-chromosomal short tandem repeats (X-STRs) are a useful supplementary approach to analysing autosomal markers in forensics and kinship studies; such markers are not well-characterised in many populations.</p><p><strong>Aim: </strong>To investigate population genetic polymorphism and forensic characterisation of 16 X-STRs in the Jining Han population, and analyse genetic relationships with other Chinese populations.</p><p><strong>Subjects and methods: </strong>Allele frequencies for 16 X-STR loci were obtained from a sample set of 527 unrelated individuals from the Jining Han population. Population genetic analyses of Jining Han and another 10 reference populations were conducted using phylogenetic tree, principal component analysis and multidimensional scaling.</p><p><strong>Results: </strong>We detected 149 alleles, with frequencies ranging from 0.0013 to 0.8242. The combined powers of discrimination in males and females were 0.999999997194774 and 0.999999999999995, respectively. The combined mean exclusion change (MEC)<sub>Krüger</sub>, MEC<sub>Kishida</sub>, MEC<sub>Desmarais</sub>, and MEC<sub>Desmarais Duos</sub> values were 0.999974632649096, 0.999999976997582, 0.999999977013201, and 0.999993755768423, respectively. We detected relatively high genetic homogeneity in populations with similar ethnic or geographic origins, and a close relationship between the Jining Han and Beijing Han populations.</p><p><strong>Conclusions: </strong>The present findings indicate that the 16 X-STR loci examined are highly polymorphic in the Han population of Jining, providing useful information for forensic science and population genetics studies.</p>","PeriodicalId":50765,"journal":{"name":"Annals of Human Biology","volume":"50 1","pages":"351-355"},"PeriodicalIF":1.7,"publicationDate":"2023-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10158685","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Annals of Human Biology
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