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Preface. 前言。
4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-01-01 DOI: 10.1016/S0065-2660(25)00026-4
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引用次数: 0
Advances in energy balance & metabolism circuitry. 能量平衡与代谢电路的研究进展。
4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-01-01 Epub Date: 2025-03-06 DOI: 10.1016/bs.adgen.2025.02.003
Jose G Grajales-Reyes

Advancements in informatics, genetics, and neuroscience have greatly expanded our understanding of how the central nervous system (CNS) regulates energy balance and metabolism. This chapter explores the key neural circuits within the hypothalamus and brainstem that integrate behavioral and physiological processes to maintain metabolic homeostasis. It also examines the dynamic interplay between the CNS and peripheral organs, mediated through hormonal and neuronal signals, which fine-tune appetite, energy expenditure, and body weight. Furthermore, we highlight groundbreaking research that unveils molecular and cellular pathways governing energy regulation, representing a new frontier in addressing obesity and metabolic disorders. Innovative approaches, such as neurogenetic and neuromodulation techniques, are explored as promising strategies for improving weight management and metabolic health. By providing a comprehensive perspective on the mechanisms underlying energy balance, this chapter underscores the transformative potential of emerging therapeutic innovations.

信息学、遗传学和神经科学的进步极大地扩展了我们对中枢神经系统(CNS)如何调节能量平衡和代谢的理解。本章探讨了下丘脑和脑干内整合行为和生理过程以维持代谢稳态的关键神经回路。它还检查了中枢神经系统和周围器官之间的动态相互作用,通过激素和神经元信号介导,微调食欲,能量消耗和体重。此外,我们重点介绍了突破性的研究,揭示了控制能量调节的分子和细胞途径,代表了解决肥胖和代谢紊乱的新前沿。创新的方法,如神经遗传学和神经调节技术,被探索为改善体重管理和代谢健康的有前途的策略。通过提供能量平衡机制的综合视角,本章强调了新兴治疗创新的变革潜力。
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引用次数: 0
Disentangling the multi-omics layers of complex traits: Celiac disease as a model. 解开复杂特征的多组学层:作为模型的乳糜泻。
4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-01-01 Epub Date: 2025-08-08 DOI: 10.1016/bs.adgen.2025.07.001
Juliana Xavier de Miranda Cerqueira

The post-genomic era has ushered in a transformative shift in biomedical research, driven by the integration of multi-omics technologies and advanced computational tools. While genome-wide association studies (GWAS) have identified thousands of variants linked to complex traits and diseases, the majority of these lie in non-coding regions, where their functional roles remain elusive. This chapter explores how fine-mapping, functional genomics, and systems biology are converging to bridge this gap, moving from statistical associations to mechanistic insights. Using celiac disease as a model, we illustrate how genomic, transcriptomic, epigenomic, and proteomic data can be harmonized to identify causal variants, prioritize candidate genes, and map regulatory networks that drive disease pathogenesis. We highlight the power of fine-mapping in refining GWAS signals and the importance of integrating chromatin accessibility, QTL colocalization, and single-cell omics to contextualize genetic risk within specific cellular environments. The chapter also discusses the promise of polygenic risk scores, the role of metabolomics in capturing functional phenotypes, and the emergence of single-cell and spatial technologies in revealing disease heterogeneity. Despite these advances, challenges remain-including data heterogeneity, computational complexity, and the underrepresentation of non-European populations in genomic studies. Addressing these issues will be critical for ensuring the equity and clinical utility of precision medicine. Ultimately, this chapter underscores the transformative potential of translational genomics. By connecting genetic variation to molecular function and clinical outcome, multi-omics approaches are paving the way for more predictive, preventive, and personalized healthcare-particularly in the context of autoimmune and other complex diseases.

在多组学技术和先进计算工具的整合推动下,后基因组时代迎来了生物医学研究的变革。虽然全基因组关联研究(GWAS)已经确定了数千种与复杂性状和疾病相关的变异,但这些变异中的大多数位于非编码区,它们的功能作用仍然难以捉摸。本章探讨精细制图、功能基因组学和系统生物学如何融合以弥合这一差距,从统计关联转移到机制见解。以乳糜泻为模型,我们阐述了基因组学、转录组学、表观基因组学和蛋白质组学数据如何协调一致,以识别因果变异,优先考虑候选基因,并绘制驱动疾病发病机制的调控网络。我们强调精细定位在精炼GWAS信号中的作用,以及整合染色质可及性、QTL共定位和单细胞组学在特定细胞环境中遗传风险背景的重要性。本章还讨论了多基因风险评分的前景,代谢组学在捕获功能表型中的作用,以及单细胞和空间技术在揭示疾病异质性方面的出现。尽管取得了这些进展,但挑战依然存在,包括数据异质性、计算复杂性以及基因组研究中非欧洲人群的代表性不足。解决这些问题对于确保精准医疗的公平性和临床效用至关重要。最后,本章强调了转化基因组学的变革潜力。通过将遗传变异与分子功能和临床结果联系起来,多组学方法为更具预测性、预防性和个性化的医疗保健铺平了道路——特别是在自身免疫性疾病和其他复杂疾病的背景下。
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引用次数: 0
Parkinson's disease and metabolic disorders, understanding their shared co-morbidity through the autonomic nervous system. 帕金森氏病和代谢性疾病,通过自主神经系统了解它们的共同发病率。
4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-01-01 Epub Date: 2025-03-06 DOI: 10.1016/bs.adgen.2025.02.001
Thanh N Pham, Rebecca E Schelling, Ken H Loh

Parkinson's disease (PD) is a progressive neurodegenerative disorder characterized by motor and nonmotor dysfunctions. Its pathological hallmark is the aggregation of ɑ-synuclein in the central nervous system (CNS), leading to widespread loss of dopaminergic neurons in the substantia nigra (SN). Interestingly, metabolic disorders localized in the periphery, such as diabetes mellitus, frequently co-occur with PD. Emerging evidence highlights a bidirectional relationship: metabolic diseases may accelerate PD progression, while PD can exacerbate metabolic dysfunction. Beyond these associations, a growing body of research suggests that dysfunction in the peripheral nervous system, the primary communication bridge between the brain and peripheral organs, plays a critical role in these comorbidities. Autonomic nerve perturbation may accelerate dopaminergic neuronal loss in the SN and exacerbate metabolic dysregulation. This chapter synthesizes current evidence linking autonomic dysfunction with the progression of PD and related metabolic disorders, and it explores innovative therapeutic strategies leveraging this bidirectional relationship to address PD progression.

帕金森病(PD)是一种以运动和非运动功能障碍为特征的进行性神经退行性疾病。其病理特征是中枢神经系统(CNS)中突触核蛋白的聚集,导致黑质(SN)多巴胺能神经元的广泛丧失。有趣的是,周围的代谢性疾病,如糖尿病,经常与PD同时发生。新出现的证据强调了一种双向关系:代谢性疾病可能加速PD的进展,而PD可能加剧代谢功能障碍。除了这些关联之外,越来越多的研究表明,作为大脑和外周器官之间主要沟通桥梁的外周神经系统的功能障碍在这些合并症中起着关键作用。自主神经的扰动可能会加速SN中多巴胺能神经元的丢失,加剧代谢失调。本章综合了目前将自主神经功能障碍与帕金森病和相关代谢紊乱的进展联系起来的证据,并探索了利用这种双向关系来解决帕金森病进展的创新治疗策略。
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引用次数: 0
Neural mechanisms and health implications of food cravings during pregnancy. 怀孕期间食物渴望的神经机制和健康影响。
4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-01-01 Epub Date: 2025-01-31 DOI: 10.1016/bs.adgen.2024.12.002
Ayako Nakaki, Fàtima Crispi, Francesca Crovetto, Roberta Haddad-Tóvolli

Food cravings, an intense desire to consume specific foods, are a complex interplay of cognitive, emotional, behavioral, physiological, and cultural factors. Although prevalent across genders, food cravings are more frequent and intense in women, with hormonal fluctuations-particularly during the menstrual cycle and pregnancy-playing a significant role. Pregnancy, marked by profound hormonal and physiological shifts, often heightens cravings, likely as a response to the increased metabolic needs of both mother and fetus. However, the tendency to crave high-calorie, palatable foods during this time can lead to excessive weight gain, presenting potential risks to both maternal and fetal health. This chapter examines the neural mechanisms underlying altered eating behaviors during pregnancy and their role in triggering food cravings. We discuss the health implications of disrupted eating patterns in pregnancy, emphasizing the need for further research to advance understanding of female-specific neurobiology and to develop targeted interventions that support healthy eating behaviors, ultimately improving maternal and offspring health outcomes.

对食物的渴望是一种对特定食物的强烈渴望,是认知、情感、行为、生理和文化因素的复杂相互作用。尽管对食物的渴望在男女中都很普遍,但女性更频繁、更强烈,这与荷尔蒙波动有关——尤其是在月经周期和怀孕期间。怀孕期间,荷尔蒙和生理发生了深刻的变化,往往会增加对食物的渴望,这可能是对母亲和胎儿代谢需求增加的反应。然而,在这段时间里,渴望高热量、美味的食物的倾向会导致体重过度增加,对母亲和胎儿的健康都有潜在的风险。本章探讨了怀孕期间改变饮食行为的神经机制及其在触发食物渴望中的作用。我们讨论了怀孕期间饮食模式紊乱对健康的影响,强调需要进一步研究,以提高对女性特定神经生物学的理解,并制定有针对性的干预措施,支持健康的饮食行为,最终改善母亲和后代的健康结果。
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引用次数: 0
Interplay between the host genome, autoimmune disease and infection. 宿主基因组、自身免疫性疾病和感染之间的相互作用。
4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-01-01 Epub Date: 2025-03-07 DOI: 10.1016/bs.adgen.2025.02.006
María Isabel San-Martín, África Sanchiz, Nicolas Navasa

Throughout human history, pathogens have exerted great pressure on human genome that have defined susceptibility to both infectious and autoimmune diseases. This is possible because both type of conditions share susceptibility loci. The emergence of novel technologies that improves the genome analysis has greatly enhanced our ability to characterize in deeper the genetic architecture of human susceptibility to infectious diseases and autoimmune conditions. These genetic data sets identify outstanding informative overlaps that point to genetic modulation of immune function and inflammatory responses that affects both types of conditions. In this work, we revised single nucleotide polymorphisms and other genetic variations shared between these two categories of disease.

在整个人类历史中,病原体对人类基因组施加了巨大的压力,从而确定了对感染性和自身免疫性疾病的易感性。这是可能的,因为这两种情况都有相同的易感位点。改进基因组分析的新技术的出现极大地增强了我们更深入地表征人类对传染病和自身免疫性疾病易感性的遗传结构的能力。这些遗传数据集确定了突出的信息重叠,指出了影响两种类型疾病的免疫功能和炎症反应的遗传调节。在这项工作中,我们修订了单核苷酸多态性和这两类疾病之间共享的其他遗传变异。
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引用次数: 0
From metabolomics to energy balance physiology. 从代谢组学到能量平衡生理学。
4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-01-01 Epub Date: 2024-12-16 DOI: 10.1016/bs.adgen.2024.11.001
María José Ortuño Romero, Daxiang Na

Omics technologies are transforming our understanding of disease mechanisms and reshaping clinical practice. By enabling high-throughput, unbiased data collection at various molecular levels - including genes (genomics), mRNA (transcriptomics), proteins (proteomics), and metabolites (metabolomics) - omics approaches offer a comprehensive view of biological states in both health and disease. Among these, metabolomics has emerged as a pivotal tool, rapidly evolving beyond diagnostics to become a cutting-edge technique for pinpointing metabolites that regulate key physiological processes. This chapter reviews the advances in metabolomics, its integration with other omics approaches, and its applications, particularly emphasizing energy homeostasis. By incorporating metabolomic insights into physiology, we move closer to an integrative understanding of biological systems, laying the groundwork for novel therapies to combat obesity and related metabolic disorders.

组学技术正在改变我们对疾病机制的理解,重塑临床实践。通过在各种分子水平(包括基因(基因组学)、mRNA(转录组学)、蛋白质(蛋白质组学)和代谢物(代谢组学))上实现高通量、无偏倚的数据收集,组学方法提供了健康和疾病生物状态的全面视图。其中,代谢组学已经成为一种关键工具,迅速发展成为一种尖端技术,用于精确定位调节关键生理过程的代谢物。这一章回顾了代谢组学的进展,它与其他组学方法的整合,以及它的应用,特别强调能量稳态。通过将代谢组学的见解纳入生理学,我们更接近于对生物系统的综合理解,为对抗肥胖和相关代谢紊乱的新疗法奠定基础。
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引用次数: 0
Prader Willi syndrome: advances in genetics. Prader Willi综合征:遗传学进展。
4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-01-01 Epub Date: 2025-05-05 DOI: 10.1016/bs.adgen.2025.03.001
Suhani Hingar, Marc Schneeberger Pané, María José Ortuño Romero

Prader-Willi syndrome (PWS) is a complex genetic disorder arising from abnormalities on chromosome 15q11.2-q13, characterized by distinct physical, cognitive, and behavioral features that evolve across the lifespan. Early manifestations include severe hypotonia, feeding difficulties, and failure to thrive in infancy, progressing to hyperphagia, obesity, intellectual disabilities, and behavioral challenges in later stages. Additional features include growth hormone deficiency, short stature, delayed puberty, and other endocrine abnormalities. Genetic advances have illuminated the role of imprinted genes, such as SNORD116, in driving the syndrome's core features, offering insights into its variability and severity. Emerging research on targeted pathways, including oxytocin and ghrelin signaling, holds promise for innovative treatments addressing hyperphagia and behavioral symptoms. This chapter provides a comprehensive overview of PWS's clinical features, natural history, and molecular underpinnings, underscoring the importance of early diagnosis, multidisciplinary care, and precision medicine in optimizing outcomes and enhancing the quality of life for individuals with PWS.

普瑞德-威利综合征(PWS)是一种复杂的遗传疾病,由染色体15q11.2-q13异常引起,其特征是在整个生命周期中进化出独特的身体、认知和行为特征。早期表现包括婴儿期严重的张力不足、喂养困难和发育不良,后期发展为嗜食、肥胖、智力障碍和行为挑战。其他特征包括生长激素缺乏、身材矮小、青春期延迟和其他内分泌异常。遗传方面的进展已经阐明了印迹基因(如SNORD116)在驱动该综合征核心特征方面的作用,为了解其可变性和严重性提供了见解。包括催产素和胃饥饿素信号在内的靶向途径的新兴研究,为解决贪食和行为症状的创新治疗带来了希望。本章提供了PWS的临床特征、自然史和分子基础的全面概述,强调了早期诊断、多学科护理和精准医学在优化结果和提高PWS患者生活质量方面的重要性。
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引用次数: 0
Unraveling the interplay of genetic variants and epigenetic signatures in complex traits. 揭示复杂性状中遗传变异和表观遗传特征的相互作用。
4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-01-01 Epub Date: 2025-03-07 DOI: 10.1016/bs.adgen.2025.02.004
Lana Pacheco Franco-Gedda, Renato Heidor, Maria Aderuza Horst

Complex traits, characterized by their reliance on multiple genetic variants and intricate environmental influences, present a unique challenge in the field of genetics. At the core of complex traits lies the interaction between numerous genetic variants-often polygenic in nature-and their regulation through epigenetic mechanisms. These mechanisms, which include DNA methylation, histone modification, and non-coding RNA activity, play a crucial role in gene expression and can significantly influence phenotypic outcomes. By examining how genetic and epigenetic elements interact, we can gain insight into the biological processes that underlie variation in complex traits. Ultimately, this chapter seeks to provide a comprehensive framework for understanding the multifaceted relationships between genetic and epigenetic factors in complex traits. By unraveling these interactions, we hope to pave the way for future research that can inform strategies for improving health outcomes and clinical practices.

复杂性状依赖于多种遗传变异和复杂的环境影响,在遗传学领域提出了独特的挑战。复杂性状的核心是众多遗传变异(通常是多基因的)之间的相互作用,以及它们通过表观遗传机制的调控。这些机制包括DNA甲基化、组蛋白修饰和非编码RNA活性,它们在基因表达中起着至关重要的作用,并能显著影响表型结果。通过研究遗传和表观遗传因素如何相互作用,我们可以深入了解复杂性状变异背后的生物过程。最后,本章旨在为理解复杂性状中遗传和表观遗传因素之间的多方面关系提供一个全面的框架。通过揭示这些相互作用,我们希望为未来的研究铺平道路,为改善健康结果和临床实践提供信息。
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引用次数: 0
FAcTs on fire: Exploring thermogenesis. 着火的事实:探索生热作用。
4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-01-01 Epub Date: 2025-03-07 DOI: 10.1016/bs.adgen.2025.02.002
Amanda Rodríguez-Díaz, Carlos Diéguez, Miguel López, Óscar Freire-Agulleiro

Thermoregulation is a fundamental biological process that allows birds and mammals to maintain a stable internal temperature despite environmental fluctuations, a mechanism shaped by millions of years of evolution. Non-shivering thermogenesis (NST), primarily driven by brown adipose tissue (BAT), plays a central role in thermoregulation by not only helping maintain energy homeostasis but also influencing broader metabolic and physiological processes. Recent research has revealed that BAT thermogenesis is regulated by peripheral hormones and at a central level, with key hypothalamic energy-sensing pathways-such as AMP-activated protein kinase (AMPK) and endoplasmic reticulum (ER) stress-playing critical roles. Beyond its metabolic functions, BAT and NST have emerged as important contributors to tumor biology, offering novel therapeutic strategies for metabolic and oncological diseases. This review explores the intricate mechanisms underpinning NST, including UCP1-dependent thermogenesis and alternative pathways such as creatine cycling, calcium-dependent thermogenesis, and lipid cycling. Emerging evidence further highlights BAT's potential in to modulate tumor metabolism, with pharmacological and genetic approaches showing promise in reshaping the tumor microenvironment. This growing body of knowledge offers exciting prospects for targeting BAT thermogenesis in treating obesity and other metabolic diseases.

体温调节是一个基本的生物过程,使鸟类和哺乳动物能够在环境波动的情况下保持稳定的内部温度,这是一种经过数百万年进化形成的机制。非寒颤产热(NST)主要由棕色脂肪组织(BAT)驱动,在体温调节中发挥核心作用,不仅有助于维持能量稳态,而且影响更广泛的代谢和生理过程。最近的研究表明,BAT产热受外周激素和中枢水平的调节,下丘脑的关键能量感应通路-如amp活化蛋白激酶(AMPK)和内质网(ER)应激-起关键作用。除了它的代谢功能,BAT和NST已经成为肿瘤生物学的重要贡献者,为代谢和肿瘤疾病提供了新的治疗策略。这篇综述探讨了支持NST的复杂机制,包括ucp1依赖性产热和其他途径,如肌酸循环、钙依赖性产热和脂质循环。新出现的证据进一步强调了BAT调节肿瘤代谢的潜力,药理学和遗传学方法在重塑肿瘤微环境方面显示出希望。这一不断增长的知识体系为靶向BAT产热治疗肥胖和其他代谢疾病提供了令人兴奋的前景。
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引用次数: 0
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